CmaCh17G004260.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G004260.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MACPF domain-containing CAD1-like protein
Location	Cma_Chr17 : 2515221 .. 2519324 (-)
Sequence length	959

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTTTGCTCCGTCCTCCAAAACCCTTCCTTCAGAATTCGAGACCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGTCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCCACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCCTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTATGATTCCAGATCAATTTCCATGTCATGGTTAATCGATCATAATCTCTGGTAGTTTTGAACGATTTCTCGATCTCTTTTTTCTGGGTTTTTCTTTGCATCTGGTAAAATGGCGGTTTAGAAGCTTGAAATTTAGGGGAATGTTTGTTTTGGGGAAGTTTGGTTTTGCTAATTTAGTGTGAGTTCGTTCGTTCTCTATGTTTCGACGAGTTTCTCATTGGCAGTGTATTTGAGACTGTTTTGCTGTGGGTTTTCTACTCTCTCTTGAAGGTTTTGAAGACTCCCGAGTTCCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGTAAGTGCATTTTGATTCTCCTTTGTGGCTTTTGTTCGTTTAATGGAACATTTTTGCATGTTCATATTGTTTGAAATGCGAGTATCTTGGGAGCTTGTTTCAAACTAACGTGGAAGAGAATAAAGGGGGTGTAAAATCACCTAAACTTAGACAATTAGAACACTCACTTTTTTGGGCCAAACCTTTCTTTTATTTTTTTCACTCTAAGCAAAAGAACATAAATGTTGTACACTCACCAAAGGATCCCTTGTAAATTCTCATGGTTAGCCTTAGGGAGGGGAACACTCATTTGTTTATGTCTCGACAATTGCTTGATGCCAGAATCATCCACCCATGTGCTATATATCTTTCTCCGAAGTCTCCACATGTTTCGTGGATAATTGGAATTCAGTTCTCCTCCCACAACTGCAAGTAACTGTACACTACTCCAAGGACTACTTCCAAGCGGTGCCCCATTCATGCTCACCATTTGTCATGTAGGTGTGAAGATTGCTAGATGTGTCACTTGTCTTGCAATCTTGTTCTTGCTTGGTCCACACATGCCACTTGTCTCATGTCTTTAGGTTTATGGTGTTTGTGGCTATCTTTTGGTCTACTTCATCTTCCTTTTGTTAGCTATATAAGAATCCACCTTTTTTTTCAAAATTGCACAACATCCTTTGAGGTTGGTTGATTGAGCTTCACTCCATTGAGGTTCTTTTCGTGGATGGTGGATGAGAACCAACTACTTTGGTGTCATCCATTGCTTGTAAAGGGCACCTTTTACACACACCTTCGTTGTTTTGTGCGAACCAACCTGCCTCAATGTGTGCACATGTCATCGTGCAAGTACAAGTGATCTACCCATTCCATGCACCTGTCCTCCGCATGTCTCTTGTATGTGCAGCCTCCATATGACTCCCTTGCCTTGAGGTTACGCATATGCTGCTTACAAGTGTTGGTGCCTTTGTCCATTGGTGATCTCCCATGCATTACTCCATCATGCTGTCGCTTCTATGCATGAGCCCCCCTTTGGTGTGAAGGGCTTAAGAAGAAGTGTATGCCCTTGGACTCTCTACTTTCTCATGCTCCATCCATTGGTCTTATGCCGATGTGCTATTGTGCCAATGTTGATATTCAACCTCTCATATTGTGTGTTAATCTTTGTTTGTCTTGCCTTGTCTCTTTATTCTATTGGCTATAGTTCTCTATCTCTTTCCTCTGTCAAATCTCAAGCACCACGCTACTTTGAAATGAAGCATGGATTCTTTTATGGCTAAGAAAAGGGAGATGGAGGAGATCATAGGATAGTCACAAACTCTAGAAACCTAAATGCATGGGACAACTGGCATGTGTGGACCAAGCAAGAACAAAATGTATGACAAGTGATACATACCTAGAAATAGGTACAGATACGATAAAGGGTGAGCATGGATGGGACACCCTTGTATGGATGATACTTTGCAAGCCGAATCTAGTCCTTGGATTTGTGGACAGTTACCTGTAGTTTTTGGAGGAGAGTAACTGAATTTCCTTTATGGATGAAACATACGGAGGCTTGGGAGAAAGATAGCGTGCGGGGGATAAATTTTTCATTAAGAAATTTTCCCACAAGGGAGTTCCTTCCTCTTCCCTATAAAAGACGGAATGTACAAGGGGTCCTTTGGTGCGTGTGCAACTTTTATATTATTTTGCTTGCGAATTTTACTGTTCTAAATTCTTAACGGTCTAAGTTGAGGGTGATCTTACACCCACTTTTTTCTCTTCCTCTTTAGTCTTTGTGGATGGTAGGTTGACTAAGATAGAGCCTTAACTAATGATTAATATGCCTGTATGTCCTAAAATCTGCCTACTAATGTTGATAAATTTCTCTGCCCCCAAACACACTTTGGCCTCTGGGTTTAGTTGAACAACTGGTTCTCCCAAAACAAATTCAAATTCAAATTCGTGGATTGAGCATCAGATTGCTTTGACACAATGAAAAAGAATTGCAAAATAATCTTGAGAACCCAAACACATTCAACAATGAAAATTTCCAGGCCAGCCCTATTGATTCCGTTTGTTTTCTCTTCAATTTGCTGGAATTACTTAACTCATCCAACCAAACTGTTCAACCCCTCTAGCAATTATTTTGTCCCTCCTCTTACCCAACATTTAGCTTTAGCTCTTGGCTTTCGAGCTAAGCCCTTGCCCTACTCCAGTTCTATCTCCTTCGACTTGTTTCCTGCAGAAGTTAGATGATTCCGTGATGTTTCTAGCTTGGTAATTTGCAAAGAAAATATTGCCTCAATCATCACCCGCAGTTTAGCATGAAAATCAAGGAAACAACGACATTTAGAAATTCCATGCGAGATCCCACATCGATTGGAGAGAGGAACGAGTGCCAGTAAGGACGTTAGGCCCCAAAGGGAGGTGGATTGTGAGATCCCACATCGACTGGAGAGGGAAACAAAGTATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACCTTGAGGGGAAAGAAGCCCAAAGAGGACAATATTGGCTTGCGATGGGAAAGCGTGAGAATACATGGTAGAATTCATGCTCAAATTTTCTTGATTGACCCCTAAAATCTGCTTCCATCTTTTCTGTTGGCTTTCAGTCTTTCTGCTGCCACCTCTATCAAATCAAATCCCAAATTTGGGAAGAAATTTCTTCACATGGGATTATACAGAAGGGGACAACTATTTTTGAATTGGCTGGACCCACATGCCTTCATGCATGACTCAAACTATTAATTTTTGGTTGACACATGAAATTACCACAAGACCAATAAATGTGGAATTCTCAATCTGAGTTAATTCAATGACTGTAATTAACTTTCAAGGAAATGTGTCTGAACACCTGAAACTTGCAGGAATAAAGCTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAATCTCTTTACATCGAGAAGACTAGCAACGTGCTCGATGGTCAGTCCATATCAGTTGATAATCAAGATCAACGATCCCGGGAACAATACCATGATGGTAAACAGGGGGGCAAGTCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGGAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGTTGGGGAAATCTTCTTTGTTATCTTGAGTTTAGAAGAGCATTCAATTGATGAAATAGCTTCCTTCTATTTCTAGTGCGACTATACAATGTAGAAGCTTTGAAGTATAAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTCATTGCTTGCAGATTTTATCCCAATTAGCAGATATTGTCCGCTTTGGTCAATTACGAATTGTCGTCAG

mRNA sequence

CTGTTTGCTCCGTCCTCCAAAACCCTTCCTTCAGAATTCGAGACCGAGAAATTGTAGGTTATGGAGGAAATCAAAGCGTCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCCACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCCTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTCCCGAGTTCCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAATCTCTTTACATCGAGAAGACTAGCAACGTGCTCGATGGTCAGTCCATATCAGTTGATAATCAAGATCAACGATCCCGGGAACAATACCATGATGGTAAACAGGGGGGCAAGTCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGGAAAAAAATCCCATTGTTTCATCAGAGTCATGATCTGGAACACTTAGAAAAGTAGTATGTTGGGGAAATCTTCTTTGTTATCTTGAGTTTAGAAGAGCATTCAATTGATGAAATAGCTTCCTTCTATTTCTAGTGCGACTATACAATGTAGAAGCTTTGAAGTATAAAGATATTAACACGAGCTTCCTTTATCTAATACCTCTGATGATGGGGTTTCTGTTGAGACAATTCCTGAGATTTGTAAATTTTCATTGCTTGCAGATTTTATCCCAATTAGCAGATATTGTCCGCTTTGGTCAATTACGAATTGTCGTCAG

Coding sequence (CDS)

ATGGAGGAAATCAAAGCGTCACAGTCCGCGCCACTTCCTCCAAGCACAGCTCCATCTCAACCCACTCCGCCATTGCCTCCTCTTCCTCCCAAGCCCAAGAAGAGGCCACTCGACAGAAATGCCTATATCCAATATACAAAGATGCGTGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTCCCGAGTTCCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAATCTCTTTACATCGAGAAGACTAGCAACGTGCTCGATGGTCAGTCCATATCAGTTGATAATCAAGATCAACGATCCCGGGAACAATACCATGATGGTAAACAGGGGGGCAAGTCATCTACAAAATCTTATGAAAGTAACCACCCTTCAAGTCACGCCCCCGAAAAACAGGGAGCAAATGATGGCCAGACATCTGGAACCTATATTGTTGGCGGATCGGCATTTGGCTGGAACTTCATCGCCTTCACAGGTACCGAACCGGTATATTATGGAGTTACAAAGGAAGAATTTCGGGAAAAAAATCCCATTGTTTCATCAGAGTCATGA

Protein sequence

MEEIKASQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES

Homology

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BLAST of CmaCh17G004260.1 vs. TrEMBL
Match: A0A0A0K7F0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003420 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 152/205 (74.15%), Postives = 167/205 (81.46%), Query Frame = 1


Query: 1   MEEIKASQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEE KA+        TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFL
Sbjct: 1   MEETKAT--------TAPSQT---LPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFL 60

Query: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTS-NVLDGQSISVDNQD 120
           EV+KTP+FRNCKAA EIRERIK+LQD+Y +MMA TSE+LYIEKTS NVLDG +       
Sbjct: 61  EVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLA------- 120

Query: 121 QRSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFT 180
              REQ+HDG  G KSSTKSYESN+PSS+APEKQ ANDGQ SG+Y+VGGSAFGWNFIAFT
Sbjct: 121 ---REQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFT 180

Query: 181 GTEPVYYGVTKEEFREKNPIVSSES 205
           GTEPVYYG+TKE FREKNPI SSES
Sbjct: 181 GTEPVYYGITKEVFREKNPIDSSES 184

[Close]

BLAST of CmaCh17G004260.1 vs. TrEMBL
Match: F6I612_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02890 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38
Identity = 105/208 (50.48%), Postives = 135/208 (64.90%), Query Frame = 1


Query: 1   MEEIKASQSAPLPPSTAPSQ--PTPPLPP--LPPKPKKRPLDRNAYIQ---YTKMRAVIR 60
           MEE   +Q+ P PP  AP    P PP PP  LP K KKR LD N  IQ   Y K RAV++
Sbjct: 1   MEEPNPAQTNPTPPPNAPQNLPPPPPQPPTSLPQKTKKRSLDSNVSIQNSKYFKTRAVVK 60

Query: 61  DLRPHFLEVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSI 120
           DLRPHF+EVL++P+FRNCKAANEIRE++K+L D+Y  M   T+E++ I K  NV + Q  
Sbjct: 61  DLRPHFIEVLRSPDFRNCKAANEIREQLKVLMDLYKQM---TAETVSIGKCKNVPEAQPT 120

Query: 121 SVDNQD-QRSREQYHDGKQGGKS------STKSYESNHPSSHAPEKQGANDGQTSGTYIV 180
             +N+D Q+  E++ D KQ  +S      +  S +   P+++  EKQ   DG   GTY+V
Sbjct: 121 LSENKDGQKPHERHQDVKQAEQSVPDCAFAKPSEDMPFPTANLSEKQRPEDGWAQGTYVV 180

Query: 181 GGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           GGSAFGWNFI F G++P YYGVTKE FR
Sbjct: 181 GGSAFGWNFITFPGSKPAYYGVTKETFR 205

[Close]

BLAST of CmaCh17G004260.1 vs. TrEMBL
Match: M5X0P7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011834mg PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34
Identity = 96/191 (50.26%), Postives = 125/191 (65.45%), Query Frame = 1


Query: 7   SQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQ---YTKMRAVIRDLRPHFLEVL 66
           +Q A  P S     P PP P LPPK KKRPLD +A+I    Y K+RAV++++RPHFLEVL
Sbjct: 12  TQIANPPNSEEALAPQPPPPSLPPKTKKRPLDNDAHISNSSYFKVRAVLKEIRPHFLEVL 71

Query: 67  KTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRSR 126
           +TP+FR CKAAN+I+E++KLL ++Y  M   T+E++   +  NV +GQ +S         
Sbjct: 72  RTPDFRLCKAANDIQEQVKLLMELYKQM---TAEAVSTARCKNVPEGQPLS--------S 131

Query: 127 EQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEP 186
           E+  D +  GK S    E+  PS  + EK  A DGQ  GTY+VGGSAFGWNFI F G+EP
Sbjct: 132 EKSQDTRASGKPS----ENKFPSGISSEK--AEDGQIQGTYVVGGSAFGWNFITFLGSEP 185

Query: 187 VYYGVTKEEFR 195
           VY G+TKE FR
Sbjct: 192 VYCGITKESFR 185

[Close]

BLAST of CmaCh17G004260.1 vs. TrEMBL
Match: C6SYV1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G231900 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.1e-34
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 23  PPLPPLPPKPKKRPL-DRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCKAANEIRERI 82
           PP PP PP  KKRPL D NA+  Y K+RAVIRDLRPHFLEVL+TP+++NCKA++EI+E++
Sbjct: 10  PPPPPAPPTTKKRPLEDSNAHSNYFKIRAVIRDLRPHFLEVLRTPDYKNCKASHEIQEQL 69

Query: 83  KLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRS--REQYHDGKQG--GKSST 142
           K++  +Y  M A   ++  + K+ NV DGQ  +  N DQ++   +Q   GKQ    KS  
Sbjct: 70  KIVVKLYENMKA---DAASLAKSKNVQDGQMKAGQNMDQKTLKEQQPQHGKQSQVEKSFA 129

Query: 143 KSYESN-HPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           +  E    P +   +KQ   + QT GTY+VGGSAFGWNFI F+G EPVYYG TKE+FR
Sbjct: 130 RPSEIKLTPPAPGFQKQLVEETQTQGTYVVGGSAFGWNFITFSGKEPVYYGRTKEQFR 184

[Close]

BLAST of CmaCh17G004260.1 vs. TrEMBL
Match: A0A0B2NVT9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028840 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.1e-34
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 23  PPLPPLPPKPKKRPL-DRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCKAANEIRERI 82
           PP PP PP  KKRPL D NA+  Y K+RAVIRDLRPHFLEVL+TP+++NCKA++EI+E++
Sbjct: 10  PPPPPAPPTTKKRPLEDSNAHSNYFKIRAVIRDLRPHFLEVLRTPDYKNCKASHEIQEQL 69

Query: 83  KLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRS--REQYHDGKQG--GKSST 142
           K++  +Y  M A   ++  + K+ NV DGQ  +  N DQ++   +Q   GKQ    KS  
Sbjct: 70  KIVVKLYENMKA---DAASLAKSKNVQDGQMKAGQNMDQKTLKEQQPQHGKQSQVEKSFA 129

Query: 143 KSYESN-HPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           +  E    P +   +KQ   + QT GTY+VGGSAFGWNFI F+G EPVYYG TKE+FR
Sbjct: 130 RPSEIKLTPPAPGFQKQLVEETQTQGTYVVGGSAFGWNFITFSGKEPVYYGRTKEQFR 184

[Close]

BLAST of CmaCh17G004260.1 vs. TAIR10
Match: AT1G01730.1 (AT1G01730.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 77/206 (37.38%), Postives = 111/206 (53.88%), Query Frame = 1


Query: 8   QSAPLPPSTAPSQPTPPLPPLPPKP----KKRPLDRNAYIQ---YTKMRAVIRDLRPHFL 67
           +SA LP    P+Q T P   +   P    +KR L+ N  I+   Y KMR +++DLRPH L
Sbjct: 36  RSAELPSPAQPAQMTAPPSTVTTDPSSRGRKRALEANLQIESSNYYKMRLLVKDLRPHVL 95

Query: 68  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQ 127
           EVL+TP+ RN KA  EI+E++KL+  +Y  M+    ES   EKT+               
Sbjct: 96  EVLRTPDLRNSKAVIEIQEKMKLMLQLYEEMIG---ESPKREKTAK-------------- 155

Query: 128 RSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAF-- 187
                  D    GK++T +  +      +  ++ ++DG   G  +VGGSAFGWNFI    
Sbjct: 156 ------SDSLSNGKATTTTTTTTSVLRSSETEKHSSDGD--GDKVVGGSAFGWNFITSGG 215

Query: 188 TGTEPVYYGVTKEEFREKNPIVSSES 205
            GTEPVY G++KEE+R  +PI+  E+
Sbjct: 216 PGTEPVYSGMSKEEYRSSHPIMQVEA 216

[Close]

BLAST of CmaCh17G004260.1 vs. NCBI nr
Match: gi|659116786|ref|XP_008458259.1| (PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-73
Identity = 154/204 (75.49%), Postives = 171/204 (83.82%), Query Frame = 1


Query: 1   MEEIKASQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEE KA+    +PP+TAPSQ    LPPLPPK KKRPLDRNAY+Q+TKMRAVIRDLRPHFL
Sbjct: 1   MEETKAA----VPPTTAPSQT---LPPLPPKLKKRPLDRNAYVQFTKMRAVIRDLRPHFL 60

Query: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQ 120
           EV+KTP+FRNCKAA EIRERIK+LQDMY  MM+ TSE+LYIEKT NVLDG          
Sbjct: 61  EVMKTPDFRNCKAATEIRERIKVLQDMYASMMSATSETLYIEKTCNVLDG---------- 120

Query: 121 RSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTG 180
            +REQ+HDGK G KSSTKSYESN+PSS+APEKQ ANDG  SG+Y+VGGSAFGWNFIAFTG
Sbjct: 121 LAREQHHDGKLGDKSSTKSYESNNPSSYAPEKQRANDGPISGSYVVGGSAFGWNFIAFTG 180

Query: 181 TEPVYYGVTKEEFREKNPIVSSES 205
           TEPVYYG+TKE FREKNPI SSES
Sbjct: 181 TEPVYYGITKEVFREKNPIDSSES 187

[Close]

BLAST of CmaCh17G004260.1 vs. NCBI nr
Match: gi|449441476|ref|XP_004138508.1| (PREDICTED: uncharacterized protein LOC101203384 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70
Identity = 152/205 (74.15%), Postives = 167/205 (81.46%), Query Frame = 1


Query: 1   MEEIKASQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFL 60
           MEE KA+        TAPSQ    LPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFL
Sbjct: 1   MEETKAT--------TAPSQT---LPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFL 60

Query: 61  EVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTS-NVLDGQSISVDNQD 120
           EV+KTP+FRNCKAA EIRERIK+LQD+Y +MMA TSE+LYIEKTS NVLDG +       
Sbjct: 61  EVIKTPDFRNCKAATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLA------- 120

Query: 121 QRSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFT 180
              REQ+HDG  G KSSTKSYESN+PSS+APEKQ ANDGQ SG+Y+VGGSAFGWNFIAFT
Sbjct: 121 ---REQHHDGNLGDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFT 180

Query: 181 GTEPVYYGVTKEEFREKNPIVSSES 205
           GTEPVYYG+TKE FREKNPI SSES
Sbjct: 181 GTEPVYYGITKEVFREKNPIDSSES 184

[Close]

BLAST of CmaCh17G004260.1 vs. NCBI nr
Match: gi|225454190|ref|XP_002272636.1| (PREDICTED: uncharacterized protein LOC100244723 [Vitis vinifera])

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 105/208 (50.48%), Postives = 135/208 (64.90%), Query Frame = 1


Query: 1   MEEIKASQSAPLPPSTAPSQ--PTPPLPP--LPPKPKKRPLDRNAYIQ---YTKMRAVIR 60
           MEE   +Q+ P PP  AP    P PP PP  LP K KKR LD N  IQ   Y K RAV++
Sbjct: 1   MEEPNPAQTNPTPPPNAPQNLPPPPPQPPTSLPQKTKKRSLDSNVSIQNSKYFKTRAVVK 60

Query: 61  DLRPHFLEVLKTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSI 120
           DLRPHF+EVL++P+FRNCKAANEIRE++K+L D+Y  M   T+E++ I K  NV + Q  
Sbjct: 61  DLRPHFIEVLRSPDFRNCKAANEIREQLKVLMDLYKQM---TAETVSIGKCKNVPEAQPT 120

Query: 121 SVDNQD-QRSREQYHDGKQGGKS------STKSYESNHPSSHAPEKQGANDGQTSGTYIV 180
             +N+D Q+  E++ D KQ  +S      +  S +   P+++  EKQ   DG   GTY+V
Sbjct: 121 LSENKDGQKPHERHQDVKQAEQSVPDCAFAKPSEDMPFPTANLSEKQRPEDGWAQGTYVV 180

Query: 181 GGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           GGSAFGWNFI F G++P YYGVTKE FR
Sbjct: 181 GGSAFGWNFITFPGSKPAYYGVTKETFR 205

[Close]

BLAST of CmaCh17G004260.1 vs. NCBI nr
Match: gi|596007165|ref|XP_007218458.1| (hypothetical protein PRUPE_ppa011834mg [Prunus persica])

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-34
Identity = 96/191 (50.26%), Postives = 125/191 (65.45%), Query Frame = 1


Query: 7   SQSAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQ---YTKMRAVIRDLRPHFLEVL 66
           +Q A  P S     P PP P LPPK KKRPLD +A+I    Y K+RAV++++RPHFLEVL
Sbjct: 12  TQIANPPNSEEALAPQPPPPSLPPKTKKRPLDNDAHISNSSYFKVRAVLKEIRPHFLEVL 71

Query: 67  KTPEFRNCKAANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRSR 126
           +TP+FR CKAAN+I+E++KLL ++Y  M   T+E++   +  NV +GQ +S         
Sbjct: 72  RTPDFRLCKAANDIQEQVKLLMELYKQM---TAEAVSTARCKNVPEGQPLS--------S 131

Query: 127 EQYHDGKQGGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEP 186
           E+  D +  GK S    E+  PS  + EK  A DGQ  GTY+VGGSAFGWNFI F G+EP
Sbjct: 132 EKSQDTRASGKPS----ENKFPSGISSEK--AEDGQIQGTYVVGGSAFGWNFITFLGSEP 185

Query: 187 VYYGVTKEEFR 195
           VY G+TKE FR
Sbjct: 192 VYCGITKESFR 185

[Close]

BLAST of CmaCh17G004260.1 vs. NCBI nr
Match: gi|351734448|ref|NP_001236776.1| (uncharacterized protein LOC100306306 [Glycine max])

HSP 1 Score: 152.1 bits (383), Expect = 1.0e-33
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 23  PPLPPLPPKPKKRPL-DRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCKAANEIRERI 82
           PP PP PP  KKRPL D NA+  Y K+RAVIRDLRPHFLEVL+TP+++NCKA++EI+E++
Sbjct: 10  PPPPPAPPTTKKRPLEDSNAHSNYFKIRAVIRDLRPHFLEVLRTPDYKNCKASHEIQEQL 69

Query: 83  KLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQDQRS--REQYHDGKQG--GKSST 142
           K++  +Y  M A   ++  + K+ NV DGQ  +  N DQ++   +Q   GKQ    KS  
Sbjct: 70  KIVVKLYENMKA---DAASLAKSKNVQDGQMKAGQNMDQKTLKEQQPQHGKQSQVEKSFA 129

Query: 143 KSYESN-HPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFR 195
           +  E    P +   +KQ   + QT GTY+VGGSAFGWNFI F+G EPVYYG TKE+FR
Sbjct: 130 RPSEIKLTPPAPGFQKQLVEETQTQGTYVVGGSAFGWNFITFSGKEPVYYGRTKEQFR 184

The following BLAST results are available for this feature:

BLAST of CmaCh17G004260.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G004260.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7F0_CUCSA	1.2e-70	74.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003420 PE=4 SV=1	[more]
F6I612_VITVI	2.1e-38	50.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02890 PE=4 SV=...	[more]
M5X0P7_PRUPE	2.4e-34	50.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011834mg PE=4 SV=1	[more]
C6SYV1_SOYBN	7.1e-34	51.69	Uncharacterized protein OS=Glycine max GN=GLYMA_18G231900 PE=2 SV=1	[more]
A0A0B2NVT9_GLYSO	7.1e-34	51.69	Uncharacterized protein OS=Glycine soja GN=glysoja_028840 PE=4 SV=1	[more]

BLAST of CmaCh17G004260.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01730.1	1.1e-20	37.38	unknown protein	[more]

BLAST of CmaCh17G004260.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116786\|ref\|XP_008458259.1\|	1.7e-73	75.49	PREDICTED: uncharacterized protein LOC103497729 [Cucumis melo]	[more]
gi\|449441476\|ref\|XP_004138508.1\|	1.8e-70	74.15	PREDICTED: uncharacterized protein LOC101203384 [Cucumis sativus]	[more]
gi\|225454190\|ref\|XP_002272636.1\|	3.1e-38	50.48	PREDICTED: uncharacterized protein LOC100244723 [Vitis vinifera]	[more]
gi\|596007165\|ref\|XP_007218458.1\|	3.5e-34	50.26	hypothetical protein PRUPE_ppa011834mg [Prunus persica]	[more]
gi\|351734448\|ref\|NP_001236776.1\|	1.0e-33	51.69	uncharacterized protein LOC100306306 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G004260	CmaCh17G004260	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004260.1	CmaCh17G004260.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004260.1.three_prime_UTR.1	CmaCh17G004260.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004260.1.CDS.3	CmaCh17G004260.1.CDS.3	CDS
CmaCh17G004260.1.CDS.2	CmaCh17G004260.1.CDS.2	CDS
CmaCh17G004260.1.CDS.1	CmaCh17G004260.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004260.1.five_prime_UTR.1	CmaCh17G004260.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004260.1.exon.3	CmaCh17G004260.1.exon.3	exon
CmaCh17G004260.1.exon.2	CmaCh17G004260.1.exon.2	exon
CmaCh17G004260.1.exon.1	CmaCh17G004260.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35459	FAMILY NOT NAMED	coord: 11..200 score: 1.0
None	No IPR available	PANTHER	PTHR35459:SF2	SUBFAMILY NOT NAMED	coord: 11..200 score: 1.0