CmaCh17G010630.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh17G010630.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr17 : 7614029 .. 7617773 (+)
Sequence length474
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGGTCCTGCACAGGGTATGTATTTCAACATGTTATAATTCTTTGTTCTTCATATCCTTTTCTTTTTCTAATTTTGTTCTCTGAAATTTTGTTGGATTTAAGGTTGACAATTTTATTTTTGAATTTGCAGGAAAAATCTAGCTTGAAATTTCCTTGGTCCAAAACTTGTTATAAAGAAGATGCTGTCAGTGGAATTCAGAGCACTAAAGGCTCCAGTCCTTTTGATTTCTCTCAAGGAAATGTGCTTCTAGTCCTAGGTGAAAAGTCGAGGCTTTTTCCTAAGGATGATCCTGGCGGCCCCATGTAGGTTGGCGTAGGCTACTACTCCTTTGGTTGATAGGTTTTACAAGGTTGGGATGACTTGCATTGGCAGGTTAGGGAGGAGGTTGAGAAACTAGGACAAGAGCTTTACAAGAAAACATGTGAGCCTTTAATAATGACCGAGACTCCTCCAATAGGGAATTGCTGGCACCTCTTGAAACTGGATGAGTAAGATAAAGGAATGCTCTGATATTAAAAAAGTTCTTGTGTTTGTTCTTTATGGGTCTTATTTGATCGGTTGAACATGTGATCTGATGTTTGAATTTCATACTGCAGAATCTGGAAAGTGAAGATCTACTCCATCTATTCTTTACAGTGATCTTTTTGGGTTGTCGTTCTTTTATTTGATATTGAAAAATGCGTTTAACATGATTGATTGGAATTTTCTTGATGATATTTTGAGTTCGGTTTTAGGATCAAATGAAGAGAATGGATTTGTTAGTCCATTCAAGAAAAAACATCTCGTTTGGCTGTCAAGGAGATCAAAACTGAGTTCATTGACACATTCTATCAAACATTACTGTTATTTTTTCTTTTTCTTTTACAGGATGGGTCGATTTCTCGAGTCCTTATTATATTCTTTCGAGTCTACCAAATGCAAAGATAGGAGATGGAAGTCTTCAACCTTAGAGAAGGTAACATGTTTATCAAGTACTGTTCTGAGTAATAATTTTGAGGCCTATAGTAACATTGTTTATCAAGTATTGTAATGAAGGATGATCTCGAGGCCTAGTTATAGTACATTGTTTTGGTAGTTCCATTTCCAAGAAATATTCAATTTTTTTCTGCCTCAAAAGGTACATTACTTGTGTATTTTATGTCATGGATAATCTGCAACTTACGTTTAGCAGTATTTTTATGTTAATTATCATTTTTATCGGTGATAATACTTTTTGCAAGCACTTCATATCCTAAACCCCAGCCTATTTATTGTGGCTTATTATTTTGAATCACATGAAAATTCATTTCAGAATGGTGGGGTCAAATGTGTCCACAAGGTTATTAGACAACATTGAGACACTAGTGCGACCTCTTATGCTATGCACTCCCCCAAGAAAAAGCTTGTCTGCTCGATGCCATACAAACGTTGCATCTGTAACATCGCAACGTTGTATCGATTTCCTTGAAGAAAGGATATTTTTTTTCTACTGGATTTTATACGGTGAAAATTTAAATTCGATGAGTGATTATTTTTGTGTATGTATTCATTATTTTGGTGCTTCAAAATAAGAATAGCAATGACGCTTTTTTAGAGATACTTGTATCGTGAGAGAGGAGCTCAGTGGATAAGAGGTAACTCAAAGCTCTATCCATTCTTAATCTCAGTCTCGAGAAGAAGATTAGATGTATAGTCCCAAGTTTGAACTAAACCAATAAAAATTTTAAGAAAGATTTGCTTCAGACTCCGAAAGGAAAATCATTTAGATCGTGTTAACTCCCTCTAGTTTATTGGAGACTTTTAATTCCGAAGAGGTTAGAAAGTTGCCATGTGGTTTGGGGATAGAGAAAGCTTCTGGCTTTTTCTTTGGACCAGTTTTATGTATTATTCTTTACTTGGCTCGTACACATTTGCAGCATCAATTGTGAATATCAATGGGAGAAATCTTTGCTTTCCTTTGAATCTCCATCTTAATCTTTTGTTGTTTCTCCTGAAACAAAGCTTTACTATGAGCCAACCTCTGTGGATGATCATGAACGGTCGACTTTTCGTTTGAAATACTGATAAACAAACTATTTATGTACGTATAATGGATTAAACAGGTATGAAATTGACGAAAATTGATGATTAATTTAGTCCTTATTATAATTGATTAGCGTAGGAATATGTTACTAGTTATTCAATTTGCTTGACATTGATTATAATGTCTAAATCATCCAAATGGTTGGTTGGCAATAATAAAGGTACTACATATCATAATGAGAAGATTGAAATATGTTTCCGAACAGCCCCACAAATGACTTCCTTCATTCATTGATTGAATCAATATGCACTCTTTAATTGATTTGACTCATAGGTTCATTGCTTTAAGATCATAATCTTTGACTTGATGAGTATCACTTATTAGATTATTAAAATTCGTTCTTTTCGAGTATATTCATAGTGGTTGAACTTTAAATTTGTGTTTATTTGTTCTTTGAACTTTCAAAAGTATTTCGAAGAATTTCGATCTTTCAATATTTTATTATTATGTATTTTACACTTTCAAATTTTTGATATATTTGAAATTTTTAAGAATTAATTTATATCTTTTAGATATAAATTTACTTACTTTGTGTTAAATGAAATTTTAAATTNNNNNNNNTTTTTTGGTTTAAATATTGAATAAGTATTTAACAGATATTGTCTGTTTTAACTCGTTACGTATCGTCGTTAACCAAACAGGTACATCCATCCCTCTTGGAAGCCAGAGTCCTCGCTGGCACACCGCTCCAAAACATGTCTGTTAGGGAGCTATTTTCGCACCAACCGATATAGGATCTCACAATCCACCCCTCTTGAGAGCCAGAGTCCTCGCTGGCACACCGCTCCAAAACATGTTTGTTAGGGAGATGTTTTCGCACCAACTGATATAGGATCTCACAATCCACCCCTCTTGGGGAGCTAGAGTCTTTGGCACACCGCTCCAAAATATGTTTATTAAGGAGATGTTTTTGCACGCTTTGGCCCACTACGTACTTATGTTGACTAAAAGCAAAAAGGTCAAAAGTCCACAAAAAGGTCAAAGATGGTGTGGAATTGATAGAAAAAGAGTGTGGTCCACCAAGTGCTCAACTTTGCAAGTTCAATGTATGAAGACCAACTTTTGTTATTTTCTTTTGAAGGATTATTGCATTAAATCACCAAAATTATAAAAAAAATTAATATATAATGTCTTCATTTTGGTATCTTAATCTTATTTTATTCCTTTGTGTTTGAATCTATGTCCTCAATTAATCAAATTTCTAATTACATTTATTTAAATAAAAATTAGTGCTTTTGTTTTATTTAAATAATTCAAGATCTTGGACACATGGCATAATTATTTTATATTTAATCACTCTATTGCATCTAAATGATTAAATAAAAAGATTTTAATTGATTATTCTAATCAAACGGATTAAAATAATTTGTTTTAATATATTTTAAAATGGGATAAAAAAAAATACACACTTTTACCTTTAATTAAAATTATTATTAGTTTTTTCTACACGTGTGAAGCACCCATTTTTATGCCCAATAGAGAGGAAAAGGAACCAATATCATACGTTCTCGGTGAGGCACCGCACGTGCGAATGTCCGTATCTTCTTTTGGTCCGTGAAGGCCACTCGCCTTCCTTTCCCTCTTTTCTTTTTTTTGCCGTTCAGTTCCCTCTGAGCTCTGAGCATTTCTCCATTAACTCTCTGCTTCTTCTTCTTCTTCTTCACATGGAAGCTTAG

mRNA sequence

ATGGAGTTGGTCCTGCACAGGGAAAAATCTAGCTTGAAATTTCCTTGGTCCAAAACTTGTTATAAAGAAGATGCTGTCAGTGGAATTCAGAGCACTAAAGGCTCCAGTCCTTTTGATTTCTCTCAAGGAAATGTGCTTCTAGTCCTAGGTTGGGATGACTTGCATTGGCAGGTTAGGGAGGAGGTTGAGAAACTAGGACAAGAGCTTTACAAGAAAACATGTGAGCCTTTAATAATGACCGAGACTCCTCCAATAGGGAATTGCTGGCACCTCTTGAAACTGGATGAGATGGGTCGATTTCTCGAGTCCTTATTATATTCTTTCGAGTCTACCAAATGCAAAGATAGGAGATGGAAGTCTTCAACCTTAGAGAAGAATGGTGGGGTCAAATGTGTCCACAAGTTCCCTCTGAGCTCTGAGCATTTCTCCATTAACTCTCTGCTTCTTCTTCTTCTTCTTCACATGGAAGCTTAG

Coding sequence (CDS)

ATGGAGTTGGTCCTGCACAGGGAAAAATCTAGCTTGAAATTTCCTTGGTCCAAAACTTGTTATAAAGAAGATGCTGTCAGTGGAATTCAGAGCACTAAAGGCTCCAGTCCTTTTGATTTCTCTCAAGGAAATGTGCTTCTAGTCCTAGGTTGGGATGACTTGCATTGGCAGGTTAGGGAGGAGGTTGAGAAACTAGGACAAGAGCTTTACAAGAAAACATGTGAGCCTTTAATAATGACCGAGACTCCTCCAATAGGGAATTGCTGGCACCTCTTGAAACTGGATGAGATGGGTCGATTTCTCGAGTCCTTATTATATTCTTTCGAGTCTACCAAATGCAAAGATAGGAGATGGAAGTCTTCAACCTTAGAGAAGAATGGTGGGGTCAAATGTGTCCACAAGTTCCCTCTGAGCTCTGAGCATTTCTCCATTAACTCTCTGCTTCTTCTTCTTCTTCTTCACATGGAAGCTTAG

Protein sequence

MELVLHREKSSLKFPWSKTCYKEDAVSGIQSTKGSSPFDFSQGNVLLVLGWDDLHWQVREEVEKLGQELYKKTCEPLIMTETPPIGNCWHLLKLDEMGRFLESLLYSFESTKCKDRRWKSSTLEKNGGVKCVHKFPLSSEHFSINSLLLLLLLHMEA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh17G010630CmaCh17G010630gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh17G010630.1CmaCh17G010630.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G010630.1.exon.6CmaCh17G010630.1.exon.6exon
CmaCh17G010630.1.exon.5CmaCh17G010630.1.exon.5exon
CmaCh17G010630.1.exon.4CmaCh17G010630.1.exon.4exon
CmaCh17G010630.1.exon.3CmaCh17G010630.1.exon.3exon
CmaCh17G010630.1.exon.2CmaCh17G010630.1.exon.2exon
CmaCh17G010630.1.exon.1CmaCh17G010630.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G010630.1.CDS.1CmaCh17G010630.1.CDS.1CDS
CmaCh17G010630.1.CDS.2CmaCh17G010630.1.CDS.2CDS
CmaCh17G010630.1.CDS.3CmaCh17G010630.1.CDS.3CDS
CmaCh17G010630.1.CDS.4CmaCh17G010630.1.CDS.4CDS
CmaCh17G010630.1.CDS.5CmaCh17G010630.1.CDS.5CDS
CmaCh17G010630.1.CDS.6CmaCh17G010630.1.CDS.6CDS