CmaCh13G003500.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh13G003500.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr13 : 4058477 .. 4060013 (-)
Sequence length348
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGTTTCACATCCCAAGGCATGGATGGTTCAACAAAACTACCTCGGATTATCTCCCCATTCTCCAAGGAACTTGTTAGTTAGCAAGAGACATAGGCCATCCCTATCTTAAATGGTTGGTTGGTTCATCATAACTTACCCACTTAGTTGGAAAATCAATTTGTACCAAGGAAAACAAGCTATTATGTGAGATCCCACATCGATTGGAGAGAGGAACAAATGTCCCACATCAATTGGAGACAATTGGAGAAGGGAACGGGGCCAGCGAGGACGCTGGGCCCCGAGGGGGGTGAATTGTGAGATCCCATATTGATTGGAGATAGGAATAATATATTCTTTATAAGAGTATGGAAATCTCTCCCTAGCAGCCGCATTTAAAAACCTTGAGGGGAAACCCAAAAGATTTGGACTGTTTACACATTCAATTGTATTGTAACTAAACAAGAGCTAAGCATAGAATAAGAGCTTAGAATGATGGTTTTCATACTACTCTGACTGTCAGGAGTATTAGATCATCTAGGAGAAAGAATCCCCAAAAAGTGGCTTAAATCAAACAGTAGGTTTTCCTAAAGATTAAACAATTTTTCTATATAAACCACTAAACGTAGTACATAACTAAAGCTCTAATGACTATAAGTAGAAGGACGTCATGACATACCTAGATCTGCTGAAATAAGTGCCTCTCCATCGTAATTGGGTCCAGCTAGGATTGTACCTGATGGTGATATGATGACACTACCCCCAGCACAAACAACAGAATCTGGGCTGAGTTCCTCTTCTGTGCCAGAAAAAACATAATCTGGTGGAGGTGGGTAGTCTTTTCTTCGGCAGAACTGGTTGGCTGACAAAACAAAACATCCACCCTCCAAAGCAATGTGGGTCATAGATGCTTGCCATGTATCCCGAGAATCAGCAGTAGGTGCACAATATATTTCAATGCCTAAAACAGGACCACAAATATAAGTCAGTTTCTAGTGATCGACAGGTCGAGCAAAAGAAAAGGAACGTGTGGACGGAAGTTACGTAACTTTCAAGTAAAAATTTTGAGCGTTAAGGTAGCAGTATAACTTTAACCATATGAAAATCTTCTGTTAAATGAAAATTTTCATCTAATTTAGTTAATGAGCACTTTACAGTCGAACAAAATGAATGGAATTGGATTTAAAATGGGAAGGTCAGGGATTTTATTATTTCAAGCGAAGAATAACTAACCTTTGGCATACATAGCTGTTCTTAGGAGTGGCATTCTGTTTTCCCAACAAATGGCAGCACCTATCTTTCCAATTGAAGTCTCAAAAACAGGAATTGTTGATCCATCACCAAATCCCCAGATTATCCGCTCCAATGCAGTTGGCATCACTTTCCTGTGCTTACCCAAGTAACGACCTTGAGGATCAAAAAATAGAACGGTACAGTACAGTGTGTAGCCATCTCTCTCTATTACCCCCATTACCAAATGCACCCTATACTTTCCAGCCATTGCTGCCAATCGATCAACTTCAGGACCTGCATGTATCGTTATCAACATATTAA

mRNA sequence

ATGGAAAAGTTTCACATCCCAAGGCATGGATGGTTCAACAAAACTACCTCGGATTATCTCCCCATTCTCCAAGGAACTTGTCGAGCAAAAGAAAAGGAACGTGTGGACGGAAGTTACGAATTGTTGATCCATCACCAAATCCCCAGATTATCCGCTCCAATGCAGTTGGCATCACTTTCCTGTGCTTACCCAAGTAACGACCTTGAGGATCAAAAAATAGAACGGTACAGTACAGTGTGTAGCCATCTCTCTCTATTACCCCCATTACCAAATGCACCCTATACTTTCCAGCCATTGCTGCCAATCGATCAACTTCAGGACCTGCATGTATCGTTATCAACATATTAA

Coding sequence (CDS)

ATGGAAAAGTTTCACATCCCAAGGCATGGATGGTTCAACAAAACTACCTCGGATTATCTCCCCATTCTCCAAGGAACTTGTCGAGCAAAAGAAAAGGAACGTGTGGACGGAAGTTACGAATTGTTGATCCATCACCAAATCCCCAGATTATCCGCTCCAATGCAGTTGGCATCACTTTCCTGTGCTTACCCAAGTAACGACCTTGAGGATCAAAAAATAGAACGGTACAGTACAGTGTGTAGCCATCTCTCTCTATTACCCCCATTACCAAATGCACCCTATACTTTCCAGCCATTGCTGCCAATCGATCAACTTCAGGACCTGCATGTATCGTTATCAACATATTAA

Protein sequence

MEKFHIPRHGWFNKTTSDYLPILQGTCRAKEKERVDGSYELLIHHQIPRLSAPMQLASLSCAYPSNDLEDQKIERYSTVCSHLSLLPPLPNAPYTFQPLLPIDQLQDLHVSLSTY
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh13G003500CmaCh13G003500gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh13G003500.1CmaCh13G003500.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G003500.1.CDS.3CmaCh13G003500.1.CDS.3CDS
CmaCh13G003500.1.CDS.2CmaCh13G003500.1.CDS.2CDS
CmaCh13G003500.1.CDS.1CmaCh13G003500.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh13G003500.1.exon.3CmaCh13G003500.1.exon.3exon
CmaCh13G003500.1.exon.2CmaCh13G003500.1.exon.2exon
CmaCh13G003500.1.exon.1CmaCh13G003500.1.exon.1exon