CmaCh13G010580.1 (mRNA) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G010580.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMADS box transcription factor
LocationCma_Chr13 : 8032668 .. 8037903 (-)
Sequence length1756
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAGGCAAAAGGATACGTCACAGACAAAGGATTAGCCAATGAGAAATCGACAACGAATTAGACGAAACCAAGGTGGTATTACAAAACCACCCATCCGAAAATCTCAGCCCCCATCTGCTTGAATTCGTTCCCTTCTGAATCAGTTTCATATTTTGGGAGGGAGTTGGAGTTGATTTTGGTTTAGGGTTTGTAAATGGGGAGAGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAGGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCATGGTATGTTCTTCCATTGCTCTTCATCAATACCACCCATGTTTCTTCTGCTGCTTATCAACAAAACCCACCACCCAAATTCCATTATCATTGTTATTTTGGATTTTCAGTATTGTAGTCCAATCACTACATTCTCCTTGTCGCGTTTTTTTTTTTCTTTTTCCAACTTTACACTACTTATTATGAGCATAACTCATTGAGATTGGACCCATATCAGATTTCTCTTTTTTAGTGTTGATTGTTGAACAAATGAAGAACAACCCTTGGCCCCCTCCCCCTCTTCTTCTTGCACTAACCAACTGGATCAACTTCAATTACTCTACAAATTTACTATTTAATCAACCATTTCAATCCATCCTAAATATTTGTATTTTTCTCGACATTACCGTACTTTATTTTTATAGTTCCAATATGGAGTAGGGATTCAAACTTTGGACTTCGAAAGCAAGATTAATAGACCAGATTTATAGGATTTCATTTACAGCAAACAAAATGCCAAAATCACTTTAATAAAAGTAACTCATTTGTTTGAGAAAAGGAGAGAGTCGCAACAAAGAATTGAGTATATAGTTAGAATGGGGTGTTGATATTGGATTGGCATTATTATTGTGTGTATAATGAATGAGTGTAGCTTTGATGAGCAGCATGGAGAAGATCCTTGAGCGTTATGAAAGGTACTCGTACGCAGAGAGGCGGCTTGTTGCGAATGATAGCCAATCAAACGTACGTACCAAACCCAACCCATCCCGTCCCGTCCCGTCCCATCGAGTTGGTGGTGATTATAATGAAAAAGTTTTGTGTGTTTAGGGAAATTGGACTCTTGAATATGCAAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGTAAAACTTAGCTTCTTCTTCTTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTTCTGGGAATGGTATAAAGTTGGTTGGGATTTGCAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGTCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAGCCAGGAAGGTATGGATATGATTATGTTAGATTGGACTATTGTTCATCATTATACACACTTCATCTTCACAACCTTTTCTTCTACAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGTAAGCTTTCTTGGTTGCCTTTTATACACACTCACATCTCCAAAAATGCAACTCCCACCAAAGATTAATCATTCTATATACCTACATAAACTTGTTCAACTAATCTCAACAAAACCCTTCAACTCTATAAATGTTAAAGATAGGTTTTAAAATGATTTTGAACGTGACAAGAGTAGAGATGTCCATTTAACTTGCGAGACACCCTCTCAAAAGGGGCGAAAAATGAGGGGTGGACGCAACAGGTAAAAATCTCTCCCTAATAACTAAACAGGATCGAGGACAACAATTATATTCTTTGTCTCAGTCCCACCCAACATTTATTTATTTATATATATATATATATATATGCAAAAAAATGAAAAGAAGAAGGAAGATATAGACCGAAACAAGGAAGGAAAACAAGGAAGCATTGTCCGATGGGCATCTGTAACAGTCACAAACACACCCTTAAATCTCTTTACTTGGATTAATCTGATAGACATTTATGGAATAACATTGATGATGGTTAGAAAACTTACAGAATTTACGTAGCAATATCAATTTTGATCTCTAACAACAAGAACAATAACAACAATTTCATTATGGTGGCATGTTTGATCAGGACAAGGCGCTTCAGGACCAAAATAACATGTTAGCCAAGAAGGTGACTCTCTTCTTCTTCTTACCTTCATGTATGCACACACGCACACCATAATGTCCTTACTTAATTTATTTGCTTTCTTTTAATCTGAACAATAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTTCTTCTTCCTCAGCCATTCCAATCTCTTAACATGCCGTTAGTATCTTAATTACAAACATTACATTCATTCAGATTAGGAGTTCATAATAACTGGGTTTGTTTGCTTCCAGTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTAAAATCATATGCCACTACCTAATTTTTTTGCTGTATGAACCCTTTTGGATAATGGATGTTTGTGGAAGTTGTAGCTTTTAGTAAGTAATTTTCAGAAAAGGGTATAATGAGCTAAGAAGCATGGCAGGCTTGTGGGTTCCAAAATGAGACCTTGTTATAGAATAAGGCACACAGTGACATATGACTGTATATAGTTGTGTAAATGGCAGCCACTAACTAACTTTAGTACTCTAATTTACCAACATTTCTCCCCTCTTCTTTCATTTTCTATTTCATAACCTTAGTATTGTTGATACACCCACCGTTAGCATATATTGTCTGTTTTTGTTCGTTACGTATCGACATTAGTCTCACGATTTTAAAACACATATGTTAAGAAGAGGTTTCTATGTCTTTATTATAAGGAATGCTTCGTCCCCCTCCGACCGATATGGGATCTCACAATAGATTGGTATCAAAGCAAACAAAATCTGCTAGCAATAAACTTGGGTTGTTACAAATGATATCAGAACTAAACACCGAGCGGTGTGCCAGCGAGGACGTTGGCCCCCAAGAGAGGTGGATCGTAAGATCCCACGTCGGTTGGAGAGGAGAATTAAGCATTTCTTATAAGACTGTGAAACCTCTCCGACTGACGTTGATACGTAACAAGCCAAAGCAGACAAGTCCGTGTGGCATCAATACTTTTAAACTTGGGTCTATCACTTCTCTATTTTCCTTTTTTTGATCCGACTATAATTAAATATTGTCACGGTTACCATTTAAGTATCCATGCGTCAAATTAAGTTTAACATATCAGCATTAATAAACAACTTAGCTGGAGGGCAAATATCAAACTATATAGTAAAGTTTGTATAAAAATTTGACCATTGTAAATGAAGGTACAAATAATTTTATATTATGAAGCTACATTAAAAACAGAATTAATATTGTCGGTGGGTGACTCAACAGACAACAATAATTAAATCGAAATTTAATGAACCCATTACATCATTTAATATTGCCATTACAGTTCTACAATTTGTCTAAATTTTTTTATGTGGTTCAAATAAGATAACTAATTCATATTTATTTAGCAATATTCTTTCATATTTAATTAAGAGCCAATTAAATGTAAAAATGATTGCATATTTAGAGGATGGATGATAATAATGGCAAAATTTAGAACCAAAACTTAACATAATTGACGGAATGAAGAGATTGAATATGAACAAATAATTGATTGTTCAACGCCATTGGAAAGAGCAGAGTGTTAGGTGGATGAGTCAATCACTCGGACAAGAAGACGACTGGAAAAAGAGAGGAGGCCTCGTGTGAAATAATTCAAACAATTCATATTTCCAATCATATGAAAAGGGAAGCAAAAATTAATGAATAATGAATGTGGCAGCCATTTCTGAAGACTTGGCTACCAAAAATTTATGTTCTGCACGTCTAAGCTGGCTTGGAACAGCCCTACCGTCATTTGACATTCAAACAACAAAACAACTGAATCTTTAATGCATCAAGTTTTGGGTTCCAAATTCCACACTATTAAAGTCAATGCATTGCTGTCCCTATCCACCATTCTTTTTTTTGTATTTATGTTCAAGTTGTTTATATGGTGGGTTTTGAGTTTTGAGTTCAGAAAAATGGTGGGTTTTGAGTTTTAGAGGGAGCTGAAGTTTGTTTGGTCTCTGTTTTCATGGCTTGTTTCTGGGTTTGTTCTAGGCCACAACACAAAAAACCCATCTCAGATTCTGTGGAAAATGTCCAAAAGAAGGAGCTTTTAGGAAGTGTTGTTAGTGGGGAAGAAGAGTTCAGCTCTGATAGCTCCAAAGCTTCGTCTGAAAATGGAAACAGAGTAATGGTGGTTGTGGATTGGAGCGTTGAGGCTGAAGGGGCTTTGGAATGGACACTCTCTCATGCTGTTCGGAGCCATGACACCATTGTTCTTGTTAATGTTCTCAAGAGTTTGAAGCCTCGAGGTGAGAATTTCAGAGATTTGTGTTTCTGGGTTGAGATGGAACATGGAAGTGATTGTTTTTGTTTCTACTTTTTGCAGGTTTTGAGTTTGGGAATAAGGTGAATTCCACAAAGGAGGCCTATAAGCTTCTGTTTTCTATGAGAAACATGTGCTTAAAGAGAAGGCCTGAGGTAACTTCATGTTCATACTATGCTTATAGACATATGCATATCAATATGTATCTAAATGTGTACACCTCAATTGCTTGAGTAGGTGCAAGTAGAGATGGCATTACTAGAAGGGAAAGAAAGAGGTCCAATAATTGTGGAAGAAGCTAAGAAGCATAAACTCTCTCTTTTGGTACTTGGTCAAAGAAAGAGGCCGATCCTTCGGCGTCTATTGAAAAGATGGGCGACAGGACGCTATCGAAGGAGAAGGAAGAAGAAGAGTTGTCGAGCAACGGCGGAGTATTGCATTCAGAACTCCTCTTGCATGACCATTGCAGTGAGGAAGAAGAGCAAAAAGATTGGAGGATATTTGATCACGACCAAACGTCACAAGAACTTCTGGCTCTTGGCTTGATCTTTTTTCTTCTTTTCTTTTCTTTTCTTTGTGTATCATATTCTTTCACCTTCTTAGGTTTATATAAAGGTTCTTAAAAACTGTAGTTTCTGTTCTACAAAGAGTTATAAAAAGAT

mRNA sequence

GACAGGCAAAAGGATACGTCACAGACAAAGGATTAGCCAATGAGAAATCGACAACGAATTAGACGAAACCAAGGTGGTATTACAAAACCACCCATCCGAAAATCTCAGCCCCCATCTGCTTGAATTCGTTCCCTTCTGAATCAGTTTCATATTTTGGGAGGGAGTTGGAGTTGATTTTGGTTTAGGGTTTGTAAATGGGGAGAGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAGGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCATGCATGGAGAAGATCCTTGAGCGTTATGAAAGGTACTCGTACGCAGAGAGGCGGCTTGTTGCGAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCAAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGTCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAGCCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAATAACATGTTAGCCAAGAAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTTCTTCTTCCTCAGCCATTCCAATCTCTTAACATGCCTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGAGGGAGCTGAAGTTTGTTTGGTCTCTGTTTTCATGGCTTGTTTCTGGGTTTGTTCTAGGCCACAACACAAAAAACCCATCTCAGATTCTGTGGAAAATGTCCAAAAGAAGGAGCTTTTAGGAAGTGTTGTTAGTGGGGAAGAAGAGTTCAGCTCTGATAGCTCCAAAGCTTCGTCTGAAAATGGAAACAGAGTAATGGTGGTTGTGGATTGGAGCGTTGAGGCTGAAGGGGCTTTGGAATGGACACTCTCTCATGCTGTTCGGAGCCATGACACCATTGTTCTTGTTAATGTTCTCAAGAGTTTGAAGCCTCGAGGTTTTGAGTTTGGGAATAAGGTGAATTCCACAAAGGAGGCCTATAAGCTTCTGTTTTCTATGAGAAACATGTGCTTAAAGAGAAGGCCTGAGGTGCAAGTAGAGATGGCATTACTAGAAGGGAAAGAAAGAGGTCCAATAATTGTGGAAGAAGCTAAGAAGCATAAACTCTCTCTTTTGGTACTTGGTCAAAGAAAGAGGCCGATCCTTCGGCGTCTATTGAAAAGATGGGCGACAGGACGCTATCGAAGGAGAAGGAAGAAGAAGAGTTGTCGAGCAACGGCGGAGTATTGCATTCAGAACTCCTCTTGCATGACCATTGCAGTGAGGAAGAAGAGCAAAAAGATTGGAGGATATTTGATCACGACCAAACGTCACAAGAACTTCTGGCTCTTGGCTTGATCTTTTTTCTTCTTTTCTTTTCTTTTCTTTGTGTATCATATTCTTTCACCTTCTTAGGTTTATATAAAGGTTCTTAAAAACTGTAGTTTCTGTTCTACAAAGAGTTATAAAAAGAT

Coding sequence (CDS)

ATGGGGAGAGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAGGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCATGCATGGAGAAGATCCTTGAGCGTTATGAAAGGTACTCGTACGCAGAGAGGCGGCTTGTTGCGAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCAAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGTCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAGCCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAATAACATGTTAGCCAAGAAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTTCTTCTTCCTCAGCCATTCCAATCTCTTAACATGCCTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGAGGGAGCTGAAGTTTGTTTGGTCTCTGTTTTCATGGCTTGTTTCTGGGTTTGTTCTAGGCCACAACACAAAAAACCCATCTCAGATTCTGTGGAAAATGTCCAAAAGAAGGAGCTTTTAGGAAGTGTTGTTAGTGGGGAAGAAGAGTTCAGCTCTGATAGCTCCAAAGCTTCGTCTGAAAATGGAAACAGAGTAATGGTGGTTGTGGATTGGAGCGTTGAGGCTGAAGGGGCTTTGGAATGGACACTCTCTCATGCTGTTCGGAGCCATGACACCATTGTTCTTGTTAATGTTCTCAAGAGTTTGAAGCCTCGAGGTTTTGAGTTTGGGAATAAGGTGAATTCCACAAAGGAGGCCTATAAGCTTCTGTTTTCTATGAGAAACATGTGCTTAAAGAGAAGGCCTGAGGTGCAAGTAGAGATGGCATTACTAGAAGGGAAAGAAAGAGGTCCAATAATTGTGGAAGAAGCTAAGAAGCATAAACTCTCTCTTTTGGTACTTGGTCAAAGAAAGAGGCCGATCCTTCGGCGTCTATTGAAAAGATGGGCGACAGGACGCTATCGAAGGAGAAGGAAGAAGAAGAGTTGTCGAGCAACGGCGGAGTATTGCATTCAGAACTCCTCTTGCATGACCATTGCAGTGAGGAAGAAGAGCAAAAAGATTGGAGGATATTTGATCACGACCAAACGTCACAAGAACTTCTGGCTCTTGGCTTGA

Protein sequence

MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQAQNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESAANHDRSGTLLPPWMLGHHLEGAEVCLVSVFMACFWVCSRPQHKKPISDSVENVQKKELLGSVVSGEEEFSSDSSKASSENGNRVMVVVDWSVEAEGALEWTLSHAVRSHDTIVLVNVLKSLKPRGFEFGNKVNSTKEAYKLLFSMRNMCLKRRPEVQVEMALLEGKERGPIIVEEAKKHKLSLLVLGQRKRPILRRLLKRWATGRYRRRRKKKSCRATAEYCIQNSSCMTIAVRKKSKKIGGYLITTKRHKNFWLLA
Homology
[Close]
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80
Identity = 162/248 (65.32%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME++LERYERYS+AER+LV  D  S G+WTLE+AKLKAR+EVLQ+N +H++GEDLESL
Sbjct: 61  SCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           ++KELQN+E QLDSALKH+R+RKNQLMHESIS LQK+D+ALQ+QNN L+KK++E+EK  A
Sbjct: 121 NMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVA 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYPT-------HATGHEESAANHDRSGTL 240
           Q  Q +QQ +H I  S  +LPQ   S ++   Y            G   S      + T+
Sbjct: 181 QQNQWDQQ-NHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQGAANNTV 240

Query: 241 LPPWMLGH 242
           +P WML H
Sbjct: 241 MPQWMLRH 247

[Close]
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.9e-76
Identity = 158/248 (63.71%), Postives = 189/248 (76.21%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+TD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME++LERYERYS+AE++LV  D  S G+WTLE AKLKAR+EVLQ+N + ++GEDLESL
Sbjct: 61  SCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           ++KELQN+E QL SALKH+R+RKNQLMHESIS LQK+D+ALQ+QNN L+KK++E+EK   
Sbjct: 121 NMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVE 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQ-------SLNMPCPYPTHATGHEESAANHDRSGTL 240
           Q  Q +QQ +H I  S  +LPQ          S N          G   S      + T+
Sbjct: 181 QQNQWDQQ-NHEINSSTFVLPQQLDSPHLGEASQNTNVVDNGEVEGGNSSQXQGAANNTV 240

Query: 241 LPPWMLGH 242
           +P WM+ H
Sbjct: 241 MPQWMVRH 247

[Close]
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.3e-75
Identity = 147/217 (67.74%), Postives = 187/217 (86.18%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEK-AQ 180
           S KELQN+EQQLD+ALKH+R+RKNQLMH+SI++LQ+K+KA+Q+QN+ML+K+I+E+EK  +
Sbjct: 121 SSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILR 180

Query: 181 AQNPQMEQQ-HSHAI--EPSPLLLPQPFQSLNMPCPY 214
           AQ  Q +QQ H H +   P P  +  P+   + P P+
Sbjct: 181 AQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPF 217

[Close]
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 4.8e-74
Identity = 147/219 (67.12%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEK-AQ 180
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQKK+KA+Q+QN+ML+K+I+E+EK  +
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180

Query: 181 AQNPQMEQQHSHAIEPSPL-----LLPQPFQSLNMPCPY 214
           AQ  Q +QQ+     P PL      +  P+   + P P+
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPF 219

[Close]
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match: AP1_ARALL (Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata GN=AP1 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.3e-74
Identity = 147/219 (67.12%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL ++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLNAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEK-AQ 180
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQ+K+KA+Q+QN+ML+K+I+E+EK  +
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQIKEREKILR 180

Query: 181 AQNPQMEQQ-HSHAIEPSP----LLLPQPFQSLNMPCPY 214
           AQ  Q +QQ H H + P P      +  P+   + P P+
Sbjct: 181 AQQEQWDQQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPF 219

[Close]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match: A0A0A0LQN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039920 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.9e-93
Identity = 188/233 (80.69%), Postives = 208/233 (89.27%), Query Frame = 1 

Query: 255 MACFWVCSRPQHKKPISDSVENVQKKELLGSVVSGEEEFSSDSSK-ASSENGNRVMVVVD 314
           MACF +CS+ Q + PISDSVENVQK+ELLGS VSGEE+FSSD+SK A  +NGNRVMVVVD
Sbjct: 1   MACFLLCSKSQQEIPISDSVENVQKRELLGSSVSGEEDFSSDNSKVALCQNGNRVMVVVD 60

Query: 315 WSVEAEGALEWTLSHAVRSHDTIVLVNVLKSLKPR-----GFEFGNKVNSTKEAYKLLFS 374
           WSVEA+ ALEWTLSHAV+ +DTIVLV+VLKSLK +     GFEFGNKVN  K A+KLLFS
Sbjct: 61  WSVEAKEALEWTLSHAVQKNDTIVLVHVLKSLKLQRESFIGFEFGNKVNYIK-AHKLLFS 120

Query: 375 MRNMCLKRRPEVQVEMALLEGKERGPIIVEEAKKHKLSLLVLGQRKRPILRRLLKRWATG 434
           MR+MCLK +PEVQVE+ALLEGKERGPIIVEEAKKHKLSLLVLGQRKRP+LRRLL RWA  
Sbjct: 121 MRSMCLKTKPEVQVEVALLEGKERGPIIVEEAKKHKLSLLVLGQRKRPLLRRLLNRWAKR 180

Query: 435 RYRRRRKKKSCRATAEYCIQNSSCMTIAVRKKSKKIGGYLITTKRHKNFWLLA 482
           R RRR+KKK+CRATAEYCIQNSSCMTIAVRKKSK+IGGYLITTK HKNFWLLA
Sbjct: 181 RSRRRKKKKTCRATAEYCIQNSSCMTIAVRKKSKRIGGYLITTKSHKNFWLLA 232

[Close]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match: B9RLK4_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 5.5e-93
Identity = 180/245 (73.47%), Postives = 217/245 (88.57%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L+A D+++NG+WTLE+AKLKAR+EVLQ+N RHFMGE+L++L
Sbjct: 61  SCMERILERYERYSYAERQLLATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEELDTL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           +LK+LQN+EQQ+DSALKHVR+RKNQLM+ESIS+LQKKDKALQ+QNN LAKK++EKEKA+A
Sbjct: 121 TLKDLQNLEQQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNQLAKKVKEKEKAKA 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYPTH-ATGHEESAANHDRSGTLLPPWML 240
           Q  Q EQQ +  ++ SP+LLPQP QS+N+   +P   +TG +E+   H+R+  LLP WML
Sbjct: 181 QQTQWEQQ-NQGVDSSPVLLPQPIQSMNIRSTHPARGSTGEDETTPIHNRANALLPAWML 240

Query: 241 GHHLE 245
            H  E
Sbjct: 241 THFNE 244

[Close]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match: A0A067KHQ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11755 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.6e-92
Identity = 182/243 (74.90%), Postives = 210/243 (86.42%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+LVA D+++NG+WTLE+AKLKAR+EVLQ+N RHFMGEDL+SL
Sbjct: 61  SCMERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SLKELQN+EQQ+DSALKH+R+RKNQ M+ESIS+LQKKDKALQ+QNN LAKKI+EKEKA A
Sbjct: 121 SLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQLAKKIKEKEKAMA 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYPTHA-TGHEESAANHDR-SGTLLPPWM 240
           Q   +EQQ + A+  SP+L+PQ  QS N+   Y      G +E++  H R +G LLP WM
Sbjct: 181 QQTNLEQQQNQAVNSSPVLIPQSMQSFNLSSSYSARGIRGEDETSQIHHRANGGLLPAWM 240

Query: 241 LGH 242
           L H
Sbjct: 241 LPH 243

[Close]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match: Q39401_BETPN (MADS5 protein OS=Betula pendula GN=MADS5 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.4e-90
Identity = 180/242 (74.38%), Postives = 206/242 (85.12%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYA+R+L+AND + NG+WTLE+AKLKARIEVLQ+N +HF+GEDL+SL
Sbjct: 61  SCMERILERYERYSYADRQLLANDLEQNGSWTLEHAKLKARIEVLQRNQKHFVGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SLKELQN+EQQLDSALKH+R+RKNQLM+ESIS+LQ+KDKALQ+QNN+LAKK++EKEK  A
Sbjct: 121 SLKELQNLEQQLDSALKHIRSRKNQLMYESISELQRKDKALQEQNNVLAKKVKEKEKELA 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQ-SLNMPCPYPTHATGHEESAANHDRSGTLLPPWML 240
           Q  Q EQQ SH ++  P LLPQP Q SLN+         G  +      R+  LLPPWML
Sbjct: 181 QQAQWEQQ-SHTLDSVPSLLPQPLQSSLNIGGSQQARGNGRVDEGTPPHRANALLPPWML 240

Query: 241 GH 242
            H
Sbjct: 241 RH 241

[Close]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match: A0A0D2QII7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.0e-87
Identity = 175/245 (71.43%), Postives = 205/245 (83.67%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSSD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L AN+++  G+WTLE+AKLKAR+EVLQ+N RH+MGEDLE+L
Sbjct: 61  SCMERILERYERYSYAERQLAANENERTGSWTLEHAKLKARMEVLQRNQRHYMGEDLENL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SL+ELQN+E QLDSALKH+R+RKNQLM ESIS+LQKKDKALQ+QNN+LAKK++EKEK + 
Sbjct: 121 SLRELQNLEHQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNVLAKKVKEKEKEKE 180

Query: 181 QNPQMEQQH---SHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEE---SAANHDRSGTLL 240
           +  + E  H    +  + S  +LPQP QSLN+   Y   + G EE   SAA H  S  LL
Sbjct: 181 KEKEKEMTHQPQQNNCQDSSSMLPQPLQSLNISDTYEARSNGREEGNPSAAQHRNSNVLL 240

[Close]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match: AT1G69120.1 (AT1G69120.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.7e-75
Identity = 147/219 (67.12%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEK-AQ 180
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQKK+KA+Q+QN+ML+K+I+E+EK  +
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180

Query: 181 AQNPQMEQQHSHAIEPSPL-----LLPQPFQSLNMPCPY 214
           AQ  Q +QQ+     P PL      +  P+   + P P+
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPF 219

[Close]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match: AT5G60910.1 (AT5G60910.1 AGAMOUS-like 8)

HSP 1 Score: 275.0 bits (702), Expect = 8.7e-74
Identity = 154/239 (64.44%), Postives = 183/239 (76.57%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFS+KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERY+RY Y++++LV  D   + NW LE+AKLKAR+EVL+KN R+FMGEDL+SL
Sbjct: 61  SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SLKELQ++E QLD+A+K +R+RKNQ M ESIS LQKKDKALQD NN L KKI+E+EK   
Sbjct: 121 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK--- 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESAANHDRSGTLLPPWML 240
           +  Q E Q       S +LLPQ +   +    +     G    A++     +LLP WML
Sbjct: 181 KTGQQEGQLVQCSNSSSVLLPQ-YCVTSSRDGFVERVGGENGGASSLTEPNSLLPAWML 235

[Close]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match: AT1G26310.1 (AT1G26310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-68
Identity = 133/207 (64.25%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRV+LKRIENKIN QVTFSKRR+GLLKKA EISVLCDAEV+LIVFS KGKLFEYS++
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNG--NWTLEYAKLKARIEVLQKNHRHFMGEDLE 120
           SCMEK+LERYERYSYAER+L+A DS  N   NW++EY++LKA+IE+L++N RH++GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 SLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKA 180
            +SLK+LQN+EQQL++ALKH+R+RKNQLM+ES++ LQ+K+K +Q++N+ML K+I+E+E  
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

Query: 181 QAQNPQMEQQHSHAIEPSPLLLPQPFQ 206
                   +Q + +++  P   PQPFQ
Sbjct: 181 LRTKQTQCEQLNRSVDDVP--QPQPFQ 205

[Close]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match: AT3G30260.1 (AT3G30260.1 AGAMOUS-like 79)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-50
Identity = 124/246 (50.41%), Postives = 158/246 (64.23%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQL+RIENKI  QVTFSKRR+GL+KKA EISVLCDAEVALIVFS KGKLFEYS  
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           S ME+IL+RYER +YA + +   +  S G  + E +KL   I+VLQ++ RH  GE+++ L
Sbjct: 61  SSMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           S+++LQ +E QLD+ALK  R+RKNQLM ESI+ LQKK+K L++    L KK  E+E  Q 
Sbjct: 121 SIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDFQT 180

Query: 181 QNPQMEQQHSHAIEPSPLLLPQPFQSLNMPCPYP------THATGHEESAANH--DRSGT 239
           QN   +     ++   P   P   +    P P P      +   G  E AA     R+  
Sbjct: 181 QNLSHDLA---SLATPPFESPHELRRTISPPPPPLSSGDTSQRDGVGEVAAGTLIRRTNA 240

[Close]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-42
Identity = 94/172 (54.65%), Postives = 125/172 (72.67%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRV+LKRIENKIN QVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           S M K L+RY++ SY    +    ++   N   EY KLK R E LQ+  R+ +GEDL  L
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKI 173
           + KEL+ +E+QLD +LK VR+ K Q M + +SDLQ K++ L + N  LA K+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172

[Close]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match: gi|659066635|ref|XP_008453689.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 211/246 (85.77%), Postives = 223/246 (90.65%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAERRLVANDSQSNGNWTLE+AKLKARIEVLQKNHRHFMGEDL+SL
Sbjct: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEHAKLKARIEVLQKNHRHFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SLKELQNIEQQLDSALKH+RARKNQLMHESI++LQKK K LQ+ NNML KKI+EKEK++A
Sbjct: 121 SLKELQNIEQQLDSALKHIRARKNQLMHESITELQKKGKVLQEHNNMLGKKIKEKEKSRA 180

Query: 181 QNPQMEQQH---SHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESAANHDRSGTLLPPW 240
            NP MEQQ    S+AIE SPLLLPQPFQSL+M CPY TH     +S  NHDRS TLLPPW
Sbjct: 181 HNPLMEQQQQQDSNAIESSPLLLPQPFQSLSMSCPYTTHVPEENDSTVNHDRSDTLLPPW 240

Query: 241 MLGHHL 244
           ML HHL
Sbjct: 241 MLRHHL 246

[Close]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match: gi|778657141|ref|XP_011650331.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 209/246 (84.96%), Postives = 224/246 (91.06%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKI  QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKIIRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAERRLVANDSQ NGNWTLE+AKLKARIEVLQKNHRHFMGEDL+SL
Sbjct: 61  SCMEKILERYERYSYAERRLVANDSQPNGNWTLEHAKLKARIEVLQKNHRHFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQA 180
           SLKELQNIEQQLDSALKH+RARKNQLMHESI++L+KK K LQ+ NN+L KKI+EKEK++A
Sbjct: 121 SLKELQNIEQQLDSALKHIRARKNQLMHESITELKKKGKVLQEHNNILGKKIKEKEKSRA 180

Query: 181 QNPQMEQ---QHSHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESAANHDRSGTLLPPW 240
            NPQMEQ   Q+S+ IE SPLLLPQPFQSL+M CPYPTH     ESA NH+RS TLLPPW
Sbjct: 181 HNPQMEQQQHQNSNVIESSPLLLPQPFQSLSMSCPYPTHGLEENESAPNHERSDTLLPPW 240

Query: 241 MLGHHL 244
           ML HHL
Sbjct: 241 MLRHHL 246

[Close]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match: gi|659066633|ref|XP_008453619.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis melo])

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 211/259 (81.47%), Postives = 223/259 (86.10%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SC-------------MEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQK 120
           SC             MEKILERYERYSYAERRLVANDSQSNGNWTLE+AKLKARIEVLQK
Sbjct: 61  SCEMNMSQNLNFHFSMEKILERYERYSYAERRLVANDSQSNGNWTLEHAKLKARIEVLQK 120

Query: 121 NHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNM 180
           NHRHFMGEDL+SLSLKELQNIEQQLDSALKH+RARKNQLMHESI++LQKK K LQ+ NNM
Sbjct: 121 NHRHFMGEDLDSLSLKELQNIEQQLDSALKHIRARKNQLMHESITELQKKGKVLQEHNNM 180

Query: 181 LAKKIREKEKAQAQNPQMEQQH---SHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESA 240
           L KKI+EKEK++A NP MEQQ    S+AIE SPLLLPQPFQSL+M CPY TH     +S 
Sbjct: 181 LGKKIKEKEKSRAHNPLMEQQQQQDSNAIESSPLLLPQPFQSLSMSCPYTTHVPEENDST 240

Query: 241 ANHDRSGTLLPPWMLGHHL 244
            NHDRS TLLPPWML HHL
Sbjct: 241 VNHDRSDTLLPPWMLRHHL 259

[Close]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match: gi|449439351|ref|XP_004137449.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105
Identity = 209/259 (80.69%), Postives = 224/259 (86.49%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKI  QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKIIRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SC-------------MEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQK 120
           SC             MEKILERYERYSYAERRLVANDSQ NGNWTLE+AKLKARIEVLQK
Sbjct: 61  SCEMNMSQNLNFHFSMEKILERYERYSYAERRLVANDSQPNGNWTLEHAKLKARIEVLQK 120

Query: 121 NHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNM 180
           NHRHFMGEDL+SLSLKELQNIEQQLDSALKH+RARKNQLMHESI++L+KK K LQ+ NN+
Sbjct: 121 NHRHFMGEDLDSLSLKELQNIEQQLDSALKHIRARKNQLMHESITELKKKGKVLQEHNNI 180

Query: 181 LAKKIREKEKAQAQNPQMEQ---QHSHAIEPSPLLLPQPFQSLNMPCPYPTHATGHEESA 240
           L KKI+EKEK++A NPQMEQ   Q+S+ IE SPLLLPQPFQSL+M CPYPTH     ESA
Sbjct: 181 LGKKIKEKEKSRAHNPQMEQQQHQNSNVIESSPLLLPQPFQSLSMSCPYPTHGLEENESA 240

Query: 241 ANHDRSGTLLPPWMLGHHL 244
            NH+RS TLLPPWML HHL
Sbjct: 241 PNHERSDTLLPPWMLRHHL 259

[Close]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match: gi|449439353|ref|XP_004137450.1| (PREDICTED: uncharacterized protein LOC101207475 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 188/233 (80.69%), Postives = 208/233 (89.27%), Query Frame = 1 

Query: 255 MACFWVCSRPQHKKPISDSVENVQKKELLGSVVSGEEEFSSDSSK-ASSENGNRVMVVVD 314
           MACF +CS+ Q + PISDSVENVQK+ELLGS VSGEE+FSSD+SK A  +NGNRVMVVVD
Sbjct: 1   MACFLLCSKSQQEIPISDSVENVQKRELLGSSVSGEEDFSSDNSKVALCQNGNRVMVVVD 60

Query: 315 WSVEAEGALEWTLSHAVRSHDTIVLVNVLKSLKPR-----GFEFGNKVNSTKEAYKLLFS 374
           WSVEA+ ALEWTLSHAV+ +DTIVLV+VLKSLK +     GFEFGNKVN  K A+KLLFS
Sbjct: 61  WSVEAKEALEWTLSHAVQKNDTIVLVHVLKSLKLQRESFIGFEFGNKVNYIK-AHKLLFS 120

Query: 375 MRNMCLKRRPEVQVEMALLEGKERGPIIVEEAKKHKLSLLVLGQRKRPILRRLLKRWATG 434
           MR+MCLK +PEVQVE+ALLEGKERGPIIVEEAKKHKLSLLVLGQRKRP+LRRLL RWA  
Sbjct: 121 MRSMCLKTKPEVQVEVALLEGKERGPIIVEEAKKHKLSLLVLGQRKRPLLRRLLNRWAKR 180

Query: 435 RYRRRRKKKSCRATAEYCIQNSSCMTIAVRKKSKKIGGYLITTKRHKNFWLLA 482
           R RRR+KKK+CRATAEYCIQNSSCMTIAVRKKSK+IGGYLITTK HKNFWLLA
Sbjct: 181 RSRRRKKKKTCRATAEYCIQNSSCMTIAVRKKSKRIGGYLITTKSHKNFWLLA 232

The following BLAST results are available for this feature:
BLAST of CmaCh13G010580.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL8_SOLTU2.0e-8065.32Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1[more]
AGL8_SOLCO3.9e-7663.71Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 S... [more]
AP1_SINAL4.3e-7567.74Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1[more]
AP1_ARATH4.8e-7467.12Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2[more]
AP1_ARALL6.3e-7467.12Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata GN=AP1 PE=... [more]
BLAST of CmaCh13G010580.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQN9_CUCSA1.9e-9380.69Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039920 PE=4 SV=1[more]
B9RLK4_RICCO5.5e-9373.47Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=4 SV=1[more]
A0A067KHQ8_JATCU3.6e-9274.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11755 PE=4 SV=1[more]
Q39401_BETPN7.4e-9074.38MADS5 protein OS=Betula pendula GN=MADS5 PE=2 SV=1[more]
A0A0D2QII7_GOSRA2.0e-8771.43Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1[more]
BLAST of CmaCh13G010580.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69120.12.7e-7567.12 K-box region and MADS-box transcription factor family protein [more]
AT5G60910.18.7e-7464.44 AGAMOUS-like 8[more]
AT1G26310.11.9e-6864.25 K-box region and MADS-box transcription factor family protein [more]
AT3G30260.11.0e-5050.41 AGAMOUS-like 79[more]
AT5G15800.21.0e-4254.65 K-box region and MADS-box transcription factor family protein [more]
BLAST of CmaCh13G010580.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066635|ref|XP_008453689.1|2.7e-10985.77PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis melo... [more]
gi|778657141|ref|XP_011650331.1|2.3e-10884.96PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sati... [more]
gi|659066633|ref|XP_008453619.1|1.6e-10681.47PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis melo... [more]
gi|449439351|ref|XP_004137449.1|1.4e-10580.69PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sati... [more]
gi|449439353|ref|XP_004137450.1|2.7e-9380.69PREDICTED: uncharacterized protein LOC101207475 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
IPR006016UspA
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006950response to stress
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006950 response to stress
biological_process GO:0010154 fruit development
biological_process GO:0010077 maintenance of inflorescence meristem identity
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh13G010580CmaCh13G010580gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh13G010580.1CmaCh13G010580.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G010580.1.three_prime_UTR.1CmaCh13G010580.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G010580.1.CDS.11CmaCh13G010580.1.CDS.11CDS
CmaCh13G010580.1.CDS.10CmaCh13G010580.1.CDS.10CDS
CmaCh13G010580.1.CDS.9CmaCh13G010580.1.CDS.9CDS
CmaCh13G010580.1.CDS.8CmaCh13G010580.1.CDS.8CDS
CmaCh13G010580.1.CDS.7CmaCh13G010580.1.CDS.7CDS
CmaCh13G010580.1.CDS.6CmaCh13G010580.1.CDS.6CDS
CmaCh13G010580.1.CDS.5CmaCh13G010580.1.CDS.5CDS
CmaCh13G010580.1.CDS.4CmaCh13G010580.1.CDS.4CDS
CmaCh13G010580.1.CDS.3CmaCh13G010580.1.CDS.3CDS
CmaCh13G010580.1.CDS.2CmaCh13G010580.1.CDS.2CDS
CmaCh13G010580.1.CDS.1CmaCh13G010580.1.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G010580.1.five_prime_UTR.1CmaCh13G010580.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G010580.1.exon.11CmaCh13G010580.1.exon.11exon
CmaCh13G010580.1.exon.10CmaCh13G010580.1.exon.10exon
CmaCh13G010580.1.exon.9CmaCh13G010580.1.exon.9exon
CmaCh13G010580.1.exon.8CmaCh13G010580.1.exon.8exon
CmaCh13G010580.1.exon.7CmaCh13G010580.1.exon.7exon
CmaCh13G010580.1.exon.6CmaCh13G010580.1.exon.6exon
CmaCh13G010580.1.exon.5CmaCh13G010580.1.exon.5exon
CmaCh13G010580.1.exon.4CmaCh13G010580.1.exon.4exon
CmaCh13G010580.1.exon.3CmaCh13G010580.1.exon.3exon
CmaCh13G010580.1.exon.2CmaCh13G010580.1.exon.2exon
CmaCh13G010580.1.exon.1CmaCh13G010580.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 1.4E-29coord: 23..38
score: 1.4E-29coord: 38..59
score: 1.4
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 1.6
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 1.2
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 31
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..90
score: 4.45
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 85..172
score: 1.9
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 88..178
score: 17
IPR006016UspAPFAMPF00582Uspcoord: 307..458
score: 1.4
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 306..460
score: 4.9
NoneNo IPR availableunknownCoilCoilcoord: 88..108
score: -coord: 151..188
score: -coord: 122..145
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..364
score: 3.1E
NoneNo IPR availablePANTHERPTHR11945:SF155AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDcoord: 2..364
score: 3.1E
NoneNo IPR availableunknownSSF52402Adenine nucleotide alpha hydrolases-likecoord: 306..459
score: 1.76