CmaCh12G010840.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G010840.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Signal peptidase complex subunit 3B
Location	Cma_Chr12 : 8554264 .. 8557902 (-)
Sequence length	1161

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATATGGATTCCTTCTGCTATGTTCGAGACTCCATTTCTTTTCCAAGTCTCTCGCATTGTTTCTTCTCTTTTTCCCTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTTTGGTGACCTTTGCGGCTACCATACTTGCTATCATTTGTGCTCTGGCTTCGTTTTCTGATACCCTCAAATCGCCTTCACCCATGGCACAAGTTCAGGTCTCTCTTATCTCTTTCTGGGTTTTTGTTTTCTCTCTTCCTTTTGGATCTGTGGTTTGAATTCTCTTGGATTTTGGTTGGTTTTTGATACTCATTTGGTGATTTGATTTGATACCCATTAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTATGGTTTCATTGGCTTTTCTCTTTGAGTTCGTGGGAATTTGTGTGAGGAGAGGGATTTTGAGGTTAATTGTGTAGTTGATTTCATTTTTATGAACGTGATGAGCTTTATGACCCCTTTGTTCCCATCTTTTGGAGTACGTGGTTTGTTCTTTGATGAATTGGGAGATTCTTTATCTGAAAATGATTGAAAATGGCTGGGGAGAAGACCCCATAGGTTAGTGTGAGATCCAACGTTGGTTGGAGAGGGGAAGGAAACATTTCGTATAAGGGTGTGGAAACATTTCCCTAGTAGACTCGTTTTAAAACCGCGAGGCTGACGGTGATACGTAATGGGTCAAATCGGACAATATTTACTTAGGGTGGGCTTGAGCTATTACAAATGGTATCAGAGCCAAACAGACACTGGACAATGTGTCAGCGTCTTGCTGGACCTCAAGGAGAGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAACGAAGGATTCCTTATAAGAGTGTGGAAACCTCTCCCTAACATACGCTTTTTATAAACCAGTGAGGCTAATGGTGATACATAACGAGCCAAAATGGACAAATTCTACTAGCAGTGGGCTTGGGTTGTTACAAATGGTATCAAAGCCAAATAAACACTAGGCAGTGTGCCAGCGAGGACTCTATGCCTCAAAAGATGGTGGATTGTGATATTTCACATTGGTTGGAGGGAGGAACAAAGGATTCCTTATGAGAGTGTGGAAACCTCTCCCTAGCACACGTTTTAAAAACCGTGAGACTAACGGTGATACGTAACGAGCTAAGGCGGACAATATTTACTAGCAGTGGGCTAAAGCTGTTACAAATGGTATCAGAGCCAAACAGACACTAGGCAATGTGTCAGCGAGGACGTTGGGCCTCAAAGAGGGTGGATTGTGAGATCCCACAATGGTTGGAGAGGGGACAAAACATTCCTTATAAGGGTGTAGAAACCTCTCCCTAACAGACACGTATTAAAAACCATGAGGCTAACGGCTATACGTAATAAGCCAAAGTAGACAATATTTACTAACCGTGGGTTTGGACGGTTACATATTACCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATGCTTAAGTTCTTCGCAGCACTTTTTTCAACCAATGTTCTTAATAACTCGCTATAACCAAAGAAAAGTAGTCAATATTTGTTGTTGATAAGGGTAAGTGAGATTCTTTGCTAGAGCAGCTAATGAGCTTAGAATGTGCCTTCTTGTTGCAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCAGTGGCAACCTATTATTCTCCTCTTTCTTTATTGTGTTCTCATAGTCCTTAACGGTCTGGTTGGTTAACTATGATTAGGCTCCTCAACTCTAGCAAAGACTTAACTCATAAAGTACCCTAACGTTCACGCCAAACGCTAAGCCATTCTCTCCAACTCTGTTACTACTAAGCCATTCTCCCCCATTTCCCATACCTCTTTGTTTAGCTTGAAGTTAATAGTGTTTTAAGGAGAAATTAGATTAGATGACGATGTTCTTTCTCCAATTTCGCTCGTTTGGAAAATGAACCTGTATAACAAATATATGATAAGGTAACACCTAAAAGGGACAATCACCGTGTAGAGAGCAACTGAAAGGGTTGTGTTTTCCTCCATCTTTCTTTCCCATTTTGAGGATCGAAATTTCTTGGGTTGTGTCCGTGCCTAGTTAGATCCTCTAATTCGGCTACCTCTCCCCAAGGCCGAACACATTTTGCATAGGATGATCACTGATCATTGGTGGCTTCTTTGCCTCTATTTGTGCAACAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGGTCCATCTCTATTTCCTATTACAATATGTTCTTAACCCGCTGTTGAGTTTCGTCTCTTTCAGCAACTCGCGTGACCTTCTAAATTTCTGGAATTTCATTTACAGATCTCACTCTGGGACAGTATTATACCCTCCAAAGCGAGCGCCAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGTTTGCCAACTTTGCCAACCAATCTATGATGATTATAAGCTTTATCCTAGAGTGACAAAGTTGTATTTCTCCTTATGCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTTTGGATACCGCTTGCCACAAGAATATAGATGAGCAAACTTCTCCATTGATATGTAATTTCTGAACTAAGTTTAACATAGGCTTTAGCATCAGCTTACTCAACATTAAAGAACAGTGAACATTTTCCAAGCCATGAATTCATCGAAAAAAAGAGTTAAATTTAGCGTAATCAAATGTCCATTGACCTCTGTTCTAATTTTGGATGCCTATGTTTAAGCTAATGAAGCAGCTCATATTGGCCCAACTGATCTCTACAAAGTCTAGACAAGAAAGGGATGATGCTATGTAAAGTACATTCTATGGAGATTGAGAATTGGATCTATTTTATTATCCATTGAATCAAGGGAGGAAGGTAAATTACCAATATTCATGGCTGAAATTCTTTCATCACAGCTCCTTCAAGAATCCCATCGATGCCAAAGTTAACTAAGAATTGTTGAGGATCAACGGGGCCAGGTAGCTGAAATGAGAGTGAAAATTCTCCTGGTGGGCACAGGTTGTGGGTTACCATTTCAAACACTTGAGAATGCTTTTTCACTGTTCTTTCACCTGTTGTTGTAACTCCTTGTATCACT

mRNA sequence

TGAAAATATGGATTCCTTCTGCTATGTTCGAGACTCCATTTCTTTTCCAAGTCTCTCGCATTGTTTCTTCTCTTTTTCCCTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTTTGGTGACCTTTGCGGCTACCATACTTGCTATCATTTGTGCTCTGGCTTCGTTTTCTGATACCCTCAAATCGCCTTCACCCATGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATTATACCCTCCAAAGCGAGCGCCAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTTTGGATACCGCTTGCCACAAGAATATAGATGAGCAAACTTCTCCATTGATATGTAATTTCTGAACTAAGTTTAACATAGGCTTTAGCATCAGCTTACTCAACATTAAAGAACAGTGAACATTTTCCAAGCCATGAATTCATCGAAAAAAAGAGTTAAATTTAGCGTAATCAAATGTCCATTGACCTCTGTTCTAATTTTGGATGCCTATGTTTAAGCTAATGAAGCAGCTCATATTGGCCCAACTGATCTCTACAAAGTCTAGACAAGAAAGGGATGATGCTATGTAAAGTACATTCTATGGAGATTGAGAATTGGATCTATTTTATTATCCATTGAATCAAGGGAGGAAGGTAAATTACCAATATTCATGGCTGAAATTCTTTCATCACAGCTCCTTCAAGAATCCCATCGATGCCAAAGTTAACTAAGAATTGTTGAGGATCAACGGGGCCAGGTAGCTGAAATGAGAGTGAAAATTCTCCTGGTGGGCACAGGTTGTGGGTTACCATTTCAAACACTTGAGAATGCTTTTTCACTGTTCTTTCACCTGTTGTTGTAACTCCTTGTATCACT

Coding sequence (CDS)

ATGCATTCATTTGGGTATCGAGCCAACGCTTTGGTGACCTTTGCGGCTACCATACTTGCTATCATTTGTGCTCTGGCTTCGTTTTCTGATACCCTCAAATCGCCTTCACCCATGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATTATACCCTCCAAAGCGAGCGCCAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTTTGGATACCGCTTGCCACAAGAATATAGATGA

Protein sequence

MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR

Homology

[Close]

BLAST of CmaCh12G010840.1 vs. Swiss-Prot
Match: SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.1e-73
Identity = 129/167 (77.25%), Postives = 147/167 (88.02%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA ICA+ASFSD   + +P AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD+IIP K  AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+VM GYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. Swiss-Prot
Match: SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 9.5e-70
Identity = 124/167 (74.25%), Postives = 147/167 (88.02%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MH+FGYRANAL+TFA T LA ICA+ASFSD   + +P A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD+IIP+K  AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. Swiss-Prot
Match: SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 5.1e-31
Identity = 74/166 (44.58%), Postives = 88/166 (53.01%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHS+  R     T AA +L   C  AS  D    PS  AQ  V  IN F  Q NGND   
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGND--- 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
                             +VFVFL AEYE  KNSLNQ+SLWD IIP K  A  Q+   +K
Sbjct: 61  ------------------KVFVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEY 167
           Y  +DQGS+LRGK+  L LHWHVMPK G M  +++ +  + LP  Y
Sbjct: 121 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 145

[Close]

BLAST of CmaCh12G010840.1 vs. Swiss-Prot
Match: SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum GN=spcs3 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-18
Identity = 49/166 (29.52%), Postives = 88/166 (53.01%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHS   RAN +V F   +L  +  L   S    S      +++  I+ F  Q N      
Sbjct: 1   MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQRNFEYSF- 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           +++++ A+L+ LF WNTK +F+++ AEY T +N L+Q+ +WD I+  K+ A       +K
Sbjct: 61  ISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLSK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEY 167
           Y  ++QG  L+     LT +++V+P +G +  +++    ++ P  Y
Sbjct: 121 YPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165

[Close]

BLAST of CmaCh12G010840.1 vs. Swiss-Prot
Match: SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.4e-18
Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 1


Query: 7   RANALVTFAATILAIICALASFSDTLKSPS-----PMAQVQVLSINWFQNQPNGNDEVSM 66
           RAN+L  F+ +++A +      +   K  S      +++V + ++  F      +D   +
Sbjct: 7   RANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRERSDLAFV 66

Query: 67  TLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAK-FQIHTSNK 126
           T +I+ADLQS+F WN KQ+F++L+AEY T  N+LNQ+ LWD II    + + F     +K
Sbjct: 67  TFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFLKDMKSK 126

Query: 127 YRFVDQGSNLRG-KEFNLTLHWHVMPKTG 149
           Y F D G+ L+G +   LTL W+V+P  G
Sbjct: 127 YFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155

[Close]

BLAST of CmaCh12G010840.1 vs. TrEMBL
Match: Q84KA8_CUCME (Signal peptidase protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-83
Identity = 155/167 (92.81%), Postives = 160/167 (95.81%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICALASFSDTL SPSP AQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK  AKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVM GYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TrEMBL
Match: A0A151TW12_CAJCA (Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_010496 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-78
Identity = 144/167 (86.23%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+AS SD   SP+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TrEMBL
Match: A0A151R4G4_CAJCA (Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_041379 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.0e-78
Identity = 143/167 (85.63%), Postives = 154/167 (92.22%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYR NAL+TFA TILA++CA+AS SD   SP+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRVNALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TrEMBL
Match: I1NC08_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G236500 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.0e-78
Identity = 142/167 (85.03%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+AS SD   +P+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MT+NISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTMNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TrEMBL
Match: C6SWM6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.3e-77
Identity = 141/167 (84.43%), Postives = 154/167 (92.22%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+T A TILA++CA+AS SD   +P+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTSAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MT+NISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTMNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TAIR10
Match: AT5G27430.1 (AT5G27430.1 Signal peptidase subunit)

HSP 1 Score: 275.8 bits (704), Expect = 1.8e-74
Identity = 129/167 (77.25%), Postives = 147/167 (88.02%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA ICA+ASFSD   + +P AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET KN+LNQ+SLWD+IIP K  AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+VM GYRLP  YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. TAIR10
Match: AT3G05230.1 (AT3G05230.1 Signal peptidase subunit)

HSP 1 Score: 264.2 bits (674), Expect = 5.3e-71
Identity = 124/167 (74.25%), Postives = 147/167 (88.02%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MH+FGYRANAL+TFA T LA ICA+ASFSD   + +P A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETPKNSLNQ+SLWD+IIP+K  AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFA+K+V+ GY LP  YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. NCBI nr
Match: gi|659070404|ref|XP_008454895.1| (PREDICTED: signal peptidase complex subunit 3B-like [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-83
Identity = 155/167 (92.81%), Postives = 160/167 (95.81%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICALASFSDTL SPSP AQVQVLSINWFQNQPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICALASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK  AKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPSNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFA+KLVM GYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. NCBI nr
Match: gi|449442841|ref|XP_004139189.1| (PREDICTED: signal peptidase complex subunit 3B [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 9.7e-83
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFG+RANAL+TFAATILA+ICA ASFSDTL SPSP AQVQVLSINWFQ QPNGNDEVS
Sbjct: 1   MHSFGFRANALLTFAATILAVICAFASFSDTLNSPSPTAQVQVLSINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETP NSLNQISLWD I+PSK  AKFQIHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPLNSLNQISLWDGIVPSKEIAKFQIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVM GYRLPQEYR
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. NCBI nr
Match: gi|1012360063|gb|KYP71247.1| (Signal peptidase complex subunit 3B [Cajanus cajan])

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 144/167 (86.23%), Postives = 155/167 (92.81%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL+TFA TILA++CA+AS SD   SP+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. NCBI nr
Match: gi|1012325530|gb|KYP37419.1| (Signal peptidase complex subunit 3B [Cajanus cajan])

HSP 1 Score: 299.3 bits (765), Expect = 4.2e-78
Identity = 143/167 (85.63%), Postives = 154/167 (92.22%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYR NAL+TFA TILA++CA+AS SD   SP+P AQVQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRVNALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQGSNLRGKE+NLT+HWHVMPKTGKMFA+K+VM GYRLPQEYR
Sbjct: 121 YRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of CmaCh12G010840.1 vs. NCBI nr
Match: gi|1012173492|ref|XP_015966335.1| (PREDICTED: signal peptidase complex subunit 3B-like [Arachis duranensis])

HSP 1 Score: 298.9 bits (764), Expect = 5.5e-78
Identity = 143/167 (85.63%), Postives = 154/167 (92.22%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPMAQVQVLSINWFQNQPNGNDEVS 60
           MHSFGYRANAL TFA TILA++CA+AS SD+L SPSP A VQVL+INWFQ QPNGNDEVS
Sbjct: 1   MHSFGYRANALFTFAITILALVCAMASLSDSLNSPSPSAHVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKASAKFQIHTSNK 120
           MT+NISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWD IIPSK  AKF IHTSNK
Sbjct: 61  MTMNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMFGYRLPQEYR 168
           YRF+DQG NLRGKEFNLT+HWHVMPKTGKMFA+K+VM GYRLP+EYR
Sbjct: 121 YRFIDQGRNLRGKEFNLTMHWHVMPKTGKMFADKIVMPGYRLPEEYR 167

The following BLAST results are available for this feature:

BLAST of CmaCh12G010840.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPC3B_ARATH	3.1e-73	77.25	Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV...	[more]
SPC3A_ARATH	9.5e-70	74.25	Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV...	[more]
SPCS3_ORYSJ	5.1e-31	44.58	Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica GN=O...	[more]
SPCS3_DICDI	4.9e-18	29.52	Signal peptidase complex subunit 3 OS=Dictyostelium discoideum GN=spcs3 PE=3 SV=...	[more]
SPCS3_CHICK	8.4e-18	35.57	Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1 SV=1	[more]

BLAST of CmaCh12G010840.1 vs. TrEMBL


Match Name	E-value	Identity	Description
Q84KA8_CUCME	1.0e-83	92.81	Signal peptidase protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A151TW12_CAJCA	1.0e-78	86.23	Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_010496 PE=4 SV=1	[more]
A0A151R4G4_CAJCA	3.0e-78	85.63	Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_041379 PE=4 SV=1	[more]
I1NC08_SOYBN	5.0e-78	85.03	Uncharacterized protein OS=Glycine max GN=GLYMA_19G236500 PE=4 SV=1	[more]
C6SWM6_SOYBN	4.3e-77	84.43	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of CmaCh12G010840.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27430.1	1.8e-74	77.25	Signal peptidase subunit	[more]
AT3G05230.1	5.3e-71	74.25	Signal peptidase subunit	[more]

BLAST of CmaCh12G010840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070404\|ref\|XP_008454895.1\|	1.5e-83	92.81	PREDICTED: signal peptidase complex subunit 3B-like [Cucumis melo]	[more]
gi\|449442841\|ref\|XP_004139189.1\|	9.7e-83	92.22	PREDICTED: signal peptidase complex subunit 3B [Cucumis sativus]	[more]
gi\|1012360063\|gb\|KYP71247.1\|	1.5e-78	86.23	Signal peptidase complex subunit 3B [Cajanus cajan]	[more]
gi\|1012325530\|gb\|KYP37419.1\|	4.2e-78	85.63	Signal peptidase complex subunit 3B [Cajanus cajan]	[more]
gi\|1012173492\|ref\|XP_015966335.1\|	5.5e-78	85.63	PREDICTED: signal peptidase complex subunit 3B-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007653	SPC3

Vocabulary: **Cellular Component**
Term	Definition
GO:0005787	signal peptidase complex
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006465	signal peptide processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0008233	peptidase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0008233	peptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G010840	CmaCh12G010840	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G010840.1	CmaCh12G010840.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G010840.1.three_prime_UTR.1	CmaCh12G010840.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G010840.1.CDS.6	CmaCh12G010840.1.CDS.6	CDS
CmaCh12G010840.1.CDS.5	CmaCh12G010840.1.CDS.5	CDS
CmaCh12G010840.1.CDS.4	CmaCh12G010840.1.CDS.4	CDS
CmaCh12G010840.1.CDS.3	CmaCh12G010840.1.CDS.3	CDS
CmaCh12G010840.1.CDS.2	CmaCh12G010840.1.CDS.2	CDS
CmaCh12G010840.1.CDS.1	CmaCh12G010840.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G010840.1.five_prime_UTR.1	CmaCh12G010840.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G010840.1.exon.6	CmaCh12G010840.1.exon.6	exon
CmaCh12G010840.1.exon.5	CmaCh12G010840.1.exon.5	exon
CmaCh12G010840.1.exon.4	CmaCh12G010840.1.exon.4	exon
CmaCh12G010840.1.exon.3	CmaCh12G010840.1.exon.3	exon
CmaCh12G010840.1.exon.2	CmaCh12G010840.1.exon.2	exon
CmaCh12G010840.1.exon.1	CmaCh12G010840.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007653	Signal peptidase 22kDa subunit	PIR	PIRSF016089	SPC3	coord: 1..167 score: 8.1
IPR007653	Signal peptidase 22kDa subunit	PANTHER	PTHR12804	MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23	coord: 2..167 score: 1.5
IPR007653	Signal peptidase 22kDa subunit	PFAM	PF04573	SPC22	coord: 6..164 score: 3.7