CmaCh15G006440.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G006440.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	F24J8.12 protein
Location	Cma_Chr15 : 3043211 .. 3044035 (-)
Sequence length	825

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCTTGCATTAGCAAATGCAAACCCAAGGCCATCAAACCGCCGCCGTCGCCTCTTTTTGATTTCAACAATATTGTTCAAGACAAGCTGGTTGTAATTCCCCAACCGCCGCCGTTGGCTGTCGCCGTCGCCGCCGCCGCCGCCCCTTCTCTCTCTCTTAGTAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTCCCTCCTCTTCCTCCACTTGTCTCTCTTCCACTACAACTACCACGACAACCAACAGCTCTTTCTCAACCGCCTCTTCCCGTTCCCCAATTCTCCCACATGACTACTTCTGGTCGCCTTACAATCAAAACCCTCACGTTGTTCGGATCAATTCCCTTAAAGCTTCCGCCTTTTTGCCTCCGTTCAACCCGGTTTCCCCGGTGGTGGTTCGACAGCGCATGCGTCACCCGTCTCCCCAAAGGGTATTGAGATCGACATCGACATCGACACCCCAGAAGAGAGTTCGACAGGCTTCCCCATCGCCGGTTCGCCAGAAGAGCTTCAGGAAGGAGGTTCAACGGCCTCTGTCGCCGTCGCCAAGTAGACGGTCAAGCGGAGAGAAATGCCGGGTTGCAACCGGTCTTATCACAGGAGCGTCAGTGAAGACTGTTGGTCATAAAAGCCGATCGCCGGCCAAGGGTTGTGAGATGAGGAAGGAAAAAATTACTTGCATTCATAGGATCAGTTCAAAAATTGATGAAGCTGCGGCGAGAGAGGCGGTGTTGAATGAGGGAGATTTAGATTCGGCGGCGGCGATGGAGGATATTGATAATCCGTTAATCTCGTTGGATTGCTTTATATTTCTATAG

mRNA sequence

ATGGGATCTTGCATTAGCAAATGCAAACCCAAGGCCATCAAACCGCCGCCGTCGCCTCTTTTTGATTTCAACAATATTGTTCAAGACAAGCTGGTTGTAATTCCCCAACCGCCGCCGTTGGCTGTCGCCGTCGCCGCCGCCGCCGCCCCTTCTCTCTCTCTTAGTAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTCCCTCCTCTTCCTCCACTTGTCTCTCTTCCACTACAACTACCACGACAACCAACAGCTCTTTCTCAACCGCCTCTTCCCGTTCCCCAATTCTCCCACATGACTACTTCTGGTCGCCTTACAATCAAAACCCTCACGTTGTTCGGATCAATTCCCTTAAAGCTTCCGCCTTTTTGCCTCCGTTCAACCCGGTTTCCCCGGTGGTGGTTCGACAGCGCATGCGTCACCCGTCTCCCCAAAGGGTATTGAGATCGACATCGACATCGACACCCCAGAAGAGAGTTCGACAGGCTTCCCCATCGCCGGTTCGCCAGAAGAGCTTCAGGAAGGAGGTTCAACGGCCTCTGTCGCCGTCGCCAAGTAGACGGTCAAGCGGAGAGAAATGCCGGGTTGCAACCGGTCTTATCACAGGAGCGTCAGTGAAGACTGTTGGTCATAAAAGCCGATCGCCGGCCAAGGGTTGTGAGATGAGGAAGGAAAAAATTACTTGCATTCATAGGATCAGTTCAAAAATTGATGAAGCTGCGGCGAGAGAGGCGGTGTTGAATGAGGGAGATTTAGATTCGGCGGCGGCGATGGAGGATATTGATAATCCGTTAATCTCGTTGGATTGCTTTATATTTCTATAG

Coding sequence (CDS)

ATGGGATCTTGCATTAGCAAATGCAAACCCAAGGCCATCAAACCGCCGCCGTCGCCTCTTTTTGATTTCAACAATATTGTTCAAGACAAGCTGGTTGTAATTCCCCAACCGCCGCCGTTGGCTGTCGCCGTCGCCGCCGCCGCCGCCCCTTCTCTCTCTCTTAGTAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTCCCTCCTCTTCCTCCACTTGTCTCTCTTCCACTACAACTACCACGACAACCAACAGCTCTTTCTCAACCGCCTCTTCCCGTTCCCCAATTCTCCCACATGACTACTTCTGGTCGCCTTACAATCAAAACCCTCACGTTGTTCGGATCAATTCCCTTAAAGCTTCCGCCTTTTTGCCTCCGTTCAACCCGGTTTCCCCGGTGGTGGTTCGACAGCGCATGCGTCACCCGTCTCCCCAAAGGGTATTGAGATCGACATCGACATCGACACCCCAGAAGAGAGTTCGACAGGCTTCCCCATCGCCGGTTCGCCAGAAGAGCTTCAGGAAGGAGGTTCAACGGCCTCTGTCGCCGTCGCCAAGTAGACGGTCAAGCGGAGAGAAATGCCGGGTTGCAACCGGTCTTATCACAGGAGCGTCAGTGAAGACTGTTGGTCATAAAAGCCGATCGCCGGCCAAGGGTTGTGAGATGAGGAAGGAAAAAATTACTTGCATTCATAGGATCAGTTCAAAAATTGATGAAGCTGCGGCGAGAGAGGCGGTGTTGAATGAGGGAGATTTAGATTCGGCGGCGGCGATGGAGGATATTGATAATCCGTTAATCTCGTTGGATTGCTTTATATTTCTATAG

Protein sequence

MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISPYPPSPSPSSSSTCLSSTTTTTTTNSSFSTASSRSPILPHDYFWSPYNQNPHVVRINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASPSPVRQKSFRKEVQRPLSPSPSRRSSGEKCRVATGLITGASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAMEDIDNPLISLDCFIFL

Homology

[Close]

BLAST of CmaCh15G006440.1 vs. TrEMBL
Match: A0A0A0KIF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G354870 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 193/283 (68.20%), Postives = 210/283 (74.20%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNN-IVQDKLVVIPQP-PPLAVAVAAAAAPSLSLSNKI 60
           MGSCISKCKPK +K PP  LFDFNN +VQDKLVVIPQP  PL      +A PSLSL NKI
Sbjct: 1   MGSCISKCKPKMMKQPP--LFDFNNLVVQDKLVVIPQPLSPLLTTKTTSATPSLSLHNKI 60

Query: 61  SPYPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSR-SPILPHDYFWSPYNQNPHVV 120
           SPYPPSPSPSSSS    TCLSS T ++T N+SFSTASS  SPI  H YF SPYNQNPH+ 
Sbjct: 61  SPYPPSPSPSSSSISSFTCLSSNTPSST-NTSFSTASSSPSPISSHHYFPSPYNQNPHLF 120

Query: 121 RINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASPSPVRQKSF 180
            INSLKA AF PP  P+SP++    +RHPSPQRV    S S PQKR R ASPSP+RQKSF
Sbjct: 121 PINSLKAHAFRPPVKPISPLL----LRHPSPQRV----SRSIPQKRPRPASPSPIRQKSF 180

Query: 181 RKEV-QRPL-SPSPSRRSSGEKCRVATGLITGASVKTVGHKSRSPAKGCEMRKEKITCIH 240
           RKEV QRPL SPSP+RR S EKC+VA   I G     V  KSRSP +   M+KE ITCIH
Sbjct: 181 RKEVLQRPLSSPSPTRRFSREKCQVALAPING-----VRPKSRSPVRDSAMKKE-ITCIH 240

Query: 241 RISSKIDEAAAREAVLNEGDLDSAAAMEDIDNPLISLDCFIFL 275
           RISSKIDE A +EAV   GDLDS  AMEDIDNPLISLDCFIFL
Sbjct: 241 RISSKIDEVAVKEAV---GDLDSVVAMEDIDNPLISLDCFIFL 263

[Close]

BLAST of CmaCh15G006440.1 vs. TrEMBL
Match: M5XHQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021954mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 136/312 (43.59%), Postives = 173/312 (55.45%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MGSCISKC+P+        + D  N VQDKLV+   P  LA       AP +S SNKISP
Sbjct: 1   MGSCISKCRPRR------HMIDELNHVQDKLVISQAPSRLA-------APPISASNKISP 60

Query: 61  YPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSRSPILP--------HDYFWSPYNQ 120
            PPSPS S+SS    TC ++T+T+ T++S  ST SS S +L         +++ WS Y +
Sbjct: 61  SPPSPSNSTSSASSFTCTTNTSTSHTSSSLTSTLSSASSVLSSKIDRSFSNEFLWSCYKE 120

Query: 121 NPHVVRINSLKASAFLP---PFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASP 180
           NPHVVRINSLK ++F     P  P+ P  V+++        +  + ++ TPQKRVR +SP
Sbjct: 121 NPHVVRINSLKEASFSSSSLPQKPLLPAAVKKKQ-----PNLKNANASVTPQKRVRSSSP 180

Query: 181 SPV-RQKSFRKEVQRP-------------LSPSPSRR---------SSGEKCRVATGLIT 240
           +P+ RQKSFRKE +RP              SPSPSRR         SS  K       + 
Sbjct: 181 TPLTRQKSFRKEPERPPMISAYSHPSRILRSPSPSRRFNMANPPKESSHSKPNALN--LR 240

Query: 241 GASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAMEDID 275
            A+     + SR        R E  T IHRISSKIDE A  EA+ +   +DS  A EDID
Sbjct: 241 PAASSNYSNSSRLLRPYLRSR-ETETRIHRISSKIDEVAVGEALADY--MDSLPA-EDID 288

[Close]

BLAST of CmaCh15G006440.1 vs. TrEMBL
Match: A0A067K9I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12183 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.4e-31
Identity = 129/316 (40.82%), Postives = 174/316 (55.06%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MG CISKCKPK      + + D N +VQDKLV+I QPP            S+  SNKI+P
Sbjct: 1   MGCCISKCKPKK-----NSIQDIN-LVQDKLVIISQPPK-----NPKTPISIPTSNKITP 60

Query: 61  Y--PPSPSPSSSSTCLSSTTT--------TTTTNSSFSTASSRSPILP--------HDYF 120
              PPSP+ SS+S+  S T T        T+T +SS ST+S  S  +         +++ 
Sbjct: 61  IISPPSPTTSSTSSISSFTCTNNSSNGISTSTISSSSSTSSGSSSSISTLKDRSFSNEFL 120

Query: 121 WSPYNQNPHVVRINSLK-ASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVR 180
           WS   +NPHV+RINS+K  S FL P N  S  +      +  PQ++    + STPQKR+R
Sbjct: 121 WSCIKENPHVIRINSIKECSQFLTPPNVHSRKLESPVKNYSIPQKL----NKSTPQKRIR 180

Query: 181 QASPSPV-RQKSFRKEVQR-------PL-SPSPSRRSSG--------------EKCRVAT 240
             SP+P+ RQKSFR+E +R       PL SPS SRR +G                C+V  
Sbjct: 181 SDSPTPLNRQKSFRREAERINSLHSLPLKSPSASRRFNGRGFSIKENGSKPMVSNCKVND 240

Query: 241 GLITGASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAM 275
             ++  S +   H++    + C ++  + TCIHRISSKI+E A ++A L + D +S    
Sbjct: 241 YSVSSLSSRKENHRN---PRSC-LKNNRQTCIHRISSKINEVAVQQA-LAQHDSESVPME 296

[Close]

BLAST of CmaCh15G006440.1 vs. TrEMBL
Match: A9PBA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s07680g PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 133/332 (40.06%), Postives = 175/332 (52.71%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVV--IPQPPPLAVAVAAAAAPSLSLSNKI 60
           MG CISKC+PK             N V+DKLV+   P+ P + V V          SNKI
Sbjct: 1   MGCCISKCRPKKRSFEEC----HGNNVEDKLVISQAPKTPKIPVPV----------SNKI 60

Query: 61  SPYPPSPSPSSSST------CLSSTTTTTTTNSSFSTASS----RSPILPHDYFWSPYNQ 120
           SP PPSP+ S+SS+      C +S TTT ++ SS S+ SS    +     +++ WS   +
Sbjct: 61  SPSPPSPTTSTSSSGSAFTCCTNSNTTTISSCSSLSSGSSILNSKDRSFSNEFLWSCVKE 120

Query: 121 NPHVVRINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVL-------RSTSTSTPQKRVR 180
           NPH++RINS+K  + L      SP V  +++  P+ Q V        +  +TSTP KRVR
Sbjct: 121 NPHIIRINSIKERSQL----LASPNVYSRKLGSPAKQVVAPMQQSIPQKVNTSTPHKRVR 180

Query: 181 QASPSPV-RQKSFRKEVQR-------PL-----SPSPSRRSSGEKCRVATGLIT-----G 240
             SP+ + RQKSFR+E  R       P+     SPSPSRR +G+  R   G++T      
Sbjct: 181 SNSPTALTRQKSFRREPDRFNPSYSLPISRTLRSPSPSRRFNGDSGR---GILTITPKES 240

Query: 241 ASVKTVGHK-SRSPAKGCEMRKEKI--------------------TCIHRISSKIDEAAA 275
            S +TVG + + S +     RKE +                    TCIHRISSKIDE A 
Sbjct: 241 CSARTVGARVNSSNSFSSTSRKENLRLPSQYINSSQLRSCLRNRETCIHRISSKIDEDAV 300

[Close]

BLAST of CmaCh15G006440.1 vs. TrEMBL
Match: B9S2R2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0560750 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 129/334 (38.62%), Postives = 168/334 (50.30%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MG CISKC+PK  K     ++  ++ VQDKLV+  Q P     +      SLS +NKISP
Sbjct: 1   MGCCISKCRPK--KHYAIQVYS-DHSVQDKLVISQQAPKSTSKITPIVPSSLS-NNKISP 60

Query: 61  YPPSPSPSSSSTCLSSTTTTTTTNSSFSTASSRSPI--------------LPHDYFWSPY 120
            PPSP+ SS+S+  S T + +T  S  ST SS S +                +++ WS  
Sbjct: 61  SPPSPTTSSTSSISSFTCSNSTNTSGSSTISSCSSLSSGSSSILTSKDRSFSNEFLWSCV 120

Query: 121 NQNPHVVRINSLKA-SAFLPPFNPVSPVVVRQRMRHPSPQRVL-------RSTSTSTPQK 180
            +NPHV+RINS+K  S  L P N    V+VR+    P+ Q  L       +  + STPQK
Sbjct: 121 KENPHVIRINSIKEYSQLLVPPN----VLVRKFDSSPAKQASLPLKQSSPQKVNASTPQK 180

Query: 181 RVRQASPSPV-RQKSFRKEVQRPL----------SPSPSRRSSGEKCRVATGLITGASVK 240
           RVR  SP+PV RQKSFR+E +R            S SPSRR  G+  R   G++T    +
Sbjct: 181 RVRSNSPTPVNRQKSFRRESERFTYNSLQCRTLRSQSPSRRFDGDSGR---GILTSTPKE 240

Query: 241 TVGHKSRSPAK---------GCEMRKEKI------------------TCIHRISSKIDEA 275
           +   +     K            +R+E +                  TCIHRISSKIDE 
Sbjct: 241 SCSKRMAGNIKVNAANNNYVSSSLRRENLIKPVSPYSNHHQVRFSKETCIHRISSKIDEV 300

[Close]

BLAST of CmaCh15G006440.1 vs. TAIR10
Match: AT1G21510.1 (AT1G21510.1 unknown protein)

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-14
Identity = 101/336 (30.06%), Postives = 144/336 (42.86%), Query Frame = 1


Query: 1   MGSCISKCKPKA---------------------IKPPPSPLFDFNNIVQDKLVVIPQPPP 60
           MG CISKC PK+                     +   PS +   N   +++   IP P  
Sbjct: 1   MGCCISKCSPKSKDFKEAEEPHEKYCSVPEKMFMSRCPSRVSPLNLPEKNRFHPIPVPNK 60

Query: 61  LAVAVAAAAAPSLSLSNKISPYPPSPSPSSSSTCLSSTTTTTTTNSSFSTASSRSPILPH 120
                     P   +  K++ + P    ++S++ LSS+ ++ +T SS S +  RS    +
Sbjct: 61  FINIPGKVIPPPSPV--KLASFSPIQPSTTSNSSLSSSNSSLSTASSVSVSKERS--FSN 120

Query: 121 DYFWSPYNQNPHVVRINSLK-ASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTP-- 180
           D+  + Y +N HV RINSL+ AS  +    P      R   R  SP  V+ S +++TP  
Sbjct: 121 DFLRACYQENSHVARINSLREASLSMKTTKP------RYPSRFDSP--VIPSRNSTTPNR 180

Query: 181 -----------QKRVRQASP---SPVRQKSFRKEVQRPL---------------SPSPSR 240
                       KR R+ SP   S  RQKSFR++ +R +               SPSPSR
Sbjct: 181 ANEDSKRGSNCSKRTRELSPNHRSLTRQKSFRQDQERVVISSSSNSLTKGKYLKSPSPSR 240

Query: 241 RSSG---------EKCRVATGLITGASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKID 275
           R  G          +  VA   +T +S         S  K C M       IHRISSKID
Sbjct: 241 RYEGNFLKSPSPSRRFGVAAASLTVSSCVRKDSLDLSGRKICHMSNRSEPRIHRISSKID 300

[Close]

BLAST of CmaCh15G006440.1 vs. NCBI nr
Match: gi|659081967|ref|XP_008441600.1| (PREDICTED: serine/threonine-protein kinase WNK4 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 2.4e-78
Identity = 195/285 (68.42%), Postives = 216/285 (75.79%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQP-PPLAVAVAA---AAAPSLSLSN 60
           MGSCISKCKPK ++ PP  LFDFNN+VQDKLVVIPQP  PL  + A    +A PSLSL N
Sbjct: 1   MGSCISKCKPKMMRQPP--LFDFNNLVQDKLVVIPQPLSPLLTSTATKTTSATPSLSLHN 60

Query: 61  KISPYPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSR-SPILPHDYFWSPYNQNPH 120
           KISPYPPSPSPSSSS    TCLSS T+++T N+SFSTASS  SPI  H YF SPYNQNPH
Sbjct: 61  KISPYPPSPSPSSSSISSFTCLSSNTSSST-NTSFSTASSSPSPISSHHYFPSPYNQNPH 120

Query: 121 VVRINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASPSPVRQK 180
           + RINSLKA AF  P  P+SP+VV    RHPSPQRV    S STPQKR+R ASPSP+RQK
Sbjct: 121 LFRINSLKAHAFRSPVKPISPLVV----RHPSPQRV----SRSTPQKRLRPASPSPIRQK 180

Query: 181 SFRKEV-QRPL-SPSPSRRSSGEKCRVATGLITGASVKTVGHKSRSPAKGCEMRKEKITC 240
           SFRKEV QRPL SPSP+RR S EKC+VA   I G     V  KSRSP +G  M+KE ITC
Sbjct: 181 SFRKEVLQRPLSSPSPTRRFSREKCQVALAPING-----VRPKSRSPVRGSAMKKE-ITC 240

Query: 241 IHRISSKIDEAAAREAVLNEGDLDSAAAMEDIDNPLISLDCFIFL 275
           IHRISSKID+ A +EAV   GDLDS  AMED+DNPLISLDCFIFL
Sbjct: 241 IHRISSKIDDVAVKEAV---GDLDSVVAMEDMDNPLISLDCFIFL 265

[Close]

BLAST of CmaCh15G006440.1 vs. NCBI nr
Match: gi|778715012|ref|XP_011657327.1| (PREDICTED: putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 2.2e-76
Identity = 193/283 (68.20%), Postives = 210/283 (74.20%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNN-IVQDKLVVIPQP-PPLAVAVAAAAAPSLSLSNKI 60
           MGSCISKCKPK +K PP  LFDFNN +VQDKLVVIPQP  PL      +A PSLSL NKI
Sbjct: 1   MGSCISKCKPKMMKQPP--LFDFNNLVVQDKLVVIPQPLSPLLTTKTTSATPSLSLHNKI 60

Query: 61  SPYPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSR-SPILPHDYFWSPYNQNPHVV 120
           SPYPPSPSPSSSS    TCLSS T ++T N+SFSTASS  SPI  H YF SPYNQNPH+ 
Sbjct: 61  SPYPPSPSPSSSSISSFTCLSSNTPSST-NTSFSTASSSPSPISSHHYFPSPYNQNPHLF 120

Query: 121 RINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASPSPVRQKSF 180
            INSLKA AF PP  P+SP++    +RHPSPQRV    S S PQKR R ASPSP+RQKSF
Sbjct: 121 PINSLKAHAFRPPVKPISPLL----LRHPSPQRV----SRSIPQKRPRPASPSPIRQKSF 180

Query: 181 RKEV-QRPL-SPSPSRRSSGEKCRVATGLITGASVKTVGHKSRSPAKGCEMRKEKITCIH 240
           RKEV QRPL SPSP+RR S EKC+VA   I G     V  KSRSP +   M+KE ITCIH
Sbjct: 181 RKEVLQRPLSSPSPTRRFSREKCQVALAPING-----VRPKSRSPVRDSAMKKE-ITCIH 240

Query: 241 RISSKIDEAAAREAVLNEGDLDSAAAMEDIDNPLISLDCFIFL 275
           RISSKIDE A +EAV   GDLDS  AMEDIDNPLISLDCFIFL
Sbjct: 241 RISSKIDEVAVKEAV---GDLDSVVAMEDIDNPLISLDCFIFL 263

[Close]

BLAST of CmaCh15G006440.1 vs. NCBI nr
Match: gi|645226748|ref|XP_008220186.1| (PREDICTED: putative protein TPRXL [Prunus mume])

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 139/313 (44.41%), Postives = 176/313 (56.23%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MGSCISKC+P+        + D  N VQDKLV+   P  LA       AP +S SNKISP
Sbjct: 1   MGSCISKCRPRR-----RHMIDELNHVQDKLVISQAPSRLA-------APPISASNKISP 60

Query: 61  YPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSRSPILP--------HDYFWSPYNQ 120
            PPSPS S+SS    TC ++T+T+ T++S  S+ SS S +L         +++ WS Y +
Sbjct: 61  SPPSPSNSTSSASSFTCTTNTSTSHTSSSLTSSLSSASSVLSSKIDRSFSNEFLWSCYKE 120

Query: 121 NPHVVRINSLKASAFLP---PFNPVSPVVVRQRMRHPSPQRVLRSTSTS-TPQKRVRQAS 180
           NPHVVRINSLK ++F     P  P+ P  V+++      Q  L++T+ S TPQKRVR +S
Sbjct: 121 NPHVVRINSLKEASFSSSSLPQKPLLPAAVKKK------QPNLKNTNASVTPQKRVRSSS 180

Query: 181 PSPV-RQKSFRKEVQRP-------------LSPSPSRR---------SSGEKCRVATGLI 240
           P+P+ RQKSFRKE +RP              SPSPSRR         SS  K       +
Sbjct: 181 PTPLTRQKSFRKEPERPPMISAYSHPSRILRSPSPSRRFNMANPPKESSHSKPNALN--L 240

Query: 241 TGASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAMEDI 275
             A+     + SR        R E  T IHRISSKIDE A  EA+ +   +DS  A EDI
Sbjct: 241 RPAASSNYSNSSRLLRPYLRSR-ETETRIHRISSKIDEVAVGEALADY--MDSLPA-EDI 289

[Close]

BLAST of CmaCh15G006440.1 vs. NCBI nr
Match: gi|596239463|ref|XP_007224443.1| (hypothetical protein PRUPE_ppa021954mg [Prunus persica])

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34
Identity = 136/312 (43.59%), Postives = 173/312 (55.45%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MGSCISKC+P+        + D  N VQDKLV+   P  LA       AP +S SNKISP
Sbjct: 1   MGSCISKCRPRR------HMIDELNHVQDKLVISQAPSRLA-------APPISASNKISP 60

Query: 61  YPPSPSPSSSS----TCLSSTTTTTTTNSSFSTASSRSPILP--------HDYFWSPYNQ 120
            PPSPS S+SS    TC ++T+T+ T++S  ST SS S +L         +++ WS Y +
Sbjct: 61  SPPSPSNSTSSASSFTCTTNTSTSHTSSSLTSTLSSASSVLSSKIDRSFSNEFLWSCYKE 120

Query: 121 NPHVVRINSLKASAFLP---PFNPVSPVVVRQRMRHPSPQRVLRSTSTSTPQKRVRQASP 180
           NPHVVRINSLK ++F     P  P+ P  V+++        +  + ++ TPQKRVR +SP
Sbjct: 121 NPHVVRINSLKEASFSSSSLPQKPLLPAAVKKKQ-----PNLKNANASVTPQKRVRSSSP 180

Query: 181 SPV-RQKSFRKEVQRP-------------LSPSPSRR---------SSGEKCRVATGLIT 240
           +P+ RQKSFRKE +RP              SPSPSRR         SS  K       + 
Sbjct: 181 TPLTRQKSFRKEPERPPMISAYSHPSRILRSPSPSRRFNMANPPKESSHSKPNALN--LR 240

Query: 241 GASVKTVGHKSRSPAKGCEMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAMEDID 275
            A+     + SR        R E  T IHRISSKIDE A  EA+ +   +DS  A EDID
Sbjct: 241 PAASSNYSNSSRLLRPYLRSR-ETETRIHRISSKIDEVAVGEALADY--MDSLPA-EDID 288

[Close]

BLAST of CmaCh15G006440.1 vs. NCBI nr
Match: gi|470109729|ref|XP_004291143.1| (PREDICTED: protein AF-9 [Fragaria vesca subsp. vesca])

HSP 1 Score: 146.4 bits (368), Expect = 7.5e-32
Identity = 131/311 (42.12%), Postives = 168/311 (54.02%), Query Frame = 1


Query: 1   MGSCISKCKPKAIKPPPSPLFDFNNIVQDKLVVIPQPPPLAVAVAAAAAPSLSLSNKISP 60
           MGSCISKC PK+          F N VQDKLV+  QPP     +     PS   SNKISP
Sbjct: 1   MGSCISKCSPKSQFQIEED-DQFCNQVQDKLVISTQPPKPTTPI-----PSHHHSNKISP 60

Query: 61  YPPSPSPSSSSTCLSSTTTTTTTNSSFSTASSRSPI----------------LPHDYFWS 120
           +P SPS S+SS    S  TTTTTNS+ + +SS S +                  +++ WS
Sbjct: 61  FPSSPSHSTSSASSFSYCTTTTTNSNSTLSSSSSTLSSSASSVSSSSKIDRSFSNEFLWS 120

Query: 121 PYNQNPHVVRINSLKASAFLPPFNPVSPVVVRQRMRHPSPQRVLRSTST--STPQKRVR- 180
            Y +NPH+ RI S+K +       PV+   +R+   H  P  + R   +  +TPQKRVR 
Sbjct: 121 CYKENPHISRIASIKEAQ-----KPVAAATLRKHHHHYQPSPINRGNGSPQTTPQKRVRT 180

Query: 181 QASPSPVRQKSFRKEVQRPL------SPSPSRR-SSGEKCRVATGLITGASVKTVGH-KS 240
             SP+  RQKSFRKE ++P+      SPSPSRR +  EK R   G +     K V + + 
Sbjct: 181 STSPTLKRQKSFRKEPEKPVISRSLRSPSPSRRFNVSEKNR---GTVMANPPKIVSNIRP 240

Query: 241 RSP--------AKGC--EMRKEKITCIHRISSKIDEAAAREAVLNEGDLDSAAAMEDIDN 275
            SP        A+ C     +E  T IHRISSKIDE A REA+ ++  ++S    EDIDN
Sbjct: 241 ASPNNNPSGLMARPCLKSPARETQTRIHRISSKIDEVAVREALAHDHYMESVP--EDIDN 295

The following BLAST results are available for this feature:

BLAST of CmaCh15G006440.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh15G006440.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIF4_CUCSA	1.6e-76	68.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G354870 PE=4 SV=1	[more]
M5XHQ0_PRUPE	1.5e-34	43.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021954mg PE=4 SV=1	[more]
A0A067K9I2_JATCU	4.4e-31	40.82	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12183 PE=4 SV=1	[more]
A9PBA8_POPTR	1.9e-29	40.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s07680g PE=2 SV=1	[more]
B9S2R2_RICCO	2.1e-28	38.62	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0560750 PE=4 SV=1	[more]

BLAST of CmaCh15G006440.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21510.1	7.5e-14	30.06	unknown protein	[more]

BLAST of CmaCh15G006440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081967\|ref\|XP_008441600.1\|	2.4e-78	68.42	PREDICTED: serine/threonine-protein kinase WNK4 [Cucumis melo]	[more]
gi\|778715012\|ref\|XP_011657327.1\|	2.2e-76	68.20	PREDICTED: putative protein TPRXL [Cucumis sativus]	[more]
gi\|645226748\|ref\|XP_008220186.1\|	1.6e-34	44.41	PREDICTED: putative protein TPRXL [Prunus mume]	[more]
gi\|596239463\|ref\|XP_007224443.1\|	2.1e-34	43.59	hypothetical protein PRUPE_ppa021954mg [Prunus persica]	[more]
gi\|470109729\|ref\|XP_004291143.1\|	7.5e-32	42.12	PREDICTED: protein AF-9 [Fragaria vesca subsp. vesca]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh15G006440	CmaCh15G006440	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh15G006440.1	CmaCh15G006440.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh15G006440.1.CDS.1	CmaCh15G006440.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh15G006440.1.exon.1	CmaCh15G006440.1.exon.1	exon