CmaCh12G012380.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh12G012380.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr12 : 9697971 .. 9699543 (-)
Sequence length421
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATCAAATCTTGCTACTATAATAGGTAGCACCTCAATTCTAGAATCTGACTTTAAGTTCCATCTCTCTACCTTTGTTTCCGTTGATCAAAACCAGCTTTAGATCCCACCAAGTGTTGCCTCCTTGACTCCTTGACTTTTAAGACTCCATTAACCATTTCCTTTTTACAAATAAACAGACAAACGGCATCTCAAAGATTCCTACGGGCCCTTTCTTAGACTCGACATTGACTCAGACTCCAACTAACCTAAATATTAATCAATGCTATAACTCATGATTATATTGTTGTTTATGCTGATGATGATTAAGGGGTCAAAAGTTGATTCCATTTCGTTTGATGGTCGCTTTTGAATAATGCAGGTGGACTATTGACGTGGGATGGACAAGCACTTGGGTTAAGATTGTGAATGAATGGCTCGCTGTCTGTGTTTACTGTGAGTTTCTTTTCTGACAATGCCGTTTAGGTTTGAGTTTTGTTTCTTAAAAAAAAAAAAAAAAAAAAAAAAGATTTTTGCAAAAAATTAAAAATAAATAAAAGAGGATGTTTTGAACATTTTTTCTTTGACAACTTTCTTTTTCCTGTGAGAAAAAGTTGTAATTTCCACTTTCAAATTTTGAGCATTGTAAGTAGTTTTTAAAACTAAAAAATATGGCTCCATTTGGTTGTGTTGGTTTTTCAAAAGAAGGTTGTAAACTTCATTTCTTTTGTTATTTACTCTCTAAACATATTTTCAAAATTCAATCAACTAAAAAAAATTATTTTGTCTTTAAAATATGGTTAAAAATTCACATGTTTTCTCATGAAAAATATATATAATGTAGAGAAATGATGAAAACCAAAAACAATTGTAAAAAATAAAAAATTGAATGGTTACCAAATAGACTCAATAGTTTTTAAAATTTTTATTTTTGTCTTTAAAATTTGGCTAAAAATTCCAACGTTCCTATAAAAGATGAAAACTATAATAAATAAATTTGGAGAAAAGAAACATATTTTTAAAAGTAGAAAACTAAAAACTAGTGATCACATGTGAGCCATAAGTTATCTTTAAAACAATATTCTATTGTCCAAAGAAAAAAAAAAGGGAGTTTTTTATTTTCTTAAAATATATATTTTTAAAAGTTTTAGTTTTCGTTAAATGTTGTTAAATAATTATCTTCGTAACTATTTTGGCAGTATGGATGGTGGTGGCTCCAGTGATATGGAAGAACAGGCAGAGTATAGTAGGAGCTGTATGAGAAGCACTGACCTTCGCCACATATTCATTCGTTGCGTGGCTGCAAACACCATCAATATTCCTTGCTTTGCTGCTGTGATTAAGCGACTGCAAAATTCAAAACATGTAATTTCCACACAGAAATAAACCCCTATTTTTATTTAGTTTTGATTGATGATTGGATTTGTCCATTTCTCAATGCCACCCGAAAAGATAGGCATCTCCACAAATAGGAAAGAAAAAAATTTATTGTAAACCCCTAACATATTGTCCCATTTGTAAATATACACCAGCTTATTAAGCTTATGGACCATATTATTATAAAATTAGAAATTTCAAATTAGAAAACTGC

mRNA sequence

ATGGCAATCAAATCTTGCTACTATAATAGTATGGATGGTGGTGGCTCCAGTGATATGGAAGAACAGGCAGAGTATAGTAGGAGCTGTATGAGAAGCACTGACCTTCGCCACATATTCATTCGTTGCGTGGCTGCAAACACCATCAATATTCCTTGCTTTGCTGCTGTGATTAAGCGACTGCAAAATTCAAAACATGTAATTTCCACACAGAAATAAACCCCTATTTTTATTTAGTTTTGATTGATGATTGGATTTGTCCATTTCTCAATGCCACCCGAAAAGATAGGCATCTCCACAAATAGGAAAGAAAAAAATTTATTGTAAACCCCTAACATATTGTCCCATTTGTAAATATACACCAGCTTATTAAGCTTATGGACCATATTATTATAAAATTAGAAATTTCAAATTAGAAAACTGC

Coding sequence (CDS)

ATGGCAATCAAATCTTGCTACTATAATAGTATGGATGGTGGTGGCTCCAGTGATATGGAAGAACAGGCAGAGTATAGTAGGAGCTGTATGAGAAGCACTGACCTTCGCCACATATTCATTCGTTGCGTGGCTGCAAACACCATCAATATTCCTTGCTTTGCTGCTGTGATTAAGCGACTGCAAAATTCAAAACATGTAATTTCCACACAGAAATAA

Protein sequence

MAIKSCYYNSMDGGGSSDMEEQAEYSRSCMRSTDLRHIFIRCVAANTINIPCFAAVIKRLQNSKHVISTQK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh12G012380CmaCh12G012380gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh12G012380.1CmaCh12G012380.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G012380.1.three_prime_UTR.1CmaCh12G012380.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G012380.1.CDS.2CmaCh12G012380.1.CDS.2CDS
CmaCh12G012380.1.CDS.1CmaCh12G012380.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G012380.1.exon.2CmaCh12G012380.1.exon.2exon
CmaCh12G012380.1.exon.1CmaCh12G012380.1.exon.1exon