CmaCh18G006330.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006330.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nuclear inhibitor of protein phosphatase 1
Location	Cma_Chr18 : 5757733 .. 5760536 (+)
Sequence length	1462

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCACTGAGGATGATTTACCACCACCTCCTGATCTGTCCGATGAGGAGGCTGTTGTTTCTTATAATACATTACTAAATCGCTTAGGTCTTACCAAATCTGGGTTACATTCATCATCTGAACATAGTAGCCCAGCAAGTGTAAAAGAAGAAAAACAGCGTGGGAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGAGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGTTTTTCAGATGGTGCAGATGTAGGGACAGAGCCTGGTCCTATGGGAGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAATCTCTTGTGCAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTCTTCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGACGACCTTTATGGAGAATCATTTTCAGGAAATGTGGGTATGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCCAAAGATTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATTTGTTTGGTAATTGATCACAATGAGCTGAATGATTGTGGAAGTCTGTAGTTTTCTGTCGTGACAAAAGGGTTGTTGATCAAGGCTACAGGAATTCTTTGCATATGGATGATTTTTTCCTTTTGAAATGTAACTGAGGACTTCAAGTTGATGCATTTCATCAGGAATTTTTCTTTGGTAGTTGGATGCCTTTCCAAGGGGTACGTGTAGAACTGATCATAATATTTGAAACTCTGGCTTCGCAAGTGTATACAGTAGAAATTGAGGAAATGAGAAGAATTAGTTTCATTGTAATTGTCAGACAGGCACACCACCGAAGCAAACGGGTGCATGTCGCCTGTATGGTCAGTCGTTGAGGCTGTTCTCGTGAAGGTTCACAACCCCCCTCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAATCCCTTTTCTCAATCTAGCCTAAAATAATAGTTCTTTTTGCATTGAGTTTGTCATCTATTGTTTGTAAGGTTCTGTTTGTTTTAACTTTAGGGATAATGAAAAGTGATCTATAGCAGGAAAAGAGATTCCAACACCATTTCCAAGTGAGAAAATGATTCAAGATTATTCCTAAGTTAGATGATTACTTTGGAATGAAAACACTGTCGTGCTACTGTTACTCTAGCAGATTCGAGTCGAGTTAAAGGGATAGCTTAATTATTACTTTTGCTTGGCTACTCACAAAAATGATTTTTGTGCTACTGTTACTCCTATATTATTCATTACATGAGAATGCTATATACAGGTATGCAGCTACATGCGTGGCTGGTCGAAAACGTCTGGTGATTCTCCTTTTTACAGAATGACAAGATTTGCCGGCTACAAAAGATATGAAGATCAGCAGCTGTTTATTCAAAAGCGTTGAGCTGAAAAGTTGTTTGGAGGATTCGATCAAAGATGGTTCCTGGAGTAAAATTATGGCAACTGTTAATTCTCGACGTCTTTGGCTTTACGAGTATGTCTTTACGAGGTAAGGTTATATCAAGCGTAGAAATTTGTAGTGATAAATATGGGTGCCAATGCTGTCTGGTTAAGAGTCCTCTATAAGAATGTAGTTAAAAGCTTGGAAAAACTGTGATATGCCTTGAGCAAGTGACACCCACTGAAAGACACGGTTCCTTTTGATACTTTTTTGAGTCTTTGTAGTATACCATCATAATGAGAGTGAAGTTTGACTATTCCCATTTGGTATACGTTTATATTGTCCTCTCTCTCTATTTTCTCTCTCTCTACCCAATTATTTAGATGCCTGTCCATGGAGTTTTTTATTTGATTCATGAATCTTTTACCATTACTACTATTTAACGTATTTGATATTATACTTTTGTGGAAAGTGTTATTGTTTTCAACGTTAAAAAAAACGTTCAAAAGTAGAGCAAAATGTTTACAAAGATAGTATATGATTTGGATATACTTCTAGGATATTGTGGCGGAAAAGATTAGGACAGGTAGCAATGATAAGAGAATCTCATTAAAAAACTGTAAAATTGATATGAGGTAATGATAGA

mRNA sequence

ATGCCCACTGAGGATGATTTACCACCACCTCCTGATCTGTCCGATGAGGAGGCTGTTGTTTCTTATAATACATTACTAAATCGCTTAGGTCTTACCAAATCTGGGTTACATTCATCATCTGAACATAGTAGCCCAGCAAGTGTAAAAGAAGAAAAACAGCGTGGGAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGAGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGTTTTTCAGATGGTGCAGATGTAGGGACAGAGCCTGGTCCTATGGGAGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAATCTCTTGTGCAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTCTTCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGACGACCTTTATGGAGAATCATTTTCAGGAAATGTGGGTATGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCCAAAGATTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATTTGTTTGGACTTCAAGTTGATGCATTTCATCAGGAATTTTTCTTTGGTAGTTGGATGCCTTTCCAAGGGGTATGCAGCTACATGCGTGGCTGGTCGAAAACGTCTGGTGATTCTCCTTTTTACAGAATGACAAGATTTGCCGGCTACAAAAGATATGAAGATCAGCAGCTGTTTATTCAAAAGCGTTGAGCTGAAAAGTTGTTTGGAGGATTCGATCAAAGATGGTTCCTGGAGTAAAATTATGGCAACTGTTAATTCTCGACGTCTTTGGCTTTACGAGTATGTCTTTACGAGGTAAGGTTATATCAAGCGTAGAAATTTGTAGTGATAAATATGGGTGCCAATGCTGTCTGGTTAAGAGTCCTCTATAAGAATGTAGTTAAAAGCTTGGAAAAACTGTGATATGCCTTGAGCAAGTGACACCCACTGAAAGACACGGTTCCTTTTGATACTTTTTTGAGTCTTTGTAGTATACCATCATAATGAGAGTGAAGTTTGACTATTCCCATTTGGTATACGTTTATATTGTCCTCTCTCTCTATTTTCTCTCTCTCTACCCAATTATTTAGATGCCTGTCCATGGAGTTTTTTATTTGATTCATGAATCTTTTACCATTACTACTATTTAACGTATTTGATATTATACTTTTGTGGAAAGTGTTATTGTTTTCAACGTTAAAAAAAACGTTCAAAAGTAGAGCAAAATGTTTACAAAGATAGTATATGATTTGGATATACTTCTAGGATATTGTGGCGGAAAAGATTAGGACAGGTAGCAATGATAAGAGAATCTCATTAAAAAACTGTAAAATTGATATGAGGTAATGATAGA

Coding sequence (CDS)

ATGCCCACTGAGGATGATTTACCACCACCTCCTGATCTGTCCGATGAGGAGGCTGTTGTTTCTTATAATACATTACTAAATCGCTTAGGTCTTACCAAATCTGGGTTACATTCATCATCTGAACATAGTAGCCCAGCAAGTGTAAAAGAAGAAAAACAGCGTGGGAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGAGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGTTTTTCAGATGGTGCAGATGTAGGGACAGAGCCTGGTCCTATGGGAGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAATCTCTTGTGCAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTCTTCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGACGACCTTTATGGAGAATCATTTTCAGGAAATGTGGGTATGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCCAAAGATTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATTTGTTTGGACTTCAAGTTGATGCATTTCATCAGGAATTTTTCTTTGGTAGTTGGATGCCTTTCCAAGGGGTATGCAGCTACATGCGTGGCTGGTCGAAAACGTCTGGTGATTCTCCTTTTTACAGAATGACAAGATTTGCCGGCTACAAAAGATATGAAGATCAGCAGCTGTTTATTCAAAAGCGTTGA

Protein sequence

MPTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEEKQRGRPTKKLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFGLQVDAFHQEFFFGSWMPFQGVCSYMRGWSKTSGDSPFYRMTRFAGYKRYEDQQLFIQKR

Homology

[Close]

BLAST of CmaCh18G006330.1 vs. TrEMBL
Match: A0A0A0LVY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170010 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.7e-88
Identity = 178/214 (83.18%), Postives = 188/214 (87.85%), Query Frame = 1


Query: 1   MPTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEEKQRGRPTKK 60
           +PTE DLPPPPD SDEEAVVSYNTLLNR GLTKS L SSSE SSPAS KE+ + GRPTKK
Sbjct: 216 LPTEVDLPPPPDPSDEEAVVSYNTLLNRYGLTKSRLPSSSEDSSPASAKEDTRHGRPTKK 275

Query: 61  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 120
           LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGP+GVKEGSLVGKYESLVQTTIIPKGKE
Sbjct: 276 LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE 335

Query: 121 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPS-TANN 180
            SSLRGDNIS KGVTGKLQEILNRVKNPSKS +YDDLYGESFSGNVG SWAYS + +AN 
Sbjct: 336 PSSLRGDNISPKGVTGKLQEILNRVKNPSKSGVYDDLYGESFSGNVGSSWAYSSAGSANK 395

Query: 181 PSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
            SSPPKDLI +    NHE +NRTN N+  DDLFG
Sbjct: 396 LSSPPKDLIPR----NHEENNRTNTNDSDDDLFG 425

[Close]

BLAST of CmaCh18G006330.1 vs. TrEMBL
Match: V4UGC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015322mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 134/215 (62.33%), Postives = 164/215 (76.28%), Query Frame = 1


Query: 3   TEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEE--KQRGRPTKK 62
           TE +LPPPPD SDEEAVV YNTL+NR GL+KS L   S   S +S+  +  +Q  R  K+
Sbjct: 214 TEINLPPPPDPSDEEAVVVYNTLINRYGLSKSDLICRSGEPSRSSIGRDDGQQPERAAKR 273

Query: 63  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 122
           ++K+RV+FRDQ GGELVEVVG SDGADVGTEPGP+G+KEGSLVGKYESLVQTT+IPK KE
Sbjct: 274 IKKLRVSFRDQAGGELVEVVGISDGADVGTEPGPIGMKEGSLVGKYESLVQTTVIPKCKE 333

Query: 123 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANNP 182
           + S + +N   KGVT KLQE+LN+VK+  KS IYDDLYG+SFSG VG SWAYS  ++  P
Sbjct: 334 KPSQKEENFLPKGVTDKLQEVLNKVKSGPKSGIYDDLYGDSFSGKVGSSWAYSSVSSTRP 393

Query: 183 SSPPKDLIGKASSGNHEV--DNRTNMNNDSDDLFG 214
           +SPP+D  GKA S + E   +N    +ND+DDLFG
Sbjct: 394 ASPPEDAEGKAISMSREKPGNNSLTYDNDNDDLFG 428

[Close]

BLAST of CmaCh18G006330.1 vs. TrEMBL
Match: A0A067GG68_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014194mg PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-61
Identity = 133/215 (61.86%), Postives = 163/215 (75.81%), Query Frame = 1


Query: 3   TEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEE--KQRGRPTKK 62
           TE +LPPPPD SDEEAVV YNTL+NR GL+KS L   S   S +S+  +  +Q  R  K+
Sbjct: 214 TEINLPPPPDPSDEEAVVVYNTLINRYGLSKSDLICRSGEPSRSSIGRDDGQQPERAAKR 273

Query: 63  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 122
           ++K+RV+FRDQ GGELVEVVG SDGADVGTEPGP+G+KEGSLVGKYESLVQTT+IPK KE
Sbjct: 274 IKKLRVSFRDQAGGELVEVVGISDGADVGTEPGPIGMKEGSLVGKYESLVQTTVIPKCKE 333

Query: 123 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANNP 182
           + S + +N   KGVT KLQE+LN+VK+  KS IYDDLYG+SFSG VG SWAYS  ++  P
Sbjct: 334 KPSQKEENFLPKGVTDKLQEVLNKVKSGPKSRIYDDLYGDSFSGKVGSSWAYSSVSSTRP 393

Query: 183 SSPPKDLIGKASSGNHEV--DNRTNMNNDSDDLFG 214
           +SPP+D  GK  S + E   +N    +ND+DDLFG
Sbjct: 394 ASPPEDAEGKTISMSREKPGNNSLTYDNDNDDLFG 428

[Close]

BLAST of CmaCh18G006330.1 vs. TrEMBL
Match: U5FPT3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00540g PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.5e-60
Identity = 135/218 (61.93%), Postives = 162/218 (74.31%), Query Frame = 1


Query: 2   PTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVK--EEKQRGRPTK 61
           P+E +LPPPPD SDEEAVV+YNT LNR GLTK    + S  SS +  +  +++Q GR  K
Sbjct: 179 PSEINLPPPPDPSDEEAVVAYNTFLNRYGLTKPDQPTKSSESSGSLSRRHDDQQLGRAAK 238

Query: 62  KLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGK 121
           +++K RVAFRDQ+GGELV+VVGFSDGADV TEPGP+GVKEGSLVGKYESLVQ T+IPKGK
Sbjct: 239 RIKKTRVAFRDQVGGELVQVVGFSDGADVETEPGPIGVKEGSLVGKYESLVQVTVIPKGK 298

Query: 122 EQSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAY-SPSTAN 181
           EQ S +  N S KGVT +LQE+LN+VK  +KS +YDDLYGESF+G VG SWAY S S+  
Sbjct: 299 EQFSAKEHNASQKGVTSRLQEVLNKVKTTTKSGMYDDLYGESFAGKVGSSWAYSSDSSVG 358

Query: 182 NPSSPPKDLIGKA---SSGNHEVDNRTNMNNDSDDLFG 214
           N +SP KD  G A    SG  E +     +ND DDLFG
Sbjct: 359 NLASPTKDGQGNAIGSLSGKPENNPSAYDDNDDDDLFG 396

[Close]

BLAST of CmaCh18G006330.1 vs. TrEMBL
Match: A0A151T726_CAJCA (Nuclear inhibitor of protein phosphatase 1 OS=Cajanus cajan GN=KK1_017368 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 132/214 (61.68%), Postives = 157/214 (73.36%), Query Frame = 1


Query: 2   PTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSS-EHSSPASVKEEK-QRGRPTK 61
           PTE + PPPPD SDEEAVV+YNTLLNR G+ K+ L S S E  S AS K++  Q  R  K
Sbjct: 179 PTEINFPPPPDPSDEEAVVAYNTLLNRYGINKADLVSKSGESGSSASGKDKDYQSERAAK 238

Query: 62  KLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGK 121
           ++RK RVAFRDQ+GGELVEVVG SDG DVGTEPGP+GVKEGSLVGKYESLVQ T+IPKGK
Sbjct: 239 RIRKTRVAFRDQVGGELVEVVGISDGVDVGTEPGPVGVKEGSLVGKYESLVQITVIPKGK 298

Query: 122 EQSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANN 181
           EQSS++  + S KGVT KLQE+L ++K P K+ IYDDLYGES S  VG SWAYSP+ + +
Sbjct: 299 EQSSVKEADSSPKGVTDKLQEVLKKIKTPVKTGIYDDLYGESLSVKVGSSWAYSPALSTS 358

Query: 182 PSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
             +P K+       G     NR  ++ D DDLFG
Sbjct: 359 ERAPDKE---DGEGGGKSDSNRNTVDGDDDDLFG 389

[Close]

BLAST of CmaCh18G006330.1 vs. TAIR10
Match: AT5G47790.1 (AT5G47790.1 SMAD/FHA domain-containing protein )

HSP 1 Score: 167.9 bits (424), Expect = 8.5e-42
Identity = 107/215 (49.77%), Postives = 134/215 (62.33%), Query Frame = 1


Query: 2   PTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEEKQRGRP--TK 61
           P E  LPPPPD SDEEAVV+YNTLLNR GL      S+ E       ++EK        K
Sbjct: 177 PAEIKLPPPPDASDEEAVVAYNTLLNRYGL------SNGESGGMLGKRKEKTGSEAGVAK 236

Query: 62  KLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGK 121
           +++K+RV+FRDQLGGEL E+VG SDGADV TEPGP+ VKEGSLVGKYESLV+ T+IPKGK
Sbjct: 237 RMKKVRVSFRDQLGGELAEIVGMSDGADVETEPGPINVKEGSLVGKYESLVRVTLIPKGK 296

Query: 122 EQSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLY-GESFSGNVGMSWAYSPSTAN 181
            +        +  GVT +LQE +N +K   K+ IYDDLY G+S +  VG SWA    + +
Sbjct: 297 VKEEKAFTGGTRGGVTDRLQEAMNMLKRGPKTGIYDDLYGGDSLAKAVGTSWA----SVS 356

Query: 182 NPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
            P++  +        G  E D       D+DDLFG
Sbjct: 357 QPAAETE------CGGVGEED-------DNDDLFG 368

[Close]

BLAST of CmaCh18G006330.1 vs. NCBI nr
Match: gi|449443484|ref|XP_004139507.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 9.6e-88
Identity = 178/214 (83.18%), Postives = 188/214 (87.85%), Query Frame = 1


Query: 1   MPTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEEKQRGRPTKK 60
           +PTE DLPPPPD SDEEAVVSYNTLLNR GLTKS L SSSE SSPAS KE+ + GRPTKK
Sbjct: 216 LPTEVDLPPPPDPSDEEAVVSYNTLLNRYGLTKSRLPSSSEDSSPASAKEDTRHGRPTKK 275

Query: 61  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 120
           LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGP+GVKEGSLVGKYESLVQTTIIPKGKE
Sbjct: 276 LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE 335

Query: 121 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPS-TANN 180
            SSLRGDNIS KGVTGKLQEILNRVKNPSKS +YDDLYGESFSGNVG SWAYS + +AN 
Sbjct: 336 PSSLRGDNISPKGVTGKLQEILNRVKNPSKSGVYDDLYGESFSGNVGSSWAYSSAGSANK 395

Query: 181 PSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
            SSPPKDLI +    NHE +NRTN N+  DDLFG
Sbjct: 396 LSSPPKDLIPR----NHEENNRTNTNDSDDDLFG 425

[Close]

BLAST of CmaCh18G006330.1 vs. NCBI nr
Match: gi|659118084|ref|XP_008458942.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 3.4e-85
Identity = 174/214 (81.31%), Postives = 186/214 (86.92%), Query Frame = 1


Query: 1   MPTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEEKQRGRPTKK 60
           +PTE DLPPPPD SDEEAVVSYNTLLNR GLTKSGL SSSE SSPAS KE+ + GRPTKK
Sbjct: 216 LPTEVDLPPPPDPSDEEAVVSYNTLLNRYGLTKSGLPSSSEDSSPASAKEDTRHGRPTKK 275

Query: 61  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 120
           LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGP+GVKEGSLVGKYESLVQTTIIPKGKE
Sbjct: 276 LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE 335

Query: 121 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPS-TANN 180
             SLRG+NIS KGVTGKLQEILNRVKNPSK+ +YDDLYGESFSGNVG SWAYS + +AN 
Sbjct: 336 PFSLRGENISPKGVTGKLQEILNRVKNPSKTGVYDDLYGESFSGNVGSSWAYSSAGSANR 395

Query: 181 PSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
            SSPPKDLI +      E +NRTN N+  DDLFG
Sbjct: 396 LSSPPKDLITRKL----EDNNRTNTNDSDDDLFG 425

[Close]

BLAST of CmaCh18G006330.1 vs. NCBI nr
Match: gi|567915361|ref|XP_006449994.1| (hypothetical protein CICLE_v10015322mg [Citrus clementina])

HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61
Identity = 134/215 (62.33%), Postives = 164/215 (76.28%), Query Frame = 1


Query: 3   TEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEE--KQRGRPTKK 62
           TE +LPPPPD SDEEAVV YNTL+NR GL+KS L   S   S +S+  +  +Q  R  K+
Sbjct: 214 TEINLPPPPDPSDEEAVVVYNTLINRYGLSKSDLICRSGEPSRSSIGRDDGQQPERAAKR 273

Query: 63  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 122
           ++K+RV+FRDQ GGELVEVVG SDGADVGTEPGP+G+KEGSLVGKYESLVQTT+IPK KE
Sbjct: 274 IKKLRVSFRDQAGGELVEVVGISDGADVGTEPGPIGMKEGSLVGKYESLVQTTVIPKCKE 333

Query: 123 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANNP 182
           + S + +N   KGVT KLQE+LN+VK+  KS IYDDLYG+SFSG VG SWAYS  ++  P
Sbjct: 334 KPSQKEENFLPKGVTDKLQEVLNKVKSGPKSGIYDDLYGDSFSGKVGSSWAYSSVSSTRP 393

Query: 183 SSPPKDLIGKASSGNHEV--DNRTNMNNDSDDLFG 214
           +SPP+D  GKA S + E   +N    +ND+DDLFG
Sbjct: 394 ASPPEDAEGKAISMSREKPGNNSLTYDNDNDDLFG 428

[Close]

BLAST of CmaCh18G006330.1 vs. NCBI nr
Match: gi|568825697|ref|XP_006467214.1| (PREDICTED: uncharacterized protein LOC102621149 [Citrus sinensis])

HSP 1 Score: 244.2 bits (622), Expect = 2.6e-61
Identity = 133/215 (61.86%), Postives = 163/215 (75.81%), Query Frame = 1


Query: 3   TEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSPASVKEE--KQRGRPTKK 62
           TE +LPPPPD SDEEAVV YNTL+NR GL+KS L   S   S +S+  +  +Q  R  K+
Sbjct: 214 TEINLPPPPDPSDEEAVVVYNTLINRYGLSKSDLICRSGEPSRSSIGRDDGQQPERAAKR 273

Query: 63  LRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGKE 122
           ++K+RV+FRDQ GGELVEVVG SDGADVGTEPGP+G+KEGSLVGKYESLVQTT+IPK KE
Sbjct: 274 IKKLRVSFRDQAGGELVEVVGISDGADVGTEPGPIGMKEGSLVGKYESLVQTTVIPKCKE 333

Query: 123 QSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAYSPSTANNP 182
           + S + +N   KGVT KLQE+LN+VK+  KS IYDDLYG+SFSG VG SWAYS  ++  P
Sbjct: 334 KPSQKEENFLPKGVTDKLQEVLNKVKSGPKSRIYDDLYGDSFSGKVGSSWAYSSVSSTRP 393

Query: 183 SSPPKDLIGKASSGNHEV--DNRTNMNNDSDDLFG 214
           +SPP+D  GK  S + E   +N    +ND+DDLFG
Sbjct: 394 ASPPEDAEGKTISMSREKPGNNSLTYDNDNDDLFG 428

[Close]

BLAST of CmaCh18G006330.1 vs. NCBI nr
Match: gi|694399416|ref|XP_009374837.1| (PREDICTED: uncharacterized protein LOC103963713 [Pyrus x bretschneideri])

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60
Identity = 135/216 (62.50%), Postives = 162/216 (75.00%), Query Frame = 1


Query: 2   PTEDDLPPPPDLSDEEAVVSYNTLLNRLGLTKSGLHSSSEHSSP-ASVKEEKQRG-RPTK 61
           P+E +LPPPPD SDE+AVV+YNTLLNR GLT   + + S  SS  A  K++ QR  RP+K
Sbjct: 207 PSEVNLPPPPDPSDEDAVVAYNTLLNRHGLTNPDVVAKSRESSDSAGAKQDNQRPERPSK 266

Query: 62  KLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPMGVKEGSLVGKYESLVQTTIIPKGK 121
           ++RK RV+FRDQ+GGELVEVVG SDG DV TEPGP+GVKEGSLVGKYESLVQ T+IPKGK
Sbjct: 267 RIRKARVSFRDQVGGELVEVVGISDGVDVETEPGPLGVKEGSLVGKYESLVQVTVIPKGK 326

Query: 122 EQSSLRGDNISSKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGMSWAY--SPSTA 181
           EQ  ++  N S KG+T KLQE+LNRVK   K  IYDDLYGESFSG VG SWAY  S  ++
Sbjct: 327 EQLYVKEGNSSQKGMTEKLQEVLNRVKTAPKGRIYDDLYGESFSGKVGSSWAYPSSVDSS 386

Query: 182 NNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDLFG 214
               SP +D  GKA S NH   N +++++D DDLFG
Sbjct: 387 GRRPSPSRDTDGKALSVNHGT-NSSHIDDDEDDLFG 421

The following BLAST results are available for this feature:

BLAST of CmaCh18G006330.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G006330.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVY0_CUCSA	6.7e-88	83.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170010 PE=4 SV=1	[more]
V4UGC4_9ROSI	1.1e-61	62.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015322mg PE=4 SV=1	[more]
A0A067GG68_CITSI	1.8e-61	61.86	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014194mg PE=4 SV=1	[more]
U5FPT3_POPTR	4.5e-60	61.93	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00540g PE=4 SV=1	[more]
A0A151T726_CAJCA	1.7e-59	61.68	Nuclear inhibitor of protein phosphatase 1 OS=Cajanus cajan GN=KK1_017368 PE=4 S...	[more]

BLAST of CmaCh18G006330.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47790.1	8.5e-42	49.77	SMAD/FHA domain-containing protein	[more]

BLAST of CmaCh18G006330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443484\|ref\|XP_004139507.1\|	9.6e-88	83.18	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis sativus]	[more]
gi\|659118084\|ref\|XP_008458942.1\|	3.4e-85	81.31	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis melo]	[more]
gi\|567915361\|ref\|XP_006449994.1\|	1.5e-61	62.33	hypothetical protein CICLE_v10015322mg [Citrus clementina]	[more]
gi\|568825697\|ref\|XP_006467214.1\|	2.6e-61	61.86	PREDICTED: uncharacterized protein LOC102621149 [Citrus sinensis]	[more]
gi\|694399416\|ref\|XP_009374837.1\|	2.2e-60	62.50	PREDICTED: uncharacterized protein LOC103963713 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G006330	CmaCh18G006330	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006330.1	CmaCh18G006330.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006330.1.exon.3	CmaCh18G006330.1.exon.3	exon
CmaCh18G006330.1.exon.2	CmaCh18G006330.1.exon.2	exon
CmaCh18G006330.1.exon.1	CmaCh18G006330.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006330.1.CDS.1	CmaCh18G006330.1.CDS.1	CDS
CmaCh18G006330.1.CDS.2	CmaCh18G006330.1.CDS.2	CDS
CmaCh18G006330.1.CDS.3	CmaCh18G006330.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G006330.1.three_prime_UTR.1	CmaCh18G006330.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	coord: 1..212 score: 6.9
None	No IPR available	PANTHER	PTHR23308:SF33	SUBFAMILY NOT NAMED	coord: 1..212 score: 6.9