CmaCh16G004050.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G004050.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NAC domain protein,
Location	Cma_Chr16 : 2011953 .. 2014074 (-)
Sequence length	1000

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACACGGCGGCAGCGGCGGCGGACACCAGAACTCCGACGGGTTCCTCCCACCGGGTTTCCGGTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAGAAGGTTCTGGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTCAACAAGTCCGAGCCCTGGGACCTCCCTGGTCAGCTCTCTCCACCCCTTTCTATATACATATTTGTTAGATGAACACGACCCTCCATATACTTGCATAAATTTTCTTCGGCTTTTCCAAAAAAATTTGTAAATTCACGGCAAAAAGTTATATATATATATATATATATTTCTTTTTTTATTTATTGAAAAATAATAATAATAATGTGTGGATTGAACAGAGAAAGCGCTGATGGGTGAAAAGGAGTGGTATTTCTTCAGCCTGCGAGACCGGAAATACCCGACCGGGTTGAGGACGAACCGGGCGACGGAGGCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCACCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGCCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGTTCTCTCTCTCTCCCTCTCTCTCTCAGTTGAAGAAGTCGCCGTCGACGTTGATAGCTTAATTAATTCATTATCTTTTAAATAAATGAACTCATATCAAACGTCAACACCCCCATCTCCATGTGTGTATATATATATATATATATATATATATATATATTTTAATTTCATGCTTGCATTAATGAACCAATTTTTTTTTCTTTTAATGATTAAAGAAAATCATGTATTTTAAGGTGTTATTTCAATTTCTATTTAGCAAAAAAAAACTAATAATAATAATAATAAATATATATTTTTGTGAAAATTAGAATAGGATTTCAGAAATTCTTTTTTAAAGATTAATTTTAATATGATATCTATTAAAATATATAAAAAAAATCATAATAAATTAAATAATATTTCATAAACTAAATCTATACTATATTTTTAAGCGCAATTTATTTAATATATAATATATTATTTTAAATTAAAGGCATGTGTTATCTTTATTTAAATAACTTCAAGATAATAATCAAATTTACAATATAGTTAAAATAATTGATGATATATATGCAGACAAAGACCCTTCGATTGAATTTAAAAAGAAAAAAATACCAGTAAATAATTTTCTAGCATTTATTTTTGGTACAAATAATATTCAATAGTAGGTAAAGCAATAATAAAATATTTATATTTAATATTATTTTTTAAAAATGAATATCTAAATATTTTATTATATATAGTACACATTATTTGGATGGAGGGCCAATTTCAATGAAGAGGTTTTAATGTTGGGAATAATAATTATAATGTCATAAATAAAATTTATGTTTCATGTCCCTTTCTATTTATTTTCCTCATATGTGTGGTGGGTTTTTATTCATTTATTTATTTTTATTTTATTTTATTTTATTTTATTTATTTATTTATTTATTTATTACATGCATGTAACAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAAGAAGATTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCGACTCGATTCCTCCGCCGACCCGAGTGAGAATGAGCTGCACGTGACCTGTTTCTCCACCAATAATGTCAACTACCCCGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAACCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGTGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGAAAATTCCCTTTTTATCTGTAATATCTGAAAAAGAATTAAGAACTTGACAAATGAAAACAGACTCCTTTTTTGTATTATTATTATTTTAGTATAACTTCGAAATGCC

mRNA sequence

ATGGAACACGGCGGCAGCGGCGGCGGACACCAGAACTCCGACGGGTTCCTCCCACCGGGTTTCCGGTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAGAAGGTTCTGGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTCAACAAGTCCGAGCCCTGGGACCTCCCTGAGAAAGCGCTGATGGGTGAAAAGGAGTGGTATTTCTTCAGCCTGCGAGACCGGAAATACCCGACCGGGTTGAGGACGAACCGGGCGACGGAGGCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCACCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGCCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAAGAAGATTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCGACTCGATTCCTCCGCCGACCCGAGTGAGAATGAGCTGCACGTGACCTGTTTCTCCACCAATAATGTCAACTACCCCGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAACCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGTGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGAAAATTCCCTTTTTATCTGTAATATCTGAAAAAGAATTAAGAACTTGACAAATGAAAACAGACTCCTTTTTTGTATTATTATTATTTTAGTATAACTTCGAAATGCC

Coding sequence (CDS)

ATGGAACACGGCGGCAGCGGCGGCGGACACCAGAACTCCGACGGGTTCCTCCCACCGGGTTTCCGGTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAGAAGGTTCTGGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTCAACAAGTCCGAGCCCTGGGACCTCCCTGAGAAAGCGCTGATGGGTGAAAAGGAGTGGTATTTCTTCAGCCTGCGAGACCGGAAATACCCGACCGGGTTGAGGACGAACCGGGCGACGGAGGCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCACCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGCCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAAGAAGATTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCGACTCGATTCCTCCGCCGACCCGAGTGAGAATGAGCTGCACGTGACCTGTTTCTCCACCAATAATGTCAACTACCCCGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAACCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGTGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGA

Protein sequence

MEHGGSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPSSPSSVSLPPRLDSSADPSENELHVTCFSTNNVNYPAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF

Homology

[Close]

BLAST of CmaCh16G004050.1 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78
Identity = 175/330 (53.03%), Postives = 194/330 (58.79%), Query Frame = 1


Query: 10  HQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMG 69
           H     +LPPGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MG
Sbjct: 10  HGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMG 69

Query: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 129
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFY+GRA
Sbjct: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRA 129

Query: 130 PKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKK-----TGAAMHGGS----- 189
           PKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVIS+VF+K     TGA   GG      
Sbjct: 130 PKGEKSNWVMHEYRLEGKFSYHFISR-SSKDEWVISRVFQKTTLASTGAVSEGGGGGGAT 189

Query: 190 ----------------STKKIRLDPEPSSPSSVSLPPRLD-------------------- 249
                           ST       +PSSPSSVSLPP LD                    
Sbjct: 190 VSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTN 249

Query: 250 SSADPSENELHVTCFSTNNVNYPAGG-------------GSDLSP---------SVFPNL 271
           ++   S    HV+CFST      A G             G D  P         S   N 
Sbjct: 250 TTVTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNVSTQSNF 309

[Close]

BLAST of CmaCh16G004050.1 vs. Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-72
Identity = 144/240 (60.00%), Postives = 175/240 (72.92%), Query Frame = 1


Query: 5   GSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPE 64
           G G      +  +PPGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPE
Sbjct: 8   GWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPE 67

Query: 65  KALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
           KA MGEKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT SL+GMKKTLVF
Sbjct: 68  KAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVF 127

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG---SST 184
           Y+GRAPKG+K+ WVMHE+RL GKF+YH++S+ S+KDEWV+ KV  K+G         SS+
Sbjct: 128 YKGRAPKGEKSCWVMHEYRLDGKFSYHYISS-SAKDEWVLCKVCLKSGVVSRETNLISSS 187

Query: 185 KKIRLDPEPSSPSSVSLPPRLDSSADPSENELHVTCFSTNNVNYPAGGGSDLSPSVFPNL 242
               +  E SS  S ++ P +++ A       HV+CFS N+  +         P+  P+L
Sbjct: 188 SSSAVTGEFSSAGS-AIAPIINTFATE-----HVSCFSNNSAAHTDASFHTFLPAPPPSL 240

[Close]

BLAST of CmaCh16G004050.1 vs. Swiss-Prot
Match: NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.0e-66
Identity = 143/244 (58.61%), Postives = 167/244 (68.44%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPSSPSSV 196
           WVMHE+RL GK + H L   ++K+EWVI +VF KT     GG       L    S  +  
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTA----GGKKIPISTLIRIGSYGTGS 196

Query: 197 SLPPRLDSSA--DPSENE-LHVTCFSTNNVNYPAGGGSDLSPSVFPNLLSFQENL--QAP 256
           SLPP  DSS   D ++ E ++V CFS    N     G+ L+    P+L S Q +     P
Sbjct: 197 SLPPLTDSSPYNDKTKTEPVYVPCFS----NQAETRGTILNCFSNPSLSSIQPDFLQMIP 249

[Close]

BLAST of CmaCh16G004050.1 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.3e-65
Identity = 134/209 (64.11%), Postives = 156/209 (74.64%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS---TKKIRLDPEPSSP 196
           WVMHE+RL GKF+ H L   ++K+EWVI +VF+K+     GG     +  IR+    +  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSA----GGKKIPISSLIRIGSLGTDF 195

Query: 197 SSVSLPPRLDSSA--DPSENE-LHVTCFS 220
           +   LP   DSS   D ++ E ++V CFS
Sbjct: 196 NPSLLPSLTDSSPYNDKTKTEPVYVPCFS 217

[Close]

BLAST of CmaCh16G004050.1 vs. Swiss-Prot
Match: NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-64
Identity = 128/205 (62.44%), Postives = 146/205 (71.22%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL  KV ++ FS+ AI  VDLNK EPWDLP KA MGEKEWYFF
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYFF 79

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  SL+GMKKTLVFY+GRAPKG KTN
Sbjct: 80  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 139

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPSSPSSV 196
           WVMHE+RL GK+    L   ++K+EWVI +VF+K       G+      LDP  +     
Sbjct: 140 WVMHEYRLEGKYCIENL-PQTAKNEWVICRVFQKRA----DGTKVPMSMLDPHINRMEPA 199

Query: 197 SLPPRLDSSADPS--ENELHVTCFS 220
            LP  +D S   S   +  HVTCFS
Sbjct: 200 GLPSLMDCSQRDSFTGSSSHVTCFS 217

[Close]

BLAST of CmaCh16G004050.1 vs. TrEMBL
Match: A0A0A0L787_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234520 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 9.5e-120
Identity = 234/319 (73.35%), Postives = 252/319 (79.00%), Query Frame = 1


Query: 7   GGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKA 66
           GGG ++SDG+LPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEKA
Sbjct: 4   GGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKA 63

Query: 67  LMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 126
           LMGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR
Sbjct: 64  LMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 123

Query: 127 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGSSTK 186
           GRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SKDEWVIS+VFKKT    GA MHGG + K
Sbjct: 124 GRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGG-AMK 183

Query: 187 KIRLDPEPSSPSSVSLPPRLDSSADPS---------------------ENELHVTCFSTN 246
           K   +PEPSSPSSVSLPP LDSS  PS                     E+ELHVTCFSTN
Sbjct: 184 KTCPNPEPSSPSSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFSTN 243

Query: 247 NVNYPAGGGSDLSPSVFPNLLSFQENLQAPF-FSPVGPPLVHLLTDAAELVGCGDGPAPE 298
           N+NY        S S FP   SFQENLQAPF  SPVGP LVHL+ +AA L G G GP PE
Sbjct: 244 NLNY-------CSASAFP---SFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPTPE 303

[Close]

BLAST of CmaCh16G004050.1 vs. TrEMBL
Match: M5X664_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026810mg PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-88
Identity = 197/351 (56.13%), Postives = 226/351 (64.39%), Query Frame = 1


Query: 9   GH--QNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKA 68
           GH    SD  LPPGFRFHPTDEELI +YLLKKVLDS F+  AIA VDLNK EPW+LP+KA
Sbjct: 8   GHFDHGSDTHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIAEVDLNKCEPWELPDKA 67

Query: 69  LMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 128
            MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFYR
Sbjct: 68  KMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYR 127

Query: 129 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRL 188
           GRAPKG+K+NWVMHE+RL GKFAYH+LS  SSKDEWVIS+VF+K+  +   G  +KK R+
Sbjct: 128 GRAPKGEKSNWVMHEYRLEGKFAYHYLSR-SSKDEWVISRVFQKSSGSTTNGPGSKKTRM 187

Query: 189 D----------PEPSSPSSVSLPPRLDSSADPSEN-----------------ELHVTCFS 248
                      PEPSSPSSVSLPP LDSS   + N                 + HV+CFS
Sbjct: 188 SNGSTSSISLYPEPSSPSSVSLPPLLDSSPYQNMNTAGLTDRDSCSYDSPIPKEHVSCFS 247

Query: 249 TN-----NVN-------------YPAGGGSDLSPSVFPNLLSFQENLQAP-FFSPV-GPP 298
           TN     N++              P+ GG     S FP+L S QENLQ P FFSP+ G  
Sbjct: 248 TNPNSGFNLSSSCFDLAHAQPPPQPSFGG----VSAFPSLRSLQENLQLPFFFSPMSGHQ 307

[Close]

BLAST of CmaCh16G004050.1 vs. TrEMBL
Match: V7BY28_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G074500g PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 7.3e-88
Identity = 189/335 (56.42%), Postives = 218/335 (65.07%), Query Frame = 1


Query: 12  NSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71
           +++  LPPGFRFHPTDEELI +YLLKKVLDS F+  AIA VDLNKSEPW+LPEKA MGEK
Sbjct: 10  HTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEK 69

Query: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT+SL+GMKKTLVFYRGRAPK
Sbjct: 70  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTSSLVGMKKTLVFYRGRAPK 129

Query: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT-----GAAMHGGSSTKKIRL 191
           G+K+NWVMHE+RL GKFAYH+LS  +SKDEWVIS+VF+K+     G+AM   S +KK R+
Sbjct: 130 GEKSNWVMHEYRLEGKFAYHYLSR-NSKDEWVISRVFQKSNTSNGGSAMSASSGSKKTRM 189

Query: 192 D-------PEPSSPSSVSLPPRLDSSA------------------DPSENELHVTCFST- 251
           +       PEPSSPSSV LPP LDSS                   D +  + HV+CFST 
Sbjct: 190 NTTNSSLCPEPSSPSSVYLPPLLDSSPYANTTTAVNFTGRNNCSYDSTTKKEHVSCFSTI 249

Query: 252 -------NNVNYPAGGGSDLSPS------------------VFPNLLSFQENLQAPFFSP 289
                   + N       DL PS                   FP+L S Q+NLQ PFF P
Sbjct: 250 AAATAAVVSPNNFTNASFDLPPSQSLGTDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFP 309

[Close]

BLAST of CmaCh16G004050.1 vs. TrEMBL
Match: A0A0B2RWM6_GLYSO (Protein CUP-SHAPED COTYLEDON 2 OS=Glycine soja GN=glysoja_001579 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86
Identity = 190/337 (56.38%), Postives = 217/337 (64.39%), Query Frame = 1


Query: 12  NSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71
           +++  LPPGFRFHPTDEELI +YLLKKVLDS F+  AIA VDLNKSEPW+LPEKA MGEK
Sbjct: 11  HTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEK 70

Query: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT SL+GMKKTLVFYRGRAPK
Sbjct: 71  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPK 130

Query: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT-------GAAMHGGSSTKKI 191
           G+K+NWVMHE+RL GKFAYH+LS +S KDEWVIS+VF+K+       G+ M   S++KK 
Sbjct: 131 GEKSNWVMHEYRLEGKFAYHYLSRNS-KDEWVISRVFQKSNTATNNGGSVMSASSNSKKT 190

Query: 192 RLDP------EPSSPSSVSLPPRLDSSA---------------DPSENELHVTCFST--- 251
           R++       EPSSPSSV LPP LD+S                D    + HV+CFST   
Sbjct: 191 RMNSTTSLIHEPSSPSSVFLPPLLDTSPYTNTANFTDRHNGSYDSITKKEHVSCFSTIAA 250

Query: 252 --------NNVNYPAGGGSDLSP------------------SVFPNLLSFQENLQAPF-F 286
                   NN N     G DLSP                  S FP+L S Q+NLQ PF F
Sbjct: 251 ATTAVVSPNNFN---NAGFDLSPSQPLATDPFARFQRNVDFSAFPSLRSLQDNLQFPFVF 310

[Close]

BLAST of CmaCh16G004050.1 vs. TrEMBL
Match: I1M355_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G274300 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86
Identity = 190/337 (56.38%), Postives = 217/337 (64.39%), Query Frame = 1


Query: 12  NSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEK 71
           +++  LPPGFRFHPTDEELI +YLLKKVLDS F+  AIA VDLNKSEPW+LPEKA MGEK
Sbjct: 11  HTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEK 70

Query: 72  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131
           EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT SL+GMKKTLVFYRGRAPK
Sbjct: 71  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPK 130

Query: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT-------GAAMHGGSSTKKI 191
           G+K+NWVMHE+RL GKFAYH+LS +S KDEWVIS+VF+K+       G+ M   S++KK 
Sbjct: 131 GEKSNWVMHEYRLEGKFAYHYLSRNS-KDEWVISRVFQKSNTATNNGGSVMSASSNSKKT 190

Query: 192 RLDP------EPSSPSSVSLPPRLDSSA---------------DPSENELHVTCFST--- 251
           R++       EPSSPSSV LPP LD+S                D    + HV+CFST   
Sbjct: 191 RMNSTTSLIHEPSSPSSVFLPPLLDTSPYTNTANFTDRHNGSYDSITKKEHVSCFSTIAA 250

Query: 252 --------NNVNYPAGGGSDLSP------------------SVFPNLLSFQENLQAPF-F 286
                   NN N     G DLSP                  S FP+L S Q+NLQ PF F
Sbjct: 251 ATTAVVSPNNFN---NAGFDLSPSQPLATDPFARFQRNVDFSAFPSLRSLQDNLQFPFVF 310

[Close]

BLAST of CmaCh16G004050.1 vs. TAIR10
Match: AT5G53950.1 (AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 294.3 bits (752), Expect = 8.5e-80
Identity = 175/330 (53.03%), Postives = 194/330 (58.79%), Query Frame = 1


Query: 10  HQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMG 69
           H     +LPPGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MG
Sbjct: 10  HGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMG 69

Query: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 129
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFY+GRA
Sbjct: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRA 129

Query: 130 PKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKK-----TGAAMHGGS----- 189
           PKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVIS+VF+K     TGA   GG      
Sbjct: 130 PKGEKSNWVMHEYRLEGKFSYHFISR-SSKDEWVISRVFQKTTLASTGAVSEGGGGGGAT 189

Query: 190 ----------------STKKIRLDPEPSSPSSVSLPPRLD-------------------- 249
                           ST       +PSSPSSVSLPP LD                    
Sbjct: 190 VSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTN 249

Query: 250 SSADPSENELHVTCFSTNNVNYPAGG-------------GSDLSP---------SVFPNL 271
           ++   S    HV+CFST      A G             G D  P         S   N 
Sbjct: 250 TTVTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNVSTQSNF 309

[Close]

BLAST of CmaCh16G004050.1 vs. TAIR10
Match: AT3G15170.1 (AT3G15170.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-73
Identity = 144/240 (60.00%), Postives = 175/240 (72.92%), Query Frame = 1


Query: 5   GSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPE 64
           G G      +  +PPGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPE
Sbjct: 8   GWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPE 67

Query: 65  KALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
           KA MGEKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT SL+GMKKTLVF
Sbjct: 68  KAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVF 127

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG---SST 184
           Y+GRAPKG+K+ WVMHE+RL GKF+YH++S+ S+KDEWV+ KV  K+G         SS+
Sbjct: 128 YKGRAPKGEKSCWVMHEYRLDGKFSYHYISS-SAKDEWVLCKVCLKSGVVSRETNLISSS 187

Query: 185 KKIRLDPEPSSPSSVSLPPRLDSSADPSENELHVTCFSTNNVNYPAGGGSDLSPSVFPNL 242
               +  E SS  S ++ P +++ A       HV+CFS N+  +         P+  P+L
Sbjct: 188 SSSAVTGEFSSAGS-AIAPIINTFATE-----HVSCFSNNSAAHTDASFHTFLPAPPPSL 240

[Close]

BLAST of CmaCh16G004050.1 vs. TAIR10
Match: AT5G07680.1 (AT5G07680.1 NAC domain containing protein 80)

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-67
Identity = 143/244 (58.61%), Postives = 167/244 (68.44%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPSSPSSV 196
           WVMHE+RL GK + H L   ++K+EWVI +VF KT     GG       L    S  +  
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTA----GGKKIPISTLIRIGSYGTGS 196

Query: 197 SLPPRLDSSA--DPSENE-LHVTCFSTNNVNYPAGGGSDLSPSVFPNLLSFQENL--QAP 256
           SLPP  DSS   D ++ E ++V CFS    N     G+ L+    P+L S Q +     P
Sbjct: 197 SLPPLTDSSPYNDKTKTEPVYVPCFS----NQAETRGTILNCFSNPSLSSIQPDFLQMIP 249

[Close]

BLAST of CmaCh16G004050.1 vs. TAIR10
Match: AT5G61430.1 (AT5G61430.1 NAC domain containing protein 100)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66
Identity = 134/209 (64.11%), Postives = 156/209 (74.64%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS---TKKIRLDPEPSSP 196
           WVMHE+RL GKF+ H L   ++K+EWVI +VF+K+     GG     +  IR+    +  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSA----GGKKIPISSLIRIGSLGTDF 195

Query: 197 SSVSLPPRLDSSA--DPSENE-LHVTCFS 220
           +   LP   DSS   D ++ E ++V CFS
Sbjct: 196 NPSLLPSLTDSSPYNDKTKTEPVYVPCFS 217

[Close]

BLAST of CmaCh16G004050.1 vs. TAIR10
Match: AT5G39610.1 (AT5G39610.1 NAC domain containing protein 6)

HSP 1 Score: 248.1 bits (632), Expect = 7.0e-66
Identity = 128/205 (62.44%), Postives = 146/205 (71.22%), Query Frame = 1


Query: 17  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMGEKEWYFF 76
           LPPGFRFHPTDEELI HYL  KV ++ FS+ AI  VDLNK EPWDLP KA MGEKEWYFF
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYFF 79

Query: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  SL+GMKKTLVFY+GRAPKG KTN
Sbjct: 80  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 139

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIRLDPEPSSPSSV 196
           WVMHE+RL GK+    L   ++K+EWVI +VF+K       G+      LDP  +     
Sbjct: 140 WVMHEYRLEGKYCIENL-PQTAKNEWVICRVFQKRA----DGTKVPMSMLDPHINRMEPA 199

Query: 197 SLPPRLDSSADPS--ENELHVTCFS 220
            LP  +D S   S   +  HVTCFS
Sbjct: 200 GLPSLMDCSQRDSFTGSSSHVTCFS 217

[Close]

BLAST of CmaCh16G004050.1 vs. NCBI nr
Match: gi|659112004|ref|XP_008456019.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 236/319 (73.98%), Postives = 252/319 (79.00%), Query Frame = 1


Query: 5   GSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPE 64
           G GG  ++SDG+LPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPE
Sbjct: 3   GGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPE 62

Query: 65  KALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
           KALMGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF
Sbjct: 63  KALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 122

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGSS 184
           YRGRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SKDEWVIS+VFKKT    GAAMHGG+ 
Sbjct: 123 YRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAM 182

Query: 185 TKKIRLDPEPSSPSSVSLPPRLDSSA-------------------DPSENELHVTCFSTN 244
            K  R +PEPSSPSSVSLPP LDSS                    D  E+ELHVTCFSTN
Sbjct: 183 KKTARPNPEPSSPSSVSLPPLLDSSPYTSAAADATVSSAAYADGDDTREHELHVTCFSTN 242

Query: 245 NVNYPAGGGSDLSPSVFPNLLSFQENLQAPF-FSPVGPPLVHLLTDAAELVGCGDGPAPE 298
           N+NY +      S S FP   SFQENLQAPF  SPVGP LVHL+  AA L GCG GP PE
Sbjct: 243 NLNYCS------SASAFP---SFQENLQAPFLISPVGPSLVHLVAGAANLDGCGGGPTPE 302

[Close]

BLAST of CmaCh16G004050.1 vs. NCBI nr
Match: gi|778680357|ref|XP_011651296.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 1.4e-119
Identity = 234/319 (73.35%), Postives = 252/319 (79.00%), Query Frame = 1


Query: 7   GGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKA 66
           GGG ++SDG+LPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEKA
Sbjct: 4   GGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKA 63

Query: 67  LMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 126
           LMGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR
Sbjct: 64  LMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 123

Query: 127 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGSSTK 186
           GRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SKDEWVIS+VFKKT    GA MHGG + K
Sbjct: 124 GRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGG-AMK 183

Query: 187 KIRLDPEPSSPSSVSLPPRLDSSADPS---------------------ENELHVTCFSTN 246
           K   +PEPSSPSSVSLPP LDSS  PS                     E+ELHVTCFSTN
Sbjct: 184 KTCPNPEPSSPSSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFSTN 243

Query: 247 NVNYPAGGGSDLSPSVFPNLLSFQENLQAPF-FSPVGPPLVHLLTDAAELVGCGDGPAPE 298
           N+NY        S S FP   SFQENLQAPF  SPVGP LVHL+ +AA L G G GP PE
Sbjct: 244 NLNY-------CSASAFP---SFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPTPE 303

[Close]

BLAST of CmaCh16G004050.1 vs. NCBI nr
Match: gi|658039601|ref|XP_008355378.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Malus domestica])

HSP 1 Score: 345.1 bits (884), Expect = 1.2e-91
Identity = 194/338 (57.40%), Postives = 221/338 (65.38%), Query Frame = 1


Query: 10  HQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMG 69
           H + D  LPPGFRFHPTDEELI +YLLKKVLD  F   AIA VDLNK EPW+LP+KA MG
Sbjct: 9   HFDHDTHLPPGFRFHPTDEELITYYLLKKVLDGSFIGRAIAEVDLNKCEPWELPDKAKMG 68

Query: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 129
           EKEWYFFSLRDRKYPTG+RTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFYRGRA
Sbjct: 69  EKEWYFFSLRDRKYPTGIRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRA 128

Query: 130 PKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMH---------GGSS 189
           PKG+K+NW+MHE+RL GKFAYH+LS  SSKDEWVIS+VF+K+G+A +         G  S
Sbjct: 129 PKGEKSNWIMHEYRLEGKFAYHYLSR-SSKDEWVISRVFQKSGSAXNGPGSKKTRIGNGS 188

Query: 190 TKKIRLDPEPSSPSSVSLPPRLDSSA-------------DPSENELHVTCFSTNNVNYPA 249
           T  I L PEPSSPSSVSLPP LDSS              D   +  HV+CFSTN    P 
Sbjct: 189 TSSISLYPEPSSPSSVSLPPLLDSSPYQPVSAAGDGCSYDSPISREHVSCFSTN----PN 248

Query: 250 GGGSDLSP-------------------SVFPNLLSFQENLQAPFFSPV-GPPLVHLLTDA 298
             G +LS                    S FP+L S QENLQ PFFSPV   P VH+    
Sbjct: 249 NNGFNLSASCFBLAHPPPPHPQSFGGVSAFPSLRSLQENLQLPFFSPVPSHPPVHV---G 308

[Close]

BLAST of CmaCh16G004050.1 vs. NCBI nr
Match: gi|694422953|ref|XP_009339299.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Pyrus x bretschneideri])

HSP 1 Score: 340.5 bits (872), Expect = 2.9e-90
Identity = 192/332 (57.83%), Postives = 222/332 (66.87%), Query Frame = 1


Query: 10  HQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMG 69
           H + D +LPPGFRFHPTDEELI +YLLKKVLD  F+  AIA VDLNK EPW+LP+KA MG
Sbjct: 8   HFDHDTYLPPGFRFHPTDEELITYYLLKKVLDGSFTGRAIAEVDLNKCEPWELPDKAKMG 67

Query: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 129
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFYRGRA
Sbjct: 68  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRA 127

Query: 130 PKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMH---------GGSS 189
           PKG+K+NW+MHE+RL G+FAYH+LS  S+KDEWVIS+VF+K+G+A +         G  S
Sbjct: 128 PKGEKSNWIMHEYRLEGRFAYHYLSR-STKDEWVISRVFQKSGSAGNGLGSKKTRIGNGS 187

Query: 190 TKKIRLDPEPSSPSSVSLPPRLDSSA-------------DPSENELHVTCFST----NNV 249
           T  I L PEPSSPSSVSLP  LDSS              D   +  HV+CFST    N  
Sbjct: 188 TSSISLYPEPSSPSSVSLPALLDSSPYQPVSAAGDGCSYDSPISREHVSCFSTNPNNNGF 247

Query: 250 NYPAGGGSDLSP-----------SVFPNLLSFQENLQAP-FFSPV-GPPLVHL---LTDA 298
           N+ A       P           S FP+L S QENLQ P FFSPV   P VH+       
Sbjct: 248 NFSASRFDLARPPPPQPQSFGGVSAFPSLRSLQENLQLPFFFSPVPSHPPVHVGGSFAGG 307

[Close]

BLAST of CmaCh16G004050.1 vs. NCBI nr
Match: gi|694332260|ref|XP_009356773.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Pyrus x bretschneideri])

HSP 1 Score: 337.8 bits (865), Expect = 1.9e-89
Identity = 191/332 (57.53%), Postives = 221/332 (66.57%), Query Frame = 1


Query: 10  HQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKALMG 69
           H + D +LPPGFRFHPTDEELI +YLLKKVLD  F+  AIA VDLNK EPW+LP+KA MG
Sbjct: 8   HFDHDTYLPPGFRFHPTDEELITYYLLKKVLDGSFTGRAIAEVDLNKCEPWELPDKAKMG 67

Query: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 129
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT +L+GMKKTLVFYRGRA
Sbjct: 68  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRA 127

Query: 130 PKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMH---------GGSS 189
           PKG+K+NW+MHE+RL G+FAYH+LS  S+KDEWVIS+VF+K+G+A +         G  S
Sbjct: 128 PKGEKSNWIMHEYRLEGRFAYHYLSR-STKDEWVISRVFQKSGSAGNGLGSKKTRIGNGS 187

Query: 190 TKKIRLDPEPSSPSSVSLPPRLDSSA-------------DPSENELHVTCFST----NNV 249
           T  I   PEPSSPSSVSLP  LDSS              D   +  HV+CFST    N  
Sbjct: 188 TSSISPYPEPSSPSSVSLPALLDSSPYQPVSAAGDGCSYDSPISREHVSCFSTNPNNNGF 247

Query: 250 NYPAGGGSDLSP-----------SVFPNLLSFQENLQAP-FFSPV-GPPLVHL---LTDA 298
           N+ A       P           S FP+L S QENLQ P FFSPV   P VH+       
Sbjct: 248 NFSASRFDLARPPPPQPQSFGGVSAFPSLRSLQENLQLPFFFSPVPSHPPVHVGGSFAGG 307

The following BLAST results are available for this feature:

BLAST of CmaCh16G004050.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC98_ARATH	1.5e-78	53.03	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC54_ARATH	2.1e-72	60.00	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1	[more]
NAC79_ARATH	3.0e-66	58.61	NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1	[more]
NC100_ARATH	3.3e-65	64.11	NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1	[more]
NAC92_ARATH	1.2e-64	62.44	NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1	[more]

BLAST of CmaCh16G004050.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L787_CUCSA	9.5e-120	73.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234520 PE=4 SV=1	[more]
M5X664_PRUPE	1.1e-88	56.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026810mg PE=4 SV=1	[more]
V7BY28_PHAVU	7.3e-88	56.42	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G074500g PE=4 SV=1	[more]
A0A0B2RWM6_GLYSO	1.8e-86	56.38	Protein CUP-SHAPED COTYLEDON 2 OS=Glycine soja GN=glysoja_001579 PE=4 SV=1	[more]
I1M355_SOYBN	1.8e-86	56.38	Uncharacterized protein OS=Glycine max GN=GLYMA_13G274300 PE=4 SV=1	[more]

BLAST of CmaCh16G004050.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53950.1	8.5e-80	53.03	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT3G15170.1	1.2e-73	60.00	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT5G07680.1	1.7e-67	58.61	NAC domain containing protein 80	[more]
AT5G61430.1	1.8e-66	64.11	NAC domain containing protein 100	[more]
AT5G39610.1	7.0e-66	62.44	NAC domain containing protein 6	[more]

BLAST of CmaCh16G004050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112004\|ref\|XP_008456019.1\|	3.8e-122	73.98	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo]	[more]
gi\|778680357\|ref\|XP_011651296.1\|	1.4e-119	73.35	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis sativus]	[more]
gi\|658039601\|ref\|XP_008355378.1\|	1.2e-91	57.40	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Malus domestica]	[more]
gi\|694422953\|ref\|XP_009339299.1\|	2.9e-90	57.83	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Pyrus x bretschneideri]	[more]
gi\|694332260\|ref\|XP_009356773.1\|	1.9e-89	57.53	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G004050	CmaCh16G004050	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G004050.1	CmaCh16G004050.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G004050.1.three_prime_UTR.1	CmaCh16G004050.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G004050.1.CDS.3	CmaCh16G004050.1.CDS.3	CDS
CmaCh16G004050.1.CDS.2	CmaCh16G004050.1.CDS.2	CDS
CmaCh16G004050.1.CDS.1	CmaCh16G004050.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G004050.1.exon.3	CmaCh16G004050.1.exon.3	exon
CmaCh16G004050.1.exon.2	CmaCh16G004050.1.exon.2	exon
CmaCh16G004050.1.exon.1	CmaCh16G004050.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 18..144 score: 5.6
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 17..170 score: 59
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 16..170 score: 1.44
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 11..205 score: 1.4E
None	No IPR available	PANTHER	PTHR31744:SF22	PROTEIN CUP-SHAPED COTYLEDON 1-RELATED	coord: 11..205 score: 1.4E