CmaCh12G006590.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006590.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glutamate receptor
Location	Cma_Chr12 : 3524107 .. 3525997 (+)
Sequence length	894

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTGATATTCCAGCAGACAGTTTATGTAAAAGAAGGCTGTTTCCATAGCCTCAAGCCAGTTTTCAGGTGCAATGGAGTCTATTTTGCCACCTTCAACGAAAGGCGGGTTTTGCCTCTAGAAGTCTTTAAGATAACAAGACTCCACAGTCATAGTCCCAGAGTCTCTGGTCTGTTGCAATTTTGTCTGTTGCATTGCTGTCTATTGTAATGTTGTCTATTGCATCGTTGCCTGTTGTATTGCTTGTTGCATTGTAGCCTGGTTAGTGACTTGTGTCTACATCATCTGAGTCTGGTTTTCCATAGAGGTTAACATGAATGTTTGTAGTACAGATCTGTAGTGAGGTTAGTTGTTGGCTGCCTAGGTGGAACCTCTACATTATTGGTAGACACCGGTGGGACTGCTTTAGGAGGAGGTGCAGTAGAGTCTGCGTCGGGTAATTCTTGAGTCATTGCTCTCTTTTGACTCATTCCTAACCTTGGTGCCCATGGTATAGGACACTTAAACCATTGGGGCATTTCATCAACCTCCTCTTGAGGTTCAGGTACAAGTTGTTCCACCTCAGGTGACGGGACATCAGTGTCCTGAGCGACTCTTCTTCTTCCCCTTCTAGGTCCAGGCCCGAGATAGGTTCTACACCTCTTTGGTGCCATTTAGCTACCACATTAGAAAATTTGCTGTTACAATTCATTCAAGGTTCAACCTCTAGGAAGTGTGCAGTACAATACAAGAAAACAGTCATGAAAAATTCTCTACTTAACAACTCAGCTCTTAATTTCGCAATTCAAATTCATGAGATTGTTTGGTTGCAAGCGGCACGTGATTGATGGGTGCATCACAGAGGATACGACACTCTAACCTAAGTGTCTACAAGACCTATGTCCTTTTGACCGATATTCTTAGGGGAGACTTTGATAAGCAATTTGGCGAGGTTCGTGGTGGTGGTATGGTTCTTTGTGGTGTTCGTTCTAACTCAGAGCTACACGACGAGCTTGACTTCTCTGTTGACAGTGCAACAATTACAACCCACCATTACAAATATAAATGAGCTTTTGACGAAGCAGTCATGGGTGAGATATCTAGAAGGTTCATTTGTTTGGAGGTTGTTGACCTCTGTGGGGATTAAGAATCTCAAGTCTTATAGGTCTCCTGAGGAACTCGACAAGTTGCTAAAACTAGGAGGCTCCAATGGCAGCATTGATGCTGCTTTTGATGAAACCCCTTACATCAAGCTCTTCCTGTCCAAGTTTCCTAATAAATACATTACCACTGATCCCACCTACAAAACTGATGGATTTGGGTCTGTAAGTCTCCCTTCTATGAAACTAATATAATATTTAACGAATCTTTTATAAATGTTTCAAAATTGTCACATAACCAATATTGTCACATCAGCTCTTTGAATCAATAATGTTATTTTCTCTTTTATACTATTTCATTTGTAGGTCGGTTAAAATTATGAATAGAACATTATATTATGGTAATCTATGTCTTATCTTTATATATTAATGATAGTTTAACATGATATTAGAGGGATTATTTTAATGTCGATTGATGATGCCGATAGGCATTTTCTATTGGCTCACCATTTGTGGCAGATATATCAAGAGCGGTGTTAAATGTGAAAGAGAGTGAGAAGATGAACCAATTACAAATAAAATGGTTTGGTGATCAAGGCAATTCCTGGTCTTCTATTCCAAAGGTCACCTCTTCAAGGCTGAGCCTGAGCAGCTTTCGAGGCCTATTCTTCATTGTCGGCACTGCTGCCTTCATCTCTGTCATCATCTACGTCTTCATTTTCCTTCACAAAGAACTGCACACGCTCCGTCACACCGCCCATGGAGGCTCCAACTCCTCCATTAGGAGTAAAATTCAAAGCAATACTTAA

mRNA sequence

ATGAACTTGATATTCCAGCAGACAGTTTATGTAAAAGAAGGCTGTTTCCATAGCCTCAAGCCAGTTTTCAGGTGCAATGGAGTCTATTTTGCCACCTTCAACGAAAGGCGGGTTTTGCCTCTAGAAGTCTTTAAGATAACAAGACTCCACAGTCATAGTCCCAGAGTCTCTGGGGAGACTTTGATAAGCAATTTGGCGAGGTTCGTGGTGGTGGTATGGTTCTTTGTGGTGTTCGTTCTAACTCAGAGCTACACGACGAGCTTGACTTCTCTGTTGACAGTGCAACAATTACAACCCACCATTACAAATATAAATGAGCTTTTGACGAAGCAGTCATGGGTGAGATATCTAGAAGGTTCATTTGTTTGGAGGTTGTTGACCTCTGTGGGGATTAAGAATCTCAAGTCTTATAGGTCTCCTGAGGAACTCGACAAGTTGCTAAAACTAGGAGGCTCCAATGGCAGCATTGATGCTGCTTTTGATGAAACCCCTTACATCAAGCTCTTCCTGTCCAAGTTTCCTAATAAATACATTACCACTGATCCCACCTACAAAACTGATGGATTTGGGTCTGCATTTTCTATTGGCTCACCATTTGTGGCAGATATATCAAGAGCGGTGTTAAATGTGAAAGAGAGTGAGAAGATGAACCAATTACAAATAAAATGGTTTGGTGATCAAGGCAATTCCTGGTCTTCTATTCCAAAGGTCACCTCTTCAAGGCTGAGCCTGAGCAGCTTTCGAGGCCTATTCTTCATTGTCGGCACTGCTGCCTTCATCTCTGTCATCATCTACGTCTTCATTTTCCTTCACAAAGAACTGCACACGCTCCGTCACACCGCCCATGGAGGCTCCAACTCCTCCATTAGGAGTAAAATTCAAAGCAATACTTAA

Coding sequence (CDS)

ATGAACTTGATATTCCAGCAGACAGTTTATGTAAAAGAAGGCTGTTTCCATAGCCTCAAGCCAGTTTTCAGGTGCAATGGAGTCTATTTTGCCACCTTCAACGAAAGGCGGGTTTTGCCTCTAGAAGTCTTTAAGATAACAAGACTCCACAGTCATAGTCCCAGAGTCTCTGGGGAGACTTTGATAAGCAATTTGGCGAGGTTCGTGGTGGTGGTATGGTTCTTTGTGGTGTTCGTTCTAACTCAGAGCTACACGACGAGCTTGACTTCTCTGTTGACAGTGCAACAATTACAACCCACCATTACAAATATAAATGAGCTTTTGACGAAGCAGTCATGGGTGAGATATCTAGAAGGTTCATTTGTTTGGAGGTTGTTGACCTCTGTGGGGATTAAGAATCTCAAGTCTTATAGGTCTCCTGAGGAACTCGACAAGTTGCTAAAACTAGGAGGCTCCAATGGCAGCATTGATGCTGCTTTTGATGAAACCCCTTACATCAAGCTCTTCCTGTCCAAGTTTCCTAATAAATACATTACCACTGATCCCACCTACAAAACTGATGGATTTGGGTCTGCATTTTCTATTGGCTCACCATTTGTGGCAGATATATCAAGAGCGGTGTTAAATGTGAAAGAGAGTGAGAAGATGAACCAATTACAAATAAAATGGTTTGGTGATCAAGGCAATTCCTGGTCTTCTATTCCAAAGGTCACCTCTTCAAGGCTGAGCCTGAGCAGCTTTCGAGGCCTATTCTTCATTGTCGGCACTGCTGCCTTCATCTCTGTCATCATCTACGTCTTCATTTTCCTTCACAAAGAACTGCACACGCTCCGTCACACCGCCCATGGAGGCTCCAACTCCTCCATTAGGAGTAAAATTCAAAGCAATACTTAA

Protein sequence

MNLIFQQTVYVKEGCFHSLKPVFRCNGVYFATFNERRVLPLEVFKITRLHSHSPRVSGETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLEGSFVWRLLTSVGIKNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQSNT

Homology

[Close]

BLAST of CmaCh12G006590.1 vs. Swiss-Prot
Match: GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.8e-48
Identity = 106/221 (47.96%), Postives = 147/221 (66.52%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVVVVW FVV VLTQSYT SLTS LTVQ LQPT+TN+N+L+  +  V Y  
Sbjct: 620 ENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVGYQG 679

Query: 119 GSFVWRLLTSVGIKN--LKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV  +L  +G     LK + S ++ D LL  G S G I AAFDE  Y+K  LS+  +K
Sbjct: 680 GAFVKDILLGLGFHEDQLKPFDSAKDADDLLSKGKSKG-IAAAFDEVAYLKAILSQSCSK 739

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y+  +PT+KT GFG AF   SP   + SRA+LN+ ++    Q++ +WF  + +    +  
Sbjct: 740 YVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTA 799

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTL 278
           ++S+RL+LSSF GLF I GTA   S++++V +FL++  HTL
Sbjct: 800 LSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLYEHRHTL 839

[Close]

BLAST of CmaCh12G006590.1 vs. Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 4.8e-48
Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVVVVW FVV VLTQSYT +LTS LTVQ+ QP   N+ +L+    +V Y  
Sbjct: 631 EKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDYVGYQH 690

Query: 119 GSFVWRLLTSVG--IKNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV   L   G  +  LK + S EE   LL    SNGSI AAFDE  Y++  LS++ +K
Sbjct: 691 GAFVKDFLIKEGFNVSKLKPFGSSEECHALL----SNGSISAAFDEVAYLRAILSQYCSK 750

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   +PT+KT GFG AF   SP   D+S+A+LNV + ++M  ++ KWF  Q +       
Sbjct: 751 YAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTA 810

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTL 278
           ++S+RLSL SF GLF I G A+F++++I+VF+FL++  HTL
Sbjct: 811 LSSNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYENRHTL 847

[Close]

BLAST of CmaCh12G006590.1 vs. Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-44
Identity = 108/238 (45.38%), Postives = 148/238 (62.18%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVV+VW FVV VL QSYT +LTS  TV+ LQPT+TN  +L+     + Y  
Sbjct: 636 EKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQR 695

Query: 119 GSFVWRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV  LL S G     LK + S  E D+L     SNG+I A+FDE  YIK+ LS+  +K
Sbjct: 696 GTFVRELLKSQGFDESQLKPFGSAVECDELF----SNGTITASFDEVAYIKVILSQNSSK 755

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   +P++KT GFG  F   SP   D+SRA+LNV + E+M  ++ KWF    N       
Sbjct: 756 YTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTS 815

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQ 295
           ++S+ LSLSSF GLF I G A+F++++I+V  FL++  HTL       S +S R K++
Sbjct: 816 LSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKHTL----FDDSENSFRGKLK 865

[Close]

BLAST of CmaCh12G006590.1 vs. Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 5.3e-39
Identity = 87/203 (42.86%), Postives = 127/203 (62.56%), Query Frame = 1


Query: 63  SNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLEGSFV 122
           S   R +VVVW FV+ +LTQSYT +LTS+LTVQ+L+PT+ ++++L      + Y  GSF 
Sbjct: 647 SIFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRNSGVNIGYQTGSFT 706

Query: 123 WRLLTSVGIK--NLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYITT 182
           +  L  +G K   LK+Y +P+E+ +L     SNG IDAAFDE  Y+KLF++K+ +KY   
Sbjct: 707 FERLKQMGYKESRLKTYDTPQEMHELFLKKSSNGGIDAAFDEVAYVKLFMAKYCSKYTII 766

Query: 183 DPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVTSS 242
           +PT+K DGFG AF +GSP V D+SR +LN+ E E M  ++ KW   + +   S    +  
Sbjct: 767 EPTFKADGFGFAFPLGSPLVPDLSRQILNITEGETMKAIENKWLLGEKHCLDSTTSDSPI 826

Query: 243 RLSLSSFRGLFFIVGTAAFISVI 264
           RL   SF  LF IV   + + ++
Sbjct: 827 RLDHHSFEALFTIVFVVSMLLLL 849

[Close]

BLAST of CmaCh12G006590.1 vs. Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 92/221 (41.63%), Postives = 134/221 (60.63%), Query Frame = 1


Query: 63  SNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLEGSFV 122
           S   R +VVVW FV+ +LTQSYT +LTS+LTVQ+L+PT+ ++++L      + Y  GSF 
Sbjct: 643 SFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGSFT 702

Query: 123 WRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYITT 182
           +  L  +      LK+Y SPEE+ +L     SNG IDAAFDE  YIKLF++K+ ++Y   
Sbjct: 703 FERLKQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSII 762

Query: 183 DPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVTSS 242
           +PT+K DGFG AF +GSP V+DISR +LN+ E + M  ++ KWF  + +   S    +  
Sbjct: 763 EPTFKADGFGFAFPLGSPLVSDISRQILNITEGDAMKAIENKWFLGEKHCLDSTTSDSPI 822

Query: 243 RLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTA 282
           +L   SF  LF IV     +SVI+ + +   +     +H A
Sbjct: 823 QLDHHSFEALFLIV---FVVSVILLLLMLASRGYQERQHNA 860

[Close]

BLAST of CmaCh12G006590.1 vs. TrEMBL
Match: B9ILD0_POPTR (Glutamate receptor OS=Populus trichocarpa GN=POPTR_0018s03310g PE=3 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 124/222 (55.86%), Postives = 158/222 (71.17%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E L+SNLAR VV++WFFVV VLTQSYT SLTSLLTVQQLQPT+T++++L+ K  +V YL+
Sbjct: 638 EKLVSNLARAVVIIWFFVVLVLTQSYTASLTSLLTVQQLQPTVTDVHDLIMKGGYVGYLK 697

Query: 119 GSFVWRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L  +G     L  Y SPEE  +L   G  NG I AAFDE PY+KLFLSK+  K
Sbjct: 698 GSFVREILLGLGFDESKLMMYNSPEECHELFSKGSGNGGIAAAFDEVPYMKLFLSKYCTK 757

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   DPT+KT GFG  F  GSP V DISRA+LNV E +KM Q++  WFG +G+   S   
Sbjct: 758 YTMIDPTFKTGGFGFVFPKGSPLVPDISRAILNVTEGDKMKQIEDAWFGKKGSCPDSSTS 817

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLR 279
           V+S+ LSL SF GLF I G AAF+++II++ +F+++E   LR
Sbjct: 818 VSSNILSLKSFWGLFLIAGLAAFLALIIFIAMFVYRERRDLR 859

[Close]

BLAST of CmaCh12G006590.1 vs. TrEMBL
Match: U5FJ15_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0017s09420g PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-57
Identity = 122/231 (52.81%), Postives = 162/231 (70.13%), Query Frame = 1


Query: 45  KITRLHSHSPRVSGETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNI 104
           K+T     S  ++GE ++SNL+R VV++W FVV +LTQSYT SLTSLLTVQQL+PT+T++
Sbjct: 554 KLTSSLFFSTMIAGEIVVSNLSRAVVLIWCFVVLILTQSYTASLTSLLTVQQLRPTVTDV 613

Query: 105 NELLTKQSWVRYLEGSFVWRLLTSVGIKNLKS--YRSPEELDKLLKLGGSNGSIDAAFDE 164
           +EL+ K  +V Y EGSFV  +L  +G    K   Y S E+ D LL  G  NG I AAFDE
Sbjct: 614 HELIKKGEYVGYQEGSFVLGILLDLGFDESKLIVYNSTEQCDDLLSKGSGNGGIAAAFDE 673

Query: 165 TPYIKLFLSKFPNKYITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIK 224
            PY++LFLSK+ +KY   DPT+KTDGFG AF  GSP V D+SRAVLN+ E +KM +++  
Sbjct: 674 VPYMRLFLSKYCSKYAMIDPTFKTDGFGFAFPKGSPLVPDVSRAVLNMTEGDKMKEIENA 733

Query: 225 WFGDQGNSWSSIPKVTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKE 274
           WFG Q N   S   VTS+ LSL SF GLF I G A+ +++II++ +F++KE
Sbjct: 734 WFGKQSNCPYSSTSVTSNSLSLKSFWGLFLIAGVASLLALIIFMVMFVYKE 784

[Close]

BLAST of CmaCh12G006590.1 vs. TrEMBL
Match: B9ILB8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0018s03210g PE=3 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 3.0e-57
Identity = 126/237 (53.16%), Postives = 165/237 (69.62%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           ET++SNL+R VV++W FVV +LTQSYT SLTSLLTVQQL+PT+T+++EL+ K  +V Y E
Sbjct: 507 ETVVSNLSRAVVIIWCFVVLILTQSYTASLTSLLTVQQLRPTVTDVHELIKKGEYVGYQE 566

Query: 119 GSFVWRLLTSVGIKNLKS--YRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L ++G    K   Y S E+ D LL  G  NG I AAFDE PY++LFLSK+ +K
Sbjct: 567 GSFVLGILLNLGFDKSKLIVYNSTEQCDDLLSKGSVNGGIAAAFDEVPYMRLFLSKYCSK 626

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   DPT+KT GFG AF  GSP V D+SRAVLN+ E +KM +++  WFG Q N   S   
Sbjct: 627 YAMIDPTFKTAGFGFAFPKGSPLVPDVSRAVLNMTEGDKMKEIENAWFGKQSNCPDSSNS 686

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKI 294
           VTS+ LSL SF GLF I G A+ +++II++F+F++KE   LR      S  SIR K+
Sbjct: 687 VTSNSLSLKSFWGLFLIAGVASLLALIIFMFMFVYKERKKLRPL---NSRISIRRKV 740

[Close]

BLAST of CmaCh12G006590.1 vs. TrEMBL
Match: U5FF27_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0018s002301g PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-57
Identity = 124/239 (51.88%), Postives = 165/239 (69.04%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           ET++SNL+R VV++W FVV +LTQSYT SL+SLLTV QL+PT+T+++EL+ K  +V Y E
Sbjct: 162 ETVVSNLSRVVVIIWCFVVLILTQSYTASLSSLLTVHQLRPTVTDVHELIKKGEYVGYQE 221

Query: 119 GSFVWRLLTSVGIKNLKS--YRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L  +G    K   Y + E+ D LL  G  NG I AAFDE PY +LFLSK+ +K
Sbjct: 222 GSFVKGILLDLGFDESKLIVYNTTEQWDDLLSKGSGNGGIAAAFDEVPYTRLFLSKYCSK 281

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   DPT+KTDGFG AF  GSP V D+SRAVLN+ E +KM +++  WFG Q N   S   
Sbjct: 282 YAVIDPTFKTDGFGFAFPKGSPLVPDVSRAVLNITEGDKMTKIESAWFGKQSNCPDSSTS 341

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQS 296
           VTS+ LSL SF GLF I G A+ +++II++ +F++KE   LR      S  SIRSK+++
Sbjct: 342 VTSNSLSLKSFWGLFLIAGVASLLALIIFMVMFVYKERKVLRPL---NSTISIRSKVRN 397

[Close]

BLAST of CmaCh12G006590.1 vs. TrEMBL
Match: A0A061GIB0_THECC (Glutamate receptor OS=Theobroma cacao GN=TCM_036854 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-55
Identity = 124/221 (56.11%), Postives = 155/221 (70.14%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVV+VW FVV VLTQSYT +LTSLLTV+QLQPT+T+INEL+ ++  V  L 
Sbjct: 644 EKVVSNLARFVVIVWCFVVLVLTQSYTANLTSLLTVEQLQPTVTDINELVKRRESVGLLN 703

Query: 119 GSFVWRLLTSVGIKN--LKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L  +  +N  LK Y SPEEL +L   G +NG I AA DE PYIKLFLSK+  K
Sbjct: 704 GSFVEGILLGLKFENFQLKIYNSPEELHELFTKGSANGGISAALDENPYIKLFLSKYCGK 763

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y T +PT+KT GFG AF  GSP VAD+SRA+LNV +S+KM Q++  W           P 
Sbjct: 764 YTTVEPTFKTAGFGFAFPKGSPLVADVSRAILNVTQSDKMEQIENFWLKKGTVCPDVDPS 823

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTL 278
           V+SS L L SF GLF I GTA+  ++IIY  +FLH++ H L
Sbjct: 824 VSSSSLGLESFWGLFLIAGTASMSALIIYSAMFLHEQRHVL 864

[Close]

BLAST of CmaCh12G006590.1 vs. TAIR10
Match: AT2G29100.1 (AT2G29100.1 glutamate receptor 2.9)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 106/221 (47.96%), Postives = 147/221 (66.52%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVVVVW FVV VLTQSYT SLTS LTVQ LQPT+TN+N+L+  +  V Y  
Sbjct: 620 ENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDCVGYQG 679

Query: 119 GSFVWRLLTSVGIKN--LKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV  +L  +G     LK + S ++ D LL  G S G I AAFDE  Y+K  LS+  +K
Sbjct: 680 GAFVKDILLGLGFHEDQLKPFDSAKDADDLLSKGKSKG-IAAAFDEVAYLKAILSQSCSK 739

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y+  +PT+KT GFG AF   SP   + SRA+LN+ ++    Q++ +WF  + +    +  
Sbjct: 740 YVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTA 799

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTL 278
           ++S+RL+LSSF GLF I GTA   S++++V +FL++  HTL
Sbjct: 800 LSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLYEHRHTL 839

[Close]

BLAST of CmaCh12G006590.1 vs. TAIR10
Match: AT2G29110.1 (AT2G29110.1 glutamate receptor 2.8)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVVVVW FVV VLTQSYT +LTS LTVQ+ QP   N+ +L+    +V Y  
Sbjct: 631 EKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDYVGYQH 690

Query: 119 GSFVWRLLTSVG--IKNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV   L   G  +  LK + S EE   LL    SNGSI AAFDE  Y++  LS++ +K
Sbjct: 691 GAFVKDFLIKEGFNVSKLKPFGSSEECHALL----SNGSISAAFDEVAYLRAILSQYCSK 750

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   +PT+KT GFG AF   SP   D+S+A+LNV + ++M  ++ KWF  Q +       
Sbjct: 751 YAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTA 810

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTL 278
           ++S+RLSL SF GLF I G A+F++++I+VF+FL++  HTL
Sbjct: 811 LSSNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYENRHTL 847

[Close]

BLAST of CmaCh12G006590.1 vs. TAIR10
Match: AT2G29120.1 (AT2G29120.1 glutamate receptor 2.7)

HSP 1 Score: 181.8 bits (460), Expect = 6.2e-46
Identity = 108/238 (45.38%), Postives = 148/238 (62.18%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNLARFVV+VW FVV VL QSYT +LTS  TV+ LQPT+TN  +L+     + Y  
Sbjct: 636 EKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQR 695

Query: 119 GSFVWRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           G+FV  LL S G     LK + S  E D+L     SNG+I A+FDE  YIK+ LS+  +K
Sbjct: 696 GTFVRELLKSQGFDESQLKPFGSAVECDELF----SNGTITASFDEVAYIKVILSQNSSK 755

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   +P++KT GFG  F   SP   D+SRA+LNV + E+M  ++ KWF    N       
Sbjct: 756 YTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTS 815

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQ 295
           ++S+ LSLSSF GLF I G A+F++++I+V  FL++  HTL       S +S R K++
Sbjct: 816 LSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKHTL----FDDSENSFRGKLK 865

[Close]

BLAST of CmaCh12G006590.1 vs. TAIR10
Match: AT5G11210.1 (AT5G11210.1 glutamate receptor 2.5)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 92/221 (41.63%), Postives = 134/221 (60.63%), Query Frame = 1


Query: 63  SNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLEGSFV 122
           S   R +VVVW FV+ +LTQSYT +LTS+LTVQ+L+PT+ ++++L      + Y  GSF 
Sbjct: 569 SFFTRVLVVVWCFVLLILTQSYTATLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGSFT 628

Query: 123 WRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYITT 182
           +  L  +      LK+Y SPEE+ +L     SNG IDAAFDE  YIKLF++K+ ++Y   
Sbjct: 629 FERLKQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSII 688

Query: 183 DPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVTSS 242
           +PT+K DGFG AF +GSP V+DISR +LN+ E + M  ++ KWF  + +   S    +  
Sbjct: 689 EPTFKADGFGFAFPLGSPLVSDISRQILNITEGDAMKAIENKWFLGEKHCLDSTTSDSPI 748

Query: 243 RLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTA 282
           +L   SF  LF IV     +SVI+ + +   +     +H A
Sbjct: 749 QLDHHSFEALFLIV---FVVSVILLLLMLASRGYQERQHNA 786

[Close]

BLAST of CmaCh12G006590.1 vs. TAIR10
Match: AT5G27100.1 (AT5G27100.1 glutamate receptor 2.1)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-39
Identity = 96/221 (43.44%), Postives = 127/221 (57.47%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++S  AR VV++W+F+V VLTQSYT SL SLLT Q L PT+TNIN LL K   V Y +
Sbjct: 628 ERVLSFWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINSLLAKGESVGY-Q 687

Query: 119 GSFVWRLLTSVGIK--NLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
            SF+   L   G    +L SY SPE  D LL  G + G + A   E PY+++FL ++ NK
Sbjct: 688 SSFILGRLRDSGFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEVPYVRIFLGQYCNK 747

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWF-------GDQGN 238
           Y      +K DG G  F IGSP VADISRA+L V+ES K NQL+  WF        D   
Sbjct: 748 YKMVQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLENAWFKPIDESCPDPLT 807

Query: 239 SWSSIPKVTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFL 271
           +    P V+  +L   SF  LF +      ++++ +V+ FL
Sbjct: 808 NPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLKFVYQFL 847

[Close]

BLAST of CmaCh12G006590.1 vs. NCBI nr
Match: gi|449453069|ref|XP_004144281.1| (PREDICTED: glutamate receptor 2.7 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 7.5e-86
Identity = 166/237 (70.04%), Postives = 194/237 (81.86%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E+L+SNLARFVVV+WFFVVF+LTQSYT SLTSLLTVQQLQPTIT++NELL  Q WV Y +
Sbjct: 636 ESLVSNLARFVVVIWFFVVFILTQSYTASLTSLLTVQQLQPTITDVNELLKNQPWVGYQD 695

Query: 119 GSFVWRLLTSVGIKNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYI 178
           GSFV+ LL SVGIKNL+ Y +P++LD++ K G SNG IDAAFDE PYIKLFL KFP+KYI
Sbjct: 696 GSFVFELLKSVGIKNLRPYDTPQQLDEMFKSGSSNGGIDAAFDEIPYIKLFLHKFPDKYI 755

Query: 179 TTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVT 238
             +P YKTDGFG AF IGSP V D+SRAVLNV ESEKMNQ+Q  WFGDQ NS SS  KVT
Sbjct: 756 MAEPNYKTDGFGFAFPIGSPLVGDVSRAVLNVTESEKMNQIQNTWFGDQCNSLSSGSKVT 815

Query: 239 SSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQS 296
           SSRLSL SF GLF I G+AA I++++Y FIF HKE HTL  TA  GSN+++R KI++
Sbjct: 816 SSRLSLGSFWGLFLIAGSAAIIALLVYGFIFFHKEQHTLHRTADQGSNNTVRDKIRA 872

[Close]

BLAST of CmaCh12G006590.1 vs. NCBI nr
Match: gi|659129865|ref|XP_008464886.1| (PREDICTED: glutamate receptor 2.9-like [Cucumis melo])

HSP 1 Score: 325.9 bits (834), Expect = 7.5e-86
Identity = 166/237 (70.04%), Postives = 195/237 (82.28%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E+L+SNLARFVVV+WFFVVF+LTQSYT SLTSLLTVQQLQPTIT++NELL  Q WV Y +
Sbjct: 664 ESLVSNLARFVVVIWFFVVFILTQSYTASLTSLLTVQQLQPTITDVNELLKNQPWVGYQD 723

Query: 119 GSFVWRLLTSVGIKNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNKYI 178
           GSFV+ LL SVGIKNL+ Y +PE+LD++ K G SNG IDAAFDE PY+KLFL KFP+KYI
Sbjct: 724 GSFVFELLKSVGIKNLRPYDTPEQLDEMFKSGSSNGGIDAAFDEIPYVKLFLFKFPDKYI 783

Query: 179 TTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPKVT 238
             +P YKTDGFG AF IGSP V D+SRAVLNV ESEKMN++Q  WFG Q NS SS  KVT
Sbjct: 784 MAEPNYKTDGFGFAFPIGSPLVGDVSRAVLNVTESEKMNRIQKTWFGGQCNSVSSGSKVT 843

Query: 239 SSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKIQS 296
           SSRL+L SF GLF I G+AA I++++Y FIF HKE HTLRHTA+ GSN+S R KI++
Sbjct: 844 SSRLNLGSFWGLFLIAGSAAIIALLVYGFIFFHKEQHTLRHTANEGSNNSFRHKIRA 900

[Close]

BLAST of CmaCh12G006590.1 vs. NCBI nr
Match: gi|566213998|ref|XP_002324375.2| (hypothetical protein POPTR_0018s03310g [Populus trichocarpa])

HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58
Identity = 124/222 (55.86%), Postives = 158/222 (71.17%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E L+SNLAR VV++WFFVV VLTQSYT SLTSLLTVQQLQPT+T++++L+ K  +V YL+
Sbjct: 638 EKLVSNLARAVVIIWFFVVLVLTQSYTASLTSLLTVQQLQPTVTDVHDLIMKGGYVGYLK 697

Query: 119 GSFVWRLLTSVGI--KNLKSYRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L  +G     L  Y SPEE  +L   G  NG I AAFDE PY+KLFLSK+  K
Sbjct: 698 GSFVREILLGLGFDESKLMMYNSPEECHELFSKGSGNGGIAAAFDEVPYMKLFLSKYCTK 757

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   DPT+KT GFG  F  GSP V DISRA+LNV E +KM Q++  WFG +G+   S   
Sbjct: 758 YTMIDPTFKTGGFGFVFPKGSPLVPDISRAILNVTEGDKMKQIEDAWFGKKGSCPDSSTS 817

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLR 279
           V+S+ LSL SF GLF I G AAF+++II++ +F+++E   LR
Sbjct: 818 VSSNILSLKSFWGLFLIAGLAAFLALIIFIAMFVYRERRDLR 859

[Close]

BLAST of CmaCh12G006590.1 vs. NCBI nr
Match: gi|566212401|ref|XP_006373183.1| (hypothetical protein POPTR_0017s09420g, partial [Populus trichocarpa])

HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57
Identity = 122/231 (52.81%), Postives = 162/231 (70.13%), Query Frame = 1


Query: 45  KITRLHSHSPRVSGETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNI 104
           K+T     S  ++GE ++SNL+R VV++W FVV +LTQSYT SLTSLLTVQQL+PT+T++
Sbjct: 554 KLTSSLFFSTMIAGEIVVSNLSRAVVLIWCFVVLILTQSYTASLTSLLTVQQLRPTVTDV 613

Query: 105 NELLTKQSWVRYLEGSFVWRLLTSVGIKNLKS--YRSPEELDKLLKLGGSNGSIDAAFDE 164
           +EL+ K  +V Y EGSFV  +L  +G    K   Y S E+ D LL  G  NG I AAFDE
Sbjct: 614 HELIKKGEYVGYQEGSFVLGILLDLGFDESKLIVYNSTEQCDDLLSKGSGNGGIAAAFDE 673

Query: 165 TPYIKLFLSKFPNKYITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIK 224
            PY++LFLSK+ +KY   DPT+KTDGFG AF  GSP V D+SRAVLN+ E +KM +++  
Sbjct: 674 VPYMRLFLSKYCSKYAMIDPTFKTDGFGFAFPKGSPLVPDVSRAVLNMTEGDKMKEIENA 733

Query: 225 WFGDQGNSWSSIPKVTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKE 274
           WFG Q N   S   VTS+ LSL SF GLF I G A+ +++II++ +F++KE
Sbjct: 734 WFGKQSNCPYSSTSVTSNSLSLKSFWGLFLIAGVASLLALIIFMVMFVYKE 784

[Close]

BLAST of CmaCh12G006590.1 vs. NCBI nr
Match: gi|743936936|ref|XP_011012861.1| (PREDICTED: glutamate receptor 2.8-like [Populus euphratica])

HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 125/237 (52.74%), Postives = 165/237 (69.62%), Query Frame = 1


Query: 59  ETLISNLARFVVVVWFFVVFVLTQSYTTSLTSLLTVQQLQPTITNINELLTKQSWVRYLE 118
           E ++SNL+R VV++W FVV +LTQSYT SLTSLLTVQQL+PT+T+++EL+ K ++V Y E
Sbjct: 650 EIVVSNLSRAVVIIWCFVVLILTQSYTASLTSLLTVQQLRPTVTDVHELIKKGAYVGYQE 709

Query: 119 GSFVWRLLTSVGIKNLKS--YRSPEELDKLLKLGGSNGSIDAAFDETPYIKLFLSKFPNK 178
           GSFV  +L  +G    K   Y S E+ D  L  G  NG I AAFDE PY++LFLSK+ +K
Sbjct: 710 GSFVLGILLDLGFDESKLIVYNSTEQCDDFLSKGSGNGGIAAAFDEVPYMRLFLSKYCSK 769

Query: 179 YITTDPTYKTDGFGSAFSIGSPFVADISRAVLNVKESEKMNQLQIKWFGDQGNSWSSIPK 238
           Y   DPT+KTDGFG AF  GSP V D+SRAVLN+ E +KM +++  WFG+Q N   S   
Sbjct: 770 YAMIDPTFKTDGFGFAFPRGSPLVPDVSRAVLNMTEGDKMKEIENAWFGNQSNCPDSSTS 829

Query: 239 VTSSRLSLSSFRGLFFIVGTAAFISVIIYVFIFLHKELHTLRHTAHGGSNSSIRSKI 294
           VTS+ LSL SF GLF I G A+ +++II+VF+F++KE    R      S  SIR+K+
Sbjct: 830 VTSNSLSLKSFWGLFLIAGVASLLALIIFVFMFVYKERKMSRLL---NSRISIRNKV 883

The following BLAST results are available for this feature:

BLAST of CmaCh12G006590.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLR29_ARATH	4.8e-48	47.96	Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1	[more]
GLR28_ARATH	4.8e-48	47.96	Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2	[more]
GLR27_ARATH	1.1e-44	45.38	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	[more]
GLR26_ARATH	5.3e-39	42.86	Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2	[more]
GLR25_ARATH	2.0e-38	41.63	Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2	[more]

BLAST of CmaCh12G006590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
B9ILD0_POPTR	1.6e-58	55.86	Glutamate receptor OS=Populus trichocarpa GN=POPTR_0018s03310g PE=3 SV=2	[more]
U5FJ15_POPTR	1.8e-57	52.81	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0017s09420g P...	[more]
B9ILB8_POPTR	3.0e-57	53.16	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0018s03210g P...	[more]
U5FF27_POPTR	5.1e-57	51.88	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0018s002301g ...	[more]
A0A061GIB0_THECC	1.3e-55	56.11	Glutamate receptor OS=Theobroma cacao GN=TCM_036854 PE=3 SV=1	[more]

BLAST of CmaCh12G006590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29100.1	2.7e-49	47.96	glutamate receptor 2.9	[more]
AT2G29110.1	2.7e-49	47.96	glutamate receptor 2.8	[more]
AT2G29120.1	6.2e-46	45.38	glutamate receptor 2.7	[more]
AT5G11210.1	1.1e-39	41.63	glutamate receptor 2.5	[more]
AT5G27100.1	2.5e-39	43.44	glutamate receptor 2.1	[more]

BLAST of CmaCh12G006590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453069\|ref\|XP_004144281.1\|	7.5e-86	70.04	PREDICTED: glutamate receptor 2.7 [Cucumis sativus]	[more]
gi\|659129865\|ref\|XP_008464886.1\|	7.5e-86	70.04	PREDICTED: glutamate receptor 2.9-like [Cucumis melo]	[more]
gi\|566213998\|ref\|XP_002324375.2\|	2.3e-58	55.86	hypothetical protein POPTR_0018s03310g [Populus trichocarpa]	[more]
gi\|566212401\|ref\|XP_006373183.1\|	2.5e-57	52.81	hypothetical protein POPTR_0017s09420g, partial [Populus trichocarpa]	[more]
gi\|743936936\|ref\|XP_011012861.1\|	3.3e-57	52.74	PREDICTED: glutamate receptor 2.8-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001320	Iontro_rcpt
IPR001638	Solute-binding_3/MltF_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0004970	ionotropic glutamate receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007268	chemical synaptic transmission
biological_process	GO:0006811	ion transport
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016020	membrane
molecular_function	GO:0004970	ionotropic glutamate receptor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G006590	CmaCh12G006590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G006590.1	CmaCh12G006590.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G006590.1.exon.1	CmaCh12G006590.1.exon.1	exon
CmaCh12G006590.1.exon.2	CmaCh12G006590.1.exon.2	exon
CmaCh12G006590.1.exon.3	CmaCh12G006590.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G006590.1.CDS.1	CmaCh12G006590.1.CDS.1	CDS
CmaCh12G006590.1.CDS.2	CmaCh12G006590.1.CDS.2	CDS
CmaCh12G006590.1.CDS.3	CmaCh12G006590.1.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001320	Ionotropic glutamate receptor	PFAM	PF00060	Lig_chan	coord: 59..257 score: 2.4
IPR001320	Ionotropic glutamate receptor	SMART	SM00079	GluR_14	coord: 43..226 score: 4.
IPR001638	Solute-binding protein family 3/N-terminal domain of MltF	PFAM	PF00497	SBP_bac_3	coord: 79..225 score: 7.
None	No IPR available	GENE3D	G3DSA:1.10.287.70		coord: 62..132 score: 3.3
None	No IPR available	GENE3D	G3DSA:3.40.190.10		coord: 183..225 score: 1.
None	No IPR available	PANTHER	PTHR18966	IONOTROPIC GLUTAMATE RECEPTOR	coord: 59..280 score: 1.0
None	No IPR available	PANTHER	PTHR18966:SF204	GLUTAMATE RECEPTOR 2.5-RELATED	coord: 59..280 score: 1.0
None	No IPR available	unknown	SSF53850	Periplasmic binding protein-like II	coord: 78..227 score: 1.41