CmaCh13G000500.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G000500.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ring finger protein, putative
Location	Cma_Chr13 : 465470 .. 466249 (-)
Sequence length	780

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTTGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCACGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTGACGGAGGAGCGGAGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTTATTCTGATTCTTCTTCTTCTTCTTCTTCCTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTTGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCACGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTGACGGAGGAGCGGAGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTTATTCTGATTCTTCTTCTTCTTCTTCTTCCTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCATATTCTCCTACAACAGCAACATCATGCTTGCCGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTTGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCACGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCGCGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTGACGGAGGAGCGGAGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTTATTCTGATTCTTCTTCTTCTTCTTCTTCCTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTGAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Protein sequence

MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV

Homology

[Close]

BLAST of CmaCh13G000500.1 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.1e-36
Identity = 85/177 (48.02%), Postives = 112/177 (63.28%), Query Frame = 1


Query: 6   TSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 TAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAAD 165
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

[Close]

BLAST of CmaCh13G000500.1 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 7.1e-24
Identity = 62/173 (35.84%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHKDP--IECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 181
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREV 181

[Close]

BLAST of CmaCh13G000500.1 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-21
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1


Query: 9   IGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCTAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of CmaCh13G000500.1 vs. Swiss-Prot
Match: ATL3_ARATH (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.7e-20
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 1


Query: 20  SNIMLAALISLLLVVLFVLLLHAYANCFF----------PQPRHRRTSVTVSYVLGPPRL 79
           S I+L A+I L + VLFVL+LH YA  ++           Q +  +        + PP +
Sbjct: 22  SKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVV 81

Query: 80  SR-----FDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERE 139
           +R     F  VP    A  + GL    +S++P+  +  +   C   +EC ICLSE  + +
Sbjct: 82  TRRQRRRFIFVP-GQDALSNTGLTSFELSSLPIVFFRQDS--CKDGLECSICLSELVKGD 141

Query: 140 LGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVE 171
             R LPKC+H FH+ECIDMW  SH++CP+CR  VLG     S  VE
Sbjct: 142 KARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVE 184

[Close]

BLAST of CmaCh13G000500.1 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19
Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRR-QNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERSNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPL 229
           +  +        + SSSSS  S  S+ SSS+  P+
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSSGSPV 207

[Close]

BLAST of CmaCh13G000500.1 vs. TrEMBL
Match: A0A0A0LXP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.1e-92
Identity = 201/264 (76.14%), Postives = 213/264 (80.68%), Query Frame = 1


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH-RRTSVTVSY 63
           NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH RRTSVTVSY
Sbjct: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 122

Query: 64  VLGPPRLSRFDSVPFDSGAAPS--KGLDPSVISAIPLFVYESEEKKCTAV---MECVICL 123
           VL PPRLSRFDSVPFD G+APS  KGLDPSVISAIPLFVYESEEKKC A    MECVICL
Sbjct: 123 VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 182

Query: 124 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 183
           SEFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDAVE    SGE
Sbjct: 183 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVE----SGE 242

Query: 184 REIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQP--LMSLGASL 243
            EIG E V           NEGQ+ QF SDSS        SSS+SS D P  + S+GASL
Sbjct: 243 GEIGRETV-----------NEGQSVQFNSDSS--------SSSTSSVDPPPLMSSIGASL 302

Query: 244 KRMLSRNRSDGRIFPSSDGDELDV 260
            R+LSRNRSDGRIFPSS+G+EL V
Sbjct: 303 IRILSRNRSDGRIFPSSNGEELGV 303

[Close]

BLAST of CmaCh13G000500.1 vs. TrEMBL
Match: D7SJU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-48
Identity = 128/259 (49.42%), Postives = 171/259 (66.02%), Query Frame = 1


Query: 5   STSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR-TSVTVSYV 64
           S+    F +S+FSYN N+MLAA++SLLLV+LFVL+LH YA  F    RHRR +SV+VS+V
Sbjct: 11  SSPFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHRRRSSVSVSHV 70

Query: 65  LGPPRLSRFDSVPFDS--GAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFE 124
           L P R   F +  F++    +P+KGLD S IS+IPLFVY++EE K    +ECVICLS FE
Sbjct: 71  LRPTRFHHFHTFTFETTLSGSPTKGLDSSAISSIPLFVYKAEEHKHG--LECVICLSVFE 130

Query: 125 ERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGERE-- 184
           + ++GR LPKC H FH++CIDMWL+SH++CP+CRAP   +    S   E+    G  E  
Sbjct: 131 DDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAPAACEKKAVSQPDEAILQEGSIELS 190

Query: 185 ---IGGEIVTEERSNCE--IQRNEGQNGQFYSD-SSSSSSSSSLSSSSSSTDQPLMSLGA 244
              IG   + +E S  E  ++  + +NG   +D   S S+SSSLSS SS       SLG+
Sbjct: 191 EAFIGDLGLIDEDSPMELVVEIPDSENGNAVTDIHDSLSASSSLSSQSS-------SLGS 250

Query: 245 SLKRMLSRNRSDGRIFPSS 253
           SLKRMLSRNRS+ ++ PSS
Sbjct: 251 SLKRMLSRNRSEHKVHPSS 260

[Close]

BLAST of CmaCh13G000500.1 vs. TrEMBL
Match: A0A061GXF4_THECC (Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.4e-47
Identity = 129/256 (50.39%), Postives = 169/256 (66.02%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR--TSVTVSYVLGPPRLSR 73
           SI SY+ N+MLAA+ISLLLV+LFVLLLH YA  F  Q R R   +S++VS+V  P R  R
Sbjct: 22  SISSYDGNVMLAAVISLLLVILFVLLLHVYAKWFLAQARQRSRSSSMSVSHVFRPDRFHR 81

Query: 74  FDSVPFDSG--AAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRL 133
           F +  FD+   ++P KGLD SVIS+IPLFVY  EE K    +ECVICLS FE+ ++GR L
Sbjct: 82  FHAFTFDTTFRSSPLKGLDSSVISSIPLFVYTMEEYKHN--LECVICLSPFEDDDVGRNL 141

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCRAPVLGD--AADCS-DAVESGRLSGEREIG---GE 193
           PKC H FH+ECIDMWL SH++CP+CRAPVL +   AD    ++ES  +   RE+G   G 
Sbjct: 142 PKCGHCFHVECIDMWLQSHSNCPICRAPVLSNDKVADSEVSSLESVGVLLNREVGVIDGN 201

Query: 194 IVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNR 253
           +  +  +  E+  +  +      D   S+SSSSL+ SS        SLG SLKRMLSRNR
Sbjct: 202 LRLDNLT--ELSDSNNRPTAAADDDILSASSSSLTLSS--------SLGCSLKRMLSRNR 261

Query: 254 SDGRIFPSSDGDELDV 260
           S+ ++FPSS+  E++V
Sbjct: 262 SERKVFPSSNASEMEV 265

[Close]

BLAST of CmaCh13G000500.1 vs. TrEMBL
Match: B9GGQ3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s28610g PE=4 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 2.3e-45
Identity = 137/255 (53.73%), Postives = 164/255 (64.31%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR--TSVTVSYVLGPPRLSR 73
           SI SY+SNIMLAA+ISLLLV+LFVLLLH YA  F  Q RHRR  +SV+VS+VL   R   
Sbjct: 19  SISSYDSNIMLAAVISLLLVILFVLLLHIYAKWFLAQARHRRRSSSVSVSHVLRASRFHH 78

Query: 74  FDSVPFDS--GAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRL 133
           F +   D+    +PSKGLD SVIS+IPLFVY++EE  C   +ECVICLS FEE E+G+ L
Sbjct: 79  FHNFTVDTTFSTSPSKGLDRSVISSIPLFVYKAEE--CKQGLECVICLSPFEENEVGKSL 138

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCS-DAVESGRLSGER------EIGG 193
            KC HGFH+ECIDMWLNSH++CPVCRAP +GD  D + D ++S  +S E         GG
Sbjct: 139 TKCGHGFHVECIDMWLNSHSNCPVCRAPAVGDDNDIAIDDLKSTEVSRESTDERGLSDGG 198

Query: 194 ----EIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKRM 252
               EIVT E SN E   NE  N     D  S S S+SLS SS            SLKRM
Sbjct: 199 ASRLEIVT-EFSNSE---NENGNVAVNRDCLSESPSTSLSLSS------------SLKRM 254

[Close]

BLAST of CmaCh13G000500.1 vs. TrEMBL
Match: B9HND1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g PE=4 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 121/239 (50.63%), Postives = 151/239 (63.18%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR--TSVTVSYVLGPPRLSR 73
           SI SY+SNIMLAA+ISLL+V+LFVLLLH YA  F  Q R+RR  +SVT S+VL P R   
Sbjct: 19  SISSYDSNIMLAAVISLLVVILFVLLLHIYAKWFLAQARNRRRSSSVTASHVLLPSRFHH 78

Query: 74  FDSVPFDS--GAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRL 133
             +   D+    + SKGLD SVIS+IPLFVY++EE  C   +ECVICLS FEE E GR L
Sbjct: 79  LHNFTIDTTFSTSTSKGLDTSVISSIPLFVYKAEE--CKQGLECVICLSPFEENEAGRSL 138

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTE-E 193
            +C HGFH+ECIDMWLNSH++CPVCRAP + D  D +   +S   S         +++  
Sbjct: 139 TRCGHGFHVECIDMWLNSHSNCPVCRAPAVSDDNDIASDGKSMEASTRESTDDRGLSDVG 198

Query: 194 RSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGR 248
            S  EI  +  +NG    +    S S S SS          SLG+SLKRMLSRNRS+ +
Sbjct: 199 DSRLEIVISNSENGNLAVNCDCLSESPSTSS----------SLGSSLKRMLSRNRSESK 245

[Close]

BLAST of CmaCh13G000500.1 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 152.1 bits (383), Expect = 4.6e-37
Identity = 85/177 (48.02%), Postives = 112/177 (63.28%), Query Frame = 1


Query: 6   TSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 TAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAAD 165
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSD 189

[Close]

BLAST of CmaCh13G000500.1 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-25
Identity = 62/173 (35.84%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHKDP--IECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 181
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREV 181

[Close]

BLAST of CmaCh13G000500.1 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1


Query: 9   IGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCTAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of CmaCh13G000500.1 vs. TAIR10
Match: AT1G72310.1 (AT1G72310.1 RING/U-box superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 1


Query: 20  SNIMLAALISLLLVVLFVLLLHAYANCFF----------PQPRHRRTSVTVSYVLGPPRL 79
           S I+L A+I L + VLFVL+LH YA  ++           Q +  +        + PP +
Sbjct: 22  SKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVV 81

Query: 80  SR-----FDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERE 139
           +R     F  VP    A  + GL    +S++P+  +  +   C   +EC ICLSE  + +
Sbjct: 82  TRRQRRRFIFVP-GQDALSNTGLTSFELSSLPIVFFRQDS--CKDGLECSICLSELVKGD 141

Query: 140 LGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVE 171
             R LPKC+H FH+ECIDMW  SH++CP+CR  VLG     S  VE
Sbjct: 142 KARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVE 184

[Close]

BLAST of CmaCh13G000500.1 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRR-QNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIGGEIVTEERSNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPL 229
           +  +        + SSSSS  S  S+ SSS+  P+
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSSGSPV 207

[Close]

BLAST of CmaCh13G000500.1 vs. NCBI nr
Match: gi|659115015|ref|XP_008457344.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 3.6e-100
Identity = 211/260 (81.15%), Postives = 221/260 (85.00%), Query Frame = 1


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR-TSVTVSY 63
           NSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRHRR TSVTVSY
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSY 64

Query: 64  VLGPPRLSRFDSV-PFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFE 123
           VL PPRLSRFDSV PFD G+APSKGLDPSVISAIPLFVYESEEKKC A MECVICLSEFE
Sbjct: 65  VLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSEFE 124

Query: 124 ERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIG 183
           ERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDA E    SGE EIG
Sbjct: 125 ERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAE----SGEGEIG 184

Query: 184 GEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQP--LMSLGASLKRML 243
            E V           NEGQ+GQF SDSSSSSSSSS SSSSSS D P  + S+GASL R+L
Sbjct: 185 RETV-----------NEGQSGQFNSDSSSSSSSSSSSSSSSSIDPPPLMSSIGASLIRIL 244

Query: 244 SRNRSDGRIFPSSDGDELDV 260
           SRNRSDGRIFPSS+G+ELDV
Sbjct: 245 SRNRSDGRIFPSSNGEELDV 249

[Close]

BLAST of CmaCh13G000500.1 vs. NCBI nr
Match: gi|659115017|ref|XP_008457345.1| (PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 2.7e-95
Identity = 203/259 (78.38%), Postives = 212/259 (81.85%), Query Frame = 1


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR-TSVTVSY 63
           NSTSL  FAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRHRR TSVTVSY
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSY 64

Query: 64  VLGPPRLSRFDSV-PFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFE 123
           VL PPRLSRFDSV PFD G+APSKGLDPSVISAIPLFVYESEEKKC A MECVICLSEFE
Sbjct: 65  VLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSEFE 124

Query: 124 ERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREIG 183
           ERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDA E    SGE EIG
Sbjct: 125 ERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAE----SGEGEIG 184

Query: 184 GEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLM-SLGASLKRMLS 243
            E V           NEGQ+GQF SDSSSSSS             PLM S+GASL R+LS
Sbjct: 185 RETV-----------NEGQSGQFNSDSSSSSSID---------PPPLMSSIGASLIRILS 239

Query: 244 RNRSDGRIFPSSDGDELDV 260
           RNRSDGRIFPSS+G+ELDV
Sbjct: 245 RNRSDGRIFPSSNGEELDV 239

[Close]

BLAST of CmaCh13G000500.1 vs. NCBI nr
Match: gi|449455140|ref|XP_004145311.1| (PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 1.6e-92
Identity = 201/264 (76.14%), Postives = 213/264 (80.68%), Query Frame = 1


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH-RRTSVTVSY 63
           NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH RRTSVTVSY
Sbjct: 5   NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 64

Query: 64  VLGPPRLSRFDSVPFDSGAAPS--KGLDPSVISAIPLFVYESEEKKCTAV---MECVICL 123
           VL PPRLSRFDSVPFD G+APS  KGLDPSVISAIPLFVYESEEKKC A    MECVICL
Sbjct: 65  VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 124

Query: 124 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 183
           SEFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDAVE    SGE
Sbjct: 125 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVE----SGE 184

Query: 184 REIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQP--LMSLGASL 243
            EIG E V           NEGQ+ QF SDSS        SSS+SS D P  + S+GASL
Sbjct: 185 GEIGRETV-----------NEGQSVQFNSDSS--------SSSTSSVDPPPLMSSIGASL 244

Query: 244 KRMLSRNRSDGRIFPSSDGDELDV 260
            R+LSRNRSDGRIFPSS+G+EL V
Sbjct: 245 IRILSRNRSDGRIFPSSNGEELGV 245

[Close]

BLAST of CmaCh13G000500.1 vs. NCBI nr
Match: gi|700210733|gb|KGN65829.1| (hypothetical protein Csa_1G532370 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 1.6e-92
Identity = 201/264 (76.14%), Postives = 213/264 (80.68%), Query Frame = 1


Query: 4   NSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRH-RRTSVTVSY 63
           NSTSL  FAQ+IFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRH RRTSVTVSY
Sbjct: 63  NSTSLTQFAQTIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHHRRTSVTVSY 122

Query: 64  VLGPPRLSRFDSVPFDSGAAPS--KGLDPSVISAIPLFVYESEEKKCTAV---MECVICL 123
           VL PPRLSRFDSVPFD G+APS  KGLDPSVISAIPLFVYESEEKKC A    MECVICL
Sbjct: 123 VLAPPRLSRFDSVPFDLGSAPSNSKGLDPSVISAIPLFVYESEEKKCAAAAAAMECVICL 182

Query: 124 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGE 183
           SEFEERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDAVE    SGE
Sbjct: 183 SEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAVE----SGE 242

Query: 184 REIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQP--LMSLGASL 243
            EIG E V           NEGQ+ QF SDSS        SSS+SS D P  + S+GASL
Sbjct: 243 GEIGRETV-----------NEGQSVQFNSDSS--------SSSTSSVDPPPLMSSIGASL 302

Query: 244 KRMLSRNRSDGRIFPSSDGDELDV 260
            R+LSRNRSDGRIFPSS+G+EL V
Sbjct: 303 IRILSRNRSDGRIFPSSNGEELGV 303

[Close]

BLAST of CmaCh13G000500.1 vs. NCBI nr
Match: gi|743796012|ref|XP_011003837.1| (PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica])

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 130/252 (51.59%), Postives = 160/252 (63.49%), Query Frame = 1


Query: 14  SIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR--TSVTVSYVLGPPRLSR 73
           SI SY+SNIMLAA+ISLLLV+LFVLLLH YA  F  Q R+RR  +SVT S+VL P R   
Sbjct: 19  SISSYDSNIMLAAVISLLLVILFVLLLHIYAKWFLAQARNRRRSSSVTASHVLLPSRFHH 78

Query: 74  FDSVPFDSGAAPS--KGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEFEERELGRRL 133
             +   D+  +PS  KGLD SVIS+IPLFVY++EE  C   +ECVICLS FEE E GR L
Sbjct: 79  LHNFTIDTTFSPSTSKGLDTSVISSIPLFVYKAEE--CKQGLECVICLSPFEENEAGRSL 138

Query: 134 PKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSD---AVESGRLSGEREIGGEIVT 193
            +C HGFH+ECIDMWLNSH++CPVCRAP +GD  D +    ++E+       + G   V 
Sbjct: 139 TRCGHGFHVECIDMWLNSHSNCPVCRAPAVGDDNDIASDGKSMEASTRESTDDRGLNGVG 198

Query: 194 EERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDG 253
           + R    I  +E  N     D  S S S+S             SLG+SLKRMLSRNRS+ 
Sbjct: 199 DSRLEIVISNSENGNLAVNCDCLSESPSTS------------SSLGSSLKRMLSRNRSES 256

Query: 254 RIFPSSDGDELD 259
           + FPS +  ELD
Sbjct: 259 KAFPSINVIELD 256

The following BLAST results are available for this feature:

BLAST of CmaCh13G000500.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL63_ARATH	8.1e-36	48.02	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1	[more]
ATL2_ARATH	7.1e-24	35.84	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2	[more]
ATL64_ARATH	3.3e-21	38.46	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1	[more]
ATL3_ARATH	3.7e-20	36.75	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1	[more]
ATL5_ARATH	2.4e-19	35.81	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1	[more]

BLAST of CmaCh13G000500.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXP0_CUCSA	1.1e-92	76.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532370 PE=4 SV=1	[more]
D7SJU6_VITVI	1.7e-48	49.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=...	[more]
A0A061GXF4_THECC	2.4e-47	50.39	Toxicos en levadura 2, putative OS=Theobroma cacao GN=TCM_042177 PE=4 SV=1	[more]
B9GGQ3_POPTR	2.3e-45	53.73	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s28610g P...	[more]
B9HND1_POPTR	1.5e-44	50.63	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g P...	[more]

BLAST of CmaCh13G000500.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58580.1	4.6e-37	48.02	TOXICOS EN LEVADURA 63	[more]
AT3G16720.1	4.0e-25	35.84	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	1.9e-22	38.46	RING/U-box superfamily protein	[more]
AT1G72310.1	2.1e-21	36.75	RING/U-box superfamily protein	[more]
AT3G62690.1	1.3e-20	35.81	AtL5	[more]

BLAST of CmaCh13G000500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115015\|ref\|XP_008457344.1\|	3.6e-100	81.15	PREDICTED: RING-H2 finger protein ATL63 isoform X1 [Cucumis melo]	[more]
gi\|659115017\|ref\|XP_008457345.1\|	2.7e-95	78.38	PREDICTED: RING-H2 finger protein ATL63 isoform X2 [Cucumis melo]	[more]
gi\|449455140\|ref\|XP_004145311.1\|	1.6e-92	76.14	PREDICTED: RING-H2 finger protein ATL63 [Cucumis sativus]	[more]
gi\|700210733\|gb\|KGN65829.1\|	1.6e-92	76.14	hypothetical protein Csa_1G532370 [Cucumis sativus]	[more]
gi\|743796012\|ref\|XP_011003837.1\|	1.1e-48	51.59	PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh13G000500	CmaCh13G000500	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000500.1	CmaCh13G000500.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000500.1.CDS.1	CmaCh13G000500.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh13G000500.1.exon.1	CmaCh13G000500.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 112..155 score: 1.6
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 113..154 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 113..155 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 111..158 score: 7.1
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 14..180 score: 6.7
None	No IPR available	PANTHER	PTHR14155:SF135	RING-H2 FINGER PROTEIN ATL63	coord: 14..180 score: 6.7
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 98..159 score: 2.78