CmaCh14G004540.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G004540.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	WUSCHEL related homeobox 11
Location	Cma_Chr14 : 2171571 .. 2172766 (+)
Sequence length	744

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATCACGGCGATGATCCAAATAGCTCCGAGAGGGCGGAGCCGGTGAGGTCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTCTTGAATCTATTTTCAATAGTGGAATGGTGAATCCACCAAAAGATGAGACTGTCAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTTGGCGACGCCAATGTTTTCTACTGGTTTCAGAATCGCCGCTCCCGGTCTCGCCGCCGCCAGCGTCAGCTTCAGGCTGCCGCCAATCACCAAGCTACCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGTAACGGCGGTCGCTACAATAGTGGTGTTATGAATTTTGCTGGTTCCTCCTCTTACTTCGGAGGTGAGTCGTCGTCGTCCTCCTCCTCTGCTTCTGGTGGCGGTGGCGGCGGCGGTACTAGTGAAAGTGGGTGTTTTTCCATGGTGGGTCATATGGGTTTGTCGGAAATTGATCAGCAGATGGGTGTGGCGCCGTCTTTTTGCCCGCCGGAAACCTTAAACTTGGAGTTTCAATCAGGTATGGTTCCAATGGATTAAAGGTGATAACTTTTTGATGATGTGACTGCTAGTTCTTGAGCTTGAGCTTCGTTCTTTATGTTAGAAATCACCGATCTCTACAACGGTATGATATTGTCCACTTTGAGTATAAGCTCTCGTGACTTTGTTTTGAAGTTCACCAAAAGATCTTCTACCGATAGAGATATATTTCTTACTTATAAACCTATCATCGTCCCTAAATTAGCCAATCTAAGACTCCCTCCTAACCATCCTCAACCTTTGGTTACTCGGTTTTTGATCTGAACAGTTCAAAAATGTGTGTATGTTTTTTTTAATAGGGTTTTTGATGTTTTTTTTTTTTTTTTTGAAGGGTATAATGTTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGGCCAGTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTGCACTCTTTGCAGCATGGTGAAAGCTATTTTCTGGTAATTACTCCTCAATTTCATCGTTTCGTTCGATAATTATTTCGTTCGGGAAGATCAAATTTTATAATGTTGCTTTCCTTTGTTGCTTATGTTCTTGTTAGGGTTGA

mRNA sequence

ATGGAAAATCACGGCGATGATCCAAATAGCTCCGAGAGGGCGGAGCCGGTGAGGTCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTCTTGAATCTATTTTCAATAGTGGAATGGTGAATCCACCAAAAGATGAGACTGTCAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTTGGCGACGCCAATGTTTTCTACTGGTTTCAGAATCGCCGCTCCCGGTCTCGCCGCCGCCAGCGTCAGCTTCAGGCTGCCGCCAATCACCAAGCTACCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGTAACGGCGGTCGCTACAATAGTGGTGTTATGAATTTTGCTGGTTCCTCCTCTTACTTCGGAGGTGAGTCGTCGTCGTCCTCCTCCTCTGCTTCTGGTGGCGGTGGCGGCGGCGGTACTAGTGAAAGTGGGTGTTTTTCCATGGTGGGTCATATGGGTTTGTCGGAAATTGATCAGCAGATGGGTGTGGCGCCGTCTTTTTGCCCGCCGGAAACCTTAAACTTGGAGTTTCAATCAGGGTATAATGTTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGGCCAGTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTGCACTCTTTGCAGCATGGTGAAAGCTATTTTCTGGGTTGA

Coding sequence (CDS)

ATGGAAAATCACGGCGATGATCCAAATAGCTCCGAGAGGGCGGAGCCGGTGAGGTCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTCTTGAATCTATTTTCAATAGTGGAATGGTGAATCCACCAAAAGATGAGACTGTCAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTTGGCGACGCCAATGTTTTCTACTGGTTTCAGAATCGCCGCTCCCGGTCTCGCCGCCGCCAGCGTCAGCTTCAGGCTGCCGCCAATCACCAAGCTACCGGCGGCGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGGTAACGGCGGTCGCTACAATAGTGGTGTTATGAATTTTGCTGGTTCCTCCTCTTACTTCGGAGGTGAGTCGTCGTCGTCCTCCTCCTCTGCTTCTGGTGGCGGTGGCGGCGGCGGTACTAGTGAAAGTGGGTGTTTTTCCATGGTGGGTCATATGGGTTTGTCGGAAATTGATCAGCAGATGGGTGTGGCGCCGTCTTTTTGCCCGCCGGAAACCTTAAACTTGGAGTTTCAATCAGGGTATAATGTTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGGCCAGTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTGCACTCTTTGCAGCATGGTGAAAGCTATTTTCTGGGTTGA

Protein sequence

MENHGDDPNSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSGVMNFAGSSSYFGGESSSSSSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQMGVAPSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYFLG

Homology

[Close]

BLAST of CmaCh14G004540.1 vs. Swiss-Prot
Match: WOX11_ARATH (WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50
Identity = 136/253 (53.75%), Postives = 165/253 (65.22%), Query Frame = 1


Query: 9   NSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYW 68
           + S  AEPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYW
Sbjct: 22  SGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYW 81

Query: 69  FQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSGVMNFAGSSSYFG 128
           FQNRRSRSRRRQRQLQAAA                          ++ + + +GS   FG
Sbjct: 82  FQNRRSRSRRRQRQLQAAA----------AAADATTNTCDQTMMVSNSLPHHSGSDLGFG 141

Query: 129 GESSSS-----SSSASGGGGGGGTSESG---CFSMVGHMGLSEI------DQQMGVAPSF 188
           G S+SS     SSS+S GGG    S SG     +M G M   E       +    V    
Sbjct: 142 GCSTSSNYLFASSSSSYGGGCDNQSNSGMENLLTMSGQMSYHEATHHHYQNHSSNVTSIL 201

Query: 189 CP-PETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGI 247
           CP  +  N ++Q G  + +FINGVPTEV +G +DMKA FG++ VLVHSSG+P+ T+EFG 
Sbjct: 202 CPSDQNSNFQYQQG-AITVFINGVPTEVTRGGIDMKATFGEDLVLVHSSGVPLPTDEFGF 261

[Close]

BLAST of CmaCh14G004540.1 vs. Swiss-Prot
Match: WOX11_ORYSJ (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica GN=WOX11 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 138/263 (52.47%), Postives = 161/263 (61.22%), Query Frame = 1


Query: 4   HGDDPNSSERA-EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGD 63
           H  D +++  A EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGD
Sbjct: 5   HSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGD 64

Query: 64  ANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGG--GGGGGGGGGGNGGRYNSGVMNF 123
           ANVFYWFQNRRSRSRRRQRQLQA A   A     G       GG   G+ G   S +  F
Sbjct: 65  ANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMF 124

Query: 124 A-GSSSYFGGESSSSSSSASGGG--------GGGGTSESGCFSMVGHM---GLSEIDQQM 183
           A G++ Y    SSS  SS    G        GGGG         +G+M   G S      
Sbjct: 125 AHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAA 184

Query: 184 GVAPS-----FCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSG 243
           G          C P T+           +FINGV TEVP+GP+D+++MFGQ+ +LVHS+G
Sbjct: 185 GQHQQQQLYYSCQPATMT----------VFINGVATEVPRGPIDLRSMFGQDVMLVHSTG 244

Query: 244 LPVLTNEFGISLHSLQHGESYFL 247
             +  NE+GI LHSLQ GESYFL
Sbjct: 245 ALLPANEYGILLHSLQMGESYFL 257

[Close]

BLAST of CmaCh14G004540.1 vs. Swiss-Prot
Match: WOX12_ARATH (WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 130/253 (51.38%), Postives = 155/253 (61.26%), Query Frame = 1


Query: 10  SSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWF 69
           SS   EPVR+RW+PKPEQILILESIFNSG VNPPKDETVRIRK+LEKFG+VGDANVFYWF
Sbjct: 11  SSTSTEPVRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWF 70

Query: 70  QNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSGV-MNFAG----SS 129
           QNRRSRSRRR RQL AA    AT  G                  N+ + + F      S+
Sbjct: 71  QNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNNEIDLGFGSCSNLSA 130

Query: 130 SYFGGESSSS-------SSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQ--MGVAPSFC 189
           +YF   SSSS         S+S GG          F M GH       QQ     A S  
Sbjct: 131 NYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHSSNAASVL 190

Query: 190 PP--ETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGI 247
            P  +  N +++    + +FINGVP EV KG +DMK MFG ++VL+HSSGLP+ T+EFG 
Sbjct: 191 NPSDQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSGLPLPTDEFGF 250

[Close]

BLAST of CmaCh14G004540.1 vs. Swiss-Prot
Match: WOX10_ORYSI (WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica GN=WOX10 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.2e-40
Identity = 119/261 (45.59%), Postives = 144/261 (55.17%), Query Frame = 1


Query: 15  EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRS 74
           EP RSRW PKPEQILILESIFNSGMVNP KDET RIR+LLE+FG+V DANVFYWFQNRRS
Sbjct: 38  EPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRS 97

Query: 75  RSRRRQRQLQ---AAANHQATGGGGGGGGGGGGGGGGNGGRYNSGVMNFAGSSSYFGGES 134
           RSRRR RQLQ    AA HQ        G GGGGG                    Y     
Sbjct: 98  RSRRRARQLQQACGAALHQLPSAAAAAGAGGGGG-------------------YYHHHHQ 157

Query: 135 SSSSSSASGGGGGGG----TSESGCFSMVGHMGLSEID-----------QQMGVAP---- 194
            SSS     GGGGGG    T+ +   +  GH    E+D           +QMG+      
Sbjct: 158 PSSSPFLMHGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGG 217

Query: 195 ------SFCPPETLNLEFQSGYNVIIFINGVPTEVPK-GPVDMKAMFGQETVLVHSSGLP 247
                 S+   +   L +Q    + +FINGV  +VP  G +DM   FG++ +LVHSSG  
Sbjct: 218 GDHHYGSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEV 277

[Close]

BLAST of CmaCh14G004540.1 vs. Swiss-Prot
Match: WOX10_ORYSJ (WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica GN=WOX10 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39
Identity = 118/261 (45.21%), Postives = 143/261 (54.79%), Query Frame = 1


Query: 15  EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRS 74
           EP RSRW PKPEQILILESIFNSGMVNP KDET RIR+LLE+FG+V DANVFYWFQNRRS
Sbjct: 38  EPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRS 97

Query: 75  RSRRRQRQLQ---AAANHQATGGGGGGGGGGGGGGGGNGGRYNSGVMNFAGSSSYFGGES 134
           RSRRR RQLQ    AA HQ        G GGGG                     Y     
Sbjct: 98  RSRRRARQLQQACGAALHQLPSAAAAAGAGGGG-------------------DYYHHHHQ 157

Query: 135 SSSSSSASGGGGGGG----TSESGCFSMVGHMGLSEID-----------QQMGVA----- 194
            SSS     GGGGGG    T+ +   +  GH    E+D           +QMG+      
Sbjct: 158 PSSSPFLMHGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGG 217

Query: 195 -----PSFCPPETLNLEFQSGYNVIIFINGVPTEVPK-GPVDMKAMFGQETVLVHSSGLP 247
                 S+   +   L +Q    + +FINGV  +VP  G +DM   FG++ +LVHSSG  
Sbjct: 218 GDHHYSSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEV 277

[Close]

BLAST of CmaCh14G004540.1 vs. TrEMBL
Match: A0A0A0LC01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812740 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.2e-89
Identity = 204/255 (80.00%), Postives = 212/255 (83.14%), Query Frame = 1


Query: 1   MENHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           MENHGDDPNS     ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 1   MENHGDDPNSPNQGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQAAA HQ + G      G    GG NGG  + G
Sbjct: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSTGAIHYDCGNVSSGGYNGG--SGG 120

Query: 121 VMNFAG-SSSYFGGESSSSSSSASGGGG--GGGTSESGCFSMVGHMGLSEIDQQMGV--A 180
           +MNFAG SSSY GG SSSSSSSASG GG   GG+  S  FSM GHMG SE+DQQM V   
Sbjct: 121 IMNFAGVSSSYLGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTST 180

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
           PSFCP ET NLEFQSGY +IIFINGVPTEVPKG VDMKAMFG+ETVLVHSSGLPVLTNEF
Sbjct: 181 PSFCPSETSNLEFQSGY-IIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEF 240

Query: 241 GISLHSLQHGESYFL 247
           GISLH+LQHGESYFL
Sbjct: 241 GISLHTLQHGESYFL 252

[Close]

BLAST of CmaCh14G004540.1 vs. TrEMBL
Match: B9SI52_RICCO (Protein WUSCHEL, putative OS=Ricinus communis GN=RCOM_1320640 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.2e-63
Identity = 154/265 (58.11%), Postives = 181/265 (68.30%), Query Frame = 1


Query: 2   ENHGDDPNSS------ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE 61
           +N G D N+S      ER+EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE
Sbjct: 3   DNQGQDSNNSPRNQGTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE 62

Query: 62  KFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA-----NHQATGGGGGGGGGGGGGGGGNG 121
           KFGSVGDANVFYWFQNRRSRSRRRQRQ+QA       N QA   GG     GG       
Sbjct: 63  KFGSVGDANVFYWFQNRRSRSRRRQRQMQATLAEEQRNQQAQASGGAIQYDGG------- 122

Query: 122 GRYNSGVMNFAGSSSY---------FGGESSSSSSSASGGGGGGGTSESGCFSMVGHMGL 181
              ++  + FA SSS+         F   SS++S      GG  G + +  +S+   MG 
Sbjct: 123 ---STSSLGFANSSSFSAVSVSPPPFVVGSSTTSCGLVACGGEDGVANN-LYSIPNQMGF 182

Query: 182 SEIDQQMGVAPSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHS 241
            E+    G++   CP ET NL +Q+G+ + +FINGVPTEVP+GP+DMKAMFGQ+ VLVHS
Sbjct: 183 QEMGHTSGISSILCPTETSNLNYQTGF-ITVFINGVPTEVPRGPLDMKAMFGQDVVLVHS 242

Query: 242 SGLPVLTNEFGISLHSLQHGESYFL 247
           SG+PV TNEFG  +HSLQHGESYFL
Sbjct: 243 SGMPVPTNEFGFLMHSLQHGESYFL 255

[Close]

BLAST of CmaCh14G004540.1 vs. TrEMBL
Match: A0A061F179_THECC (WUSCHEL related homeobox 11 OS=Theobroma cacao GN=TCM_025805 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 158/255 (61.96%), Postives = 173/255 (67.84%), Query Frame = 1


Query: 1   MENHGDDPNS----SERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           ME+   DPNS    SER+EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 30  MEDQASDPNSPSHGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 89

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQA--AANHQATGGGGGGGGGGGGGGGGNGGRYN 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQA  A +HQ        GG             +
Sbjct: 90  FGSVGDANVFYWFQNRRSRSRRRQRQLQASLAGDHQQRNQAQVPGGA-------IQYENS 149

Query: 121 SGVMNFAGSSSYFGGESSS---SSSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQMGVA 180
           +  M FA   S+     SS    SSS+ G  G  G       SM G MG  EI Q   V 
Sbjct: 150 TAAMGFANCPSFANSSPSSFLVGSSSSCGVMGDDGFEN--LLSMSGQMGFQEIGQSSSVT 209

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
              CP ET NL +QSG+ + +FINGVPTEVP+GP+DMKAMFGQ+ VLVHSSG+PV  NEF
Sbjct: 210 SVLCPSETSNLHYQSGF-ITVFINGVPTEVPRGPLDMKAMFGQDVVLVHSSGVPVPMNEF 269

Query: 241 GISLHSLQHGESYFL 247
           G  L SLQ GESYFL
Sbjct: 270 GFLLQSLQPGESYFL 274

[Close]

BLAST of CmaCh14G004540.1 vs. TrEMBL
Match: B9IPV4_POPTR (Homeobox-leucine zipper transcription factor family protein OS=Populus trichocarpa GN=POPTR_0019s05730g PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.5e-59
Identity = 146/251 (58.17%), Postives = 164/251 (65.34%), Query Frame = 1


Query: 2   ENHGDDPNS-----SERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 61
           +N G D NS     +ER+EPVRSRWTPKPEQILILESIFNSGMVNPPK+ETVRIRKLLEK
Sbjct: 3   DNQGQDHNSQSNHGTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLLEK 62

Query: 62  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 121
           FGSVGDANVFYWFQNRRSRSRRRQRQ+QA+                  GG  NG      
Sbjct: 63  FGSVGDANVFYWFQNRRSRSRRRQRQMQAS------------------GGTSNG------ 122

Query: 122 VMNFAGS-SSYFGGESSSSSSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQMGVAPSFC 181
              FA S SSY  G SSS       G  G        FS    MG  E +Q  GV    C
Sbjct: 123 ---FANSPSSYLVGASSSC------GVVGEDHGVESLFSFSNQMGFQEFEQTSGVTSIVC 182

Query: 182 PPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISL 241
           P ET +L +Q+   + IFINGVPTEVP+ P+D+KAMFGQ+ +LVHSSG+PV TNEFG  +
Sbjct: 183 PSETSSLHYQTAGFITIFINGVPTEVPRVPLDVKAMFGQDVMLVHSSGVPVPTNEFGFLV 220

Query: 242 HSLQHGESYFL 247
             L HGESYFL
Sbjct: 243 QILHHGESYFL 220

[Close]

BLAST of CmaCh14G004540.1 vs. TrEMBL
Match: D7TL39_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01200 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-59
Identity = 147/246 (59.76%), Postives = 166/246 (67.48%), Query Frame = 1


Query: 1   MENHGDDPNSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSV 60
           ME+ G D +  ER EPVRSRWTPKPEQI+ILESIFNSGMVNPPKDETVRIRKLLE +GSV
Sbjct: 1   MEDRGQD-HGLERNEPVRSRWTPKPEQIIILESIFNSGMVNPPKDETVRIRKLLEPYGSV 60

Query: 61  GDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSGVMNF 120
           GDANVFYWFQNRRSRSRRRQRQ+QA+            G  G     G    Y S +M  
Sbjct: 61  GDANVFYWFQNRRSRSRRRQRQIQASL----------AGDRGAQAHAGGAIHYQSNLMP- 120

Query: 121 AGSSSYFGGESSSSSSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQMGVAPSFCPPETL 180
              S++    SS    S+S  GG         FS  G +GL E++   GV  + CP  T 
Sbjct: 121 --PSAFVPSSSSCLVGSSSSCGGMNDDGVDNLFSFSGQVGLQEMENSSGVTSTLCPSNTS 180

Query: 181 NLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQH 240
           NL +QSG  V +FINGVPTEVPKG  DMKAMFGQ+ VLVHSSG+PV  NEFG S+ SLQH
Sbjct: 181 NLHYQSGC-VTVFINGVPTEVPKGSFDMKAMFGQDFVLVHSSGVPVPFNEFGFSMQSLQH 231

Query: 241 GESYFL 247
           GESYFL
Sbjct: 241 GESYFL 231

[Close]

BLAST of CmaCh14G004540.1 vs. TAIR10
Match: AT3G03660.2 (AT3G03660.2 WUSCHEL related homeobox 11)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51
Identity = 140/272 (51.47%), Postives = 169/272 (62.13%), Query Frame = 1


Query: 9   NSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYW 68
           + S  AEPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYW
Sbjct: 22  SGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYW 81

Query: 69  FQNRRSRSRRRQRQLQAAA---------------------NHQATGGGGGGGGGGGG--- 128
           FQNRRSRSRRRQRQLQAAA                     +H  +  G GG         
Sbjct: 82  FQNRRSRSRRRQRQLQAAAAAADATTNTCDQTMMVSNSLPHHSGSDLGFGGCSTSSNYLF 141

Query: 129 GGGGNGGRYNSGVMNFAGSSSYFGGESSSSSSSASGGGGGGGTSESG---CFSMVGHMGL 188
           GG      +  G+ +   S S     SSS+SSS+S GGG    S SG     +M G M  
Sbjct: 142 GGSSQVPSFFLGLSSSPSSCSSSSSTSSSASSSSSYGGGCDNQSNSGMENLLTMSGQMSY 201

Query: 189 SEI------DQQMGVAPSFCP-PETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQ 247
            E       +    V    CP  +  N ++Q G  + +FINGVPTEV +G +DMKA FG+
Sbjct: 202 HEATHHHYQNHSSNVTSILCPSDQNSNFQYQQG-AITVFINGVPTEVTRGGIDMKATFGE 261

[Close]

BLAST of CmaCh14G004540.1 vs. TAIR10
Match: AT5G17810.1 (AT5G17810.1 WUSCHEL related homeobox 12)

HSP 1 Score: 177.6 bits (449), Expect = 9.7e-45
Identity = 130/253 (51.38%), Postives = 155/253 (61.26%), Query Frame = 1


Query: 10  SSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWF 69
           SS   EPVR+RW+PKPEQILILESIFNSG VNPPKDETVRIRK+LEKFG+VGDANVFYWF
Sbjct: 11  SSTSTEPVRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWF 70

Query: 70  QNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSGV-MNFAG----SS 129
           QNRRSRSRRR RQL AA    AT  G                  N+ + + F      S+
Sbjct: 71  QNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSNNEIDLGFGSCSNLSA 130

Query: 130 SYFGGESSSS-------SSSASGGGGGGGTSESGCFSMVGHMGLSEIDQQ--MGVAPSFC 189
           +YF   SSSS         S+S GG          F M GH       QQ     A S  
Sbjct: 131 NYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDHNHQQQHHSSNAASVL 190

Query: 190 PP--ETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGI 247
            P  +  N +++    + +FINGVP EV KG +DMK MFG ++VL+HSSGLP+ T+EFG 
Sbjct: 191 NPSDQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVLLHSSGLPLPTDEFGF 250

[Close]

BLAST of CmaCh14G004540.1 vs. TAIR10
Match: AT2G33880.1 (AT2G33880.1 homeobox-3)

HSP 1 Score: 104.8 bits (260), Expect = 8.0e-23
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 1


Query: 3   NHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFG 62
           +H   P SS    ER+   + RW PKPEQI ILE+IFNSGMVNPP++E  RIR  L+++G
Sbjct: 34  SHRSSPFSSGCEVERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYG 93

Query: 63  SVGDANVFYWFQNRRSRSRRRQRQLQAAANH 90
            VGDANVFYWFQNR+SRS+ + R L   + H
Sbjct: 94  QVGDANVFYWFQNRKSRSKHKLRLLHNHSKH 124

[Close]

BLAST of CmaCh14G004540.1 vs. TAIR10
Match: AT5G45980.1 (AT5G45980.1 WUSCHEL related homeobox 8)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 1


Query: 10  SSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWF 69
           SS+R    + RW PKPEQI ILESIFNSG +NPP++E  RIR  L+++G +GDANVFYWF
Sbjct: 45  SSDRIPDPKPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWF 104

Query: 70  QNRRSRSRRRQR 82
           QNR+SR++ + R
Sbjct: 105 QNRKSRAKHKLR 116

[Close]

BLAST of CmaCh14G004540.1 vs. TAIR10
Match: AT3G18010.1 (AT3G18010.1 WUSCHEL related homeobox 1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 9   NSSERAEPVR--SRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVF 68
           NS  +  PV   SRW P P+Q+ +LE ++  G   P  D   +I   L ++G +   NVF
Sbjct: 63  NSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVF 122

Query: 69  YWFQNRRSRSRRRQRQLQAAANHQAT 93
           YWFQN ++R R+++R+ Q    H+ T
Sbjct: 123 YWFQNHKARERQKRRR-QMETGHEET 147

[Close]

BLAST of CmaCh14G004540.1 vs. NCBI nr
Match: gi|449437944|ref|XP_004136750.1| (PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis sativus])

HSP 1 Score: 335.9 bits (860), Expect = 6.0e-89
Identity = 204/255 (80.00%), Postives = 212/255 (83.14%), Query Frame = 1


Query: 1   MENHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           MENHGDDPNS     ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 1   MENHGDDPNSPNQGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQAAA HQ + G      G    GG NGG  + G
Sbjct: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSTGAIHYDCGNVSSGGYNGG--SGG 120

Query: 121 VMNFAG-SSSYFGGESSSSSSSASGGGG--GGGTSESGCFSMVGHMGLSEIDQQMGV--A 180
           +MNFAG SSSY GG SSSSSSSASG GG   GG+  S  FSM GHMG SE+DQQM V   
Sbjct: 121 IMNFAGVSSSYLGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTST 180

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
           PSFCP ET NLEFQSGY +IIFINGVPTEVPKG VDMKAMFG+ETVLVHSSGLPVLTNEF
Sbjct: 181 PSFCPSETSNLEFQSGY-IIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEF 240

Query: 241 GISLHSLQHGESYFL 247
           GISLH+LQHGESYFL
Sbjct: 241 GISLHTLQHGESYFL 252

[Close]

BLAST of CmaCh14G004540.1 vs. NCBI nr
Match: gi|659084899|ref|XP_008443132.1| (PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.8e-88
Identity = 203/255 (79.61%), Postives = 211/255 (82.75%), Query Frame = 1


Query: 1   MENHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           MENHGDDPNS     ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 1   MENHGDDPNSPNHGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQAAA HQ +        G    GG NGG  + G
Sbjct: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSSSAIHYDCGNVSSGGYNGG--SGG 120

Query: 121 VMNFAG-SSSYFGGESSSSSSSASGGGG--GGGTSESGCFSMVGHMGLSEIDQQMGV--A 180
           +MNFAG SSSY GG SSSSSSSASG GG   GG+  S  FSM GHMG SE+DQQM V   
Sbjct: 121 IMNFAGVSSSYIGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTST 180

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
           PSFCP ET NLEFQSGY +IIFINGVPTEVPKG VDMKAMFG+ETVLVHSSGLPVLTNEF
Sbjct: 181 PSFCPSETSNLEFQSGY-IIIFINGVPTEVPKGAVDMKAMFGEETVLVHSSGLPVLTNEF 240

Query: 241 GISLHSLQHGESYFL 247
           GISLH+LQHGESYFL
Sbjct: 241 GISLHTLQHGESYFL 252

[Close]

BLAST of CmaCh14G004540.1 vs. NCBI nr
Match: gi|778684959|ref|XP_011652132.1| (PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 2.3e-80
Identity = 193/255 (75.69%), Postives = 200/255 (78.43%), Query Frame = 1


Query: 1   MENHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           MENHGDDPNS     ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 1   MENHGDDPNSPNQGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQAAA HQ + G      G    GG NGG  + G
Sbjct: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSTGAIHYDCGNVSSGGYNGG--SGG 120

Query: 121 VMNFAG-SSSYFGGESSSSSSSASGGGG--GGGTSESGCFSMVGHMGLSEIDQQMGV--A 180
           +MNFAG SSSY GG SSSSSSSASG GG   GG+  S  FSM GHMG SE+DQQM V   
Sbjct: 121 IMNFAGVSSSYLGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTST 180

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
           PSFCP ET NLEFQS             EVPKG VDMKAMFG+ETVLVHSSGLPVLTNEF
Sbjct: 181 PSFCPSETSNLEFQS-------------EVPKGAVDMKAMFGEETVLVHSSGLPVLTNEF 240

Query: 241 GISLHSLQHGESYFL 247
           GISLH+LQHGESYFL
Sbjct: 241 GISLHTLQHGESYFL 240

[Close]

BLAST of CmaCh14G004540.1 vs. NCBI nr
Match: gi|659084901|ref|XP_008443133.1| (PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 6.7e-80
Identity = 192/255 (75.29%), Postives = 199/255 (78.04%), Query Frame = 1


Query: 1   MENHGDDPNSS----ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60
           MENHGDDPNS     ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK
Sbjct: 1   MENHGDDPNSPNHGCERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEK 60

Query: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAANHQATGGGGGGGGGGGGGGGGNGGRYNSG 120
           FGSVGDANVFYWFQNRRSRSRRRQRQLQAAA HQ +        G    GG NGG  + G
Sbjct: 61  FGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQGSSSAIHYDCGNVSSGGYNGG--SGG 120

Query: 121 VMNFAG-SSSYFGGESSSSSSSASGGGG--GGGTSESGCFSMVGHMGLSEIDQQMGV--A 180
           +MNFAG SSSY GG SSSSSSSASG GG   GG+  S  FSM GHMG SE+DQQM V   
Sbjct: 121 IMNFAGVSSSYIGGGSSSSSSSASGVGGDCSGGSGGSSGFSMSGHMGFSEVDQQMVVTST 180

Query: 181 PSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEF 240
           PSFCP ET NLEFQS             EVPKG VDMKAMFG+ETVLVHSSGLPVLTNEF
Sbjct: 181 PSFCPSETSNLEFQS-------------EVPKGAVDMKAMFGEETVLVHSSGLPVLTNEF 240

Query: 241 GISLHSLQHGESYFL 247
           GISLH+LQHGESYFL
Sbjct: 241 GISLHTLQHGESYFL 240

[Close]

BLAST of CmaCh14G004540.1 vs. NCBI nr
Match: gi|223534971|gb|EEF36654.1| (Protein WUSCHEL, putative [Ricinus communis])

HSP 1 Score: 249.2 bits (635), Expect = 7.4e-63
Identity = 154/265 (58.11%), Postives = 181/265 (68.30%), Query Frame = 1


Query: 2   ENHGDDPNSS------ERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE 61
           +N G D N+S      ER+EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE
Sbjct: 3   DNQGQDSNNSPRNQGTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE 62

Query: 62  KFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA-----NHQATGGGGGGGGGGGGGGGGNG 121
           KFGSVGDANVFYWFQNRRSRSRRRQRQ+QA       N QA   GG     GG       
Sbjct: 63  KFGSVGDANVFYWFQNRRSRSRRRQRQMQATLAEEQRNQQAQASGGAIQYDGG------- 122

Query: 122 GRYNSGVMNFAGSSSY---------FGGESSSSSSSASGGGGGGGTSESGCFSMVGHMGL 181
              ++  + FA SSS+         F   SS++S      GG  G + +  +S+   MG 
Sbjct: 123 ---STSSLGFANSSSFSAVSVSPPPFVVGSSTTSCGLVACGGEDGVANN-LYSIPNQMGF 182

Query: 182 SEIDQQMGVAPSFCPPETLNLEFQSGYNVIIFINGVPTEVPKGPVDMKAMFGQETVLVHS 241
            E+    G++   CP ET NL +Q+G+ + +FINGVPTEVP+GP+DMKAMFGQ+ VLVHS
Sbjct: 183 QEMGHTSGISSILCPTETSNLNYQTGF-ITVFINGVPTEVPRGPLDMKAMFGQDVVLVHS 242

Query: 242 SGLPVLTNEFGISLHSLQHGESYFL 247
           SG+PV TNEFG  +HSLQHGESYFL
Sbjct: 243 SGMPVPTNEFGFLMHSLQHGESYFL 255

The following BLAST results are available for this feature:

BLAST of CmaCh14G004540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WOX11_ARATH	1.1e-50	53.75	WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2 SV=2	[more]
WOX11_ORYSJ	1.7e-46	52.47	WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica GN=WOX11 PE=2 SV=1	[more]
WOX12_ARATH	1.7e-43	51.38	WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2 SV=1	[more]
WOX10_ORYSI	5.2e-40	45.59	WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica GN=WOX10 PE=3 SV=1	[more]
WOX10_ORYSJ	1.5e-39	45.21	WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica GN=WOX10 PE=2 SV=1	[more]

BLAST of CmaCh14G004540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC01_CUCSA	4.2e-89	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812740 PE=4 SV=1	[more]
B9SI52_RICCO	5.2e-63	58.11	Protein WUSCHEL, putative OS=Ricinus communis GN=RCOM_1320640 PE=4 SV=1	[more]
A0A061F179_THECC	2.0e-62	61.96	WUSCHEL related homeobox 11 OS=Theobroma cacao GN=TCM_025805 PE=4 SV=1	[more]
B9IPV4_POPTR	3.5e-59	58.17	Homeobox-leucine zipper transcription factor family protein OS=Populus trichocar...	[more]
D7TL39_VITVI	5.9e-59	59.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01200 PE=4 SV=...	[more]

BLAST of CmaCh14G004540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03660.2	1.8e-51	51.47	WUSCHEL related homeobox 11	[more]
AT5G17810.1	9.7e-45	51.38	WUSCHEL related homeobox 12	[more]
AT2G33880.1	8.0e-23	57.14	homeobox-3	[more]
AT5G45980.1	2.6e-21	61.11	WUSCHEL related homeobox 8	[more]
AT3G18010.1	1.8e-11	37.21	WUSCHEL related homeobox 1	[more]

BLAST of CmaCh14G004540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437944\|ref\|XP_004136750.1\|	6.0e-89	80.00	PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis sativus]	[more]
gi\|659084899\|ref\|XP_008443132.1\|	1.8e-88	79.61	PREDICTED: WUSCHEL-related homeobox 11 isoform X1 [Cucumis melo]	[more]
gi\|778684959\|ref\|XP_011652132.1\|	2.3e-80	75.69	PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis sativus]	[more]
gi\|659084901\|ref\|XP_008443133.1\|	6.7e-80	75.29	PREDICTED: WUSCHEL-related homeobox 11 isoform X2 [Cucumis melo]	[more]
gi\|223534971\|gb\|EEF36654.1\|	7.4e-63	58.11	Protein WUSCHEL, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR009057	Homeobox-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh14G004540	CmaCh14G004540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004540.1	CmaCh14G004540.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004540.1.exon.1	CmaCh14G004540.1.exon.1	exon
CmaCh14G004540.1.exon.2	CmaCh14G004540.1.exon.2	exon
CmaCh14G004540.1.exon.3	CmaCh14G004540.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh14G004540.1.CDS.1	CmaCh14G004540.1.CDS.1	CDS
CmaCh14G004540.1.CDS.2	CmaCh14G004540.1.CDS.2	CDS
CmaCh14G004540.1.CDS.3	CmaCh14G004540.1.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 18..78 score: 2.2
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 16..83 score: 2.
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 14..79 score: 11
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 16..86 score: 8.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 10..87 score: 3.34
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 179..195 score: 3.6E-45coord: 17..90 score: 3.6
None	No IPR available	PANTHER	PTHR24326:SF202	SUBFAMILY NOT NAMED	coord: 179..195 score: 3.6E-45coord: 17..90 score: 3.6