CmaCh13G007880.1 (mRNA) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G007880.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
LocationCma_Chr13 : 6747139 .. 6748275 (+)
Sequence length633
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTCACAATGGACATTGGCCCACCACTTTCAACCCAAAAGACTGTTGATGGACCATCTAGCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTCAACATCATCCCTAGCAGTACTGGAGCTGCTAAGGTATTGATCACTGATGAGCTCTACAGCTGACTGATGTTTCGAGTATCTACTTTCTTGGCTTATCTAAGCTCTGATTTGACCATTGTGTTCGTTTAGGCTGTCGTCAAGTTCTCCCTGCATTGAATGGAAAACTGACCGGTATGGCTTTTCGTGTTCCTACCGTTGATGTCTCGGTAGTTGACCTTACAGTGAGGTTGGAGAAGGCAGCATCTTATGAAGATATTAAAGCTGCTATCAAGTAAGGATATAGTTTGCTTCATTCTTACATGTCAGTTAGAGGGGAACAAACATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGTAAGTGTGTTTTAAACCGTAAGGCTGATGGCGATACTGAAATGAACGATTAGTTTTTGAGAAGGGTTATTACATGCTTGGTCTTTTTTGTTTGAAGAGAAGTGTTATCTTCTTTTTGATTCATTTTCTTTGTTGGTTACCAGGGAGGAGTCTGAGGGAAAGTTAAAAGGAATTCTGGGTTACACCGAAGACGAGGTGGTGTCCACTGATTTTATGGGTGACAACAGGTACGGTTTCTACTCACGAACGTACATGAACAAGATCTCTTACGGTCGTCGTACAATTGTATCCTTGAGATTTAAGGAGACGAGATTCGTTAAGAACTCGATCGCTATATTACATAAAAACAAAGTCTATTATTTCTAAGACAAGTTACTCCGCAATCGGACCAGGTCAAGTATTTTCGACGCCAAGGCCGGGATTGCACTGAACAAAAACTACGTGAAGCTCGTGTCGTGGTACGACAACGAGTTAGGCTACAGGTACAAACAAATCCAAAGGCTTTGCATTACTGCAGTAATCCTCCAGTTGCCGCTTTACCTTTCATTTTCAGCAGTTATTATGAAATAAAAAGAGCCCTTCTGTTCTTCCTCCTCAGTGAAGATATCTATGTTTTCTGTGATGTTTCCTCAATGATTATTATTATTATTATGTTTGGATTTTCTGGAGTTAATTAATATATCC

mRNA sequence

ATGCATTTCACAATGGACATTGGCCCACCACTTTCAACCCAAAAGACTGTTGATGGACCATCTAGCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTCAACATCATCCCTAGCAGCTGTCGTCAAGTTCTCCCTGCATTGAATGGAAAACTGACCGGTATGGCTTTTCGTGTTCCTACCGTTGATGTCTCGGTAGTTGACCTTACAGTGAGGTTGGAGAAGGCAGCATCTTATGAAGATATTAAAGCTGCTATCAAGGAGGAGTCTGAGGGAAAGTTAAAAGGAATTCTGGGTTACACCGAAGACGAGGTGGTGTCCACTGATTTTATGGGTGACAACAGGTCAAGTATTTTCGACGCCAAGGCCGGGATTGCACTGAACAAAAACTACGTGAAGCTCGTGTCGTGGTACGACAACGAGTTAGGCTACAGGTACAAACAAATCCAAAGGCTTTGCATTACTGCAGTAATCCTCCAGTTGCCGCTTTACCTTTCATTTTCAGCAGTTATTATGAAATAAAAAGAGCCCTTCTGTTCTTCCTCCTCAGTGAAGATATCTATGTTTTCTGTGATGTTTCCTCAATGATTATTATTATTATTATGTTTGGATTTTCTGGAGTTAATTAATATATCC

Coding sequence (CDS)

ATGCATTTCACAATGGACATTGGCCCACCACTTTCAACCCAAAAGACTGTTGATGGACCATCTAGCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTCAACATCATCCCTAGCAGCTGTCGTCAAGTTCTCCCTGCATTGAATGGAAAACTGACCGGTATGGCTTTTCGTGTTCCTACCGTTGATGTCTCGGTAGTTGACCTTACAGTGAGGTTGGAGAAGGCAGCATCTTATGAAGATATTAAAGCTGCTATCAAGGAGGAGTCTGAGGGAAAGTTAAAAGGAATTCTGGGTTACACCGAAGACGAGGTGGTGTCCACTGATTTTATGGGTGACAACAGGTCAAGTATTTTCGACGCCAAGGCCGGGATTGCACTGAACAAAAACTACGTGAAGCTCGTGTCGTGGTACGACAACGAGTTAGGCTACAGGTACAAACAAATCCAAAGGCTTTGCATTACTGCAGTAATCCTCCAGTTGCCGCTTTACCTTTCATTTTCAGCAGTTATTATGAAATAA

Protein sequence

MHFTMDIGPPLSTQKTVDGPSSKDWRGGRAASFNIIPSSCRQVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIALNKNYVKLVSWYDNELGYRYKQIQRLCITAVILQLPLYLSFSAVIMK
Homology
[Close]
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.4e-60
Identity = 120/152 (78.95%), Postives = 132/152 (86.84%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRA SFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 174 ATQKTVDGPSMKDWRGGRATSFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 233

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASY+DIKAAIKEESEGKLKGILG+TED+VVSTDF+GD+RSSIFDAKAGIA
Sbjct: 234 VDLTVRLEKEASYDDIKAAIKEESEGKLKGILGFTEDDVVSTDFVGDSRSSIFDAKAGIA 293

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCITAVI 158
           L+KN+VKLVSWYDNE GY  + I  +C  A +
Sbjct: 294 LSKNFVKLVSWYDNEWGYSSRVIDLICHMASV 325

[Close]
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.0e-60
Identity = 118/138 (85.51%), Postives = 127/138 (92.03%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPSSKDWRGGRAASFNIIPSS        +VLPALNGKLTGM+FRVPTVDVSV
Sbjct: 186 ATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSV 245

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEKAA+Y++IKAAIKEESEGKLKGILGYTED+VVSTDF+GD RSSIFDAKAGIA
Sbjct: 246 VDLTVRLEKAATYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIA 305

Query: 132 LNKNYVKLVSWYDNELGY 144
           LN  +VKLVSWYDNELGY
Sbjct: 306 LNDKFVKLVSWYDNELGY 323

[Close]
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-59
Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPSSKDWRGGRAA FNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 187 ATQKTVDGPSSKDWRGGRAAGFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 246

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEKAASYE+IKA IK ESEGKLKGILGYTE++VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 247 VDLTVRLEKAASYEEIKAVIKAESEGKLKGILGYTEEDVVSTDFIGDNRSSIFDAKAGIA 306

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCI 154
           LN+++VKLVSWYDNE GY  + I  + I
Sbjct: 307 LNEHFVKLVSWYDNEWGYSSRVIDLILI 334

[Close]
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-59
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPT DVSV
Sbjct: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTCDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVR+EKAASYE IKAAIKEESEGKLKGILGYTED++VSTDF+GDNRSSIFDAKAGI+
Sbjct: 245 VDLTVRIEKAASYEQIKAAIKEESEGKLKGILGYTEDDLVSTDFIGDNRSSIFDAKAGIS 304

Query: 132 LNKNYVKLVSWYDNELGY 144
           LN N+VKLVSWYDNE GY
Sbjct: 305 LNDNFVKLVSWYDNEWGY 322

[Close]
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-59
Identity = 116/138 (84.06%), Postives = 128/138 (92.75%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS+KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK A+Y++IKAAIKEESEGKLKGI G+TED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKEATYDEIKAAIKEESEGKLKGIPGHTEDDVVSTDFIGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGY 144
           L+KN+VKLVSWYDNE+GY
Sbjct: 305 LSKNFVKLVSWYDNEMGY 322

[Close]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match: A0A0A0LWK9_CUCSA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cucumis sativus GN=Csa_1G050250 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYEDIKAAIKEESEG LKGILGYTEDEVVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKPASYEDIKAAIKEESEGNLKGILGYTEDEVVSTDFLGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQI 149
           LNKNYVKL+SWYDNELGY  + I
Sbjct: 305 LNKNYVKLISWYDNELGYSTRVI 327

[Close]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match: E5GBV8_CUCME (Glyceraldehyde-3-phosphate dehydrogenase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYEDIKAAIKEESEG LKGILGYTEDEVVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKPASYEDIKAAIKEESEGNLKGILGYTEDEVVSTDFLGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQI 149
           LNKNYVKL+SWYDNELGY  + I
Sbjct: 305 LNKNYVKLISWYDNELGYSTRVI 327

[Close]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match: I1KC70_SOYBN (Glyceraldehyde-3-phosphate dehydrogenase OS=Glycine max GN=GLYMA_06G172700 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-59
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS+KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASY++IK AIKEESEGKLKGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKEASYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCITA 156
           LNKN+VKLVSWYDNE GY  + I  L I A
Sbjct: 305 LNKNFVKLVSWYDNEWGYSSRVIDLLVIVA 334

[Close]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match: A0A0B2QUF8_GLYSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Glycine soja GN=glysoja_040236 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-59
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS+KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASY++IK AIKEESEGKLKGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKEASYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCITA 156
           LNKN+VKLVSWYDNE GY  + I  L I A
Sbjct: 305 LNKNFVKLVSWYDNEWGYSSRVIDLLVIVA 334

[Close]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match: A0A0F7JLU6_NICBE (Glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana benthamiana GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.2e-59
Identity = 121/152 (79.61%), Postives = 133/152 (87.50%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 188 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 247

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASY+DIKAAIKEESEGKLKGILG+TED+VVSTDF+GD+RSSIFDAKAGIA
Sbjct: 248 VDLTVRLEKEASYDDIKAAIKEESEGKLKGILGFTEDDVVSTDFVGDSRSSIFDAKAGIA 307

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCITAVI 158
           L+KN+VKLVSWYDNE GY  + I  +C  A +
Sbjct: 308 LSKNFVKLVSWYDNEWGYSSRVIDLICHMASV 339

[Close]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match: AT3G04120.1 (AT3G04120.1 glyceraldehyde-3-phosphate dehydrogenase C subunit 1)

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-59
Identity = 115/138 (83.33%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGM+FRVPTVDVSV
Sbjct: 187 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSV 246

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEKAA+Y++IK AIKEESEGKLKGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 247 VDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306

Query: 132 LNKNYVKLVSWYDNELGY 144
           L+  +VKLVSWYDNE GY
Sbjct: 307 LSDKFVKLVSWYDNEWGY 324

[Close]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match: AT1G13440.1 (AT1G13440.1 glyceraldehyde-3-phosphate dehydrogenase C2)

HSP 1 Score: 223.8 bits (569), Expect = 8.2e-59
Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLP+LNGKLTGM+FRVPTVDVSV
Sbjct: 187 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSV 246

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEKAA+Y++IK AIKEESEGK+KGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 247 VDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 306

Query: 132 LNKNYVKLVSWYDNELGY 144
           L+  +VKLVSWYDNE GY
Sbjct: 307 LSDKFVKLVSWYDNEWGY 324

[Close]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match: AT1G79530.1 (AT1G79530.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 1)

HSP 1 Score: 203.8 bits (517), Expect = 8.8e-53
Identity = 104/138 (75.36%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGR AS NIIPSS        +VLP LNGKLTGMAFRVPT +VSV
Sbjct: 267 ATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSV 326

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLT RLEK ASYED+KAAIK  SEG LKGILGYT+++VVS DF+GD+RSSIFDA AGI 
Sbjct: 327 VDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAGIG 386

Query: 132 LNKNYVKLVSWYDNELGY 144
           L+K++VKLVSWYDNE GY
Sbjct: 387 LSKSFVKLVSWYDNEWGY 404

[Close]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match: AT1G16300.1 (AT1G16300.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 2)

HSP 1 Score: 201.1 bits (510), Expect = 5.7e-52
Identity = 103/138 (74.64%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGR AS NIIPSS        +VLP LNGKLTGMAFRVPT +VSV
Sbjct: 265 ATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 324

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLT RLEK ASYED+KAAIK  SEG L+GILGYTE++VVS DF+GD+RSSIFDA AGI 
Sbjct: 325 VDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANAGIG 384

Query: 132 LNKNYVKLVSWYDNELGY 144
           L+K+++KLVSWYDNE GY
Sbjct: 385 LSKSFMKLVSWYDNEWGY 402

[Close]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match: AT1G12900.1 (AT1G12900.1 glyceraldehyde 3-phosphate dehydrogenase A subunit 2)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 1 

Query: 14  QKTVDGPSSKDWRGGRAASFNIIPSSCRQ------VLPALNGKLTGMAFRVPTVDVSVVD 73
           Q+ +D  S +D R  RAA+ NI+P+S         VLP L GKL G+A RVPT +VSVVD
Sbjct: 249 QRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVD 308

Query: 74  LTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIALN 133
           L V++ K    E++ AA ++ +E +LKGIL   ++ +VS DF   + SS  D+   + + 
Sbjct: 309 LVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMG 368

Query: 134 KNYVKLVSWYDNELGYRYKQIQRLCITA 156
            + VK+++WYDNE GY  + +    I A
Sbjct: 369 DDMVKVIAWYDNEWGYSQRVVDLADIVA 395

[Close]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match: gi|449469618|ref|XP_004152516.1| (PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.8e-60
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYEDIKAAIKEESEG LKGILGYTEDEVVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKPASYEDIKAAIKEESEGNLKGILGYTEDEVVSTDFLGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQI 149
           LNKNYVKL+SWYDNELGY  + I
Sbjct: 305 LNKNYVKLISWYDNELGYSTRVI 327

[Close]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match: gi|659067433|ref|XP_008439408.1| (PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 1.8e-60
Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYEDIKAAIKEESEG LKGILGYTEDEVVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKPASYEDIKAAIKEESEGNLKGILGYTEDEVVSTDFLGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQI 149
           LNKNYVKL+SWYDNELGY  + I
Sbjct: 305 LNKNYVKLISWYDNELGYSTRVI 327

[Close]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match: gi|356516587|ref|XP_003526975.1| (PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Glycine max])

HSP 1 Score: 236.9 bits (603), Expect = 2.7e-59
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS+KDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASY++IK AIKEESEGKLKGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKEASYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLCITA 156
           LNKN+VKLVSWYDNE GY  + I  L I A
Sbjct: 305 LNKNFVKLVSWYDNEWGYSSRVIDLLVIVA 334

[Close]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match: gi|720081635|ref|XP_010242342.1| (PREDICTED: glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [Nelumbo nucifera])

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-59
Identity = 121/138 (87.68%), Postives = 127/138 (92.03%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPSSKDWRGGRAASFNIIPSS        +VLPALNGKLTGMAFRVPTVDVSV
Sbjct: 185 ATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYE+IKAAIKEESEGKLKGILGYTED+VVSTDF+GDNRSSIFDAKAGIA
Sbjct: 245 VDLTVRLEKKASYEEIKAAIKEESEGKLKGILGYTEDDVVSTDFLGDNRSSIFDAKAGIA 304

Query: 132 LNKNYVKLVSWYDNELGY 144
           LN N+VKLVSWYDNE GY
Sbjct: 305 LNDNFVKLVSWYDNEWGY 322

[Close]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match: gi|22094840|gb|AAM92008.1|AF527779_1 (glyceraldehyde 3-phosphate dehydrogenase [Solanum tuberosum])

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-58
Identity = 120/147 (81.63%), Postives = 130/147 (88.44%), Query Frame = 1 

Query: 12  STQKTVDGPSSKDWRGGRAASFNIIPSSCR------QVLPALNGKLTGMAFRVPTVDVSV 71
           +TQKTVDGPS KDWRGGRAASFNIIPSS        +VLP+LNGKLTGMAFRVPT DVSV
Sbjct: 187 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTADVSV 246

Query: 72  VDLTVRLEKAASYEDIKAAIKEESEGKLKGILGYTEDEVVSTDFMGDNRSSIFDAKAGIA 131
           VDLTVRLEK ASYEDIKAAIKEESEGKLKGILGYTED+VVSTDF+GD+RSSIFDAKAGIA
Sbjct: 247 VDLTVRLEKEASYEDIKAAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIA 306

Query: 132 LNKNYVKLVSWYDNELGYRYKQIQRLC 153
           L+KN+VKLVSWYDNE GY  + I  +C
Sbjct: 307 LSKNFVKLVSWYDNEWGYSSRVIDLIC 333

The following BLAST results are available for this feature:
BLAST of CmaCh13G007880.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
G3PC_TOBAC2.4e-6078.95Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana taba... [more]
G3PC_PEA7.0e-6085.51Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE... [more]
G3PC_MAGLI1.6e-5980.41Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GA... [more]
G3PC_MESCR2.7e-5984.78Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystall... [more]
G3PC_PETHY3.5e-5984.06Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC P... [more]
BLAST of CmaCh13G007880.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWK9_CUCSA1.3e-6086.71Glyceraldehyde-3-phosphate dehydrogenase OS=Cucumis sativus GN=Csa_1G050250 PE=3... [more]
E5GBV8_CUCME1.3e-6086.71Glyceraldehyde-3-phosphate dehydrogenase OS=Cucumis melo subsp. melo PE=3 SV=1[more]
I1KC70_SOYBN1.9e-5982.00Glyceraldehyde-3-phosphate dehydrogenase OS=Glycine max GN=GLYMA_06G172700 PE=3 ... [more]
A0A0B2QUF8_GLYSO1.9e-5982.00Glyceraldehyde-3-phosphate dehydrogenase OS=Glycine soja GN=glysoja_040236 PE=3 ... [more]
A0A0F7JLU6_NICBE9.2e-5979.61Glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana benthamiana GN=GAPC1 PE=2 ... [more]
BLAST of CmaCh13G007880.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04120.12.2e-5983.33 glyceraldehyde-3-phosphate dehydrogenase C subunit 1[more]
AT1G13440.18.2e-5981.88 glyceraldehyde-3-phosphate dehydrogenase C2[more]
AT1G79530.18.8e-5375.36 glyceraldehyde-3-phosphate dehydrogenase of plastid 1[more]
AT1G16300.15.7e-5274.64 glyceraldehyde-3-phosphate dehydrogenase of plastid 2[more]
AT1G12900.11.1e-2340.54 glyceraldehyde 3-phosphate dehydrogenase A subunit 2[more]
BLAST of CmaCh13G007880.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469618|ref|XP_004152516.1|1.8e-6086.71PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [Cucumis sat... [more]
gi|659067433|ref|XP_008439408.1|1.8e-6086.71PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Cucumis melo][more]
gi|356516587|ref|XP_003526975.1|2.7e-5982.00PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Glycine max][more]
gi|720081635|ref|XP_010242342.1|5.9e-5987.68PREDICTED: glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [Nelumbo nucife... [more]
gi|22094840|gb|AAM92008.1|AF527779_11.3e-5881.63glyceraldehyde 3-phosphate dehydrogenase [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR020829GlycerAld_3-P_DH_cat
IPR020831GlycerAld/Erythrose_P_DH
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
molecular_function GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0050661 NADP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh13G007880CmaCh13G007880gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh13G007880.1CmaCh13G007880.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G007880.1.exon.1CmaCh13G007880.1.exon.1exon
CmaCh13G007880.1.exon.2CmaCh13G007880.1.exon.2exon
CmaCh13G007880.1.exon.3CmaCh13G007880.1.exon.3exon
CmaCh13G007880.1.exon.4CmaCh13G007880.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G007880.1.CDS.1CmaCh13G007880.1.CDS.1CDS
CmaCh13G007880.1.CDS.2CmaCh13G007880.1.CDS.2CDS
CmaCh13G007880.1.CDS.3CmaCh13G007880.1.CDS.3CDS
CmaCh13G007880.1.CDS.4CmaCh13G007880.1.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G007880.1.three_prime_UTR.1CmaCh13G007880.1.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020829Glyceraldehyde 3-phosphate dehydrogenase, catalytic domainPFAMPF02800Gp_dh_Ccoord: 12..137
score: 2.4
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPRINTSPR00078G3PDHDRGNASEcoord: 2..18
score: 3.6E-6coord: 93..108
score: 3.
IPR020831Glyceraldehyde/Erythrose phosphate dehydrogenase familyPANTHERPTHR10836GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASEcoord: 13..162
score: 1.5E
NoneNo IPR availableGENE3DG3DSA:3.30.360.10coord: 11..139
score: 1.4
NoneNo IPR availablePANTHERPTHR10836:SF44SUBFAMILY NOT NAMEDcoord: 13..162
score: 1.5E
NoneNo IPR availableunknownSSF55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 12..137
score: 2.12