CmaCh14G020400.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTGGTGATTGTTTATGCACTATGGAATTATAAGCATTGGTCCTTTGTTCTTTAGCATCTTAAGAGAGCTTACTTTTCCCACTTACTACCAGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAATGCCTTTTGCGCTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTAGCAATTTGAATTTCATTATTTTTTCTGCCATCTCATTACCATGTATTGCGGAAATTGTGTAATTGTATTTTTGAAAGCCAATATTAAGCTATTCCCTGATTATTGAATCTGAACTTTACACAATATTCTATGAAGCGAGTAAGGATTTCACCTTGAATATTAGCAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGAAAATAAAGAAAGACACTTCTAGATGGTATAAATAGTGTAAATTTAAATATTGTCAATCACATCTTCTTCACATGCATATAGAGTAGCATGCAACTGATATGAGACGTGGACATGACGGAACAAAGAAATAATGGCATGTAACTATTTAGAAAAAAATTTAAGATATGGTCCTGCTGTGATACTTAAAATATCGATACTTTATATTTTATATAAATCTATTCATTTCATGTGCTCAGAAGATTTTCATTCGAAGGACAAGATCCCGATTTTGGGTAGAGTAGGTATATAAGATTCGAGTCTAGCTCAGATTGGTCTAATAACATAAAATAGCCTCATTTTTTAGAATTCAATAAAACTGACCCAAAGTGCTCAGTAGCGTCTGGCTGCTAAAAAAAAGAGGAGAAGATTGGCCATTTGTTGAGGCAATAAGACGTGGTTAAGATGTATTTGGGTTTTTTAGATATGTTGGACTCGAATTCAAGGCGTGTCTGTTTGCCCTAGATATTGGACAGATTTGGAGGAGCATTCATGCTTCATAAGAGATAGTGGAGTGGTGTTAAAACTTATTTTAGCGAGCAAAAAAAAAAAAACGAGCCATTCTTAAAGAATATGAAAACATGCTGTCCCACAATAATAATATGAGGAAAAGAGTATGGAACACTTTCTAATGGAATTTTATTTTCAATAGTATGGTTCACTGGGACAATTCGACGTGCTTTATTTGGCTTGCAGATCAGTCAGAGTCAATATTTCTCTATGCTAGATTGTGAAATGAATATTAGTATTTTGTGTGATATTATTTATATTAACATGACAAATACTAGGAGAAGATGTACGTTACTATTTCATTGAAGACGCCAAGGAAGAAACTGAAAGAATTTTATGGAAAGCAAGAAGGCAGAAAAAAAAATATGGCAATCCTATAATTATTAATTGAAGGTACAATTCTGCTCATTAACTATCAATGCTTTATATGTTCAGAAAGAATAGATTGAAAGAATAGATTCAAGATGTTAAAAATGAGACTTGCATTGGTAGGATTTCCAGGAATCTTTACACCACATTCTATTGATGGAGGAAACTTTCGTTCTTCCTATTTTTCTATTTGTATCATGGAGATGTCGATAGATAATACATTTATAGCTTGCAAGATTCCTTTTTGGTGCACCACTTGAAATTTTGTCTTGTAGTCGTCTATCTCATATGTATGGAAATATTCTCTGGTACTTTCAAATTGCATCTATCCAGGCCGTAGTTTGCCCTTACAGAAGAGATTGACCTTTGAGAAGTGCATTTCAGCCTACACAAAATTTATGCACTTTTTGTCTGGAGGAAAGAAATTAGATTATAATAACTGTTGCCTGAAGAAGAAGACTGCCGGTGTAGGAACCAAGGCCTTTTAGACGTGAGAAAGAAAAGAGCTAGTATCCTATCCTTGTTGCATTCGGGGTTAAACTAAATTCTAAAAACTCATGCATTCTTACCTCAGTCTTTTCCTAACGCCTGTACATCCAAGAAAGTAAGTATGATCTCAAAATTTGAAGTCCAGATATCGTACTTAATGAAAGATTTATGAACCGATCAGCTTTAATAGGACATGGCCTTCTTGTTGTCCTTGAATAATAACTATTTATTACATTCGAAAACCACTCTGCCAAGATGGCAGGAAAAAGATAGTATTAGTCTTAATTTTTCAATGCCAAAAGACCCTATCATGAATGAAGGCTCAAAACAAACCTCTATTCTGTACGCCAGATCATATCATAATGATCTTTGATTCCAGACAATATCTTGAAATTAGACATCGCCATGGTGAGAAATGATTGAAGTGTTTTTGTTATAGAATCGCTTGGGGAAGGAATGTTCCTTTATTTCACCAGTTTATGGTTAAAGAAGATTTTATCTCATGTTATACATGCCTGTATGTTCTTTACCTCATGCCAAAATTTGTATCATAATCAACTACCTTAGATGCATAATATATATATCACAAGTTTATAACTTCTATCTATTAACCTAGTTCTAGAATTACGATGGATCCTTTTATCAAATCTAAGAAAGTGAATGCGAAATCATTGAACAGCTGTATTTTTTTTTTTTTCGTACTCTTCTTTTGCAGGTGCAAGATGGGTCAGCACGATCAGGATGTAAAAACGCCTTTCTTCTAGGTAATTGGATCCTTATCTTGCTGTTGAATGCCCACTTTCGCATGCTGTCCATTATGGTTTTCTGAGCCTTATTTCTTTTCGTACAACCTCCTTTTTCTTTTCCACTGCACAAATATCCCTCCAAATCTTTTCTTCTTTTCCCTTCCCCCTCCCACTTTGGAATCTGGACCACTAACACTCCCTTTCACACAAAAGATGAGCATAACTCTAACTTTCCCCTGTCACAAAAACTTTTTTCTTGTGTTCGGGAAGGCTCTTTAGTAGGACATTAAAATAATTCTGAGCCATATTCCCATTTAGCTTTTCTTTGAAACGAAGCAAAGCCGTAGATATTTTAGTTCCTCTTAGCAATGGGGTAGTGGGGTTTGAATGATGAAGCCCATTACCAACTTTTTAGTGAGTGTGGGAAGTCCATGCCTATTAAAAGGAGAGGTGTACACTACCGAGTGGTTTAGCTGAATTTAACAACAAAGCCCACAAACTGGATATTGTTGTCTGCCAAGTCCAACCAAGTCCCACATGGATGTTCTGTTTTATCAATACCCTGTTTTCTGGACAATAAAGGTTCATGATTTGGAAATCACGGGTTATTTTACAACTCAAACTTCCCTTTTTTTTGTCCATATTCAAGTTTTAGTTTAGGTAGAGCCGGAAATTGTGACTCTAACATGGTAGTATACGGTTGAGAAAAATATAGGGCATCGAATACATGCACTCATGAGCATGATTTGAGCCATGTGATATTAAGTAAAGTCGGGGAGCGGCATGTCCGTTGCTTAACTTTTTTTATAAAAAAGGAAAAACAATCTAACTTTCTATTAAAATATATCATTTTCTGCTCGAGTGGAGCGGGTTTTCCCCTTCCTCCGAAGTCCAAACCTTCCGTAGATTCCATAGATTTCTGTTATTAAAATAAACTGTAGTTTTAGTGCATGTTTATTTAAATCAAAATCAGTATGATGCATATCTTTCATGCAAAAGTAATTTATTTGTTTAATTTTACATTTTTAAGTACAAATTTCATAAACTAAAATTGATTTTTTAAGTATTAATACCATGTTATATAATAATTTTGAACTTTTCAAATTCAAAATCAGTAAGTTATGCTTTGTTTAATATCACTAAATTATACTTTAAATGGTTTTGTTGTTATATTATATATATATATATATCCTATTAATAATGCACTGTTTCATATACCATCAATCTCAACTGTTTTTTGGATTAGGATAATTTTTTTAAAAGCTATTTAATCAACTTTATGTTCTCAATCCTCAAATATGAAAAAGATCAAAGTTATAGTATAATTAATAATATGTTTATCAATTTGTTGATGATATCAACACCCTTTTAGGTTTAACTATAGCCAAAATGTTTGAAATGATATATTTCTATCCCCCCCACATAATAATAATAATAAATGTTTTGCAGTGAAATGAGGAAATAAAATTCAATAATTTAGATTGGTTCAGGAAGGAAATTTAATTTCCTTTCACATGTCAATTTCATTTAATTTCATGCTATCTTAGGCATAAATTATTGTAAGAGGCTGTACTGCTTTAGTAATTGCTTGGTGAGTAAGTTCTATGATAAATAAATAGGAACTGCATCGTGGCAAGTCTTATTCAATAATTAACACTCTTATTTAACCATTAAAAGATGTGTATTTTGAGAGCTTTTTAGAATTTAAAATTCAATTAAAAGACCTTTACAAGTACAAAAAAAGAAAAAAAAAAAAAAAGATGGGGATCATCTTTAATTGAGTGGGTAGTTACAAGATCTTATTTTAGATAAATTAGAAAATGAATTAAAAAATTCATGGTTTTTATTATTGGTGTCCTAGGTTTTAGGATTTTGAAACATTTATCTAGGAATATTATTCAAAATTTTCACACTAAGCTCCTCGTTGACATGCTTTACTTTTGTGACATTTTCAGTTTTTAGCCCCACTTTTGCACTAATAAGAAAAGAAAGAAAGGACAAAGTTGTCCAAACGCTTTACTGCGTTTATATTGACAGCTTTATTGTATTTTCTGACCTTCATGAAAATATTTGTCTCGGTTTAATCAAGGACCAAGAAAGAAAGGGAACCAAGTCCAAATTAGTTAATCCTCCTCTTTCTTCTATGAGAATCCAAACTATCCCCATAAATATTATCTATTCAAACTCCACTTGAAACCGTGTGAAGAAGATTCTCCATAAATTTTTATTTAGGGCACAAATGATTAGCTTAGTACAATATTTGGTAATTAGAATTGATTTTTATTTATTTATTTATTTATTTATTATTATTATTATTTTCCCCTCTGTTTGCTTTATCTTTTTTTCCTTTCTTGATGCATATGTTGTCTTATTAGGGGAATTCTCGTAAAGTAGGATTGAGATGATTGGACAAACTTCTTTCACATTCCTAATTTTCTTTATTAGGTGATGCCTACCATGAATCATTCAACCAATCTGATGCCTACCCATTAGCCACCTTATAATTTTTCTAATCATCAAACCTGAAAGCTAATCTCTAGAATCATGCCTTTCTTTCATCTTTTTTTAAAAAATATTAAAATGAGAGAAGTCTTTTTAAGTAGCAAAAGAGATAATAAATTGAATTGGATTGGATTGTTGTGTTTTATTTGCTAAATTGAAAACGTTATTCAATTTTTTAATTGAAACTTCTAAGTAGTCATTTGTAGCCTACCTAATAATTTTGATATAAATAATGTTAAGTTGACTTAGTACAAAAATTATTAGAAACCTTTTGTTTAAATAGTTTTTTAGAAAATTCATTAACTACTAAAGACCTCGGAACTTTTGTCACATTTCAAACCTTGGTTAGAGTTGAAGCATTAGAAGGAGATTGGCAATTGATAGAGAATTAAGATTAGGGTTTGTGATGTCTCACGTTGTTGGTTGGGGAGGAGAACAAAACATCATTTATAAGAGTGTGGAAACCTTCACTGAAGCATGGAGAGGAAGCTCGAAAGGAAAAGCTTAAATAGGACAATATTTGCTAGTCGTAGATCTGGGGTGTTACAAGTTATATAGAGATGGAAATGGTTGATCAAACACTTTTAGAACAAGCCTTTCATTAGGGGTTAAATCTTCCTTTTAACTAGAACGAAAGAACAGAAATTGGTGAGGCGTCTAATTGTGGGGCTTTTATGTATCCATAGCGTATGATAAGGAAATTTAACATTAGACAGGAAGTCTTCCCCTAGTTGACTAAACCCACAATCATCACTACATAATAGAGTGGAGTCCTATTCTTCTTGTTTTCTTGTTTTCTTGTTTTCTCTTTTGTATAAATAACCTTTTTATTGTCTTCTTTCTATTGATAGGTTGCGGCTAATATCAAAATCACTTCACTAATGGGGAACCCGATGCCTTGACGCAAGTGCCTACCCACCCACCTCACATCAAAAAGGTTAGGCTTCCTCGCTTGTATTCATCATATAAGCTTCATCATTATTCTCTGCTTCTGTCTGCATTTTCTCAATGGA ATGTTCTGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAATGCCTTTTGCGCTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGAGAAGATGTGCAAGATGGGTCAGCACGATCAGGATGTAAAAACGCCTTTCTTCTAGGTTGCGGCTAATATCAAAATCACTTCACTAATGGGGAACCCGATGCCTTGACGCAAGTGCCTACCCACCCACCTCACATCAAAAAGGTTAGGCTTCCTCGCTTGTATTCATCATATAAGCTTCATCATTATTCTCTGCTTCTGTCTGCATTTTCTCAATGGA ATGTTCTGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAATGCCTTTTGCGCTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGAGAAGATGTGCAAGATGGGTCAGCACGATCAGGATGTAAAAACGCCTTTCTTCTAGGTTGCGGCTAA MFCQPASPNVCIRATAVQSEEVGRWKSVKVENAFCASSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGEDVQDGSARSGCKNAFLLGCG
BLAST of CmaCh14G020400.1 vs. TrEMBL
Match: A0A0A0L487_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122370 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.6e-29 Identity = 69/83 (83.13%), Postives = 73/83 (87.95%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. TrEMBL
Match: A9P914_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16140g PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07 Identity = 34/79 (43.04%), Postives = 45/79 (56.96%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. NCBI nr
Match: gi|659075258|ref|XP_008438048.1| (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32 Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. NCBI nr
Match: gi|659075256|ref|XP_008438047.1| (PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]) HSP 1 Score: 142.9 bits (359), Expect = 3.3e-31 Identity = 73/88 (82.95%), Postives = 78/88 (88.64%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. NCBI nr
Match: gi|659075251|ref|XP_008438045.1| (PREDICTED: protein PAIR1 isoform X1 [Cucumis melo]) HSP 1 Score: 142.5 bits (358), Expect = 4.2e-31 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. NCBI nr
Match: gi|778677212|ref|XP_011650752.1| (PREDICTED: protein PAIR1 isoform X2 [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 5.5e-31 Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 1
BLAST of CmaCh14G020400.1 vs. NCBI nr
Match: gi|778677209|ref|XP_004134325.2| (PREDICTED: protein PAIR1 isoform X1 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 7.2e-31 Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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