CmaCh16G012360.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G012360.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chalcone-flavanone isomerase family protein
Location	Cma_Chr16 : 9359839 .. 9361170 (-)
Sequence length	1190

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCTTCCACCGCCCTCTCAGAGATTACAATGGAGACTCCGTCGTCGATCAGGCGCTTAACTCGATCCCAAACTCTCGCTGCTACAAACTCCGTCAACAACAGTGAGCCTCGTTTCTACGTTCTTTGAAACCCCGTTCTTGAAGAAACTAAAAGATTGATTCAATCGAGTTTAAATTGATGGGTTATGGTAAATTTAATCTTTGATTTTCTAACGTGAATGCGTTCTTTTGGTCGTGTTTTTAGGGACGGTTGAGGATTGTGACAATAATGGCTTATGGAAATCCCAGGAGCGGAGTCGAAATTCGCAAGATTTGGCCGGGGCGAAAGGGAAAGATCGATCGGCACTTATTGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGAGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGTGGGACTTCTCGACCCGATCCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAGATCTTTTCGATATCACAAACGATAATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAAAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACATCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTGTCGCCGTCGCTGTCTCAAGATGACGGCGTCTCTTCTCTGTGGTCGATTCAAGTGAACGCAAGCAGCCACGGCGAAGACGTGGATAAAGAAGAGCTGATCGAACCCGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTTTGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACGGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAAGTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCAAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATGTGAGAGCGAATAGTTAAAAAAACAAGATTCGATTGAAATATGTAATGTTGTCTTTCTTTGACAACGGCTGTTTTTTAGTGTTGTTTTTCTTTGCCTTTTGCTTTGTTTGTTGCTATGATAATTACTATATTTTACGAGATGTCAAATATATCATCACGATTGTCTCGTAGTAAA

mRNA sequence

AATTCTTCCACCGCCCTCTCAGAGATTACAATGGAGACTCCGTCGTCGATCAGGCGCTTAACTCGATCCCAAACTCTCGCTGCTACAAACTCCGTCAACAACAGGACGGTTGAGGATTGTGACAATAATGGCTTATGGAAATCCCAGGAGCGGAGTCGAAATTCGCAAGATTTGGCCGGGGCGAAAGGGAAAGATCGATCGGCACTTATTGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGAGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGTGGGACTTCTCGACCCGATCCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAGATCTTTTCGATATCACAAACGATAATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAAAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACATCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTGTCGCCGTCGCTGTCTCAAGATGACGGCGTCTCTTCTCTGTGGTCGATTCAAGTGAACGCAAGCAGCCACGGCGAAGACGTGGATAAAGAAGAGCTGATCGAACCCGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTTTGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACGGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAAGTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCAAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATGTGAGAGCGAATAGTTAAAAAAACAAGATTCGATTGAAATATGTAATGTTGTCTTTCTTTGACAACGGCTGTTTTTTAGTGTTGTTTTTCTTTGCCTTTTGCTTTGTTTGTTGCTATGATAATTACTATATTTTACGAGATGTCAAATATATCATCACGATTGTCTCGTAGTAAA

Coding sequence (CDS)

ATGGAGACTCCGTCGTCGATCAGGCGCTTAACTCGATCCCAAACTCTCGCTGCTACAAACTCCGTCAACAACAGGACGGTTGAGGATTGTGACAATAATGGCTTATGGAAATCCCAGGAGCGGAGTCGAAATTCGCAAGATTTGGCCGGGGCGAAAGGGAAAGATCGATCGGCACTTATTGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGAGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGTGGGACTTCTCGACCCGATCCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAGATCTTTTCGATATCACAAACGATAATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAAAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACATCATCAGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTGTCGCCGTCGCTGTCTCAAGATGACGGCGTCTCTTCTCTGTGGTCGATTCAAGTGAACGCAAGCAGCCACGGCGAAGACGTGGATAAAGAAGAGCTGATCGAACCCGAGGAAGAGGAAGAAGACAACGAAGACGGGTTGGTAGACGAGCTTTGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACGGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAAGTGATTGAGGAAGTTAGTGACGAGAGCCATGACGAGGTGTCACCAAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATGTGAGAGCGAATAG

Protein sequence

METPSSIRRLTRSQTLAATNSVNNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEISKLSLDSWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDGVSSLWSIQVNASSHGEDVDKEELIEPEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHDEVSPSVLRLKGVPTPKGKHLRFQCESE

Homology

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BLAST of CmaCh16G012360.1 vs. TrEMBL
Match: A0A0A0L4Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002810 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.8e-111
Identity = 251/371 (67.65%), Postives = 281/371 (75.74%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN------RTVEDCDNNGLWKSQERSRNSQDLAGAKGK 60
           METPSSIRR+TRSQTL+A  S+NN      R VE+CDNNGL KS++R+R SQDL G KG+
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKV 120
           DRSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQKV
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQKV 120

Query: 121 EEEAEISKLSLDS-------WPVGLLDPIPANTLQILNTSRDGDLFDITN---------- 180
           EEEAEISKLSL+S        P GLL P PANT QI N ++D ++  ITN          
Sbjct: 121 EEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTIS 180

Query: 181 DNPVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKL---SSLS 240
              VDVDLFN K+QEENQI RSLLLDF+EKSE  D++ TSSDCSSVL    K    S+LS
Sbjct: 181 QVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHHGKFSISSTLS 240

Query: 241 PSLSQDDGVSSLWSIQVNASSHGEDVD------KEELIEPEEEEED----NEDGLVDELC 300
            S SQDD   SLWSIQVNASSHGE+ D      +EE+IE EE+EE     N+ GLVDELC
Sbjct: 241 LSPSQDDDNFSLWSIQVNASSHGEEEDDEDIEEEEEVIEDEEDEEGDDYINDGGLVDELC 300

Query: 301 WGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESH--DEVSPSVLRLKGVPTPK 333
            G+SKISVNEKG+A+ F GKHTRFVYDSEDE+IEEVSDES     VSPS+LRLKG+PTPK
Sbjct: 301 KGISKISVNEKGEAEEFVGKHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTPK 360

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BLAST of CmaCh16G012360.1 vs. TrEMBL
Match: E5RDD2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.8e-111
Identity = 254/374 (67.91%), Postives = 283/374 (75.67%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN------RTVEDCDNNGLWKSQERSRNSQDLAGAKGK 60
           METPSSIRR+TRSQTL+A NSVNN      R VE+CDNNGL KS++R+R SQDL G KG+
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQK 120
           D RSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQK
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLDSWP-------VGLLDPIPANTLQILNTSRDGDLFDITNDN------- 180
           VEEEAEISKLSL+S P        GLL P PANT QI N S+D +L  IT+         
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQTI 180

Query: 181 ---PVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLS---SL 240
               VD+DLFN KKQEENQI RSLLLDF+EKSE  D++ TSSDCSSVL  Q+K S   +L
Sbjct: 181 SQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSSTL 240

Query: 241 SPSLSQDDGVSSLWSIQVNASSHGEDVDKEELIEPEEEE--EDNED--------GLVDEL 300
           S S SQDD  SSLWSIQVNASSH ED + E++ E EEE+  ED ED        GLVDEL
Sbjct: 241 SLSPSQDDDNSSLWSIQVNASSHDEDEEDEDIEEEEEEDVIEDEEDEEGADYDGGLVDEL 300

Query: 301 CWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESH----DEVSPSVLRLKGVP 333
           C G+SKISVNEKG+A+ F GKHTRFVY+SEDE+IEEVSDES       VSPS+LRLKG+P
Sbjct: 301 CKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRGGGGGGVSPSILRLKGMP 360

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BLAST of CmaCh16G012360.1 vs. TrEMBL
Match: U5GBT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11620g PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.6e-70
Identity = 194/387 (50.13%), Postives = 241/387 (62.27%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN----RTVEDCDNNGLWKSQERSRNSQDLAGAKGKDR 60
           METPSS +R+TRSQT+AA N+ NN    R +ED  + G+ KS+ R+   Q       +DR
Sbjct: 65  METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 124

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 125 SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 184

Query: 121 VEEEAEISKLSLD-----------SWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVD 180
           VEEEAE+SKLSL+           + P+GLL P PANT Q+ N S  GD   + +  P+ 
Sbjct: 185 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLS--GDDIVLASVTPLP 244

Query: 181 V------------DLFNAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           V            ++FN KKQE    +  +TRSL+LDF+EKSE  D   SS CSS L  Q
Sbjct: 245 VIEEKLKICQEVSEIFNVKKQESLESQKSLTRSLMLDFSEKSESSD---SSKCSSALTCQ 304

Query: 241 ----EKLSSLSPSLSQ--DDGVSSLWSIQVNASSHGEDVD---------------KEELI 300
               E ++S S   S   DD  +S+WSIQVNAS+H ED +               ++E  
Sbjct: 305 GDNCEVITSESKDKSSLADDDNASIWSIQVNASTHDEDEEEVIEEEEEEEEHYYYRDEYE 364

Query: 301 EPEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHD 333
           E EEEEE +  GL+DELC G+S+ISV EK  AK F GKHTRFVY+S+DE++EEV D   D
Sbjct: 365 EAEEEEEADVGGLLDELCEGISQISVKEKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDD 424

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BLAST of CmaCh16G012360.1 vs. TrEMBL
Match: W9SCR5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026683 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.7e-67
Identity = 189/360 (52.50%), Postives = 227/360 (63.06%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSALI 60
           METPSS  R+TRSQTL     +NN         GL  S++R    Q       +DRSALI
Sbjct: 1   METPSSTIRVTRSQTLTG---LNNNIPFSNSEKGLSNSRQRRAKPQ-------QDRSALI 60

Query: 61  DITNDSPIVSLAAGN-LTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
           DITNDSPIV LA G  L TP SS  KQRS R K  TPGSGEALLRGQVKTLLQKVEEEAE
Sbjct: 61  DITNDSPIVGLATGGALETPSSSMAKQRSSRAKK-TPGSGEALLRGQVKTLLQKVEEEAE 120

Query: 121 ISKLSLDSWP-----------VGLLDPIPANTLQILNTSRDGDLFDITNDNP---VDVDL 180
           +SK+SLDS P            GLL P PANT Q+LN S   +   ++++ P   V+  L
Sbjct: 121 LSKISLDSRPFLRVKGVANSPAGLLAPTPANTPQVLNPSGGNENNGLSSEAPSPLVEEQL 180

Query: 181 FNAKKQEENQ--------ITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS 240
            +    EE +        ITRSLLLDF+EKS+  D   SS+CSSVL + ++ S+      
Sbjct: 181 ISQVIDEEEESLELQKSIITRSLLLDFSEKSDSCD---SSECSSVLTKSKEKST------ 240

Query: 241 QDDGVSSLWSIQVNASSHGEDVDKEELIEPEEE----------EEDNEDGLVDELCWGLS 300
            DD  SS+WS+QVNAS+ GE+ D+EE IE EE+          EE+  D +VDELC  LS
Sbjct: 241 PDDDNSSVWSVQVNASTLGEE-DEEEEIEDEEDYYVEEEGDEVEEEGNDEMVDELCQFLS 300

Query: 301 KISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHDEVSPSVLRLKGVPTPKGKHLRF 328
           KIS+NEK   K F GKHTRFVY+S+DE+IEE     ++  SPSVLRL G+PTPKGKHLRF
Sbjct: 301 KISMNEKPLPK-FEGKHTRFVYNSDDEIIEE----ENEACSPSVLRLNGLPTPKGKHLRF 334

[Close]

BLAST of CmaCh16G012360.1 vs. TrEMBL
Match: M5WFK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007215mg PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.0e-66
Identity = 188/384 (48.96%), Postives = 228/384 (59.38%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSALI 60
           METPSSIRR+TRSQ L A NS  N       N    K + +SR      G + +DRSALI
Sbjct: 1   METPSSIRRVTRSQALVAQNSNTNNIPLSRKNEDSEKVESKSRPRN---GKQQQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIV LA G+L TP S+  KQRSFR K  TPGSGEALLRGQVKTLLQ+VEEEAE+
Sbjct: 61  DITNDSPIVGLAMGSLETPSSAIVKQRSFRAKN-TPGSGEALLRGQVKTLLQQVEEEAEL 120

Query: 121 SKLSLDS------------WPVGLLDPIPANTLQILNTSRDGD--------------LFD 180
           SK++L+S             P+GLL P PANT Q+ + S D                L  
Sbjct: 121 SKITLESRPLRLLQGITGNSPMGLLAPTPANTPQVSDLSVDASGSNNGGVGFEKPSPLIQ 180

Query: 181 ITNDNPVDVDLFNAKKQE--ENQ---ITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKL 240
               + V  D+F  K QE  E+Q   I+RSLLLDF+EKSE+     SS+CSSV+   ++ 
Sbjct: 181 EQLISQVVCDIFEGKNQESLESQKSIISRSLLLDFSEKSEV--SSVSSECSSVITEIKEK 240

Query: 241 SSLSPSLSQDDGVSSLWSIQVNASSHGEDVDKEELIEPEEEEEDNEDGL----------- 300
           S      S DD  +S+WSIQVNAS+H ED ++    E EEEEE+ E+             
Sbjct: 241 S------SPDDDSASIWSIQVNASTHDEDEEEVAQAEEEEEEEEEEEDYYLNLNEGYEIE 300

Query: 301 ---------VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDE---VIEEVSDESHDE 328
                    +DELC G++ I V+EK     F GKHTRFVYDSED+   V E+ S ES D 
Sbjct: 301 EHEQDGGYDLDELCDGINNICVDEKKMIPKFAGKHTRFVYDSEDDIEIVEEDFSAESPDS 360

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BLAST of CmaCh16G012360.1 vs. TAIR10
Match: AT5G66230.1 (AT5G66230.1 Chalcone-flavanone isomerase family protein)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-58
Identity = 169/364 (46.43%), Postives = 212/364 (58.24%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSV-NNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSAL 60
           METPSS RR+TRSQT  A N++ +++  +D  +    KS +R+       GAK  DRSAL
Sbjct: 1   METPSSTRRVTRSQTRCAINNLLSSKKADDWSDKCQSKSVQRN-------GAK--DRSAL 60

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
            DITNDSPIV LA   + TP S    +R+      TPGSGEALLRGQVKTLLQKVEEEA+
Sbjct: 61  FDITNDSPIVGLA---MQTPSSGVVGKRNMSRINNTPGSGEALLRGQVKTLLQKVEEEAD 120

Query: 121 ISKLSLDS--------WPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVDVDLFNAKKQ 180
           ++K+SL+S         P+GLL P PANT Q+L  S   D   +   +PV    F A  Q
Sbjct: 121 LTKISLESRPFIHLVTSPMGLLAPTPANTPQVLGFS---DEVQVVITSPVVAGQFRAPSQ 180

Query: 181 ----------EEN-------QITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSP 240
                     EE+        ITRSLLLDF++KSE+ +   SSDCSSV+ +         
Sbjct: 181 VVESNMFDEKEESLELEKSPSITRSLLLDFSDKSELWE---SSDCSSVVTQ--------- 240

Query: 241 SLSQDDGVSSLWSIQVNASSHGEDVDKEELIE-----------PEEEEEDNEDGLVDELC 300
             + +D  SS+WS+Q NAS+  E+ D EE               +EEEE+ E G+VD LC
Sbjct: 241 --NPEDDNSSVWSMQANASAKDEEYDDEEEEAYSYGEEYDEEYYDEEEEEEEGGIVDGLC 300

Query: 301 WGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHDEVSPSVLRLKGVPTPKGK 328
            G+ K+SV       +F GKHTRFVYDSEDE I E  D+     SP VLRLKG PTP GK
Sbjct: 301 EGIRKMSVE-----TDFAGKHTRFVYDSEDEEIVEAKDQ-----SPGVLRLKGFPTPTGK 325

[Close]

BLAST of CmaCh16G012360.1 vs. TAIR10
Match: AT3G51230.1 (AT3G51230.1 BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1))

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 88/201 (43.78%), Postives = 111/201 (55.22%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSALI 60
           METPSS +R+TRSQ ++A N        D D    + S  ++ +S  +   K +DRSALI
Sbjct: 1   METPSSAKRVTRSQAISAIND------SDSDFKVPFSSSNKTEDSS-IDQRKEEDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIV L     T P     K++S R K+ TPGSGEALLRGQVKTLL KVEE  E+
Sbjct: 61  DITNDSPIVGLTMQ--TPPSGFMVKRKSSRIKI-TPGSGEALLRGQVKTLLHKVEEGTEL 120

Query: 121 SK-------LSLDSWPVGLLDPIPANTLQILNTSRDGDLFDITN----DNPVDVDLFNAK 180
                    + L + P+ LL P PANT Q  N S D     I +     N     +   K
Sbjct: 121 IHSIKTRPFIHLVTSPMRLLAPTPANTPQFPNFSDDDVKIKIASPIVAGNLRTSQISEEK 180

Query: 181 KQEENQITRSLLLDFAEKSEI 191
           + +   ITRSLL DF +KS +
Sbjct: 181 EDKSMSITRSLLFDFTDKSAL 191

[Close]

BLAST of CmaCh16G012360.1 vs. NCBI nr
Match: gi|449456805|ref|XP_004146139.1| (PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 2.6e-111
Identity = 251/371 (67.65%), Postives = 281/371 (75.74%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN------RTVEDCDNNGLWKSQERSRNSQDLAGAKGK 60
           METPSSIRR+TRSQTL+A  S+NN      R VE+CDNNGL KS++R+R SQDL G KG+
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKV 120
           DRSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQKV
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQKV 120

Query: 121 EEEAEISKLSLDS-------WPVGLLDPIPANTLQILNTSRDGDLFDITN---------- 180
           EEEAEISKLSL+S        P GLL P PANT QI N ++D ++  ITN          
Sbjct: 121 EEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTIS 180

Query: 181 DNPVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKL---SSLS 240
              VDVDLFN K+QEENQI RSLLLDF+EKSE  D++ TSSDCSSVL    K    S+LS
Sbjct: 181 QVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHHGKFSISSTLS 240

Query: 241 PSLSQDDGVSSLWSIQVNASSHGEDVD------KEELIEPEEEEED----NEDGLVDELC 300
            S SQDD   SLWSIQVNASSHGE+ D      +EE+IE EE+EE     N+ GLVDELC
Sbjct: 241 LSPSQDDDNFSLWSIQVNASSHGEEEDDEDIEEEEEVIEDEEDEEGDDYINDGGLVDELC 300

Query: 301 WGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESH--DEVSPSVLRLKGVPTPK 333
            G+SKISVNEKG+A+ F GKHTRFVYDSEDE+IEEVSDES     VSPS+LRLKG+PTPK
Sbjct: 301 KGISKISVNEKGEAEEFVGKHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTPK 360

[Close]

BLAST of CmaCh16G012360.1 vs. NCBI nr
Match: gi|659095386|ref|XP_008448552.1| (PREDICTED: YTH domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 2.6e-111
Identity = 254/374 (67.91%), Postives = 283/374 (75.67%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN------RTVEDCDNNGLWKSQERSRNSQDLAGAKGK 60
           METPSSIRR+TRSQTL+A NSVNN      R VE+CDNNGL KS++R+R SQDL G KG+
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQK 120
           D RSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQK
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLDSWP-------VGLLDPIPANTLQILNTSRDGDLFDITNDN------- 180
           VEEEAEISKLSL+S P        GLL P PANT QI N S+D +L  IT+         
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQTI 180

Query: 181 ---PVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKLS---SL 240
               VD+DLFN KKQEENQI RSLLLDF+EKSE  D++ TSSDCSSVL  Q+K S   +L
Sbjct: 181 SQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSSTL 240

Query: 241 SPSLSQDDGVSSLWSIQVNASSHGEDVDKEELIEPEEEE--EDNED--------GLVDEL 300
           S S SQDD  SSLWSIQVNASSH ED + E++ E EEE+  ED ED        GLVDEL
Sbjct: 241 SLSPSQDDDNSSLWSIQVNASSHDEDEEDEDIEEEEEEDVIEDEEDEEGADYDGGLVDEL 300

Query: 301 CWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESH----DEVSPSVLRLKGVP 333
           C G+SKISVNEKG+A+ F GKHTRFVY+SEDE+IEEVSDES       VSPS+LRLKG+P
Sbjct: 301 CKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRGGGGGGVSPSILRLKGMP 360

[Close]

BLAST of CmaCh16G012360.1 vs. NCBI nr
Match: gi|566170831|ref|XP_006383108.1| (hypothetical protein POPTR_0005s11620g [Populus trichocarpa])

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70
Identity = 194/387 (50.13%), Postives = 241/387 (62.27%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN----RTVEDCDNNGLWKSQERSRNSQDLAGAKGKDR 60
           METPSS +R+TRSQT+AA N+ NN    R +ED  + G+ KS+ R+   Q       +DR
Sbjct: 65  METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 124

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 125 SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 184

Query: 121 VEEEAEISKLSLD-----------SWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVD 180
           VEEEAE+SKLSL+           + P+GLL P PANT Q+ N S  GD   + +  P+ 
Sbjct: 185 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLS--GDDIVLASVTPLP 244

Query: 181 V------------DLFNAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           V            ++FN KKQE    +  +TRSL+LDF+EKSE  D   SS CSS L  Q
Sbjct: 245 VIEEKLKICQEVSEIFNVKKQESLESQKSLTRSLMLDFSEKSESSD---SSKCSSALTCQ 304

Query: 241 ----EKLSSLSPSLSQ--DDGVSSLWSIQVNASSHGEDVD---------------KEELI 300
               E ++S S   S   DD  +S+WSIQVNAS+H ED +               ++E  
Sbjct: 305 GDNCEVITSESKDKSSLADDDNASIWSIQVNASTHDEDEEEVIEEEEEEEEHYYYRDEYE 364

Query: 301 EPEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHD 333
           E EEEEE +  GL+DELC G+S+ISV EK  AK F GKHTRFVY+S+DE++EEV D   D
Sbjct: 365 EAEEEEEADVGGLLDELCEGISQISVKEKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDD 424

[Close]

BLAST of CmaCh16G012360.1 vs. NCBI nr
Match: gi|743899806|ref|XP_011043193.1| (PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica])

HSP 1 Score: 273.1 bits (697), Expect = 6.5e-70
Identity = 195/385 (50.65%), Postives = 243/385 (63.12%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN----RTVEDCDNNGLWKSQERSRNSQDLAGAKGKDR 60
           METPSS +R+TRSQT+AA N+ NN    R +ED  + G+ KS+ R+   Q       +DR
Sbjct: 1   METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 60

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 61  SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLD-----------SWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVD 180
           VEEEAE+SKLSL+           + P+GLL P PANT Q+ N S  GD   + +  P+ 
Sbjct: 121 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLS--GDDIVLASVTPLP 180

Query: 181 V------------DLFNAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           V            ++F+ KKQE    +  +TRSL+LDF+EKSE  D   SS+CSS L  Q
Sbjct: 181 VIEEKLKICQGVSEIFDVKKQESLESQKSLTRSLMLDFSEKSESYD---SSECSSALTYQ 240

Query: 241 ----EKLSSLSPSLSQ--DDGVSSLWSIQVNASSHGED----VDKEELI---------EP 300
               E ++S S   S   DD  +S+WSIQVNAS+H ED    +++EE           E 
Sbjct: 241 GDNCEVVTSESKDKSSMADDDNASIWSIQVNASTHDEDEEEVIEEEEEYYYYHDEYDEEA 300

Query: 301 EEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHDEV 333
           EEEEE +  GL+DELC G+S+ISV EK  AK F GKHTRFVY+S+DE++EEV D   DE 
Sbjct: 301 EEEEEADVGGLLDELCEGISQISVKEKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDDE- 360

[Close]

BLAST of CmaCh16G012360.1 vs. NCBI nr
Match: gi|743899804|ref|XP_011043192.1| (PREDICTED: myelin transcription factor 1 isoform X1 [Populus euphratica])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 194/380 (51.05%), Postives = 242/380 (63.68%), Query Frame = 1


Query: 1   METPSSIRRLTRSQTLAATNSVNN----RTVEDCDNNGLWKSQERSRNSQDLAGAKGKDR 60
           METPSS +R+TRSQT+AA N+ NN    R +ED  + G+ KS+ R+   Q       +DR
Sbjct: 1   METPSSTKRVTRSQTVAALNTNNNIPLSRKIEDSSDKGVTKSRRRNAKQQL------QDR 60

Query: 61  SALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMM---TPGSGEALLRGQVKTLLQK 120
           SALIDITNDSPIV +A G L TP S+  KQ++ R K     TPGSGEALLRGQVKTLLQK
Sbjct: 61  SALIDITNDSPIVGIAMGILETPSSALAKQKNSRAKNNIPNTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLD-----------SWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVD 180
           VEEEAE+SKLSL+           + P+GLL P PANT Q+ N S  GD   + +  P+ 
Sbjct: 121 VEEEAELSKLSLENRPFLHLQGFVNSPMGLLAPTPANTPQVPNLS--GDDIVLASVTPLP 180

Query: 181 V------------DLFNAKKQE----ENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQ 240
           V            ++F+ KKQE    +  +TRSL+LDF+EKSE  D   SS+CSS L  Q
Sbjct: 181 VIEEKLKICQGVSEIFDVKKQESLESQKSLTRSLMLDFSEKSESYD---SSECSSALTYQ 240

Query: 241 ----EKLSSLSPSLSQ--DDGVSSLWSIQVNASSHGED----VDKEELI---------EP 300
               E ++S S   S   DD  +S+WSIQVNAS+H ED    +++EE           E 
Sbjct: 241 GDNCEVVTSESKDKSSMADDDNASIWSIQVNASTHDEDEEEVIEEEEEYYYYHDEYDEEA 300

Query: 301 EEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVSDESHDEV 328
           EEEEE +  GL+DELC G+S+ISV EK  AK F GKHTRFVY+S+DE++EEV D   DE 
Sbjct: 301 EEEEEADVGGLLDELCEGISQISVKEKAMAK-FEGKHTRFVYNSDDEIVEEVVDCGDDE- 360

The following BLAST results are available for this feature:

BLAST of CmaCh16G012360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G012360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4Y0_CUCSA	1.8e-111	67.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002810 PE=4 SV=1	[more]
E5RDD2_CUCME	1.8e-111	67.91	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
U5GBT7_POPTR	2.6e-70	50.13	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11620g PE=4 SV=1	[more]
W9SCR5_9ROSA	4.7e-67	52.50	Uncharacterized protein OS=Morus notabilis GN=L484_026683 PE=4 SV=1	[more]
M5WFK5_PRUPE	3.0e-66	48.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007215mg PE=4 SV=1	[more]

BLAST of CmaCh16G012360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66230.1	3.5e-58	46.43	Chalcone-flavanone isomerase family protein	[more]
AT3G51230.1	1.5e-24	43.78	BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isome...	[more]

BLAST of CmaCh16G012360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456805\|ref\|XP_004146139.1\|	2.6e-111	67.65	PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus]	[more]
gi\|659095386\|ref\|XP_008448552.1\|	2.6e-111	67.91	PREDICTED: YTH domain-containing protein 1-like [Cucumis melo]	[more]
gi\|566170831\|ref\|XP_006383108.1\|	3.8e-70	50.13	hypothetical protein POPTR_0005s11620g [Populus trichocarpa]	[more]
gi\|743899806\|ref\|XP_011043193.1\|	6.5e-70	50.65	PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]	[more]
gi\|743899804\|ref\|XP_011043192.1\|	1.9e-69	51.05	PREDICTED: myelin transcription factor 1 isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G012360	CmaCh16G012360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G012360.1	CmaCh16G012360.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G012360.1.three_prime_UTR.1	CmaCh16G012360.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G012360.1.CDS.2	CmaCh16G012360.1.CDS.2	CDS
CmaCh16G012360.1.CDS.1	CmaCh16G012360.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G012360.1.five_prime_UTR.1	CmaCh16G012360.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G012360.1.exon.2	CmaCh16G012360.1.exon.2	exon
CmaCh16G012360.1.exon.1	CmaCh16G012360.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28039	FAMILY NOT NAMED	coord: 1..332 score: 1.2
None	No IPR available	PANTHER	PTHR28039:SF2	SUBFAMILY NOT NAMED	coord: 1..332 score: 1.2