CmaCh18G005860.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G005860.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Extracellular ligand-gated ion channel
Location	Cma_Chr18 : 4120728 .. 4134997 (-)
Sequence length	1286

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCGGAATCGGAATCGGAATCGGAATCGGATTCCGCCGAATTGCGGAGGTTCGAATCGTTTCTGAAATGGATTTGCATAATGGATCACTCAAATCCGTTCACCGCAACGCTGTCCTGCTTCCTGTTCTCCGCCTTCGCGATCGCCGTCCCGATCGCATCGCACTTCGCCCTTTCTTGCTCCGATTGCGACGAAGATCATCGAAGGCCTTTCCATGTGGTCGTTCAGCTCTCTCTCTCCGCCGTTGCGACGCTCTCTTTCGGTTGCCTCTCCGCCTGGCTCCGCCACTTCGGATTGAGCCGATTTCTGTTCCTGGATAAGCTCTGTGAATCCAGCCACAAGGCTCGCGATGAATACTCCAAGCAATTAAAGGTCCGTTCCCTTTCTCTTTTCCTCACCATTTCCAATTTTCTCTCAACATTTTCTTCATTTTTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTATTATTATTTAAACACTTTTTTTTTTATATATATAAAAAAAAGTGAAAGTTAAAAATACCGTTAGGAATCACGATCATGCACAATGGTATGATAGTGTGGTCTCATACCAATGGAGATGTATTCGTACACCATAGAGCTTCAATTAGTGTGTATTGGACTCCCTCCCAACAATCCTTGAATAACCTTCTCTTAATCAAGACTCGACTCTTTTCTCAGAGTCCTCGAGCAAAATACACTTTTTGTTTGACACATGAGTCATTTTTTACTATACCTTCGAAACTCACAACTTATTTATTCGACATTTGAGGATTCTATTGATATAGCTAAATTAAGGGCATGACTCTGATAGAAATTACGACCCTCTACAATAATATGAAATTGTCCCTTTAAATGTAAGGCTTTATATTATGATGTATTCCCTTAAATAGGGGAGGCGGAAACTTATAATTTGAAAAGAGAATATTTTGGGAAATATATATATATATATAAATAAATAAATAAATAAAGAAAGGGGTTAATTATTTGGTTTTAAAGTTTTAAAAGGACACTTTTAATTATTGAATTTTAATAAATGATTTTAAATGTTTGCATAACTAGTTTGTTAGTTGTCCAATCACTAATTATAATATTAAATTAATATATTTTTCCAATTAATAAAACAAGTCAAGTGTTTTAAGAGTAAAATAATGGATGAATTTGTGCAGTTTTGACTTAATAATATTTTTAAAATTTTAAAAATATCTTTGAACTTTTGACATTTTAAAAAAATATTTTTAGATATTTTTGAACAGGTATTTATAAAATTAAGTATTAATAGTTTTAATTCAAAACTAACCTTAAGGAAACTTTAATTTTTTTTTTTTGTTTTGAAATTTTAAAGTATTTTTAAATAAAAAAAAAAGTACATTTAAATTTTAATCAATTTAATACTTTTACAAATTAGGTGTTACTTGTATCAAAACAATTTATAAACCTAGATGTTAAAATAGTTTTTGTTTTGTTTATAATAGGTTCATTTAATTTAGATTTCACCTAACATTCGTTCTAGAAATCTTCAGTTAAAAAAATAATAAAAACAATCAAAAAACACCTTATTGTTAAGTTTTTATTATTAAAATAACTTTAGTGTACAAATCATATCCTAGAAATAAATGTAGTTTTTTATTACGTGGATGAGGAGTGAAAGAGAAGGTGTAAGTTTTCTTCAATATTTTATTATTATTTTTTAAATTACAAGCAAAGGTTATGGTATAGATTTTAGGGTTTTGGAGATTGTTAGATCTTTAATCCAAGGAGGTGGGAGTTAATAAGTTTGACTTAGCCAGAGTAATTATTAACTTAGACCAATTTTAGGATAATGGTGAGTAGTTATTAAGAAAATTTTGTGTTTTTGTTTAGGAGGATTATTAATAGTTGCTAGATAAAATTTAGGAAATTTGTTAGTATTTTCTCCCTTATAAACAGTGTTAAGATATATGTTTTATTTGCAACAACAAAGAGAATTGAGACACATAGTGCTTAAGGTTTTTCGGTTCCAAGAAACTCTATCTCAAGTTGTTTTTTCTACTTTATTTGTTTCGACATATTTCGATCATGGCTCAAAACCAATATTTGGTATCGGAGTTAGGATGCCCAAACAAATGTCATCACCGTAAGAGTCACCGGAGTAGATATGATGATGATAAAAATTGGAAAGGAGGAGAGTGTATTGCTCCAATATCCATTACTCAAAAAGAGTAACTACGCAACATGATTGATAAAAATGCGTGTTAACTTACGGTAAAAGGCGTGTGGGACACCATCGAGCATGGTGACGACATTTTGGAGCGTAAGGACAGGATGACTCTTACTGCCATCTACCAACTAGTTTCGGAGGACGTCCTTCTCATGTTGGCAAGAGAAGGACTCGACAAAGGCAATGTGAGAGTTGCTACAAACAATGCATGTGGGTGTGAACGTGTCAAGGAAGCAAAGGTGCCGACCTTGAAGAGTGAGTTCAAGACTATCCGCATGAAGAACGGTGAGTCAATAGACAACATTGTCATGAAGTTGACGACCATTGCCAGAGACATCCATTTGCTAGGTGACAAGGTGAAGGGAATCTTCCTTGTTAAGCAGTTCCTTCGAGATGTCCCCCTGAGATTCATGTAAATTGTTACCTCCATTGAGCAGTTTGGCGACCTTAAGAATATGTTGGTTGAGGAGGTCGATAGTCGTCTTAAGTCCATGAGCAGAGACTTCGTGGCTACAACGACAAAGAGGAGAAGAAAAATCTGTTTCTGACACATGAGGAGTGGTTTCATGGACGAAAAGGAAATATGAGGCTCATTCTTCCTTTTCAGGTACGAAAGAATATAGTGGCCACAACAAGGAAAGTAGACATTGTGGGTATAGTCGTAGACGTGATGGTAGAGGGGGTCATGACAATATCTTACAAACCCATGAAAATGCCAACCCCTGAAATAACAAGAGTATGGTTAAGTTTATGCTTGTAGAAAATACGAGCATTATGCGGTAGAGTGCTACAACAAGTTGCATAATGAAGAGACAAACCTCATAGTCATGGATAATGAAGAGCCTGCATTGATGTTGGCTGCAAAAATACCCAACCTGTGGTTCTCAATGAAGAGAAGGTTATGGCGAATCTCCTCGTAGATGGAGAAGACCAAGTGGTGACAAAGATGTGGTACCTAGACAATGGAGCGAACAACCACATGATGAAAGCTTGAATAAAGTTCAAGGAACATGACGAGAAGTTCATTGGAAACGTGAAGTTTTGCGACAGATCCATTGTACCGATCTAAGACAAAGAATCCATCTTGTTCTAGTGTAAGAATAGCGATCAATGTCTATTGACCAAGGTATATTACATCCCGAGTTTGAAGAGAAATATTATTAACCTTGGTCAAATGATAGAATAAGGTAGCAAAATGGAGTTAGTCGGCTTGTTCCTCAAGATATTTGACAGAAACAGAGCCTTGTTGATGAAGGTAAATGGTAGCAAAACAACATGATACTGATGAAAGACCACAAAATCTTCAGTATCCATTGGTGTTAGTGGTCGAAAAAAGAAGAAGTGTGATTTAATAAGCTTCACTTAGCAAAAGAAGTAATTAACCTAAGCAATTTGAGGATAGTTGTTTAGAAGTGATTGGGTTTAGAGAAATTGTTAGTAGGAATATTTGTTACCAGTGTTTAAATTGAGGAGAAAGTTTAGAACTTGGGGGAGAAAGTTTAGGAGATCGGTTGTGCTTTCTCCACTATAAATATTGATGAGATTATGCTATTTTCACAACAACAAATAGAATTGAAAAGCATAAGTGTAATGTTGAATTGAAAAGCATAAGTGTATAAGGTTTCTTTTGTTAGATAAAACTTGAGGTTTTCTTATTTAGATTTACATTTGTATTAGTTGATTGAATATCTTTGTTTGACCATTTGACAAATAAGGCAAATGGGTTACCAAATTTTTAATATCTTTATTTGACCATTTGACAAACAAGTCGAGGATTACCAAATTTTTAGATGGCCATTTTGTAAGAATAGCACAGATTTAGTTGGCCAATCTCAATCTTGTGTCGATAAGTTAAATATTTAAACAGTGAATAGAAATAGATCATCACCTCATTTTAAGCAAAAGTCTTCTGCAATTCTCCCTCTCTGTTATTTTTTGCATTTTTATTTTCTTCCAACAACTTCCAGTTAAACGATTTCCTCTCACCGAAAATGATTTCACTTGAAGCCATCGTTGTATATCATTGTGGATGAGCCAATCTTATCAACAATCAATTTGAATAGCTCAAGTGGTTAGAGTGTCGACCTAACAACACCATATGTTTTAGGTTCGAGTAGAAGAAAATGCAAAGCATGAAAATACACACATCGTGGGGTCCATCCCGAGTAGGCTCTCTCACTCCTCCACGTTGCCGTCGCATTGTAAAACCTGAGGGACATACCACAGGTTTTAGGAGGAGATTGTTAGATAAAACCTAAGGTTTCTTTATTTAGCTTTACACGTTTCTATTAGTTGACGTTTCTATTAGTTGACGTTTCTATTAGTTGATTGAATATCTTTGTTTGACCATTTGACAAACACGTCGAATGTTTTAGGATAAGTTAAATATTTAAAGAGTGAATCTGTTCATAAATAGATCATCACCTCATTTTAAGCAAAAGTCTTCTGCAATTCTCTCTCTCTGTTATTTTTTGCATTTTTTATTTTCTTCCAACAACTTCACGTCAAACGATTTTCTCTCACCGAAAAGGATTTCACTTGCCGATTATCCTTGCCGATTGTCGAAAAACAACATCTTTGTTCCAAAAGCTCTCTCCCCTCGAGTTGATTTTCTGCTTTAGTTATTTGTTTCAACATATTTCGATCGTGGACCATTTCTAAAATTTGGTATTAGAGCTCCTAGGATGCCGAAAAAAATGTTGTCACCATACAAAGTCACCGGAGAAGTAACAACAATAAAGAGCGGAAAGGAGGAGAGTGTAACGCTCCAGTACTTGTTACTCACAAAGAGTAACTACGCAGCATGGTCGATAACGATAAGTGTTAACTTACAGGCACAAGGCGTATGGGACGTCATTTAACATGGTGACATTGAGGAGTGTAAAGATAGGATGGCTCTTGCCACCATCTACCAAGTAGTCTCGGAGGACGTTCTTCTCATGTTGGCAAAGAAGGGCTCGACAAAGGCAACGTGGGAGACGCTGCAAACAATGCATGTGGGTGTGGAATGTGTCAAGGAAGCAAAGGTGCATACCTTGAGGAGTGAATTCGAGGCTATCCCCATGAAGGACGGTGAGTCAATAGACGACTTTTCCATGAAGTTGACGATGATTGTTAGCAACATCTATTCATTAGGCGATGTGATGGAGGAGATCTCTGTCTTAAGGTCCATGAGGAGAGACTTTGTGGCTATGAAGATAAAGAGGAGGAGAAATACCTTTTACTCACACATGAGGAGTTTCTCGCACGGACAAAAAAGAAAGATGCAGATGACTCTTCTTTTTCAGGTACAAACGAACGTGGCAACCATAACAAAGAAAAAAGAGGTTGTGGACGTGGTGGCAGAGGAGGTCGTGACAATACCTCACAAACCCATGAAAATACCGACCCTCGAAAGGACAAGAGTATGATCAAGTGTTACTCTTGTGGAAAATATGGGCATTATGCGGCAGAGTGCTGCAATAAGGAGCTCAACGAGGAGGCAAATCTCACGTTCTCGGATGATGAAGAGCCCACACAAATGTTGGCCGAGAAAATGCCCAACCTGTTGATTCTCAATGAAGAGAAGGTTATGGCAAACCCCTTCATAGATTGAGAAGACCAAGTGGAGACCAACATATGGCACTTAGACAACGGAGTGAGCAACCACATGACCGGAGATCCAGGAAAGTTCAAAGAACTTGATGAGAAGTTTATTGGGAACATGAAGGTTTGCAACGGATCAATTGTATCGATCTCAGGAAAAGGATCTATCTTATTTCAGTGTAAGAACGACGATCAACATCTATTGGCCAAGGTGTATTACATCCTGAGTTTGAAGAACAATATTATTAGACTTGGTCAAATGACAGAAGAAGGTAGCAGAGTGGAGATAGTCGATCCGTTCCTCAAGATATACGACCGAAACGGAGAGCTGTTGATGAAGGTAAGATACTATTGAAAAACTATCAACATCTTCTAAAAGTATCTATTGACGTTGACAACAAGAAAGTGAAGAAGAAACCAATGAGTCAGGAGAAAAAAGAACTGAAAAATAATCCAAGAAGTAACCAGAGGCTGCTTCAATCAGCGGAGTGCAACCTACAAGTCGATGTGTTTCATTAGACTTATCTTCTCAACCAAAGAAGCCTATAGGCATGCCTAAAAAGAAGTTAAAAAAATAGAGGAGTACATTATAAAAAGTTTTTACATGTAAGCTTGATGAAGAGTGGAAGAAATTGCATGTTGTAGAATTAAAATTTCTTCTGAAGAAGACAAATTTGATCAAAGACCTAGTAAAGTTGACACTAGAAAGCAACGTGTAGACATTCTAACTAAGACCTTAAAAATTTACAGACATGCGAGAGTTTCACGTAGTGAAGAATCTCGAGAAAAAGTAAAGCTTACGAAAAAAAATATAAGTCAATAAGCATGACTTAGCAAAATAAGTTATAATGTGAAGTAATTTTAGGATAATTATTAGTAGCTCTTAAATTGAGCAAATTTAAGAAAATTGTTAGTATTTTGTTTAGGAGAATTTTTAATAGTTGCTAACTTTGTGGAGAAAGTTTAAGAAATTTAGAGTGTTTTCTCCCTATAAATAGTTTTAGATGTATGCTTTATTCAGTACAACATAATCTAGTTTATTTATTCACTACAACATAAACAATTGAAAAACATATCGCTTAAGGTTCTTGTTAAGGATATTTAATACTAAATTATAGTTTACTATTTATATCATATTTGATATTTTATTATAAGGTAAATATCTAGCTTCTTACATAAGTATCTTTCCATTTATTGTTATTTCCATTTATTACTCTTTCCATATCCTTGTAATTTGTTTGATTATAAAAAGATAACTTTCACAACATTTAGGCGGGTGGATGAAGCAAACATTGTATCAGAACCCCTTTAGTTTAACCACCTGATCCCTTATTTTCAATGACTAATGAATCCCCTACTCATCTTCTTCTCCACCACCCCTACTGGCTTTGAGGCAGCAGGAGAAGTCTCCATGGCTGCTACAAATGGAGTCGATTGATTACTCTTCGACTCCACCCTTTTGACCTCCAAATCACCCTTCGCCATGCTCTGTACATACAACCTCACCTTCTCTAACACAATCGGTTTCCTCTTAGCTAACAATACCTCTCTCATTTTCTTCTCAATCAACCCTTCATCCTTCACAGAAACCCTAATCTCAGGATTCTCATCAGCGTTCTCTTCAGAAATACACGGAATCTCTACAAACCCATCAACCTCCTACAAAGATTGCAATCTGGGCGCCACACTGGCCTCTTCTGACAGAAAAAAATAACAGAAGGGGAGAAAAGCAAAGACACTCAAATTAATTTTCTTCTTTTTGTGGAGTTTTGAGAACTTCACACCATTTTCCTTATATAATGAAAATTTACACATTTCTGCTACAAATCAAGAAGCACTCCACCACTCCTTCCACTCCTTCTACTGTTCCACTCCCTTAAAACTAGTTCCACTACTTCCATTATCTCCCTTTGTTCATGAATAAATAAGCAACAAAAAAATAAAATAAATACTAACGACTATTTTTTTTTGTTATTTTTTTCAAAAAAAAAAAAAAAAAAAAAACACTTATATGAAGCAAAATAAAAAAACAAGTTTATAACCAACAATCACTCCTCTAAACTTGTTTAACTATGTTGAATGACTTTCTTCAAGCCAATCTTCTCTCTTAACTCCAGGAACCGTTGTCTTGCTAACGGCTTTGTCAGAATTCTGCCAACTGTTCATCTGTGTCCACATATTCCAATTCAATAGCTTCAGTTTGTACACATTGGCGAATAAAGTGGAACATGGTATCAATGTGCTTACTTCAATCATGGTAAACAGGATTTTTCGCCAACGCTATAGCTGACTTGTTGTCAACATTAAACTTGGGTTTTACTTGCAGTTGACTGATGTTACTCAAAATCCTACCCAACAATACTCCTTGACACGTTCCAGCAGTTGCAGCTATATACTTAGCCTCGCATGATGACAAAGCCACCAGCTTCTGCTTCTGTGATATCCAGGTTATTGGATTTACTCCCAAATAGTACAACACTCTAGTTGTACTCTTCCTATCATCAATATCCTCAGCCATATCACTGTCGCTATATCCTACTAGCTCTACATTCGATAGCTTCTTATAAACATAGCCAAAACTTAGAGTACCTTTCACATACCTCAATATTTGTTTTACTGCTGTGAGATGTGACGTTGTTGGTGCCTCCATGTATCTACTCATCACACCAACTGAGTAGGCTATGTCGGGTCGGGTATTAACCAGATAGCGTAAGCTTCCAATAACACTTCTGTAAAGTGTTTTGTCAACCGCAGGTTCTCCATTCCCATGTTTGCTCATCTTCATTCTTGGTTCCATGGGAATCGAACAAGGATTGCACTCCCCCATTCCTAACTTCTCTATGATTTTTCTTGCATATCCGGCCTGACATAAAGTGATTGATTCATTGCTTTGTCGTACCTCAATACTCAAGTAATAGCTCAAAAGTCCAAGATCGCTCATCACAAATTTCTAGTGCATCTCTTCCTTGAACTGAGGTATAACTTATTTGTTTGAGCCGACTATGATTAAGTCATCCATATATGTGCCGATTATCATTGCTTTAACTCCATTAATTTTCTTGTAGAGAGCATATTCCTGTGGACATCTAACAGAACCAAGTGACTGCAAACATTGATCGAGTTTAACATTCCAGGCCCTCGGAGCATGTTTTAATCCATACAAGGCTTTACGTAGTTTTAACCCCATGTTTGGATTTTCCTTGTCAACGAACCCTTATGGTTAACAACATACACCTCCTCTTCTAATTCGCCATTCAGAAAAGCTGTCTTTACATCCATGTGATGTACTTCCCAGTTCCTGAATGGCTGCATAGGCAAGAATTAATCTCACTGTTTCTAACCTAACCACTGATGCGAATACTTCACTGTAATCTACACCAAATTGCTGTGCATATCCCTTTGCCAAGAGTCTCGCCTTATGTTTCATGATTTCTCCATCTGGATTTTTCTTTAATTTGAAAATCTATTTGATGCCGATTGCTTTGTGATTCTTCGGCAAATCTGTGAGTTCCTATGTTCTGTTCCTTTCAATGGAGAGAATTTCAGACTTCATGGTATTCCTACAGTTTTCATTCTTAGCATCTTTCTCATATGAGGTTGGCTCCTCTATAGAAAGAAAACAAAGGTCCACTGCTTCGTTCAGTTCTCTATAAATATCTTCTAGAGACCTGAATTTTTTCAGCATCGATGAGCTTGACAATGATGCATTGAGGTACTGTCTAGCGTTGATAAAGTTGAGGACGAATTTTCCCTTTGTCTTTCATCTAGATCAACTTCGATTTGTTCAATATTCCTCTCCTCTGTTCTACTCTGTTTTTCTGAAATTTGAACGGTGAAAGTTCCTTTTTGAACGGTTTCTTCCCAACACCACTTTTTCTCCTCTTCGAACAACACATCCCTGCTCACCATAATTCTGTCCTTTTGTGGATCTAATAGTTTGTAAGTTTTGGTTCCATCTTCATATCCCAACATAACTGTCTTCACACTTCTATCAGCAAGTTTAGGAAGGTGTGAATATGTATTCTTGGCTTAAGCAAGACATCCAAAGATTTTAAAGTGACGAACCTTTGGTATCTTGTCAAATCAAGCTTGATACGGTGTACCATATGCAACTCCTTTTGTTGGCGATCTGTTCAGAATATACACGATAGTTTTGATAGCTTCTCCCCAAAATTTTGGGGGCATCTCTTTGCTCTTTAACATACATCTGGCCATCTTTACCACCGTTCGATTACGCCTTACTACTACACCATTTTGCTGTGGTGAAAATGGTGCAGTAAGAAGTCTCTTCATGCCTTCATTCTCGCAATAGTCTTTAAAAGCAGTAGATATGAACTCTCATCCACGGTCCGTTCTAAAGCTTTTAATCTTCTTGCCTTTCTCTACCTCCACACTGATCTTGAACTTTTTAAATACCACCAGTGTTTCATTCGTGTTTTTCAACATAAACACCCACATAAATTGTGAAAAATCATCCACTAGTAACATAAAATATCTGTTACCTCCATAAGTCATTGGCAAAATAGGTCCACATAGATCTCCATGGACAAGATCCAATGATTCCTTTGCACGATATGTTATTGTTCGGGGAAAAGGAGTTCTATGCTGCTTTCCAATTAAACACCCATCACAAAATTGATTGACTTGGGTGATTTTCGGCAACCCTTCAACCATTTTGTGGTCATTTAATTGCTTTAAAGAGTGAAAATTCAGGTGTCCATACCTCGCATGCCAGAGCCAACCACCTTTACTGATATTTGTCATTAAACACACCTAATCTAACTTCAGCTTTGATACATACAATTTGTTGGATTGTCTAGTCACCATAATAATCAGGCTCCTAGCCCTGTCATATATCTTCATCACACTATCCTCTATGACAATTTTATTTCCACTCTCATCTAGTTGTCCCAAACTTATATTGCTTTTGAGTTTAGGTATGTAATAGATTTGCGATAAGATCAAGTGCTCATCGGTTTTTCATTTGAAGAGCACTATTCCTCAACCACAAATGTCTATTACAGAGTTATCACCGAAGCGTACCTTTCCAACAACAGATGTGTCGAGCTCACGAAACACCCTCCTTTCTCCTAACATGTGGTTGTTTGCTCCAGTATCTAGGAACAAGGAATTTTCAACTCCAATATTGGCTGGTGGCGGCACTATAGTTTCATTCAACATCACAAAATTAGGCTCTTTGTCATGTGTGGTTTTAATTTCACACGCCTCTATCATCAGCAATGAAGACTCCTCATCCTTTTGCATCTCTATCAAATTGAGTTGTTCGTCTTTTGTGGAACACTCTGATGCGAAGTGTCCCATTTGCTGACACCTGTAACATTTAATTTTACTTTTGTCAAATTTCTTTTTTTGAGTTTGCGAATCTCCTTCATCTCCTTGATGCCAGTCACTTCTCCCATGACCTCTCCATCTTCCATGACCCCGTCCATTGCCTCCTCTGGAGCTGCCTTGATCCTTCCATTCTTTCTTTGGGGATTTTGCATTCTCTCGTTCCTTCCATTCTACATGAGTGAGGAGAACGGTTTCATCTTTTTCTCCAAACCCTTGCAACCTTTCTTCATGTGCCTTGAGTGATCCAATAATCTCATCAACGGAGTTTGTTTTGAGATCACTGAACTCCTCAATCGTTGAAGTGATTTGAAGAAACTTTGCAGAGGTGGATCGTAGAAGTTTCTTAACTACTTGGATATCATCCACAGTATTGCCGAGGCCTCTCAATTTGTTGACAATAATGGTGAGTTTTCCAGAATACTCATCAATACTTTATGAATCACCCATTCTCAATGCTTCAAACTCCCGCCAGAGAGTCTGCGTTCTAACTTCTTTCACTCTTTCCGCACCTAGATTCATATTTTTCAACATGATCCTGGCTTCCTTGGCCGTTTTCTTGGCACCCAACTGTAGCAACGTATCTTCTCCAATACTTTGATAAATAGCTGCTAAAGCCATCTTATCTTTGCGGTTATCTACTGTTTCGGGTGACTCAATTGCTTCCCAAACACCTTGTGCCATCATAAATACCTCCATCTTAATCGCCGAAGCAGCATAGTTGCATTTTGTCAACATCGGGTATTTGAGTGTGACAGATCCCTCCTTTTCTTGAAACCATACACTCACTTCATGTGAGGCATCACCTTCTATAGCACCGGTGTTTTGGCTCCTGTCACTCGATTCCTGTCTCATTTTTTATCTCTCCCTTCCTGACCGCTCAATCTCTAGGTGAGACATGATTGAAAACAGGCCTTGATCTTGTAGCTCTGATACCAATTGACAGGAAAAAAAAAATATCAGAAAGGGAGAAGAAGCAAAGACACACAAATTAATTTTCTTCTTCTGGTGGTGTTTTGAGAACTTGAAACCATTTTCCTTATATAATGAAAATTTACACATTTCTGCTACAAACAAATTAGTAAGCACTCCACCACTCCTTCTACTATTTCACTCCCTTAAAACTAGTTCCACTACTTCCAATATCTCTTTTCTTTCATGGAGAAATAAGCAACAAAAAATAAAATAAATACTAACAGCTATTTTTTTTTTAACAAAAAAAAACTTATGAAGCAAAATAAAATAACAAGTTTATAACCAACATCTTCGCCAACCAAGTCGACGCCGCCCTTCTCGCCAAAATTGGCTCTTTCGCTTACTGTGGCGACTCTTCCGACTTCAACATTATCTTTGTTCCTTGCTCTAAGTTTCTCCTTCTACTTCTTGGGTTGGACATATTCTCACTAGAGCCAAGGCAGATCCCTCTTCATGGGTTAGACATATTCTCTTAATATATTTTTTTATTATAAATAGATAATTTTCACACACCATTTACCTGTGCTGGATTAAGCAAAACATTCTAAGTTCTTTTTACTCAAGTTGTTCTTTTTGCTCTTTTATTTGTTTCGGCATATTTCAATTTACATACATGTAGATCATGTTTGTGTTTGGCATTTGTAAATTGTTTTATGAATGTAATTGCAGAGATCAATGGAGCTGATCTCCTTCTTCTTGCTGCCATGTTTCATGGCGGAAGCAGCCTACAAAATCTGGTGGTACGTCTCAGCAGCCTACGAAATACCATACTACGGCAACATGTACCTTAGTTACATCACCTCCTGCACCTTAGAGCTCTTCTCATGGCTTTACAGAACTTCCATCTTCTTCTTCGTCTGTATTCTCTTCCGCCTCGTCTGCCGCCTCCAAATGATCCGACTCGAAGACTTCGTTTCCGTTTTCCATCGCGAAAGCGACGTCGGCACCATCTTGATGCAGCATTTGGGCCTTAGAAGAACCTTGACCATCATCAGCCATCGCTTCAGAGTGTTCATGTTCTTGTCTTTGATTTTGGTCACTGCCAGTCAGTTCATCTTTCTTTTGATGACTACTAGATCACATGCTCTTGCTAACCTCTCAAAAACTGGACAACTTGCGGTAATCAAATTCCTTAACTCATCTCTTTCTCTTCTATGTTGGTTAAAAAGCTATGAGTTTTGAATATGCAGCTATGTTCCATAAGCCTAGTGACTGGCTTGTTCATATGCCTCCGTAGTGCTGCAAAGATCTCTCACAAAGCACAGTCCATCACTTGCCTTGCTGCCAAGTGGCACGTATCGGCTGCTATAAACACGTTCGATGACCTCGACAATGAGACGCCGACAACATCTGTGATTGCGACGTTTGAATTCAACTCTGATGATGACGAAGACGATGACGAGGACGACGAGGATGATATGAAACTGATGCCAGTTTTTGCTCATACAATCTCATTCCAAAAGAGGCAGGCATTAGGTATGTAAAAACATGCATGAACTTAATTTGATTCAGCTATTTACCAGTTATGAATGGAGGGTATTGTTGGGATTTGAAGCCGGAGGGCTATTTATAGTAAATGATGTGGTAGGATTATATAGGGTAAATATTTCGTAAACATATATAGTAAATATTTAGTAAAGATTTGATAGATTATATTTGAGAGGTGATTAAATATGTTAAACTTATATTTAGTAAATTGAAACCATATATATAAATATATACCTCATTAGATAGTGCTCTCAAAATATACTTTCTTCATTCCCCGTATTCTTTTGATGTACATACCTGAAGTCATCAATAAAACCTTTAGCTAATATTCCTCCTTGAGTTTTCTCTCTCTCGTTCTTGATCGAGTGTGTGCGTTGTTGTGCGATTCTACCTTTAGCTAATATTCCTCCTTGAGTTTTCTCTCTCTCGTTCTTGATCGAGTGTGTGCGTTGTTGTGCGATCCTAACATGTATTTATTTCTGTGTTGTAGTGACATATTTGAGGAATAACAAAGCAGGAATTACAGTGTATGGATTCGTGGTGGATCGAACATGGTTGAAATCCGTTTTTGCTATTGAACTTGCACTTGTGCTGTGGCTACTCAATAAGACTGTTGGTATTTCTTGAAGGTTTTGCTGCTATACAATCTAATGAACCAATGAATTTCAT

mRNA sequence

AATCGGAATCGGAATCGGAATCGGAATCGGATTCCGCCGAATTGCGGAGGTTCGAATCGTTTCTGAAATGGATTTGCATAATGGATCACTCAAATCCGTTCACCGCAACGCTGTCCTGCTTCCTGTTCTCCGCCTTCGCGATCGCCGTCCCGATCGCATCGCACTTCGCCCTTTCTTGCTCCGATTGCGACGAAGATCATCGAAGGCCTTTCCATGTGGTCGTTCAGCTCTCTCTCTCCGCCGTTGCGACGCTCTCTTTCGGTTGCCTCTCCGCCTGGCTCCGCCACTTCGGATTGAGCCGATTTCTGTTCCTGGATAAGCTCTGTGAATCCAGCCACAAGGCTCGCGATGAATACTCCAAGCAATTAAAGAGATCAATGGAGCTGATCTCCTTCTTCTTGCTGCCATGTTTCATGGCGGAAGCAGCCTACAAAATCTGGTGGTACGTCTCAGCAGCCTACGAAATACCATACTACGGCAACATGTACCTTAGTTACATCACCTCCTGCACCTTAGAGCTCTTCTCATGGCTTTACAGAACTTCCATCTTCTTCTTCGTCTGTATTCTCTTCCGCCTCGTCTGCCGCCTCCAAATGATCCGACTCGAAGACTTCGTTTCCGTTTTCCATCGCGAAAGCGACGTCGGCACCATCTTGATGCAGCATTTGGGCCTTAGAAGAACCTTGACCATCATCAGCCATCGCTTCAGAGTGTTCATGTTCTTGTCTTTGATTTTGGTCACTGCCAGTCAGTTCATCTTTCTTTTGATGACTACTAGATCACATGCTCTTGCTAACCTCTCAAAAACTGGACAACTTGCGCTATGTTCCATAAGCCTAGTGACTGGCTTGTTCATATGCCTCCGTAGTGCTGCAAAGATCTCTCACAAAGCACAGTCCATCACTTGCCTTGCTGCCAAGTGGCACGTATCGGCTGCTATAAACACGTTCGATGACCTCGACAATGAGACGCCGACAACATCTGTGATTGCGACGTTTGAATTCAACTCTGATGATGACGAAGACGATGACGAGGACGACGAGGATGATATGAAACTGATGCCAGTTTTTGCTCATACAATCTCATTCCAAAAGAGGCAGGCATTAGTGACATATTTGAGGAATAACAAAGCAGGAATTACAGTGTATGGATTCGTGGTGGATCGAACATGGTTGAAATCCGTTTTTGCTATTGAACTTGCACTTGTGCTGTGGCTACTCAATAAGACTGTTGGTATTTCTTGAAGGTTTTGCTGCTATACAATCTAATGAACCAATGAATTTCAT

Coding sequence (CDS)

ATGGATCACTCAAATCCGTTCACCGCAACGCTGTCCTGCTTCCTGTTCTCCGCCTTCGCGATCGCCGTCCCGATCGCATCGCACTTCGCCCTTTCTTGCTCCGATTGCGACGAAGATCATCGAAGGCCTTTCCATGTGGTCGTTCAGCTCTCTCTCTCCGCCGTTGCGACGCTCTCTTTCGGTTGCCTCTCCGCCTGGCTCCGCCACTTCGGATTGAGCCGATTTCTGTTCCTGGATAAGCTCTGTGAATCCAGCCACAAGGCTCGCGATGAATACTCCAAGCAATTAAAGAGATCAATGGAGCTGATCTCCTTCTTCTTGCTGCCATGTTTCATGGCGGAAGCAGCCTACAAAATCTGGTGGTACGTCTCAGCAGCCTACGAAATACCATACTACGGCAACATGTACCTTAGTTACATCACCTCCTGCACCTTAGAGCTCTTCTCATGGCTTTACAGAACTTCCATCTTCTTCTTCGTCTGTATTCTCTTCCGCCTCGTCTGCCGCCTCCAAATGATCCGACTCGAAGACTTCGTTTCCGTTTTCCATCGCGAAAGCGACGTCGGCACCATCTTGATGCAGCATTTGGGCCTTAGAAGAACCTTGACCATCATCAGCCATCGCTTCAGAGTGTTCATGTTCTTGTCTTTGATTTTGGTCACTGCCAGTCAGTTCATCTTTCTTTTGATGACTACTAGATCACATGCTCTTGCTAACCTCTCAAAAACTGGACAACTTGCGCTATGTTCCATAAGCCTAGTGACTGGCTTGTTCATATGCCTCCGTAGTGCTGCAAAGATCTCTCACAAAGCACAGTCCATCACTTGCCTTGCTGCCAAGTGGCACGTATCGGCTGCTATAAACACGTTCGATGACCTCGACAATGAGACGCCGACAACATCTGTGATTGCGACGTTTGAATTCAACTCTGATGATGACGAAGACGATGACGAGGACGACGAGGATGATATGAAACTGATGCCAGTTTTTGCTCATACAATCTCATTCCAAAAGAGGCAGGCATTAGTGACATATTTGAGGAATAACAAAGCAGGAATTACAGTGTATGGATTCGTGGTGGATCGAACATGGTTGAAATCCGTTTTTGCTATTGAACTTGCACTTGTGCTGTGGCTACTCAATAAGACTGTTGGTATTTCTTGA

Protein sequence

MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFGCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIWWYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVSVFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANLSKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTTSVIATFEFNSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITVYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS

Homology

[Close]

BLAST of CmaCh18G005860.1 vs. TrEMBL
Match: A0A0A0M3M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699550 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 1.9e-168
Identity = 318/391 (81.33%), Postives = 346/391 (88.49%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           MDHSN + A++SC +F  F IAVPIASHF LSCSDCDEDH+RPFHVVVQLSLSAVATLSF
Sbjct: 44  MDHSNLYRASVSCIMFFVFGIAVPIASHFGLSCSDCDEDHQRPFHVVVQLSLSAVATLSF 103

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS WLR FGL+RFLFLDKLCE+S K R EY +QL++SM+L+SFFLLPCFMAEA YKIW
Sbjct: 104 LCLSLWLRVFGLNRFLFLDKLCEASPKIRAEYFRQLQKSMKLMSFFLLPCFMAEAGYKIW 163

Query: 121 WYVSAAYEIPYY-GNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFV 180
           WY+SAA EIPYY  NMY+SY+TSCTLEL SWLYRTSIFFFVCI FRL+C LQMIRLEDF 
Sbjct: 164 WYISAAKEIPYYTNNMYISYVTSCTLELCSWLYRTSIFFFVCIFFRLICCLQMIRLEDFA 223

Query: 181 SVFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALAN 240
           S F  E++VGTIL+QHLGLRRT T+ISHRFRVFM LSLILVTASQFI LLMTTRS A AN
Sbjct: 224 SSFRSETEVGTILIQHLGLRRTFTVISHRFRVFMLLSLILVTASQFISLLMTTRSKAHAN 283

Query: 241 LSKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNE-TP 300
           LSK+GQLALCSISLVTGLFICLRSAAKI+HKAQSITCLAAKWHVSA INTFD+LD E TP
Sbjct: 284 LSKSGQLALCSISLVTGLFICLRSAAKITHKAQSITCLAAKWHVSAVINTFDELDTEMTP 343

Query: 301 TTSVIA-TFEFNSDD-DEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITVY 360
           T S +    E NSDD D D+DEDD DD KLMPVFAHTISFQKRQALVTYLRNNKAGITVY
Sbjct: 344 TASFVPNVVESNSDDEDGDEDEDDLDDAKLMPVFAHTISFQKRQALVTYLRNNKAGITVY 403

Query: 361 GFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           GF+VDRTWLKS+FAIELAL LWLLNKTVG+S
Sbjct: 404 GFMVDRTWLKSIFAIELALFLWLLNKTVGVS 434

[Close]

BLAST of CmaCh18G005860.1 vs. TrEMBL
Match: F6I7J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0523g00050 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 5.5e-128
Identity = 241/393 (61.32%), Postives = 301/393 (76.59%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D SN +   LS  +F   AI VPI SHF  SCS CD+ H RP+ V+VQLSLS++A LSF
Sbjct: 38  VDQSNLWRTGLSWSIFFVLAIGVPILSHFLFSCSSCDDKHARPYDVIVQLSLSSLAALSF 97

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
             LSA ++ +GL R LFLDKLC+ S K R  Y++QL RSM+L+S F+LPCF  E AYKIW
Sbjct: 98  ISLSALVKKYGLRRSLFLDKLCDVSEKVRLGYTQQLHRSMKLLSLFVLPCFAVEIAYKIW 157

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY++ A +IPY GN+YLS+  +CTLEL SWLYRT+IF  VC+LFRL+C +Q++RLEDF  
Sbjct: 158 WYITGATQIPYLGNIYLSHAIACTLELCSWLYRTAIFLLVCVLFRLICHMQILRLEDFAQ 217

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +ESDVG++L +HL +RR L IISHRFRVF+  SLILVTASQ   LL+TTRS A   +
Sbjct: 218 VFQKESDVGSVLKEHLRIRRNLRIISHRFRVFILSSLILVTASQLASLLITTRSSAKVTI 277

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            K G+LALCSISLVTGL ICLRSA KI+HKAQS+TCLAAKWHV A I+TFD  D ETPT 
Sbjct: 278 YKAGELALCSISLVTGLGICLRSATKITHKAQSVTCLAAKWHVCATIDTFDATDGETPTI 337

Query: 301 SVIATFEF------NSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGIT 360
              +   F       SDD+E D +D  D+ K++P++AHTISF KRQALVTYL NN+AGIT
Sbjct: 338 RAASAQVFPVNTNWGSDDEEGDGDDALDNTKMIPIYAHTISFHKRQALVTYLENNRAGIT 397

Query: 361 VYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           V+GF++DRTWL ++F +E++LVLWLL+KT+GIS
Sbjct: 398 VFGFMLDRTWLHTIFGVEMSLVLWLLSKTIGIS 430

[Close]

BLAST of CmaCh18G005860.1 vs. TrEMBL
Match: A0A061GNZ3_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_030325 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 3.6e-127
Identity = 234/392 (59.69%), Postives = 304/392 (77.55%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+ +   LS  +F   A+ VPI SHF L CS+CDE+H+RP+  +VQLSLS+ A +SF
Sbjct: 38  LDQSSLWRVGLSWSVFFVLAVGVPIVSHFVLLCSNCDEEHQRPYDGLVQLSLSSFAAISF 97

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
             LS+W R +G+ RFLFLDKLC+ S K R  Y+K+L++SM+L+  F+LPCF AE+AY+IW
Sbjct: 98  ISLSSWARKYGIRRFLFLDKLCDVSDKVRQGYAKELQKSMKLLCIFVLPCFAAESAYRIW 157

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY + A +IPY GN Y+S I +CTL+L SWLYRTSIF   CIL++L C LQ++RLEDF  
Sbjct: 158 WYATGASQIPYLGNYYISDIIACTLQLSSWLYRTSIFILACILYQLTCHLQILRLEDFAQ 217

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +E++VG+IL +HL +RR L IISHRFR+F+ LSL+ +TASQFI L MTTR+    N 
Sbjct: 218 VFQKETEVGSILAEHLRIRRNLRIISHRFRLFLLLSLVFITASQFIALFMTTRTSTTVNF 277

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            + G+LALCSISLVTGLFICLRSA KI+H+AQSIT LAAKWHV A IN+FDD D ETPT 
Sbjct: 278 YEAGELALCSISLVTGLFICLRSATKITHRAQSITSLAAKWHVCATINSFDDADGETPTA 337

Query: 301 SVIATFEFNS-----DDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITV 360
            ++++    +      ++E+D EDD D+  L+P+FAHTISFQKRQALVTYL +N+AGITV
Sbjct: 338 QIVSSQMLPAGVDWESEEEEDGEDDLDNTNLVPIFAHTISFQKRQALVTYLEHNRAGITV 397

Query: 361 YGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           +GF+VDRT + ++F IELAL+LWLLNKT+GIS
Sbjct: 398 FGFMVDRTGIHTIFVIELALLLWLLNKTIGIS 429

[Close]

BLAST of CmaCh18G005860.1 vs. TrEMBL
Match: A0A059CB84_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03959 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.4e-126
Identity = 234/393 (59.54%), Postives = 303/393 (77.10%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+ +   LS  +F  FA+AVP+ASHF L CS CD + +RP+H+ VQ+SLS  A +SF
Sbjct: 43  VDQSSLWLTGLSWSVFFLFAVAVPLASHFLLQCSSCDANLQRPYHIPVQISLSVFAAISF 102

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS W R +G+ +FLFLDKLC+SS   R  YS+QL+RS++L ++F+LPCF  E AYK+W
Sbjct: 103 VCLSRWSRKYGIRKFLFLDKLCDSSDNVRRGYSQQLQRSVKLWTWFVLPCFAVETAYKLW 162

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           W++  +  IPYYGN+Y+S    C LEL SWLYRT+IF  VC+L+RL+C L ++RLEDF  
Sbjct: 163 WFIDGSTNIPYYGNLYVSDTILCALELLSWLYRTAIFILVCVLYRLICYLHILRLEDFAH 222

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +E++V +IL +HL  RRTL IISHRFR F+ L LILVTASQFIF+L+ TRS A AN+
Sbjct: 223 VFEKETEVVSILKEHLRFRRTLRIISHRFRSFLLLCLILVTASQFIFVLLLTRSGANANI 282

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            K G+L+LCS+SL+TGLFICLRSA K+SHKAQSIT LAAKWH+ A IN+FDD D ETP  
Sbjct: 283 FKAGELSLCSVSLLTGLFICLRSATKVSHKAQSITGLAAKWHICATINSFDDNDGETPRI 342

Query: 301 SVIATF------EFNSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGIT 360
            V +T       E+ S+++E D +DD ++ K+MP++AHTISF KRQALVTYL +NKAGIT
Sbjct: 343 EVASTHVFPADAEWESEEEEGDGDDDLNNAKIMPIYAHTISFHKRQALVTYLEHNKAGIT 402

Query: 361 VYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           VYGF++DRT+L ++F IE AL LWLLNKT+GIS
Sbjct: 403 VYGFMLDRTYLHTIFGIEFALFLWLLNKTIGIS 435

[Close]

BLAST of CmaCh18G005860.1 vs. TrEMBL
Match: A0A061GG46_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_030325 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.0e-125
Identity = 231/389 (59.38%), Postives = 301/389 (77.38%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+ +   LS  +F   A+ VPI SHF L CS+CDE+H+RP+  +VQLSLS+ A +SF
Sbjct: 38  LDQSSLWRVGLSWSVFFVLAVGVPIVSHFVLLCSNCDEEHQRPYDGLVQLSLSSFAAISF 97

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
             LS+W R +G+ RFLFLDKLC+ S K R  Y+K+L++SM+L+  F+LPCF AE+AY+IW
Sbjct: 98  ISLSSWARKYGIRRFLFLDKLCDVSDKVRQGYAKELQKSMKLLCIFVLPCFAAESAYRIW 157

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY + A +IPY GN Y+S I +CTL+L SWLYRTSIF   CIL++L C LQ++RLEDF  
Sbjct: 158 WYATGASQIPYLGNYYISDIIACTLQLSSWLYRTSIFILACILYQLTCHLQILRLEDFAQ 217

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +E++VG+IL +HL +RR L IISHRFR+F+ LSL+ +TASQFI L MTTR+    N 
Sbjct: 218 VFQKETEVGSILAEHLRIRRNLRIISHRFRLFLLLSLVFITASQFIALFMTTRTSTTVNF 277

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            + G+LALCSISLVTGLFICLRSA KI+H+AQSIT LAAKWHV A IN+FDD D ETPT 
Sbjct: 278 YEAGELALCSISLVTGLFICLRSATKITHRAQSITSLAAKWHVCATINSFDDADGETPTA 337

Query: 301 SVIATFEFNS-----DDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITV 360
            ++++    +      ++E+D EDD D+  L+P+FAHTISFQKRQALVTYL +N+AGITV
Sbjct: 338 QIVSSQMLPAGVDWESEEEEDGEDDLDNTNLVPIFAHTISFQKRQALVTYLEHNRAGITV 397

Query: 361 YGFVVDRTWLKSVFAIELALVLWLLNKTV 385
           +GF+VDRT + ++F IELAL+LWLLNKT+
Sbjct: 398 FGFMVDRTGIHTIFVIELALLLWLLNKTI 426

[Close]

BLAST of CmaCh18G005860.1 vs. TAIR10
Match: AT3G20300.1 (AT3G20300.1 Protein of unknown function (DUF3537))

HSP 1 Score: 415.6 bits (1067), Expect = 3.3e-116
Identity = 220/398 (55.28%), Postives = 294/398 (73.87%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+P+TA LS  +F  F + VP  SHF L+CSDCD  H RP+  VVQLSLS+ A LSF
Sbjct: 55  VDQSSPWTAVLSWSMFVVFTLVVPATSHFMLACSDCDSHHSRPYDSVVQLSLSSFAALSF 114

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS ++  +GL RFLF DKL + S   R  Y+ QL RS++++S+F+ PCF+A ++YKIW
Sbjct: 115 LCLSRFVSKYGLRRFLFFDKLWDESETVRLGYTNQLNRSLKILSYFVSPCFLAMSSYKIW 174

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY S A +IP+ GN+ LS   +C +EL SWLYRT++ F VC+LFRL+C LQ++RL+DF  
Sbjct: 175 WYASGASQIPFLGNVILSDTVACLMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQ 234

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF  +SDVG+IL +HL +RR L IISHR+R F+ LSLILVT SQF  LL+TT+++A  N+
Sbjct: 235 VFQMDSDVGSILSEHLRIRRHLRIISHRYRTFILLSLILVTGSQFYSLLITTKAYAELNI 294

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            + G+LALCS++LVT L I LRSA+KI+HKAQ++TCLAAKWHV A I +F+ +D ETP  
Sbjct: 295 YRAGELALCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRL 354

Query: 301 SVIATFE--FNSDDD------ED--DDEDDEDDMKLMPVFAH-TISFQKRQALVTYLRNN 360
              A+    + +DDD      ED  D+EDD D+  L+P +A+ TISFQKRQALV Y  NN
Sbjct: 355 VDRASGHGYYPTDDDNGESDSEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENN 414

Query: 361 KAGITVYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           ++GITV+GF +DR+ L ++F IE++LVLWLL KT+GIS
Sbjct: 415 RSGITVFGFTLDRSTLHTIFGIEMSLVLWLLGKTIGIS 452

[Close]

BLAST of CmaCh18G005860.1 vs. TAIR10
Match: AT4G22270.1 (AT4G22270.1 Protein of unknown function (DUF3537))

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-115
Identity = 220/391 (56.27%), Postives = 285/391 (72.89%), Query Frame = 1


Query: 2   DHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFG 61
           D SN  TA LS  +F    + VP+ SHF L CSDCD  HRRP+ V+VQLSLS  A +SF 
Sbjct: 43  DQSNFGTALLSWSVFFLLVVIVPLISHFLLVCSDCDFHHRRPYDVIVQLSLSIFAGISFV 102

Query: 62  CLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIWW 121
            LS W R FG+ RFLFLDKL + S K R EY  +++RS++ +  F+LP    EA Y+IWW
Sbjct: 103 SLSIWSRKFGMRRFLFLDKLWDVSDKVRIEYEAEIQRSLKRLMIFVLPSLTLEATYRIWW 162

Query: 122 YVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVSV 181
           Y+S   +IPY  N  LS++ +CTL+L SWLYR S+F  VCIL+++ C LQ +RL+DF   
Sbjct: 163 YISGFNQIPYIINPILSHVVACTLQLSSWLYRNSLFIIVCILYKITCHLQTLRLDDFARC 222

Query: 182 FHRE-SDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 241
           F  E +DV + L +H  +RR L I+SHRFR F+ LSLILVTA+QF+ LL TTR+    N+
Sbjct: 223 FASEITDVRSALGEHQKIRRNLRIVSHRFRRFILLSLILVTATQFMALLTTTRASVAVNI 282

Query: 242 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 301
            + G+LALCS+SLVTG+FICLRSA KI+HKAQS+T LAAKW+V A +++FD LD ETPT 
Sbjct: 283 YEVGELALCSLSLVTGVFICLRSATKITHKAQSVTSLAAKWNVCATVDSFDHLDGETPTG 342

Query: 302 SVIATFEF-------NSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGI 361
           S+I +           SDD+E + +DD D+ K+ P++A+TIS+QKRQALVTYL NNKAGI
Sbjct: 343 SIIESQVSLRGNAIETSDDEEGEGDDDLDNTKIHPIYANTISYQKRQALVTYLENNKAGI 402

Query: 362 TVYGFVVDRTWLKSVFAIELALVLWLLNKTV 385
           TVYGF+VDR+WL ++F IELAL+LWLLNKT+
Sbjct: 403 TVYGFLVDRSWLNTIFGIELALLLWLLNKTI 433

[Close]

BLAST of CmaCh18G005860.1 vs. TAIR10
Match: AT1G50630.1 (AT1G50630.1 Protein of unknown function (DUF3537))

HSP 1 Score: 401.7 bits (1031), Expect = 5.0e-112
Identity = 213/405 (52.59%), Postives = 284/405 (70.12%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +DHS+P+TA LS  +F  F + VP  SHF L+C+DCD  H RP+  VVQLSLS+VAT+SF
Sbjct: 49  VDHSSPWTAILSWTMFIVFTLVVPAISHFLLACADCDSYHSRPYDSVVQLSLSSVATVSF 108

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CL+ ++  +GL RFLF DKL + S   R  Y+ QL  S+ ++S+F++PCF A +AYKIW
Sbjct: 109 LCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQLNTSLHIVSYFVIPCFSAMSAYKIW 168

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY S    IP+ GN  LS   +C +EL SWLYRT++ F VC+LFRL+C LQ++RL+DF  
Sbjct: 169 WYASGGSRIPFLGNAVLSDTVACIMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAK 228

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           +F  +SDVG+IL +HL +RR L IISHR+R F+   LILVT SQF  LL+TT+++   N+
Sbjct: 229 LFQIDSDVGSILSEHLRIRRHLRIISHRYRSFILCLLILVTGSQFSSLLITTKAYTEVNI 288

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFD------DLD 300
            + G+LALCS++LVT L I LRSA+KI+HKAQ++TCLAAKWHV A + +FD      D  
Sbjct: 289 YRAGELALCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATLESFDQTVESFDQT 348

Query: 301 NETPTTSV-----------IATFEFNSDDDEDDDEDDEDDMKLMPVFA-HTISFQKRQAL 360
            ETPT              + T   +  D+  D+EDD D+  ++PV+A  T+SFQKRQAL
Sbjct: 349 VETPTLVARNNNDNNNVHDVVTLTESDSDEYGDEEDDLDNNDIIPVYAFSTMSFQKRQAL 408

Query: 361 VTYLRNNKAGITVYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           V+Y  NN AGITVYGF +DR  L ++F +EL+LVLWLL KT+GIS
Sbjct: 409 VSYFENNSAGITVYGFTLDRGTLHTIFGLELSLVLWLLGKTIGIS 453

[Close]

BLAST of CmaCh18G005860.1 vs. TAIR10
Match: AT4G03820.2 (AT4G03820.2 Protein of unknown function (DUF3537))

HSP 1 Score: 372.1 bits (954), Expect = 4.2e-103
Identity = 205/394 (52.03%), Postives = 278/394 (70.56%), Query Frame = 1


Query: 2   DHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFG 61
           D SN     LS  +F   A+ VP+ SHF L C+DCD  HRRP+  +VQLSLS  A +SF 
Sbjct: 40  DQSNRIKTLLSWSIFFLLAVIVPMISHFVLICADCDFKHRRPYDGLVQLSLSIFAGISFV 99

Query: 62  CLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIWW 121
            LS W + +G+ RFLF DKL + S K R  Y  +++RSM+L++ F+LP    +A Y+IWW
Sbjct: 100 SLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSMKLLAIFVLPSTTLQAIYRIWW 159

Query: 122 YVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVSV 181
           Y S   +IPY  N  LS++ +CTL+L SWLYRTS+F   CIL++ +C LQ++RL++F   
Sbjct: 160 YASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFIIACILYQNICHLQVLRLDEFARC 219

Query: 182 FHRE-SDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 241
           F  E  D  +IL +HL +RR L I+SHRFR F+ LSL  VTA+QF+ LL T R+    N+
Sbjct: 220 FASEIKDFSSILAEHLKIRRELKIVSHRFRRFILLSLFFVTATQFMALLTTIRASVPFNI 279

Query: 242 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDL-DNETP- 301
            + G+LALCS SLV+GLFICL+SA +++HKAQS+T +A KW+V A+++TFD L D ETP 
Sbjct: 280 YEVGELALCSTSLVSGLFICLKSATQMTHKAQSVTSIATKWNVCASLDTFDVLYDGETPK 339

Query: 302 ---TT--SVIATFEFN---SDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNK 361
              TT  S I +   N   S DD+++ E D++D+++ P+FA  IS QKRQALVTYL NN+
Sbjct: 340 CPTTTQHSQILSRRRNVVQSSDDDEEGEGDDNDLEIHPIFARAISSQKRQALVTYLENNR 399

Query: 362 AGITVYGFVVDRTWLKSVFAIELALVLWLLNKTV 385
           AGITVYGF+VD+TWL+ +F+IELAL+LWLL KT+
Sbjct: 400 AGITVYGFLVDKTWLRMIFSIELALLLWLLKKTI 433

[Close]

BLAST of CmaCh18G005860.1 vs. TAIR10
Match: AT2G21080.1 (AT2G21080.1 unknown protein)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-50
Identity = 126/398 (31.66%), Postives = 212/398 (53.27%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRP--------FHVVVQLSL 60
           +DHS+     +S  +F  F + VP+     +SC        RP        F+V+VQ   
Sbjct: 44  LDHSSSCGKAVSYMMFVVFTLLVPL-----ISCLFIKTPRNRPSAVMDANSFNVLVQFPE 103

Query: 61  SAVATLSFGCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFM 120
           S +A + F  L  + R + L++ LFLD     S   R  YS++L +++  +++ L+P F+
Sbjct: 104 SGLAVIGFLTLICFFRIYSLTKLLFLD----DSTLVRLGYSRELDKALRYLAYILVPSFL 163

Query: 121 AEAAYKIWWYVSAAYEIPYYGNMYLSY-ITSCTLELFSWLYRTSIFFFVCILFRLVCRLQ 180
            E  +K  ++ SA    P+  +   +       L LFSW+YRT +F  VCILFRL C LQ
Sbjct: 164 VELVHKSIFFYSAEVSFPFIKSSCAALNFVMFFLVLFSWVYRTGVFLLVCILFRLTCELQ 223

Query: 181 MIRLEDFVSVFHR--ESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLL 240
           ++R      +F R     +  +  +H+ +++ L+  SHR+R F+  + ++++ SQF+ LL
Sbjct: 224 ILRFRGLHKLFDRCGSDTIEDVCKEHVRIKKQLSATSHRYRFFIITAFVVISTSQFVALL 283

Query: 241 MTTRSHALANLSKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINT 300
           +   S +  +   +G L +CS   ++G F+CL  AA+I+H+AQ + C+A +WH++     
Sbjct: 284 LVLASKSEKSFLSSGDLVVCSAVQLSGFFLCLLGAARITHRAQGVVCIATRWHMAL---- 343

Query: 301 FDDLDNETPTTSVIATFEFNSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNN 360
                  T  +  ++        + D D  D   + + P    +  FQ RQALV YLR+N
Sbjct: 344 -------TCASEAVS-------PESDTDSSDNIYINVSPSLDLSSFFQARQALVEYLRHN 403

Query: 361 KAGITVYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
             GIT+YG+ +DR  L ++FA E +LV+W+L+K V +S
Sbjct: 404 NKGITLYGYALDRGLLHTLFAFEFSLVMWILSKVVVLS 414

[Close]

BLAST of CmaCh18G005860.1 vs. NCBI nr
Match: gi|659118168|ref|XP_008458982.1| (PREDICTED: uncharacterized protein LOC103498231 [Cucumis melo])

HSP 1 Score: 608.2 bits (1567), Expect = 9.9e-171
Identity = 321/389 (82.52%), Postives = 345/389 (88.69%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           MDHSN + A+LSC +F  F IAVPIASHFALSCSDCDEDH+RPFHVVVQLSLSAVATLSF
Sbjct: 47  MDHSNLYRASLSCIVFFVFGIAVPIASHFALSCSDCDEDHQRPFHVVVQLSLSAVATLSF 106

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS WLR FGL+RFLFLDKL E+S K R EY +QL+RSMEL+SFFLLPCFMAEA YKIW
Sbjct: 107 LCLSLWLRLFGLNRFLFLDKLSEASPKIRAEYFRQLQRSMELMSFFLLPCFMAEAGYKIW 166

Query: 121 WYVSAAYEIPYY-GNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFV 180
           WY+SAA EIPYY  NMY+SYITSCTLEL SWLYRTSIFFFVCILFRL+C LQMIRLEDF 
Sbjct: 167 WYISAAKEIPYYTNNMYISYITSCTLELCSWLYRTSIFFFVCILFRLICCLQMIRLEDFA 226

Query: 181 SVFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALAN 240
           S+F  E++VGTIL+QHLGLRRT TIISHRFRVFM LSLILVTASQFI LLMTTRS A  N
Sbjct: 227 SIFRSETEVGTILIQHLGLRRTFTIISHRFRVFMLLSLILVTASQFISLLMTTRSKAHVN 286

Query: 241 LSKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNET-P 300
           LSK GQLALCSISLVTGLFICLRSAAKI+HKAQSITCLAAKWHVSA INTFDDLD ET P
Sbjct: 287 LSKAGQLALCSISLVTGLFICLRSAAKITHKAQSITCLAAKWHVSAVINTFDDLDTETPP 346

Query: 301 TTSVIATFEFNSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITVYGF 360
           T S++     ++ DDED DEDD DD KLMPVFAHTISFQKRQALVTYLRNNKAGITVYGF
Sbjct: 347 TASLVPNIVESNSDDEDGDEDDLDDPKLMPVFAHTISFQKRQALVTYLRNNKAGITVYGF 406

Query: 361 VVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           +VDRTWLKS+FAIELAL LWLLNKTVG+S
Sbjct: 407 MVDRTWLKSIFAIELALFLWLLNKTVGVS 435

[Close]

BLAST of CmaCh18G005860.1 vs. NCBI nr
Match: gi|778664449|ref|XP_011660297.1| (PREDICTED: uncharacterized protein LOC101203162 [Cucumis sativus])

HSP 1 Score: 600.1 bits (1546), Expect = 2.7e-168
Identity = 318/391 (81.33%), Postives = 346/391 (88.49%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           MDHSN + A++SC +F  F IAVPIASHF LSCSDCDEDH+RPFHVVVQLSLSAVATLSF
Sbjct: 44  MDHSNLYRASVSCIMFFVFGIAVPIASHFGLSCSDCDEDHQRPFHVVVQLSLSAVATLSF 103

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS WLR FGL+RFLFLDKLCE+S K R EY +QL++SM+L+SFFLLPCFMAEA YKIW
Sbjct: 104 LCLSLWLRVFGLNRFLFLDKLCEASPKIRAEYFRQLQKSMKLMSFFLLPCFMAEAGYKIW 163

Query: 121 WYVSAAYEIPYY-GNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFV 180
           WY+SAA EIPYY  NMY+SY+TSCTLEL SWLYRTSIFFFVCI FRL+C LQMIRLEDF 
Sbjct: 164 WYISAAKEIPYYTNNMYISYVTSCTLELCSWLYRTSIFFFVCIFFRLICCLQMIRLEDFA 223

Query: 181 SVFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALAN 240
           S F  E++VGTIL+QHLGLRRT T+ISHRFRVFM LSLILVTASQFI LLMTTRS A AN
Sbjct: 224 SSFRSETEVGTILIQHLGLRRTFTVISHRFRVFMLLSLILVTASQFISLLMTTRSKAHAN 283

Query: 241 LSKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNE-TP 300
           LSK+GQLALCSISLVTGLFICLRSAAKI+HKAQSITCLAAKWHVSA INTFD+LD E TP
Sbjct: 284 LSKSGQLALCSISLVTGLFICLRSAAKITHKAQSITCLAAKWHVSAVINTFDELDTEMTP 343

Query: 301 TTSVIA-TFEFNSDD-DEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITVY 360
           T S +    E NSDD D D+DEDD DD KLMPVFAHTISFQKRQALVTYLRNNKAGITVY
Sbjct: 344 TASFVPNVVESNSDDEDGDEDEDDLDDAKLMPVFAHTISFQKRQALVTYLRNNKAGITVY 403

Query: 361 GFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           GF+VDRTWLKS+FAIELAL LWLLNKTVG+S
Sbjct: 404 GFMVDRTWLKSIFAIELALFLWLLNKTVGVS 434

[Close]

BLAST of CmaCh18G005860.1 vs. NCBI nr
Match: gi|590626608|ref|XP_007026217.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 463.0 bits (1190), Expect = 5.1e-127
Identity = 234/392 (59.69%), Postives = 304/392 (77.55%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+ +   LS  +F   A+ VPI SHF L CS+CDE+H+RP+  +VQLSLS+ A +SF
Sbjct: 38  LDQSSLWRVGLSWSVFFVLAVGVPIVSHFVLLCSNCDEEHQRPYDGLVQLSLSSFAAISF 97

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
             LS+W R +G+ RFLFLDKLC+ S K R  Y+K+L++SM+L+  F+LPCF AE+AY+IW
Sbjct: 98  ISLSSWARKYGIRRFLFLDKLCDVSDKVRQGYAKELQKSMKLLCIFVLPCFAAESAYRIW 157

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY + A +IPY GN Y+S I +CTL+L SWLYRTSIF   CIL++L C LQ++RLEDF  
Sbjct: 158 WYATGASQIPYLGNYYISDIIACTLQLSSWLYRTSIFILACILYQLTCHLQILRLEDFAQ 217

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +E++VG+IL +HL +RR L IISHRFR+F+ LSL+ +TASQFI L MTTR+    N 
Sbjct: 218 VFQKETEVGSILAEHLRIRRNLRIISHRFRLFLLLSLVFITASQFIALFMTTRTSTTVNF 277

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            + G+LALCSISLVTGLFICLRSA KI+H+AQSIT LAAKWHV A IN+FDD D ETPT 
Sbjct: 278 YEAGELALCSISLVTGLFICLRSATKITHRAQSITSLAAKWHVCATINSFDDADGETPTA 337

Query: 301 SVIATFEFNS-----DDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGITV 360
            ++++    +      ++E+D EDD D+  L+P+FAHTISFQKRQALVTYL +N+AGITV
Sbjct: 338 QIVSSQMLPAGVDWESEEEEDGEDDLDNTNLVPIFAHTISFQKRQALVTYLEHNRAGITV 397

Query: 361 YGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           +GF+VDRT + ++F IELAL+LWLLNKT+GIS
Sbjct: 398 FGFMVDRTGIHTIFVIELALLLWLLNKTIGIS 429

[Close]

BLAST of CmaCh18G005860.1 vs. NCBI nr
Match: gi|702351502|ref|XP_010057868.1| (PREDICTED: uncharacterized protein LOC104445657 [Eucalyptus grandis])

HSP 1 Score: 461.1 bits (1185), Expect = 2.0e-126
Identity = 234/393 (59.54%), Postives = 303/393 (77.10%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D S+ +   LS  +F  FA+AVP+ASHF L CS CD + +RP+H+ VQ+SLS  A +SF
Sbjct: 43  VDQSSLWLTGLSWSVFFLFAVAVPLASHFLLQCSSCDANLQRPYHIPVQISLSVFAAISF 102

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
            CLS W R +G+ +FLFLDKLC+SS   R  YS+QL+RS++L ++F+LPCF  E AYK+W
Sbjct: 103 VCLSRWSRKYGIRKFLFLDKLCDSSDNVRRGYSQQLQRSVKLWTWFVLPCFAVETAYKLW 162

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           W++  +  IPYYGN+Y+S    C LEL SWLYRT+IF  VC+L+RL+C L ++RLEDF  
Sbjct: 163 WFIDGSTNIPYYGNLYVSDTILCALELLSWLYRTAIFILVCVLYRLICYLHILRLEDFAH 222

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +E++V +IL +HL  RRTL IISHRFR F+ L LILVTASQFIF+L+ TRS A AN+
Sbjct: 223 VFEKETEVVSILKEHLRFRRTLRIISHRFRSFLLLCLILVTASQFIFVLLLTRSGANANI 282

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            K G+L+LCS+SL+TGLFICLRSA K+SHKAQSIT LAAKWH+ A IN+FDD D ETP  
Sbjct: 283 FKAGELSLCSVSLLTGLFICLRSATKVSHKAQSITGLAAKWHICATINSFDDNDGETPRI 342

Query: 301 SVIATF------EFNSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGIT 360
            V +T       E+ S+++E D +DD ++ K+MP++AHTISF KRQALVTYL +NKAGIT
Sbjct: 343 EVASTHVFPADAEWESEEEEGDGDDDLNNAKIMPIYAHTISFHKRQALVTYLEHNKAGIT 402

Query: 361 VYGFVVDRTWLKSVFAIELALVLWLLNKTVGIS 388
           VYGF++DRT+L ++F IE AL LWLLNKT+GIS
Sbjct: 403 VYGFMLDRTYLHTIFGIEFALFLWLLNKTIGIS 435

[Close]

BLAST of CmaCh18G005860.1 vs. NCBI nr
Match: gi|731404403|ref|XP_003632960.2| (PREDICTED: uncharacterized protein LOC100854830 [Vitis vinifera])

HSP 1 Score: 459.9 bits (1182), Expect = 4.3e-126
Identity = 238/390 (61.03%), Postives = 298/390 (76.41%), Query Frame = 1


Query: 1   MDHSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSF 60
           +D SN +   LS  +F   AI VPI SHF  SCS CD+ H RP+ V+VQLSLS++A LSF
Sbjct: 38  VDQSNLWRTGLSWSIFFVLAIGVPILSHFLFSCSSCDDKHARPYDVIVQLSLSSLAALSF 97

Query: 61  GCLSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLKRSMELISFFLLPCFMAEAAYKIW 120
             LSA ++ +GL R LFLDKLC+ S K R  Y++QL RSM+L+S F+LPCF  E AYKIW
Sbjct: 98  ISLSALVKKYGLRRSLFLDKLCDVSEKVRLGYTQQLHRSMKLLSLFVLPCFAVEIAYKIW 157

Query: 121 WYVSAAYEIPYYGNMYLSYITSCTLELFSWLYRTSIFFFVCILFRLVCRLQMIRLEDFVS 180
           WY++ A +IPY GN+YLS+  +CTLEL SWLYRT+IF  VC+LFRL+C +Q++RLEDF  
Sbjct: 158 WYITGATQIPYLGNIYLSHAIACTLELCSWLYRTAIFLLVCVLFRLICHMQILRLEDFAQ 217

Query: 181 VFHRESDVGTILMQHLGLRRTLTIISHRFRVFMFLSLILVTASQFIFLLMTTRSHALANL 240
           VF +ESDVG++L +HL +RR L IISHRFRVF+  SLILVTASQ   LL+TTRS A   +
Sbjct: 218 VFQKESDVGSVLKEHLRIRRNLRIISHRFRVFILSSLILVTASQLASLLITTRSSAKVTI 277

Query: 241 SKTGQLALCSISLVTGLFICLRSAAKISHKAQSITCLAAKWHVSAAINTFDDLDNETPTT 300
            K G+LALCSISLVTGL ICLRSA KI+HKAQS+TCLAAKWHV A I+TFD  D ETPT 
Sbjct: 278 YKAGELALCSISLVTGLGICLRSATKITHKAQSVTCLAAKWHVCATIDTFDATDGETPTI 337

Query: 301 SVIATFEF------NSDDDEDDDEDDEDDMKLMPVFAHTISFQKRQALVTYLRNNKAGIT 360
              +   F       SDD+E D +D  D+ K++P++AHTISF KRQALVTYL NN+AGIT
Sbjct: 338 RAASAQVFPVNTNWGSDDEEGDGDDALDNTKMIPIYAHTISFHKRQALVTYLENNRAGIT 397

Query: 361 VYGFVVDRTWLKSVFAIELALVLWLLNKTV 385
           V+GF++DRTWL ++F +E++LVLWLL+KT+
Sbjct: 398 VFGFMLDRTWLHTIFGVEMSLVLWLLSKTI 427

The following BLAST results are available for this feature:

BLAST of CmaCh18G005860.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G005860.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3M6_CUCSA	1.9e-168	81.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699550 PE=4 SV=1	[more]
F6I7J7_VITVI	5.5e-128	61.32	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0523g00050 PE=4 SV=...	[more]
A0A061GNZ3_THECC	3.6e-127	59.69	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_030325 PE=4 SV=1	[more]
A0A059CB84_EUCGR	1.4e-126	59.54	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03959 PE=4 SV=1	[more]
A0A061GG46_THECC	2.0e-125	59.38	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_030325 PE=4 SV=1	[more]

BLAST of CmaCh18G005860.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20300.1	3.3e-116	55.28	Protein of unknown function (DUF3537)	[more]
AT4G22270.1	1.3e-115	56.27	Protein of unknown function (DUF3537)	[more]
AT1G50630.1	5.0e-112	52.59	Protein of unknown function (DUF3537)	[more]
AT4G03820.2	4.2e-103	52.03	Protein of unknown function (DUF3537)	[more]
AT2G21080.1	1.4e-50	31.66	unknown protein	[more]

BLAST of CmaCh18G005860.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118168\|ref\|XP_008458982.1\|	9.9e-171	82.52	PREDICTED: uncharacterized protein LOC103498231 [Cucumis melo]	[more]
gi\|778664449\|ref\|XP_011660297.1\|	2.7e-168	81.33	PREDICTED: uncharacterized protein LOC101203162 [Cucumis sativus]	[more]
gi\|590626608\|ref\|XP_007026217.1\|	5.1e-127	59.69	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|702351502\|ref\|XP_010057868.1\|	2.0e-126	59.54	PREDICTED: uncharacterized protein LOC104445657 [Eucalyptus grandis]	[more]
gi\|731404403\|ref\|XP_003632960.2\|	4.3e-126	61.03	PREDICTED: uncharacterized protein LOC100854830 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR021924	DUF3537

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G005860	CmaCh18G005860	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005860.1	CmaCh18G005860.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005860.1.three_prime_UTR.1	CmaCh18G005860.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005860.1.CDS.4	CmaCh18G005860.1.CDS.4	CDS
CmaCh18G005860.1.CDS.3	CmaCh18G005860.1.CDS.3	CDS
CmaCh18G005860.1.CDS.2	CmaCh18G005860.1.CDS.2	CDS
CmaCh18G005860.1.CDS.1	CmaCh18G005860.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005860.1.five_prime_UTR.1	CmaCh18G005860.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G005860.1.exon.4	CmaCh18G005860.1.exon.4	exon
CmaCh18G005860.1.exon.3	CmaCh18G005860.1.exon.3	exon
CmaCh18G005860.1.exon.2	CmaCh18G005860.1.exon.2	exon
CmaCh18G005860.1.exon.1	CmaCh18G005860.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021924	Protein of unknown function DUF3537	PFAM	PF12056	DUF3537	coord: 1..371 score: 5.5E
None	No IPR available	PANTHER	PTHR31963	FAMILY NOT NAMED	coord: 1..387 score: 4.5E
None	No IPR available	PANTHER	PTHR31963:SF7	SUBFAMILY NOT NAMED	coord: 1..387 score: 4.5E