CmaCh17G011360.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G011360.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	BRCT domain DNA repair protein
Location	Cma_Chr17 : 7906696 .. 7911976 (+)
Sequence length	2661

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGGCAGCCGTCGCCGATATTCAGGCTCGGATCGTTGATCTTCATACTCCATCTTCATCGTCGGTTTCTGGTAATCATCAGTTATTTTCAACATGCTTAACTTTTAAAGCGCGCTCGATCATCAAACGACTTAGAGAGTGACTGAACCGAGCCATTTGTTAATTGCGTTATTGATTGACCATCGCTATAATTTGAACAGTGAATGTTTGTGTGTTTCATCGATGTTTGCACGTTGTCTTTCATTTTTCACGTTATGCCGTTGGCTTAGTAGTCTATTGTTTTCTTTATGGTCTTAGAATCAGAAAATGACGATTTTGGTTCGAGTTGTGATGATTGCGAACTACTACAGAATACATTGGCTTTTGAAGACAGTGTTGGATTTGACAACCACGTTGTTCGTTTGAAGAGCCCTCTCACTGATACGGAGATGGTGGATGCGCTTGATTGTTCGAAGGACTTATACATTCCTACTTTCGAGTATGAGGATGATGTCGTGCTTGATAGCGAGGACGAAGGAATTAATGGATGTCGAGTGATTAGAGTTTCCAGCAACCTGTCAAGAAATGAAGCGGGCTGGGAAGTTAAAAGTGATTCACAAGATGAGAATATGACATTGGATTTCAACTCTTCTGATCAGAAGCCATGCGATACAGGTTCATACTCCCTGCTTCAATTTGAAACTCGATATTATTAGCCATTTTTAAATATAGGGTTAAGTAATATTTTAGTATGTAATTTCAGCTTGGGCCATTTCAGTGTCTTTTCTACTCCTAAGACATCCATTCTAGTCCATATACTTCTGAAACACTACTTTTTTTTGTCAATGTACTTTCAAAAGGTTGATTTTTATCTAGTAGTTTTAAAAAAACGGAGTTCTAAGAGTACATGGACCACTGCAAATCAAAATGGACAAAATGCTAAAAGTAAACCTTTGACTTAACCCTTTTCCTGTTCTGTTCATTTTTTTTAGCATAACTTTGGTTGACTTGTCTATAAATTTGTATGAAGGGGAGCAAGTTTCTTCTAATTGTTTGAATGGGGTTGACATGGGGAAGGATTCATATCAACTTTCGCCAAGGTTAAGCTATTGCAGTTCTCAAGAACCAGGAGATTCAACCCAAGTCAATGCTCTTGGCTTTGTGGATCAGTTTGTAACTCTAAGTACTACAAATGTAAATCTTTCTCAAGGAAGAGAGGCTGCTAGAGTGCAATCTCCTCTTCTTTCAAGAATTAAGGGACCTCAAAGTTTGGCAAAGAGAATAGGTAGGAAGTCGATTGAAGAAACAAGGAACTTTGAGTGGGTTGACATTTACAATCAAGAAGCAGAATGCAACTTATTTGCCAAGTGCAAAAAGGCAACTTCTGATTTTGTTAACTGCAGAGGGCAGTCATGTGCAACCAAGCCTCAGAATATCGCAAAACTGAGCAATAAAGAAGGCGATTGTTTGCTCAAAAAGTATGAAGGTGAGGAAGCAAGTGCAGGCATTCAGTTCCAGATTGATCCAACTGCTTCAACCTTGCCACATCCAAGATTGGATATCTCTTCATCAGAGATAGATGGGATGAACAACATTGAAATAGAGAATACGTTCAACAAGGAACCAAATGCAAAAATAGCAGAGGAACAGTTTGGCTCTATGGATGATGAGGGAGATGAACTCGAAGAATTAGATATTGGTTTTAGTACCCAAATAGCTGTTGAAGCAATGGAAGCATTGTCTTATATCCCAGATAGTAACAAACTTGCCAATGCCTGCAGTCCAGAGAACGCCTTTGATAACATTTCGTGCTCTATAATTGAACATAAACCTCATTTGAATAATTCCTATCCTCAAATTATGAGAGGCGCAGTTAGAAAGTCAAAGCGAGCACTGCATTCTAAGAAGAAGCTTAATGCAAAGTGTTTGACTAGATCTCAAGCACAATATGACCGTCAGGAGTTAGAATCCGATTTGACAACTAAGAGACAAGCAAAAAGAAGTAGATTGGCGGTGAAGGGACGGTTGAATTATAGAAAGTCTCCTGATGGGAGCAATTATTCAGCCACATCTTCCAATCTACTCAGCGATATAGGTAGTTGCCAACTGATTCAGCGAGGTCTCACTAAGGGAGATCAAGTTACCATCACCAGTTTGATGGTCGGTTTATGGAGCCACCCCAGGAGGAGAAGAACACCACGCAACTTCCAAAGTCATCCAAATAAATCAAACAATCAGAACAACACTTTTTTAGCAGTTGAGGGAAGTTGCGAGAATTCCATCTTAATGAAAACTGGGACATTAGGCAGAAATTCTAACAGTAAGTCAACTGCCTTAATTAGGAGTATCAATCCGAATGTCCTGCGTGTTTGCCTAGGGATTCATGCAAGTTAAATAAGCAATGTGCAACATGTTCTTCATTAATGGTCTGTAGTGCAAAAATGTTTTCAAAATGTATTGCGTGAGACCATAAACTGTGATCACAGTTTGAGAAATTTCTGTTTATACTATGAAAATGCAGTCCAGGGAAAAATACATGCTATGTTTTACTGCAGGGAAAAATACATCAAGGTCCAGCTGCAAATTTGATATTTATCACAAAACAACACCCATAATGCTACCACAGTCATCTTCGAAAGAGCTTGCACGATTAGGTGTCTCAGAGTCGATGCCTGATCTCAGATGGAAAGATTTGAGGAGAAGAAGAACAATGGCTTTGGTAAGAGTATGTTTTAGCCAGCATTTGGATGAAGTTACCCTCAAGCAACAAAAAAAGGTAAATCTGTGCTTATCTTTTTTATGACAATCAAGTTCTTTCAAAATGTGTACTTACCATCTGGTTTCTTCTTTAATAGGTAGTCTTACAACTGGGTATATCAATTGCATCGAGTTCTGCAGATGCCACACATTTTGTAGCAGATAAGTTCGTTCGTACAAGAAACATGTTGGAGGCTATTGCTCTCGGTAAACCAGTGGTTACACACTCATGGCTTGAAAGTTGTGGACAAGCAAGCTGTTTTATTGATGAAAAGAATTATATTCTAAGAGATACTAAGAAGGAGAAGGAAATTGGTTTTAACTTGCCTGTTTCCATATCTCGTGCTACCCAATGTCCACTTCTACAGGTGAAATGTTGTTGTTTGGTTTCATATAGGCTAAGGTTTCTCTCCAAGTTGATTTTTCATTAATGCTGTAGATATTTTACTTTTTCCTCTTTGATCCTACTTAGCAGGGTCTCAGAGTCTTCGTCACCCCAAACATAAAACCTAGTAAAGAAATCATTACTAGTTTGGTAAAGATGTCTCAGGGTGAGGTACTGACTATACATGCTTGTGCATAGTTGTGATTGTTCTCAAATTACAGTACTGTTTGCAGCTGTAAATTTCTACCTCTATGTATTCTTATCCCTTTTGGTATTACAAAATTGGTCATAAATTTAAACGCCTTGCAGCCTATTGAGAGGAGTCAGATTTTCACTGGGAAGGCTGATAAGTTCCCCGACGATCTACTTATTCTTTCATGCGAAGAAGATTATGCGAATTGTGTTCCTTTCCTTAGAAAAGGTATGGATTTATCCCCTTTTTTTATAAATAAAACACCTGGTTTCTTAAAGAGTAGCTCAAGAATAATGCTAGAGCTCCTTTTTGCAGGAGCAACCATTTACAGTTCCGAGCTTCTATTGAATGGGATAGTTATCCAGAAACTTGAAAACAAACGGTTAGTATTTTCTACGCAAACCATACGTCCTGGAGGAGGTGCAAGTTATTATAAATTTTAGAACATAGACTCTAGCAATATTCAGGCTTACTAATTAGCATAATGATTCAGGAGTTGCAACCCAGTTCTCGAGCTGGTTTTATAATGAGTATAATATTAAACTATTTGACAGTCCCACTGGCTCTTTACTGAATAATAATGGTTGATGCTACCTCACTCTTAATCACAGTGATGCATCAGCAAAGTTAGATTGGAGTAAATAAGTTGGGCATTGAGAATTCTGTCAATGAGAATGGGGCAGGGGTGAAGCTAAACTAGAATAGAGAAATTTGACTGAATAATCTAGATTTTGGGAGCTAAATGTGATATGACCCACCCTTTCCAAATCAAGTTTTTTAACCTTTTGGTGATGTAATCATCACAAAAAGTTACCGCTTTGCCCTCTAACTAAATTCTCTCTTTTGTCTCTCCCTCTCCACATGATTCCAAATCAACCCATCCATAGCTTTTCTCTCTTTCGGGTCTGCATATAAAATTTCTCTCCTCTCTTTCACTCTTATCTCCGTTTCCTATTTTGTTTTCGTTTTTTGTTTTCGTACTTTTTTTAGGTTTAGGGATTAATGTTGCTTGTTTTGTGGTCTGATCTGCATGTAAAAAGGGATGGTTAAGACATTTACAAAGTAAACATAATGGCTAGATACTAGAGCTAGAATTGAGAGCTAGAAACAAGATTATGATGATAGATTGATTGCTTTGACCGTGATTCAAACCCACAAAAAAAATGTTGAAGTGAGAAAACAAAATTTTCAAGAGTTAAACTCATAAATTTTACTTTTCAAAAAAAAAAATTATGGTCCTACATATTTTGAGTTTAAAATATATAGAAAATTTTCATGAGCTAGAGACAAATTTGAATTTAGAGCAAAAGTTCATAAGTCGGTAATTTCACTCGATCATAACACAAGCAAAAGGTAGTAACACTTCAGTACTAAAGTGATTCAGTTTTCATTTGAGTTTTAGAAATTGAATCATAGGTACAATTTTCCAATTAGTATTGTATTTGTTTGAAATGACTTTCTATGAACTTAAAAACACTTTGATAAGTACTTTTAGTTCAATGAGAACGCTTTTAAGTTTTCTATAATGCTTAGTTAGCTGTAAACACTACTTCAAAAGTGATCTCAAACATCATGGAGTTAGATCATTAAGTGTGAATTTTGAAATAAGTGTTGTAAAATGTGGCATTTAGAAGTGTTTTCAAAAGAAGTGACCTCAAACCTAGTATAGTTGACTAAAGTTATATGAGTATATCATTGACCTTTTTACTCCTTTTCTCAATGAGAGTTCATCAGCTGCTGAACTTTGTTCTTTGATTTACACTTGCCATTAACAGGCATGAGCTCTTCACATATTGCACGAAAGGTTTTGATGACAGCCAAGACCAGTAGAGCAGTCGAAATACTCTGTCCTCTTCCCTCTCTACCTCCATGGAAATGCTGGTAAAAATGGCTGATGGGTACGTATTTCCACTTAAGAGATAATAGTCCTTTATATCTTCAAGTCATTTTGGAAGACAGGAA

mRNA sequence

ATGCCAATGGCAGCCGTCGCCGATATTCAGGCTCGGATCGTTGATCTTCATACTCCATCTTCATCGTCGGTTTCTGAATCAGAAAATGACGATTTTGGTTCGAGTTGTGATGATTGCGAACTACTACAGAATACATTGGCTTTTGAAGACAGTGTTGGATTTGACAACCACGTTGTTCGTTTGAAGAGCCCTCTCACTGATACGGAGATGGTGGATGCGCTTGATTGTTCGAAGGACTTATACATTCCTACTTTCGAGTATGAGGATGATGTCGTGCTTGATAGCGAGGACGAAGGAATTAATGGATGTCGAGTGATTAGAGTTTCCAGCAACCTGTCAAGAAATGAAGCGGGCTGGGAAGTTAAAAGTGATTCACAAGATGAGAATATGACATTGGATTTCAACTCTTCTGATCAGAAGCCATGCGATACAGGGGAGCAAGTTTCTTCTAATTGTTTGAATGGGGTTGACATGGGGAAGGATTCATATCAACTTTCGCCAAGGTTAAGCTATTGCAGTTCTCAAGAACCAGGAGATTCAACCCAAGTCAATGCTCTTGGCTTTGTGGATCAGTTTGTAACTCTAAGTACTACAAATGTAAATCTTTCTCAAGGAAGAGAGGCTGCTAGAGTGCAATCTCCTCTTCTTTCAAGAATTAAGGGACCTCAAAGTTTGGCAAAGAGAATAGGTAGGAAGTCGATTGAAGAAACAAGGAACTTTGAGTGGGTTGACATTTACAATCAAGAAGCAGAATGCAACTTATTTGCCAAGTGCAAAAAGGCAACTTCTGATTTTGTTAACTGCAGAGGGCAGTCATGTGCAACCAAGCCTCAGAATATCGCAAAACTGAGCAATAAAGAAGGCGATTGTTTGCTCAAAAAGTATGAAGGTGAGGAAGCAAGTGCAGGCATTCAGTTCCAGATTGATCCAACTGCTTCAACCTTGCCACATCCAAGATTGGATATCTCTTCATCAGAGATAGATGGGATGAACAACATTGAAATAGAGAATACGTTCAACAAGGAACCAAATGCAAAAATAGCAGAGGAACAGTTTGGCTCTATGGATGATGAGGGAGATGAACTCGAAGAATTAGATATTGGTTTTAGTACCCAAATAGCTGTTGAAGCAATGGAAGCATTGTCTTATATCCCAGATAGTAACAAACTTGCCAATGCCTGCAGTCCAGAGAACGCCTTTGATAACATTTCGTGCTCTATAATTGAACATAAACCTCATTTGAATAATTCCTATCCTCAAATTATGAGAGGCGCAGTTAGAAAGTCAAAGCGAGCACTGCATTCTAAGAAGAAGCTTAATGCAAAGTGTTTGACTAGATCTCAAGCACAATATGACCGTCAGGAGTTAGAATCCGATTTGACAACTAAGAGACAAGCAAAAAGAAGTAGATTGGCGGTGAAGGGACGGTTGAATTATAGAAAGTCTCCTGATGGGAGCAATTATTCAGCCACATCTTCCAATCTACTCAGCGATATAGGTAGTTGCCAACTGATTCAGCGAGGTCTCACTAAGGGAGATCAAGTTACCATCACCAGTTTGATGGTCGGTTTATGGAGCCACCCCAGGAGGAGAAGAACACCACGCAACTTCCAAAGTCATCCAAATAAATCAAACAATCAGAACAACACTTTTTTAGCAGTTGAGGGAAGTTGCGAGAATTCCATCTTAATGAAAACTGGGACATTAGGCAGAAATTCTAACAGGAAAAATACATCAAGGTCCAGCTGCAAATTTGATATTTATCACAAAACAACACCCATAATGCTACCACAGTCATCTTCGAAAGAGCTTGCACGATTAGGTGTCTCAGAGTCGATGCCTGATCTCAGATGGAAAGATTTGAGGAGAAGAAGAACAATGGCTTTGGTAAGAGTATGTTTTAGCCAGCATTTGGATGAAGTTACCCTCAAGCAACAAAAAAAGGTAGTCTTACAACTGGGTATATCAATTGCATCGAGTTCTGCAGATGCCACACATTTTGTAGCAGATAAGTTCGTTCGTACAAGAAACATGTTGGAGGCTATTGCTCTCGGTAAACCAGTGGTTACACACTCATGGCTTGAAAGTTGTGGACAAGCAAGCTGTTTTATTGATGAAAAGAATTATATTCTAAGAGATACTAAGAAGGAGAAGGAAATTGGTTTTAACTTGCCTGTTTCCATATCTCGTGCTACCCAATGTCCACTTCTACAGGGTCTCAGAGTCTTCGTCACCCCAAACATAAAACCTAGTAAAGAAATCATTACTAGTTTGGTAAAGATGTCTCAGGGTGAGCCTATTGAGAGGAGTCAGATTTTCACTGGGAAGGCTGATAAGTTCCCCGACGATCTACTTATTCTTTCATGCGAAGAAGATTATGCGAATTGTGTTCCTTTCCTTAGAAAAGGAGCAACCATTTACAGTTCCGAGCTTCTATTGAATGGGATAGTTATCCAGAAACTTGAAAACAAACGGCATGAGCTCTTCACATATTGCACGAAAGGTTTTGATGACAGCCAAGACCAGTAGAGCAGTCGAAATACTCTGTCCTCTTCCCTCTCTACCTCCATGGAAATGCTGGTAAAAATGGCTGATGGGTACGTATTTCCACTTAAGAGATAATAGTCCTTTATATCTTCAAGTCATTTTGGAAGACAGGAA

Coding sequence (CDS)

ATGCCAATGGCAGCCGTCGCCGATATTCAGGCTCGGATCGTTGATCTTCATACTCCATCTTCATCGTCGGTTTCTGAATCAGAAAATGACGATTTTGGTTCGAGTTGTGATGATTGCGAACTACTACAGAATACATTGGCTTTTGAAGACAGTGTTGGATTTGACAACCACGTTGTTCGTTTGAAGAGCCCTCTCACTGATACGGAGATGGTGGATGCGCTTGATTGTTCGAAGGACTTATACATTCCTACTTTCGAGTATGAGGATGATGTCGTGCTTGATAGCGAGGACGAAGGAATTAATGGATGTCGAGTGATTAGAGTTTCCAGCAACCTGTCAAGAAATGAAGCGGGCTGGGAAGTTAAAAGTGATTCACAAGATGAGAATATGACATTGGATTTCAACTCTTCTGATCAGAAGCCATGCGATACAGGGGAGCAAGTTTCTTCTAATTGTTTGAATGGGGTTGACATGGGGAAGGATTCATATCAACTTTCGCCAAGGTTAAGCTATTGCAGTTCTCAAGAACCAGGAGATTCAACCCAAGTCAATGCTCTTGGCTTTGTGGATCAGTTTGTAACTCTAAGTACTACAAATGTAAATCTTTCTCAAGGAAGAGAGGCTGCTAGAGTGCAATCTCCTCTTCTTTCAAGAATTAAGGGACCTCAAAGTTTGGCAAAGAGAATAGGTAGGAAGTCGATTGAAGAAACAAGGAACTTTGAGTGGGTTGACATTTACAATCAAGAAGCAGAATGCAACTTATTTGCCAAGTGCAAAAAGGCAACTTCTGATTTTGTTAACTGCAGAGGGCAGTCATGTGCAACCAAGCCTCAGAATATCGCAAAACTGAGCAATAAAGAAGGCGATTGTTTGCTCAAAAAGTATGAAGGTGAGGAAGCAAGTGCAGGCATTCAGTTCCAGATTGATCCAACTGCTTCAACCTTGCCACATCCAAGATTGGATATCTCTTCATCAGAGATAGATGGGATGAACAACATTGAAATAGAGAATACGTTCAACAAGGAACCAAATGCAAAAATAGCAGAGGAACAGTTTGGCTCTATGGATGATGAGGGAGATGAACTCGAAGAATTAGATATTGGTTTTAGTACCCAAATAGCTGTTGAAGCAATGGAAGCATTGTCTTATATCCCAGATAGTAACAAACTTGCCAATGCCTGCAGTCCAGAGAACGCCTTTGATAACATTTCGTGCTCTATAATTGAACATAAACCTCATTTGAATAATTCCTATCCTCAAATTATGAGAGGCGCAGTTAGAAAGTCAAAGCGAGCACTGCATTCTAAGAAGAAGCTTAATGCAAAGTGTTTGACTAGATCTCAAGCACAATATGACCGTCAGGAGTTAGAATCCGATTTGACAACTAAGAGACAAGCAAAAAGAAGTAGATTGGCGGTGAAGGGACGGTTGAATTATAGAAAGTCTCCTGATGGGAGCAATTATTCAGCCACATCTTCCAATCTACTCAGCGATATAGGTAGTTGCCAACTGATTCAGCGAGGTCTCACTAAGGGAGATCAAGTTACCATCACCAGTTTGATGGTCGGTTTATGGAGCCACCCCAGGAGGAGAAGAACACCACGCAACTTCCAAAGTCATCCAAATAAATCAAACAATCAGAACAACACTTTTTTAGCAGTTGAGGGAAGTTGCGAGAATTCCATCTTAATGAAAACTGGGACATTAGGCAGAAATTCTAACAGGAAAAATACATCAAGGTCCAGCTGCAAATTTGATATTTATCACAAAACAACACCCATAATGCTACCACAGTCATCTTCGAAAGAGCTTGCACGATTAGGTGTCTCAGAGTCGATGCCTGATCTCAGATGGAAAGATTTGAGGAGAAGAAGAACAATGGCTTTGGTAAGAGTATGTTTTAGCCAGCATTTGGATGAAGTTACCCTCAAGCAACAAAAAAAGGTAGTCTTACAACTGGGTATATCAATTGCATCGAGTTCTGCAGATGCCACACATTTTGTAGCAGATAAGTTCGTTCGTACAAGAAACATGTTGGAGGCTATTGCTCTCGGTAAACCAGTGGTTACACACTCATGGCTTGAAAGTTGTGGACAAGCAAGCTGTTTTATTGATGAAAAGAATTATATTCTAAGAGATACTAAGAAGGAGAAGGAAATTGGTTTTAACTTGCCTGTTTCCATATCTCGTGCTACCCAATGTCCACTTCTACAGGGTCTCAGAGTCTTCGTCACCCCAAACATAAAACCTAGTAAAGAAATCATTACTAGTTTGGTAAAGATGTCTCAGGGTGAGCCTATTGAGAGGAGTCAGATTTTCACTGGGAAGGCTGATAAGTTCCCCGACGATCTACTTATTCTTTCATGCGAAGAAGATTATGCGAATTGTGTTCCTTTCCTTAGAAAAGGAGCAACCATTTACAGTTCCGAGCTTCTATTGAATGGGATAGTTATCCAGAAACTTGAAAACAAACGGCATGAGCTCTTCACATATTGCACGAAAGGTTTTGATGACAGCCAAGACCAGTAG

Protein sequence

MPMAAVADIQARIVDLHTPSSSSVSESENDDFGSSCDDCELLQNTLAFEDSVGFDNHVVRLKSPLTDTEMVDALDCSKDLYIPTFEYEDDVVLDSEDEGINGCRVIRVSSNLSRNEAGWEVKSDSQDENMTLDFNSSDQKPCDTGEQVSSNCLNGVDMGKDSYQLSPRLSYCSSQEPGDSTQVNALGFVDQFVTLSTTNVNLSQGREAARVQSPLLSRIKGPQSLAKRIGRKSIEETRNFEWVDIYNQEAECNLFAKCKKATSDFVNCRGQSCATKPQNIAKLSNKEGDCLLKKYEGEEASAGIQFQIDPTASTLPHPRLDISSSEIDGMNNIEIENTFNKEPNAKIAEEQFGSMDDEGDELEELDIGFSTQIAVEAMEALSYIPDSNKLANACSPENAFDNISCSIIEHKPHLNNSYPQIMRGAVRKSKRALHSKKKLNAKCLTRSQAQYDRQELESDLTTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSDIGSCQLIQRGLTKGDQVTITSLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNSNRKNTSRSSCKFDIYHKTTPIMLPQSSSKELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQKLENKRHELFTYCTKGFDDSQDQ

Homology

[Close]

BLAST of CmaCh17G011360.1 vs. Swiss-Prot
Match: PAXI1_BOVIN (PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-25
Identity = 60/193 (31.09%), Postives = 108/193 (55.96%), Query Frame = 1


Query: 639 DEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCG 698
           + V ++Q  K +  LG  +A S+   TH +A K  RT   L AI++ K +VT  WLE C 
Sbjct: 790 EPVQVQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECF 849

Query: 699 QASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSL 758
           +   F+DE+NY+LRD + E    F+L  S+ RA   PL +    ++TP I PS   + ++
Sbjct: 850 KCQKFVDEQNYLLRDAEAEVLFSFSLEESLRRAHASPLFKAKYFYITPGICPSLSTMKAI 909

Query: 759 VKMSQGEPIERS----QIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLN 818
           V+ + G+ + R     ++   K +K   +++++SCE D   C  +  +G  ++++E +L 
Sbjct: 910 VECAGGKVLSRQPSFRKLMEHKQNKSLSEIVLISCENDLHLCREYFARGIDVHNAEFVLT 969

Query: 819 GIVIQKLENKRHE 828
           G++ Q L+ + ++
Sbjct: 970 GVLTQTLDYESYK 982

[Close]

BLAST of CmaCh17G011360.1 vs. Swiss-Prot
Match: PAXI1_HUMAN (PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-25
Identity = 60/193 (31.09%), Postives = 107/193 (55.44%), Query Frame = 1


Query: 639  DEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCG 698
            + V ++Q  K +  LG  +A S+   TH +A K  RT   L AI++ K +VT  WLE C 
Sbjct: 875  EPVQVQQYIKKLYILGGEVAESAQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECF 934

Query: 699  QASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSL 758
            +   FIDE+NYILRD + E    F+L  S+ RA   PL +    ++TP I PS   + ++
Sbjct: 935  RCQKFIDEQNYILRDAEAEVLFSFSLEESLKRAHVSPLFKAKYFYITPGICPSLSTMKAI 994

Query: 759  VKMSQGEPIERS----QIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLN 818
            V+ + G+ + +     ++   K +    +++++SCE D   C  +  +G  ++++E +L 
Sbjct: 995  VECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGIDVHNAEFVLT 1054

Query: 819  GIVIQKLENKRHE 828
            G++ Q L+ + ++
Sbjct: 1055 GVLTQTLDYESYK 1067

[Close]

BLAST of CmaCh17G011360.1 vs. Swiss-Prot
Match: PAXI1_MOUSE (PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.4e-25
Identity = 69/238 (28.99%), Postives = 123/238 (51.68%), Query Frame = 1


Query: 597  PQSSSKELARLGVSESMPDLRWKDL---RRRRTMALVRVCFSQHLDEVTLKQQKKVVLQL 656
            P+    E+A   +  S    R +DL    ++ T  L  +      + V ++Q  K +  L
Sbjct: 819  PKLKPNEVAN--IQPSSKRARIEDLPPPTKKLTPELTPLVLFTGFEPVQVQQYIKKLYIL 878

Query: 657  GISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFIDEKNYILRD 716
            G  +A  +   TH +A K  RT   L AI++ K +VT  WLE C +   FIDE+NYILRD
Sbjct: 879  GGEVAECTKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQTFIDEQNYILRD 938

Query: 717  TKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQGEPIERS--- 776
             + E    F+L  S+ RA   PL +    ++TP I PS   + ++V+ + G+ + +    
Sbjct: 939  AEAEVLFSFSLEESLKRAHVSPLFKTKYFYITPGICPSLATMKAIVECAGGKVLAKQPSF 998

Query: 777  -QIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQKLENKRHE 828
             ++   K +K   +++++SCE D   C  +  +G  ++++E +L G++ Q L+ + ++
Sbjct: 999  RKLMEHKQNKSLSEIILISCENDLHLCREYFARGIDVHNAEFVLTGVLTQTLDYESYK 1054

[Close]

BLAST of CmaCh17G011360.1 vs. Swiss-Prot
Match: MDC1_PIG (Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa GN=MDC1 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.3e-22
Identity = 58/185 (31.35%), Postives = 99/185 (53.51%), Query Frame = 1


Query: 647  KKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFIDE 706
            ++ VL LG S+ASS A+A+H V D+  RT   L A+  G P+++  WL    +A CF+  
Sbjct: 1859 ERAVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPP 1918

Query: 707  KNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQGEP 766
              Y++ D ++EK  GF+L  ++SRA +  LL+G  + VTP ++P    +  ++    G  
Sbjct: 1919 DEYVVTDPEQEKNFGFSLREALSRARERKLLEGYEIHVTPGVQPPPPQMGEIISCCGG-- 1978

Query: 767  IERSQIFTGKADKFPDDLLILSCEEDYANC-VPFLRKGATIYSSELLLNGIVIQKLENKR 826
                 +       +    ++++C +D+  C VPF R G  + S E LL G++ Q+ + + 
Sbjct: 1979 ----TVLPSMPRSYKPQRVVITCSQDFPRCSVPF-RLGLPVLSPEFLLTGVLKQEAKPEA 2036

Query: 827  HELFT 831
              L T
Sbjct: 2039 FVLST 2036

[Close]

BLAST of CmaCh17G011360.1 vs. Swiss-Prot
Match: MDC1_MACMU (Mediator of DNA damage checkpoint protein 1 OS=Macaca mulatta GN=MDC1 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-22
Identity = 54/176 (30.68%), Postives = 94/176 (53.41%), Query Frame = 1


Query: 645  QQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFI 704
            Q ++ VL LG S+A S+A+A+H V D+  RT   L A+  G P+++  WL    +A CF+
Sbjct: 1988 QGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFL 2047

Query: 705  DEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQG 764
                Y++ D ++EK  GF+L  ++SRA +  LL+G  ++VTP ++P    +  ++    G
Sbjct: 2048 PPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIYVTPGVQPPPPQMGEIISCCGG 2107

Query: 765  EPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQK 821
                           +    ++++C +D+  C   LR G  + S E LL G++ Q+
Sbjct: 2108 ------TYLPSMPRSYKPQRVVITCPQDFPRCSVPLRVGLPLLSPEFLLTGVLKQE 2157

[Close]

BLAST of CmaCh17G011360.1 vs. TrEMBL
Match: A0A0A0K7G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390130 PE=4 SV=1)

HSP 1 Score: 1176.0 bits (3041), Expect = 0.0e+00
Identity = 628/819 (76.68%), Postives = 682/819 (83.27%), Query Frame = 1


Query: 24  VSESENDDFGSSCDDCELLQNTLAFEDSVGFDNHVVRLKSPLTDTEMVDALD-CSKDLYI 83
           VS+  NDD G S DD ELLQNTL+FEDSVGFDN VVRL+SP  DTEMV  LD CS++L I
Sbjct: 2   VSKLGNDDSGGSFDDFELLQNTLSFEDSVGFDNRVVRLESPFVDTEMVYGLDDCSENLCI 61

Query: 84  PTFEYEDDVVLDSEDEGINGCRVIRVSSNLSRNEAGWEVKSDSQDENMTLDFNSSDQKPC 143
           PTFEYEDDVVLDSEDEGING RVIRVSS+LSRNEA  EVKSD+Q+ENM LDF+SSD KPC
Sbjct: 62  PTFEYEDDVVLDSEDEGINGSRVIRVSSSLSRNEAEQEVKSDAQEENMVLDFHSSDHKPC 121

Query: 144 DTGEQVSSNCLNGVDMGKDSYQLSPRLSYCSSQEPGDSTQVNALGFVDQFVTLSTTNVNL 203
           D GEQVSSNC NG+DM KDS QLS RLSYCSSQEPG+STQV A+GFVD FV LSTTNVN 
Sbjct: 122 DAGEQVSSNCFNGLDMEKDSSQLSTRLSYCSSQEPGESTQVKAIGFVDHFVKLSTTNVNP 181

Query: 204 SQG---REAARVQSPLLSRIKGPQSLAKRIGRKSIEETRNFEWVDIYNQEAECNLFAKCK 263
           SQG   R+AARVQSP+LSRIKGPQSLAKRIGRKSI+ET NFEWVDI NQEAECN F KCK
Sbjct: 182 SQGIGQRKAARVQSPILSRIKGPQSLAKRIGRKSIDETGNFEWVDINNQEAECNSFGKCK 241

Query: 264 KATSDFVNCRGQSCATKPQNIAKLSNKEGDCLLKKYEG-EEASAGIQFQIDPTASTLPHP 323
           KA+SD  NCRGQS  TKP N+AKLSN   DCLLK+YE  EEASAGI+FQ D TAST PHP
Sbjct: 242 KASSDLSNCRGQSYTTKPHNMAKLSNIR-DCLLKRYEDKEEASAGIKFQTDSTASTFPHP 301

Query: 324 RLDISSSEIDGMNNIEIENTFNKEPNAKIAEEQFGSMDDEGDELEELDIGFSTQIAVEAM 383
           RLDI S E DGM++IEIEN  N++ NAK+ E Q   MDDE D  +ELDIGFSTQIA EAM
Sbjct: 302 RLDIYSLETDGMSSIEIENRSNEKTNAKLVEGQLEFMDDERDAPDELDIGFSTQIAAEAM 361

Query: 384 EALSYIPDSNKLANACSPENAFDNISCSIIEHKPHLNNSYPQIMRGAVRKSKRALHSKKK 443
           EAL YIPD++ LANACS ENA D++SCS+IEHKPHLN+SYPQ + GA  KSKR L SK+K
Sbjct: 362 EALCYIPDNDTLANACSSENALDSVSCSMIEHKPHLNSSYPQTIGGADGKSKRTLKSKRK 421

Query: 444 LNAKCLTRSQAQYDRQELESDLTTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSD 503
           LNAK L  S                          KG+ NYRKSPD SNY+AT SNLLS+
Sbjct: 422 LNAKYLNTS--------------------------KGQSNYRKSPDESNYTATPSNLLSE 481

Query: 504 IGSCQLIQRGLTKGDQVTITSLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSC 563
            GSCQL QRGLT GDQV+ T LMVGL SHPR RRTPRN QSHPN+S NQNNT LAV+GSC
Sbjct: 482 TGSCQLSQRGLTVGDQVS-TRLMVGLCSHPRGRRTPRNIQSHPNRSKNQNNTSLAVDGSC 541

Query: 564 ENSILMKTGTLGRNSNRKNTSRSSCKFDIYHKTTP-IMLPQSSSKELARLGVSESMPDLR 623
            NSILMK G +GRNSNRKNTSRS  KF +YH T+  IMLPQSSSKELARLGVSESMPDL+
Sbjct: 542 NNSILMKNGKVGRNSNRKNTSRSRSKFKVYHNTSRRIMLPQSSSKELARLGVSESMPDLK 601

Query: 624 WKDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRN 683
           WKDLRRRRTMALVRVCFSQHLDEVTLKQQK+VVLQLGISIASSS DATHFVADKFVRTRN
Sbjct: 602 WKDLRRRRTMALVRVCFSQHLDEVTLKQQKRVVLQLGISIASSSVDATHFVADKFVRTRN 661

Query: 684 MLEAIALGKPVVTHSWLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLL 743
           MLEAIALGKPVVTHSWLESCGQASCFIDEK YILRDTKKEKEIGF+LPVS+SRATQCPLL
Sbjct: 662 MLEAIALGKPVVTHSWLESCGQASCFIDEKKYILRDTKKEKEIGFSLPVSLSRATQCPLL 721

Query: 744 QGLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCV 803
           QG +V VT NI+P KEII SLVKMSQGEPIE SQIFTGK +KFP++LLILSCEEDYA+CV
Sbjct: 722 QGFKVLVTQNIRPGKEIIASLVKMSQGEPIEMSQIFTGKNEKFPNNLLILSCEEDYADCV 781

Query: 804 PFLRKGATIYSSELLLNGIVIQKLENKRHELFTYCTKGF 837
            FL+KGA +YSSELLLNGIVIQKLENKRHELFT  TK F
Sbjct: 782 HFLKKGAKVYSSELLLNGIVIQKLENKRHELFTDSTKRF 792

[Close]

BLAST of CmaCh17G011360.1 vs. TrEMBL
Match: B9S3X8_RICCO (Pax transcription activation domain interacting protein, putative OS=Ricinus communis GN=RCOM_0556830 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.3e-86
Identity = 179/313 (57.19%), Postives = 217/313 (69.33%), Query Frame = 1


Query: 519 SLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNSNRKNT 578
           SL    WS P+ +R PR   SH N++NN +   + ++               R    K  
Sbjct: 628 SLDFNAWSCPKGKRMPRRRPSHLNEANNPSILCIKID---------------RKEGHKKP 687

Query: 579 SRSSCKFDIYHKTTPIMLPQSSS-KELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQH 638
                    Y+K    +LP+SS  KEL RLG+ E  PD  WKDLR+RR M+ V+V FSQH
Sbjct: 688 ---------YNK----ILPKSSLLKELIRLGIQEPKPDFTWKDLRKRRDMSHVQVLFSQH 747

Query: 639 LDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESC 698
           LD+  +KQQKK+  +LGISIAS S +ATHF+ADKFVRTRNM EAIA GKPVVTH WLESC
Sbjct: 748 LDDDIIKQQKKITARLGISIASCSMNATHFIADKFVRTRNMFEAIAHGKPVVTHLWLESC 807

Query: 699 GQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITS 758
           GQASC IDEKNYILRD KKEKEIGF++P S++RA+Q PLL+G RV +TPNIKP  E+ITS
Sbjct: 808 GQASCLIDEKNYILRDAKKEKEIGFSMPASLARASQHPLLKGRRVLITPNIKPDVEMITS 867

Query: 759 LVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIV 818
           L+K   G+ ++  QI      K PDDLLILSCEED++ CVPFL KGA +YSSELLLNGIV
Sbjct: 868 LIKAVHGQVLQNFQI---SDLKIPDDLLILSCEEDHSICVPFLDKGAAVYSSELLLNGIV 909

Query: 819 IQKLENKRHELFT 831
           IQK E +RH+LFT
Sbjct: 928 IQKFEYERHQLFT 909

[Close]

BLAST of CmaCh17G011360.1 vs. TrEMBL
Match: A0A067JPU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22020 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 182/331 (54.98%), Postives = 227/331 (68.58%), Query Frame = 1


Query: 501 SCQLIQRGLTKGDQVTITS-LMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCE 560
           S Q  QR L   +  ++TS L +  W +P+ +RT R    H N +NNQ  +F+A+     
Sbjct: 653 STQQNQRSL---EVASLTSYLNLNAWMYPKGKRTLRKRPRHSNGANNQYTSFIAI----- 712

Query: 561 NSILMKTGTLGRNSNRKNTSRSSCKFDIYHKTTPIMLPQSSS-KELARLGVSESMPDLRW 620
                         NRK           Y K     LP+SS  KEL RLG+ +  PD +W
Sbjct: 713 --------------NRKGD---------YKKPFNKNLPKSSFLKELIRLGIPDPKPDSKW 772

Query: 621 KDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNM 680
           KDLR RR  A V+V FSQHLD+  +KQQKK++ +LGISIAS S +ATHF+ADKFVRTRNM
Sbjct: 773 KDLRNRRDKAYVQVLFSQHLDDDIIKQQKKILGRLGISIASCSMNATHFIADKFVRTRNM 832

Query: 681 LEAIALGKPVVTHSWLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQ 740
           LE IA+GKPVV H WLESCGQA+C IDEKNYILRD KKEKEIGF++P+S++RA+Q PLL+
Sbjct: 833 LETIAVGKPVVNHLWLESCGQANCLIDEKNYILRDAKKEKEIGFSMPISLARASQHPLLK 892

Query: 741 GLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVP 800
           G R+ +TPNIKP KE+ITSLVK   G+ +E+ QI    A K P++LLIL+C+ED+A C+P
Sbjct: 893 GRRILITPNIKPEKEMITSLVKAVHGQVVEKDQI---SALKIPENLLILTCKEDHAICLP 949

Query: 801 FLRKGATIYSSELLLNGIVIQKLENKRHELF 830
           FL KGA  YSSELLLNGIVIQKLE +R  LF
Sbjct: 953 FLNKGAAAYSSELLLNGIVIQKLEYERSCLF 949

[Close]

BLAST of CmaCh17G011360.1 vs. TrEMBL
Match: B9I9Y2_POPTR (BRCT domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s13050g PE=4 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 2.4e-83
Identity = 166/240 (69.17%), Postives = 194/240 (80.83%), Query Frame = 1


Query: 590 KTTPIMLPQSSS-KELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQHLDEVTLKQQKK 649
           K   I LP+SS  K+L RLG  +S+P  RWKDLR+RR  A + V FSQHL +  ++QQKK
Sbjct: 651 KPLNINLPRSSPMKKLIRLGNPKSLPGSRWKDLRKRRDTAYLGVLFSQHLGDDIIRQQKK 710

Query: 650 VVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFIDEKN 709
           ++ +LGIS+ASS ADATHFV D+FVRTRNMLEAIALGKPVVTH WLESCGQAS  IDEKN
Sbjct: 711 ILARLGISVASSLADATHFVVDRFVRTRNMLEAIALGKPVVTHLWLESCGQASLLIDEKN 770

Query: 710 YILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQGEPIE 769
           +ILRD KKEK+IGF+LPVS++RA Q PLL+G RVF+TPNIKP KE+ITSLV    G+ +E
Sbjct: 771 FILRDAKKEKDIGFSLPVSLARANQQPLLKGQRVFITPNIKPEKEMITSLVNALHGQIME 830

Query: 770 RSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQKLENKRHEL 829
           +SQIF   A K PDDLLILSCEED+A CVP L KGA +YSSELLLNGIVIQKLE +R EL
Sbjct: 831 KSQIF---ALKIPDDLLILSCEEDHAICVPLLDKGAAVYSSELLLNGIVIQKLEYERSEL 887

[Close]

BLAST of CmaCh17G011360.1 vs. TrEMBL
Match: A0A067HH66_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002032mg PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.3e-83
Identity = 187/376 (49.73%), Postives = 238/376 (63.30%), Query Frame = 1


Query: 461 TTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSDIGSCQLIQRGLTKGDQVTITSL 520
           T +     S  A +G  +Y KS  G+ Y++ +S      G  Q +         + +   
Sbjct: 593 TPREMQSHSNGAKEGNRSYMKSQGGAKYNSNTSFYKDMKGKPQSVN----DSSPLNLPEK 652

Query: 521 MVGLWSHPRRRRTP-RNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNSNRKNTS 580
            +G +        P  N +S           +L   GS  +S +  T    + +N  ++S
Sbjct: 653 DLGKYFDEPGSAVPFANNESAIISKEIPPGKYLEPPGSGYSSTINFT----KGTNASSSS 712

Query: 581 RSSCKFDIYHKTTPIMLPQSSS-KELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQHL 640
           R   K+  + K     LP+SS  KEL RL VSE +PD  WKDLRRRR M+ VRV FSQHL
Sbjct: 713 RVPSKY--HRKPLTRNLPKSSLLKELIRLDVSELIPDFTWKDLRRRRDMSHVRVLFSQHL 772

Query: 641 DEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCG 700
           D+  +K+QKK+  +LGISIA+   DATHF+AD+FVRTRNM+E IALGKPVVTH WLESCG
Sbjct: 773 DDDVIKRQKKISARLGISIATCPGDATHFIADRFVRTRNMMETIALGKPVVTHLWLESCG 832

Query: 701 QASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSL 760
           QASC IDEKNYILRD KKE+EIGF++PV+ +RA   PLL+G RVF+T +IKP KE+IT L
Sbjct: 833 QASCLIDEKNYILRDAKKEREIGFSMPVTYARARHHPLLKGQRVFITTSIKPDKEMITGL 892

Query: 761 VKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVI 820
           VK   G+ I+ SQ+   K +KF ++ LILSCEED+A CVPFL KG   YSSELLLNGIVI
Sbjct: 893 VKAVHGQVIDVSQVSAVKEEKFQENPLILSCEEDHAICVPFLDKGIAAYSSELLLNGIVI 952

Query: 821 QKLENKRHELFTYCTK 835
           QKLE +RH LF Y  K
Sbjct: 953 QKLEFERHRLFKYHAK 958

[Close]

BLAST of CmaCh17G011360.1 vs. TAIR10
Match: AT4G03130.1 (AT4G03130.1 BRCT domain-containing DNA repair protein)

HSP 1 Score: 270.0 bits (689), Expect = 4.9e-72
Identity = 155/329 (47.11%), Postives = 212/329 (64.44%), Query Frame = 1


Query: 515 VTITSLMVGL--WSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKT-GTLGR 574
           V++ + ++ L  W HPR +R+ R  Q H           L  + S  N++     G+L  
Sbjct: 429 VSVKTCLLNLCEWRHPRAKRS-RLMQRHHVPPRRSWGASLVKDRSETNTLSSSLRGSLSG 488

Query: 575 NSNRKNTSRSSCKFDIYHKTTPIMLPQSS-----SKELARLGVSESMP----------DL 634
                +        ++ +  +P  +   S     +K+  RL + + +           D 
Sbjct: 489 TRQASSCQSGVIDLNVAYHASPRKIYDGSHESPCNKDFPRLFLQKELTTSLGGPGKIGDF 548

Query: 635 RWKDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTR 694
            WKDLR+RR +A VRV FSQ+LD+ T+KQQKK++++LGIS ASSSAD+THF+AD+F RTR
Sbjct: 549 VWKDLRKRRNLAHVRVLFSQNLDDETVKQQKKIMVRLGISPASSSADSTHFIADRFARTR 608

Query: 695 NMLEAIALGKPVVTHSWLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPL 754
           NMLEAIALGK VVT  WLESC Q  C IDEK+YILRD KKEK+ GF L  S++RA Q PL
Sbjct: 609 NMLEAIALGKFVVTPIWLESCAQTRCLIDEKSYILRDIKKEKD-GFCLLTSLARAKQHPL 668

Query: 755 LQGLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANC 814
           L+G +V +TP+IKPS+ +IT LVKM+QG+ +E S+I   +   FP+D+LILSC+ED   C
Sbjct: 669 LKGFKVCITPSIKPSRGMITDLVKMTQGQVVEASEIIAAEDRNFPEDVLILSCKEDRDFC 728

Query: 815 VPFLRKGATIYSSELLLNGIVIQKLENKR 826
           +PF+ +GA I++SELLLNGIVIQKLE  R
Sbjct: 729 LPFVNQGAVIFTSELLLNGIVIQKLEYAR 755

[Close]

BLAST of CmaCh17G011360.1 vs. TAIR10
Match: AT3G21480.1 (AT3G21480.1 BRCT domain-containing DNA repair protein)

HSP 1 Score: 255.0 bits (650), Expect = 1.6e-67
Identity = 142/306 (46.41%), Postives = 187/306 (61.11%), Query Frame = 1


Query: 526  SHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNSNRKNTSRSSCKF 585
            ++P+RRR+ R  Q   N++   ++                  T  ++          C  
Sbjct: 726  NYPKRRRSARISQDQVNEAGRSSDPAF--------------DTPAKSKTPSTNVSPICMG 785

Query: 586  DIYHKTT-PIMLPQSSSKELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQHLDEVTLK 645
            D YH+ +        +++E   L V  + P    K  R+RR +  + V FSQHLDE   K
Sbjct: 786  DEYHRLSCKDSFTSHTTREFRSLTVPVAEPISETKSTRKRRDLGSICVLFSQHLDEDVTK 845

Query: 646  QQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFI 705
             QKK++ +  IS ASS  +ATHF+AD F RTRNMLEAIA GKPVVT  WLES  Q + ++
Sbjct: 846  HQKKILARFDISEASSMKEATHFIADNFTRTRNMLEAIASGKPVVTTQWLESIDQVNIYV 905

Query: 706  DEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQG 765
            DE  YILRD+KKEKE  FN+ VS++RA Q PLLQG RVF+TPN KP+   IT+LVK   G
Sbjct: 906  DEDMYILRDSKKEKEFCFNMGVSLARARQFPLLQGRRVFITPNTKPALNTITTLVKAVHG 965

Query: 766  EPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQKLENK 825
             P+ER    +   DK P++LL+LSCEED A C+PFL +GA +YSSELLLNGIV Q+LE +
Sbjct: 966  LPVERLGRSSLSEDKVPENLLVLSCEEDRAICIPFLERGAEVYSSELLLNGIVTQRLEYE 1017

Query: 826  RHELFT 831
            R+ LFT
Sbjct: 1026 RYRLFT 1017

[Close]

BLAST of CmaCh17G011360.1 vs. NCBI nr
Match: gi|700189601|gb|KGN44834.1| (hypothetical protein Csa_7G390130 [Cucumis sativus])

HSP 1 Score: 1176.0 bits (3041), Expect = 0.0e+00
Identity = 628/819 (76.68%), Postives = 682/819 (83.27%), Query Frame = 1


Query: 24  VSESENDDFGSSCDDCELLQNTLAFEDSVGFDNHVVRLKSPLTDTEMVDALD-CSKDLYI 83
           VS+  NDD G S DD ELLQNTL+FEDSVGFDN VVRL+SP  DTEMV  LD CS++L I
Sbjct: 2   VSKLGNDDSGGSFDDFELLQNTLSFEDSVGFDNRVVRLESPFVDTEMVYGLDDCSENLCI 61

Query: 84  PTFEYEDDVVLDSEDEGINGCRVIRVSSNLSRNEAGWEVKSDSQDENMTLDFNSSDQKPC 143
           PTFEYEDDVVLDSEDEGING RVIRVSS+LSRNEA  EVKSD+Q+ENM LDF+SSD KPC
Sbjct: 62  PTFEYEDDVVLDSEDEGINGSRVIRVSSSLSRNEAEQEVKSDAQEENMVLDFHSSDHKPC 121

Query: 144 DTGEQVSSNCLNGVDMGKDSYQLSPRLSYCSSQEPGDSTQVNALGFVDQFVTLSTTNVNL 203
           D GEQVSSNC NG+DM KDS QLS RLSYCSSQEPG+STQV A+GFVD FV LSTTNVN 
Sbjct: 122 DAGEQVSSNCFNGLDMEKDSSQLSTRLSYCSSQEPGESTQVKAIGFVDHFVKLSTTNVNP 181

Query: 204 SQG---REAARVQSPLLSRIKGPQSLAKRIGRKSIEETRNFEWVDIYNQEAECNLFAKCK 263
           SQG   R+AARVQSP+LSRIKGPQSLAKRIGRKSI+ET NFEWVDI NQEAECN F KCK
Sbjct: 182 SQGIGQRKAARVQSPILSRIKGPQSLAKRIGRKSIDETGNFEWVDINNQEAECNSFGKCK 241

Query: 264 KATSDFVNCRGQSCATKPQNIAKLSNKEGDCLLKKYEG-EEASAGIQFQIDPTASTLPHP 323
           KA+SD  NCRGQS  TKP N+AKLSN   DCLLK+YE  EEASAGI+FQ D TAST PHP
Sbjct: 242 KASSDLSNCRGQSYTTKPHNMAKLSNIR-DCLLKRYEDKEEASAGIKFQTDSTASTFPHP 301

Query: 324 RLDISSSEIDGMNNIEIENTFNKEPNAKIAEEQFGSMDDEGDELEELDIGFSTQIAVEAM 383
           RLDI S E DGM++IEIEN  N++ NAK+ E Q   MDDE D  +ELDIGFSTQIA EAM
Sbjct: 302 RLDIYSLETDGMSSIEIENRSNEKTNAKLVEGQLEFMDDERDAPDELDIGFSTQIAAEAM 361

Query: 384 EALSYIPDSNKLANACSPENAFDNISCSIIEHKPHLNNSYPQIMRGAVRKSKRALHSKKK 443
           EAL YIPD++ LANACS ENA D++SCS+IEHKPHLN+SYPQ + GA  KSKR L SK+K
Sbjct: 362 EALCYIPDNDTLANACSSENALDSVSCSMIEHKPHLNSSYPQTIGGADGKSKRTLKSKRK 421

Query: 444 LNAKCLTRSQAQYDRQELESDLTTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSD 503
           LNAK L  S                          KG+ NYRKSPD SNY+AT SNLLS+
Sbjct: 422 LNAKYLNTS--------------------------KGQSNYRKSPDESNYTATPSNLLSE 481

Query: 504 IGSCQLIQRGLTKGDQVTITSLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSC 563
            GSCQL QRGLT GDQV+ T LMVGL SHPR RRTPRN QSHPN+S NQNNT LAV+GSC
Sbjct: 482 TGSCQLSQRGLTVGDQVS-TRLMVGLCSHPRGRRTPRNIQSHPNRSKNQNNTSLAVDGSC 541

Query: 564 ENSILMKTGTLGRNSNRKNTSRSSCKFDIYHKTTP-IMLPQSSSKELARLGVSESMPDLR 623
            NSILMK G +GRNSNRKNTSRS  KF +YH T+  IMLPQSSSKELARLGVSESMPDL+
Sbjct: 542 NNSILMKNGKVGRNSNRKNTSRSRSKFKVYHNTSRRIMLPQSSSKELARLGVSESMPDLK 601

Query: 624 WKDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRN 683
           WKDLRRRRTMALVRVCFSQHLDEVTLKQQK+VVLQLGISIASSS DATHFVADKFVRTRN
Sbjct: 602 WKDLRRRRTMALVRVCFSQHLDEVTLKQQKRVVLQLGISIASSSVDATHFVADKFVRTRN 661

Query: 684 MLEAIALGKPVVTHSWLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLL 743
           MLEAIALGKPVVTHSWLESCGQASCFIDEK YILRDTKKEKEIGF+LPVS+SRATQCPLL
Sbjct: 662 MLEAIALGKPVVTHSWLESCGQASCFIDEKKYILRDTKKEKEIGFSLPVSLSRATQCPLL 721

Query: 744 QGLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCV 803
           QG +V VT NI+P KEII SLVKMSQGEPIE SQIFTGK +KFP++LLILSCEEDYA+CV
Sbjct: 722 QGFKVLVTQNIRPGKEIIASLVKMSQGEPIEMSQIFTGKNEKFPNNLLILSCEEDYADCV 781

Query: 804 PFLRKGATIYSSELLLNGIVIQKLENKRHELFTYCTKGF 837
            FL+KGA +YSSELLLNGIVIQKLENKRHELFT  TK F
Sbjct: 782 HFLKKGAKVYSSELLLNGIVIQKLENKRHELFTDSTKRF 792

[Close]

BLAST of CmaCh17G011360.1 vs. NCBI nr
Match: gi|659101097|ref|XP_008451424.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103492723 [Cucumis melo])

HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 626/845 (74.08%), Postives = 695/845 (82.25%), Query Frame = 1


Query: 1   MPMAAVADIQARIVDLHTPSSSSVSESENDDFGSSCDDCELLQNTLAFEDSVGFDNHVVR 60
           MPM ++A+IQ  IVDLH+PSSSSVS+  NDD G S DD ELLQNTL FED VGFDN VVR
Sbjct: 1   MPMTSIANIQTPIVDLHSPSSSSVSD--NDDSGGSFDDFELLQNTLPFEDIVGFDNRVVR 60

Query: 61  LKSPLTDTEMVDALD-CSKDLYIPTFEYEDDVVLDSEDEGINGCRVIRVSSNLSRNEAGW 120
           L+SP  DTE V  LD CS++L IPTFEYEDDVVLDSEDEGING RVIRVSS+LSRNEA  
Sbjct: 61  LESPFNDTETVAGLDDCSENLCIPTFEYEDDVVLDSEDEGINGSRVIRVSSSLSRNEAEQ 120

Query: 121 EVKSDSQDENMTLDFNSSDQKPCDTGEQVSSNCLNGVDMGKDSYQLSPRLSYCSSQEPGD 180
           EVKSD+Q+ENM LDF+SSD KPCD GEQVSSNC NG+D+ KDS QLS RLSYCSSQEPG+
Sbjct: 121 EVKSDAQEENMALDFHSSDHKPCDAGEQVSSNCFNGLDVVKDSSQLSTRLSYCSSQEPGE 180

Query: 181 STQVNALGFVDQFVTLSTTNVNLSQG---REAARVQSPLLSRIKGPQSLAKRIGRKSIEE 240
           STQVNA+ FVD FV LST NVN SQG   R+AARVQSP++SRIKGPQSLAKRIGRKSI+E
Sbjct: 181 STQVNAIVFVDHFVKLSTANVNPSQGLGQRKAARVQSPIVSRIKGPQSLAKRIGRKSIDE 240

Query: 241 TRNFEWVDIYNQEAECNLFAKCKKATSDFVNCRGQSCATKPQNIAKLSNKEGDCLLKKYE 300
           T NFEWV+I NQEAECN F KCKK++SD  NCRG+SC TK  N+AKLSN  GDCLLK+YE
Sbjct: 241 TGNFEWVEILNQEAECNSFCKCKKSSSDLSNCRGRSCTTKHHNMAKLSNI-GDCLLKRYE 300

Query: 301 GEE-ASAGIQFQIDPTASTLPHPRLDISSSEIDGMNNIEIENTFNKEPNAKIAEEQFGSM 360
            EE A+AGIQFQ D TASTLPHPRL+I S E +GM+NIEIEN  N+E NAK+ E QF  M
Sbjct: 301 DEEEANAGIQFQTDSTASTLPHPRLEIYSLETEGMSNIEIENKSNEETNAKLVEGQFEFM 360

Query: 361 DDEGDELEELDIGFSTQIAVEAMEALSYIPDSNKLANACSPENAFDNISCSIIEHKPHLN 420
           DDE D  +ELDIGFSTQIA EAMEAL YIPD++ LANA SPENA D++SCS+ EHKPHLN
Sbjct: 361 DDERDAPDELDIGFSTQIAAEAMEALCYIPDNDNLANAWSPENALDSVSCSMKEHKPHLN 420

Query: 421 NSYPQIMRGAVRKSKRALHSKKKLNAKCLTRSQAQYDRQELESDLTTKRQAKRSRLAVKG 480
           +SYPQ + GA  KSKR L SK+KLNAKCL  S+ + + QELE+ L  K +AK+    V  
Sbjct: 421 SSYPQTIGGADGKSKRTLKSKRKLNAKCLNTSRVECECQELEAVLIAKSKAKK----VGW 480

Query: 481 RLNYRKSPDGSNYSATSSNLLSDIGSCQLIQ---RGLTKGDQVTITSLMVGLWSHPRRRR 540
           R    +  +     A     L    + Q++    RGLT GDQ+T T LMV LWSHPR RR
Sbjct: 481 RCRDSQIIESLLMRAIIQPHLPIYLAKQVVANXVRGLTIGDQIT-TRLMVDLWSHPRGRR 540

Query: 541 TPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNSNRKNTSRSSCKFDIYHKTT 600
           TPRN QSHPN+S NQNNT LAV+GSC NSILMK G +GRNSNRK TSRS  KF++YH T+
Sbjct: 541 TPRNIQSHPNRSKNQNNTSLAVDGSCNNSILMKNGKVGRNSNRKCTSRSRSKFEVYHNTS 600

Query: 601 -PIMLPQSSSKELARLGVSESMPDLRWKDLRRRRTMALVRVCFSQHLDEVTLKQQKKVVL 660
             IMLPQSSSKELARLGVSESMPDL+WKDLRRRRTMALVRVCFSQHLD VTLKQQKKVVL
Sbjct: 601 RSIMLPQSSSKELARLGVSESMPDLKWKDLRRRRTMALVRVCFSQHLDVVTLKQQKKVVL 660

Query: 661 QLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLESCGQASCFIDEKNYIL 720
           QLGISIASSS DATHFVADKFVRTRNMLEAIALGKPVVT SWLESCGQASCFIDEKNYIL
Sbjct: 661 QLGISIASSSVDATHFVADKFVRTRNMLEAIALGKPVVTPSWLESCGQASCFIDEKNYIL 720

Query: 721 RDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEIITSLVKMSQGEPIERSQ 780
           RDTKKEKEIGF+LPVS+SRAT CPLLQG +V VT NI+P KEII SLVKMSQGE IERSQ
Sbjct: 721 RDTKKEKEIGFSLPVSLSRATLCPLLQGFKVLVTQNIRPGKEIIASLVKMSQGETIERSQ 780

Query: 781 IFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNGIVIQKLENKRHELFTY 837
           IFTGK +KFPD+LLILSCEEDYA+CV FL+KGA +YSSELLLNGIVIQKLENKRHELFT 
Sbjct: 781 IFTGKNEKFPDNLLILSCEEDYADCVHFLKKGAKVYSSELLLNGIVIQKLENKRHELFTD 837

[Close]

BLAST of CmaCh17G011360.1 vs. NCBI nr
Match: gi|778727769|ref|XP_011659316.1| (PREDICTED: uncharacterized protein LOC101204397 isoform X1 [Cucumis sativus])

HSP 1 Score: 1011.9 bits (2615), Expect = 6.5e-292
Identity = 535/684 (78.22%), Postives = 586/684 (85.67%), Query Frame = 1


Query: 158 MGKDSYQLSPRLSYCSSQEPGDSTQVNALGFVDQFVTLSTTNVNLSQG---REAARVQSP 217
           M KDS QLS RLSYCSSQEPG+STQV A+GFVD FV LSTTNVN SQG   R+AARVQSP
Sbjct: 1   MEKDSSQLSTRLSYCSSQEPGESTQVKAIGFVDHFVKLSTTNVNPSQGIGQRKAARVQSP 60

Query: 218 LLSRIKGPQSLAKRIGRKSIEETRNFEWVDIYNQEAECNLFAKCKKATSDFVNCRGQSCA 277
           +LSRIKGPQSLAKRIGRKSI+ET NFEWVDI NQEAECN F KCKKA+SD  NCRGQS  
Sbjct: 61  ILSRIKGPQSLAKRIGRKSIDETGNFEWVDINNQEAECNSFGKCKKASSDLSNCRGQSYT 120

Query: 278 TKPQNIAKLSNKEGDCLLKKYEG-EEASAGIQFQIDPTASTLPHPRLDISSSEIDGMNNI 337
           TKP N+AKLSN   DCLLK+YE  EEASAGI+FQ D TAST PHPRLDI S E DGM++I
Sbjct: 121 TKPHNMAKLSNIR-DCLLKRYEDKEEASAGIKFQTDSTASTFPHPRLDIYSLETDGMSSI 180

Query: 338 EIENTFNKEPNAKIAEEQFGSMDDEGDELEELDIGFSTQIAVEAMEALSYIPDSNKLANA 397
           EIEN  N++ NAK+ E Q   MDDE D  +ELDIGFSTQIA EAMEAL YIPD++ LANA
Sbjct: 181 EIENRSNEKTNAKLVEGQLEFMDDERDAPDELDIGFSTQIAAEAMEALCYIPDNDTLANA 240

Query: 398 CSPENAFDNISCSIIEHKPHLNNSYPQIMRGAVRKSKRALHSKKKLNAKCLTRSQAQYDR 457
           CS ENA D++SCS+IEHKPHLN+SYPQ + GA  KSKR L SK+KLNAK L  S+ Q + 
Sbjct: 241 CSSENALDSVSCSMIEHKPHLNSSYPQTIGGADGKSKRTLKSKRKLNAKYLNTSKVQCEC 300

Query: 458 QELESDLTTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSDIGSCQLIQRGLTKGD 517
           QEL++ L TK +AKRS LA++G+ NYRKSPD SNY+AT SNLLS+ GSCQL QRGLT GD
Sbjct: 301 QELQAVLITKSKAKRSWLALQGQSNYRKSPDESNYTATPSNLLSETGSCQLSQRGLTVGD 360

Query: 518 QVTITSLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNS 577
           QV+ T LMVGL SHPR RRTPRN QSHPN+S NQNNT LAV+GSC NSILMK G +GRNS
Sbjct: 361 QVS-TRLMVGLCSHPRGRRTPRNIQSHPNRSKNQNNTSLAVDGSCNNSILMKNGKVGRNS 420

Query: 578 NRKNTSRSSCKFDIYHKTTP-IMLPQSSSKELARLGVSESMPDLRWKDLRRRRTMALVRV 637
           NRKNTSRS  KF +YH T+  IMLPQSSSKELARLGVSESMPDL+WKDLRRRRTMALVRV
Sbjct: 421 NRKNTSRSRSKFKVYHNTSRRIMLPQSSSKELARLGVSESMPDLKWKDLRRRRTMALVRV 480

Query: 638 CFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHS 697
           CFSQHLDEVTLKQQK+VVLQLGISIASSS DATHFVADKFVRTRNMLEAIALGKPVVTHS
Sbjct: 481 CFSQHLDEVTLKQQKRVVLQLGISIASSSVDATHFVADKFVRTRNMLEAIALGKPVVTHS 540

Query: 698 WLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSK 757
           WLESCGQASCFIDEK YILRDTKKEKEIGF+LPVS+SRATQCPLLQG +V VT NI+P K
Sbjct: 541 WLESCGQASCFIDEKKYILRDTKKEKEIGFSLPVSLSRATQCPLLQGFKVLVTQNIRPGK 600

Query: 758 EIITSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELL 817
           EII SLVKMSQGEPIE SQIFTGK +KFP++LLILSCEEDYA+CV FL+KGA +YSSELL
Sbjct: 601 EIIASLVKMSQGEPIEMSQIFTGKNEKFPNNLLILSCEEDYADCVHFLKKGAKVYSSELL 660

Query: 818 LNGIVIQKLENKRHELFTYCTKGF 837
           LNGIVIQKLENKRHELFT  TK F
Sbjct: 661 LNGIVIQKLENKRHELFTDSTKRF 682

[Close]

BLAST of CmaCh17G011360.1 vs. NCBI nr
Match: gi|778727772|ref|XP_011659317.1| (PREDICTED: uncharacterized protein LOC101204397 isoform X2 [Cucumis sativus])

HSP 1 Score: 891.3 bits (2302), Expect = 1.3e-255
Identity = 475/611 (77.74%), Postives = 520/611 (85.11%), Query Frame = 1


Query: 158 MGKDSYQLSPRLSYCSSQEPGDSTQVNALGFVDQFVTLSTTNVNLSQG---REAARVQSP 217
           M KDS QLS RLSYCSSQEPG+STQV A+GFVD FV LSTTNVN SQG   R+AARVQSP
Sbjct: 1   MEKDSSQLSTRLSYCSSQEPGESTQVKAIGFVDHFVKLSTTNVNPSQGIGQRKAARVQSP 60

Query: 218 LLSRIKGPQSLAKRIGRKSIEETRNFEWVDIYNQEAECNLFAKCKKATSDFVNCRGQSCA 277
           +LSRIKGPQSLAKRIGRKSI+ET NFEWVDI NQEAECN F KCKKA+SD  NCRGQS  
Sbjct: 61  ILSRIKGPQSLAKRIGRKSIDETGNFEWVDINNQEAECNSFGKCKKASSDLSNCRGQSYT 120

Query: 278 TKPQNIAKLSNKEGDCLLKKYEG-EEASAGIQFQIDPTASTLPHPRLDISSSEIDGMNNI 337
           TKP N+AKLSN   DCLLK+YE  EEASAGI+FQ D TAST PHPRLDI S E DGM++I
Sbjct: 121 TKPHNMAKLSNIR-DCLLKRYEDKEEASAGIKFQTDSTASTFPHPRLDIYSLETDGMSSI 180

Query: 338 EIENTFNKEPNAKIAEEQFGSMDDEGDELEELDIGFSTQIAVEAMEALSYIPDSNKLANA 397
           EIEN  N++ NAK+ E Q   MDDE D  +ELDIGFSTQIA EAMEAL YIPD++ LANA
Sbjct: 181 EIENRSNEKTNAKLVEGQLEFMDDERDAPDELDIGFSTQIAAEAMEALCYIPDNDTLANA 240

Query: 398 CSPENAFDNISCSIIEHKPHLNNSYPQIMRGAVRKSKRALHSKKKLNAKCLTRSQAQYDR 457
           CS ENA D++SCS+IEHKPHLN+SYPQ + GA  KSKR L SK+KLNAK L  S+ Q + 
Sbjct: 241 CSSENALDSVSCSMIEHKPHLNSSYPQTIGGADGKSKRTLKSKRKLNAKYLNTSKVQCEC 300

Query: 458 QELESDLTTKRQAKRSRLAVKGRLNYRKSPDGSNYSATSSNLLSDIGSCQLIQRGLTKGD 517
           QEL++ L TK +AKRS LA++G+ NYRKSPD SNY+AT SNLLS+ GSCQL QRGLT GD
Sbjct: 301 QELQAVLITKSKAKRSWLALQGQSNYRKSPDESNYTATPSNLLSETGSCQLSQRGLTVGD 360

Query: 518 QVTITSLMVGLWSHPRRRRTPRNFQSHPNKSNNQNNTFLAVEGSCENSILMKTGTLGRNS 577
           QV+ T LMVGL SHPR RRTPRN QSHPN+S NQNNT LAV+GSC NSILMK G +GRNS
Sbjct: 361 QVS-TRLMVGLCSHPRGRRTPRNIQSHPNRSKNQNNTSLAVDGSCNNSILMKNGKVGRNS 420

Query: 578 NRKNTSRSSCKFDIYHKTT-PIMLPQSSSKELARLGVSESMPDLRWKDLRRRRTMALVRV 637
           NRKNTSRS  KF +YH T+  IMLPQSSSKELARLGVSESMPDL+WKDLRRRRTMALVRV
Sbjct: 421 NRKNTSRSRSKFKVYHNTSRRIMLPQSSSKELARLGVSESMPDLKWKDLRRRRTMALVRV 480

Query: 638 CFSQHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHS 697
           CFSQHLDEVTLKQQK+VVLQLGISIASSS DATHFVADKFVRTRNMLEAIALGKPVVTHS
Sbjct: 481 CFSQHLDEVTLKQQKRVVLQLGISIASSSVDATHFVADKFVRTRNMLEAIALGKPVVTHS 540

Query: 698 WLESCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSK 757
           WLESCGQASCFIDEK YILRDTKKEKEIGF+LPVS+SRATQCPLLQG +V VT NI+P K
Sbjct: 541 WLESCGQASCFIDEKKYILRDTKKEKEIGFSLPVSLSRATQCPLLQGFKVLVTQNIRPGK 600

Query: 758 EIITSLVKMSQ 764
           EII SLVKMSQ
Sbjct: 601 EIIASLVKMSQ 609

[Close]

BLAST of CmaCh17G011360.1 vs. NCBI nr
Match: gi|720089086|ref|XP_010244657.1| (PREDICTED: uncharacterized protein LOC104588427 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 345.1 bits (884), Expect = 3.4e-91
Identity = 175/254 (68.90%), Postives = 203/254 (79.92%), Query Frame = 1


Query: 577  NTSRSSCKFDIYHKTTPIMLPQSS-SKELARLGVSESMPDLRWKDLRRRRTMALVRVCFS 636
            N +   C  D YHK +   L +S   KEL RL  SE++P   WKD+RRRR ++ +RV FS
Sbjct: 948  NAASPVCMGDEYHKQSCKNLSKSFLMKELVRLDASEAVPTPVWKDMRRRRDLSSIRVLFS 1007

Query: 637  QHLDEVTLKQQKKVVLQLGISIASSSADATHFVADKFVRTRNMLEAIALGKPVVTHSWLE 696
             HLDE  +KQQKK++ +LGISIAS S+DATHFVADKFVRTRNMLEAIALGKPVVTH WLE
Sbjct: 1008 HHLDEDIIKQQKKILTRLGISIASCSSDATHFVADKFVRTRNMLEAIALGKPVVTHLWLE 1067

Query: 697  SCGQASCFIDEKNYILRDTKKEKEIGFNLPVSISRATQCPLLQGLRVFVTPNIKPSKEII 756
            SCGQASCFIDEKNYILRD+KKEKEIGF++PVS++RA Q P+LQG RVFVTPNIKPSKE++
Sbjct: 1068 SCGQASCFIDEKNYILRDSKKEKEIGFSMPVSLARACQHPILQGKRVFVTPNIKPSKEVV 1127

Query: 757  TSLVKMSQGEPIERSQIFTGKADKFPDDLLILSCEEDYANCVPFLRKGATIYSSELLLNG 816
             SLV+  QG+ +ER      K DK PDDLL+LSCEEDYA CVP L KGA IYSSEL+LNG
Sbjct: 1128 ASLVRAVQGQAVERIGRSVVKDDKIPDDLLVLSCEEDYAVCVPILEKGAAIYSSELVLNG 1187

Query: 817  IVIQKLENKRHELF 830
            IVIQKLE +RH LF
Sbjct: 1188 IVIQKLEYERHRLF 1201

The following BLAST results are available for this feature:

BLAST of CmaCh17G011360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PAXI1_BOVIN	1.1e-25	31.09	PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1	[more]
PAXI1_HUMAN	3.2e-25	31.09	PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2	[more]
PAXI1_MOUSE	9.4e-25	28.99	PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1	[more]
MDC1_PIG	3.3e-22	31.35	Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa GN=MDC1 PE=3 SV=1	[more]
MDC1_MACMU	4.4e-22	30.68	Mediator of DNA damage checkpoint protein 1 OS=Macaca mulatta GN=MDC1 PE=3 SV=1	[more]

BLAST of CmaCh17G011360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7G0_CUCSA	0.0e+00	76.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390130 PE=4 SV=1	[more]
B9S3X8_RICCO	2.3e-86	57.19	Pax transcription activation domain interacting protein, putative OS=Ricinus com...	[more]
A0A067JPU6_JATCU	1.1e-85	54.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22020 PE=4 SV=1	[more]
B9I9Y2_POPTR	2.4e-83	69.17	BRCT domain-containing family protein OS=Populus trichocarpa GN=POPTR_0014s13050...	[more]
A0A067HH66_CITSI	5.3e-83	49.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002032mg PE=4 SV=1	[more]

BLAST of CmaCh17G011360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03130.1	4.9e-72	47.11	BRCT domain-containing DNA repair protein	[more]
AT3G21480.1	1.6e-67	46.41	BRCT domain-containing DNA repair protein	[more]

BLAST of CmaCh17G011360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189601\|gb\|KGN44834.1\|	0.0e+00	76.68	hypothetical protein Csa_7G390130 [Cucumis sativus]	[more]
gi\|659101097\|ref\|XP_008451424.1\|	0.0e+00	74.08	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103492723 [Cucumis me...	[more]
gi\|778727769\|ref\|XP_011659316.1\|	6.5e-292	78.22	PREDICTED: uncharacterized protein LOC101204397 isoform X1 [Cucumis sativus]	[more]
gi\|778727772\|ref\|XP_011659317.1\|	1.3e-255	77.74	PREDICTED: uncharacterized protein LOC101204397 isoform X2 [Cucumis sativus]	[more]
gi\|720089086\|ref\|XP_010244657.1\|	3.4e-91	68.90	PREDICTED: uncharacterized protein LOC104588427 isoform X1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001357	BRCT_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G011360	CmaCh17G011360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G011360.1	CmaCh17G011360.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G011360.1.exon.9	CmaCh17G011360.1.exon.9	exon
CmaCh17G011360.1.exon.8	CmaCh17G011360.1.exon.8	exon
CmaCh17G011360.1.exon.7	CmaCh17G011360.1.exon.7	exon
CmaCh17G011360.1.exon.6	CmaCh17G011360.1.exon.6	exon
CmaCh17G011360.1.exon.5	CmaCh17G011360.1.exon.5	exon
CmaCh17G011360.1.exon.4	CmaCh17G011360.1.exon.4	exon
CmaCh17G011360.1.exon.3	CmaCh17G011360.1.exon.3	exon
CmaCh17G011360.1.exon.2	CmaCh17G011360.1.exon.2	exon
CmaCh17G011360.1.exon.1	CmaCh17G011360.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G011360.1.CDS.1	CmaCh17G011360.1.CDS.1	CDS
CmaCh17G011360.1.CDS.2	CmaCh17G011360.1.CDS.2	CDS
CmaCh17G011360.1.CDS.3	CmaCh17G011360.1.CDS.3	CDS
CmaCh17G011360.1.CDS.4	CmaCh17G011360.1.CDS.4	CDS
CmaCh17G011360.1.CDS.5	CmaCh17G011360.1.CDS.5	CDS
CmaCh17G011360.1.CDS.6	CmaCh17G011360.1.CDS.6	CDS
CmaCh17G011360.1.CDS.7	CmaCh17G011360.1.CDS.7	CDS
CmaCh17G011360.1.CDS.8	CmaCh17G011360.1.CDS.8	CDS
CmaCh17G011360.1.CDS.9	CmaCh17G011360.1.CDS.9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G011360.1.three_prime_UTR.1	CmaCh17G011360.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	GENE3D	G3DSA:3.40.50.10190		coord: 634..712 score: 1.4
IPR001357	BRCT domain	PFAM	PF16770	RTT107_BRCT_5	coord: 628..711 score: 1.
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 624..701 score: 2.
IPR001357	BRCT domain	PROFILE	PS50172	BRCT	coord: 622..711 score: 12
IPR001357	BRCT domain	unknown	SSF52113	BRCT domain	coord: 630..726 score: 1.89
None	No IPR available	PANTHER	PTHR23196	PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN	coord: 607..829 score: 2.6E