CmaCh12G005790.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh12G005790.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr12 : 3025399 .. 3030624 (+)
Sequence length2702
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGAGAGTCAGCGATGGAAGAATAAGGGCTCCCTTCATTCTCGATCAACAACCGAGCCAACCCGAAGTCCCCAACTTTGGCAGTCATGTCTTCAGCCAAGAGAACATTACAAGGCTTCAAATCACAGTGAACAATGGGCACTTCAGAGCCATGGTGAAGGTACTCCAACACAGAACAAACATCAATGGCAATGTTCAGTCGCTCCAAAAACCCCAGCCCACTTCCATCCAAGTGACGCCTCTGCCCATGAATCCACTCCGCCAAGCTTCCATTACTCAAAAACTCATAAACCAGAGCTCTAAAATCCCTTCCTTCAAAGTCTATACTCGAGCACGACGTAATGAGCTTCACAAGCTTCCGATGCCGCACACTGCGCGAGGCCTCGCACTCCGCTAAAAAGCTCCTAATATACCCAGTTCGTTCAATGTTCAACACCTTGATTGCAACCACGCCATGTTCTTGATTCAGGTACCCCTTATAAACTGACCCAAAACTTCCCTTTCCCACTAATTTTTCATGGCTGAAATTTGCTGTGGCGGCTCGAATCTCAGCGTATGAGACCATGTCGTGTTGCCTTTTTAATTCATCTGTTGACAATGGTGTTCTTGGCTTTCTCTTGGTCAGATAAAACCAAGCTCCCAATGTAAAACAGAGTGCTAATGTTGAGAAGACGACTGTTAAAGTAATGATTTTAAATCTCTTTTCGTTGTGGGGTTTGTTATTTACACATACCGATGGCAAACAAAGCTTTGGATTTCCTTCTAAATAAACACTTGGGATTCTCTTTAAATCTCCACCTTCAAAAGCTACTCCTTCGAGGTCGTTAAATGAGAGATTCAACAACTGCAAAGCTGTTCGATTTTGGAGATTCCTAGGAATAGGACCTGTAAGTTTGTTCGAGGAAAGATCCAAAGCTCGCAATCCCAAAATATTTCCAAGACTACTCGGAATTTGACCTGAAAATTCGTTCTTCGCCATTATCAACACCTCCAAGCTCTTGCAGTCGCTGATCGAAGAAGGAATTTCGCCAGAGATCAGATTTTCAGAGATATCAATTTTCTCAACGTTTTTGAGGAACTTGATTTCTTCAGGTAAATTCCCACTAAGCATATTGTTGGAGAGATTCAAAATCATGCTCAAACTAGGAAAATTTAGAGCCTCTTTGGGTATTCCCCCACTAAGCTTATTGCTGGACAAATCCATTGCAAGCAAGTTTGTGAAGTTTCCAAAAGAATTGGGGATGTCCCCGACAAGGTTGTTTCCCGACAAATCAATATGGTTTAGTTTCCCAAGGCTTCCCAATGAGCTTGGAATTCTACCAAAGAGCTGATTTTGAGCCAAACCCAGTAATTGTAATTGCTCCAATTGGCCAATTTGAGGTGGGATTTCCCCAGATAGCTTGTTTTTGTTCAAATTCAGCAAAGTTAAGCTCCGAAGATTGCCAATTGAAGATGGAATATTCCCATATATTCGATTCCCTCCCATGTACAATCTTGAGAAGACTTTGGAAAGGTTTCCAATGGATTCAGGAATCACACCTTCTAAGTAGTTTTCATCAGCTGCTATGAAGGTGAGACGAGAGCTGTTGGTCAAAGACGAGATGAAACTAAGCCCATCTCGACCTGAGCTAACGATCTTGTTGTGTCCAATATAGTACATTTGAAGATCAGGCAAATTCTCCAATCCTGGTGGGATTTTGCCTTCGAAAAGGTTGTGAGCAAACCGTATAATTCTTATTTGGGTCATATTGTGCATTGATTCAGGGATTGTTCCTGAAAATCTATTGAAACAGAAGTTGAAGAACAAAAGATTTGGGAGGTTATCTCCAAAATCCTTGGGGAGTGTTCCATGGAGACGATTTGCAGCTAAGATCAAAGTAACCAAAGAAGACATGTTGTAAATGCTTGGGGGAACAAAGCCACTGAAATTATTAATGGATATCACCAAGTTCTTCAAATTTTGAAGACGACCCAATTCAGAAGGAATCGAACCACCAACTGAATTGGTCCCTAAATTTAAGGTTATGAGAGAAGACAGGTTCCCAAAAGATGGGGGAATTGTACCGTAGAGATGATTCTGTCCCAAGTTCAAAACTTTAAGCTTTGTTAATCTGCTGAGTTCTTCTGGAATTTGGCTTGTGATTCTGTTGGAAGTCAAGTCAAGAATCTCAAGCTCTGCCATTCCACTCATGTTGGAGGGGAGGGCACCTCTTATGTAATTGAAGCTCATATTAAGAACTTTCAAGCGAGAAAGATTGCTAATTTGAACAGGAATTTGACCTGTTATTTGGTTATTTTGAAGTTGAAGAGATTTGAGGAACAAAAGATTGCCAATTTGAATATGTACAGACCCTGCAAGCGCCAGCCCAGAAAGATCGAGGCCGATGACTCTTTTTCCATCTTTATCGCAGGAAACGCCTGTCCAATTACATGGCGATGAGTTTTGATTCCATGAAGATAAAGGGTGGTGAAGATGGAGAGGATTGAATCCTGACTTGAGGGAGGTTAAAGCTTGCTTGTCTGATTCAAGGGTCGAGATGGATGATCCAAGAGAAGCTGCAAAAGCTAAAATGAAAACACAAAAGAAGTGGATCATGTGTGGAGGAGGAGGAGAATCTGCCATTTTGATTGAAGAGGAATACTTGGTATGCGTTCTTTGATATTATAACTCTTGTTGTTTGTTTGAAATGTTATCTTTAGACTTTTTTCTATCTGTCAGTCCTTGAATTTGGTGAGATGAAAATATTGATAATTCAGCATGTTTACACTTCTATATGCTTATAGTTGTTGGGAAGTCATTTCAATATGAAGAATGCGCATATCGCTGTCTTTTTCAGTTGGAAGTTTGCTTGTGCTTATGGTTCATGCACCATTGATGGAGTCAAATTTGTTGTCTAAGAGTATATACAATTGTGAAATCTCACGTTGATTGGAGAGAGGAACGAGTGCCAACGAGGGCGCTGGGCTCCGGAGGGGGTAGATTATGAGATTCCACATCGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCTTAGTAGACGTGTTTTAAGAACCTTGAGGGGTAGCCCAAAAGGAAAAGTCAAAAGAAGACAATATTTGCTAGCGGTGGGCTTGAACTGTTACAAATAGTATTAGAGCCAGACACTGGGTGGTGTGCCAGCTAGGACGTTGAGCCCCAAAGGGGGTGGAGTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAATATTTTTTTTTAAGGGTGTGGAAATCTTTCCTTAGCAGACGCGTTTTAAAAACCTTTAGCGGAAGCCTAAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGAGCTTAGACTGTTATAAATGGTATCAGAGCCAGACATCAGGCTATGTGCCAACGAGGAAGCTGAGCCCAGAAAGGGGGTGGACACCAGTCGATGTGCCAATGAGGACGTGAGCCCAGAAGGAGGGTGGACAGTGGGCTGTGTGCCAGCAAGGACGTTGGGCTCCGAAGAGGGGTGGATTGTGAAATCCCACATCAGTGGAGAGGAGAACAAAACATTTCTTGTAAGGATGTGTGACACATTTTAAAAACCTTGAGGGAAAGCCCAAAAGAGAAAGTTCGAAGAAGACAATATATACTAGTAGTGGGTTTGGACTGTTACAAATGGTATAAGAGCCAGACACCGGGTGGTGTGCTAGCGAGGACATTGAGCCTTGAAGGAGGGTGGATACCGGGCGGTATGTTAGCAGGATGCTAAGCCCCAAAAGGGGTGGATACAGAGCAGTGTGCAAACGAGGACGTTGCATCCCGAAAGGGGGTGGACACTGAGCAATGTGCCTTGGGCCTCGAAAGGGAGTGGACACCCAACGGTGTGCTGGCAAGGACGCTCTGCCCCAAAGGAGAGTGGATTGATTGGAGAGAGGAATGAGTGCTAACTAGGACACTCGGCCTCCTATAAAATTTGTTAAAAGAGCTGAAGTGTCATTTGTTAAAACCAATCTACAAGTGCTTATGTTTATTAGTTGTACAAGAAAATATCAACACTACCACTGTTTTATACTCTCAAATCCTTGCAATGACTGTCCCCAATATCATCAGCAACAAATGGATGCTTTTACTCATCGTTCCCATCTGAATGACGGATAAGAGTGGCTCTTATCGTCTTGAGCTTTACAAACACATCTTTCATGCTAATGCGTTTTTCAGGCGAATTTGCAGTGCAAGAGAGTCCAACACCCATGACATCAACCAGACAATCATACTGTTTTCTTGGGTTAATCTCTTGTTCTTCATAGTATAAGTTGAATCGTGATTCTAACAGCGCAGCGTCCACTATTTCATCCATGTTCTTTGGATAACCCAACTCAACCCATTTCATCAAGTTCAGCTCTCCTGAAAAGCTTTCGTCAGTTGGACGTTTCCCTGTAAAAAGCTCCACCAATGTCACCCCAAAACTGTACACATCTCCAGCTGTTGTAGGCTTTCTTCCCAGTCCATACTCTGCAAAACCAGAAAGCTTACTTAGTTTCGAAAACCCTTTAAAGGATGAGTTTTCTTTTTGAATAAAACACAAAACTTTAACGTTCACAAACCTGGAGGAACATAGCCAATGGAACCCTTTAAGACACGACTCGAAGTAATGGAAGCAGACTGGTTGGTTCCACCTTCCATCAGAAAACGAGCTAACCCGAAATCCCCAACTTTTGCAATCATGTCTTCCGACAGAATAATGTTGCTGGGCTTTAAATCGCAGTGGACAATCGGAACGTCATAGCCATTGTGGAGGTAATCCAACGCAGAAGCAACGTCAATGGCAATGTTCAATCTCTCCAGTAAGTTTAGCCCACTTCCATCTTCATGAAGTTTATGCTTATGAATCCATGAATCCAAGCTTCCATTGCTTAAAAACTCATAAACCAAAGCAAGAAACTCCTGCTGCTTCAAGTCTATGCTGGAGCATGATGTGATTAGCTTAACAAGATTTCGATGTCTCACATGTCTTAGAGCCTCACACTCAGCAAGAAAGCTCCTCACAGAACCAGCTCTCTCTGTGTTAAACACCTTGACTGCAATACCAATCCCCTGTTCCAAACAGCCTCTGTAGACTGTCCCAAAGCTTCCTTTCCCAATCATATTTTCTGGGCTGAAATTATCCGTTGCCAAACAAAGCTCACGATGGGATATCATCTCAGGCTTCCCCTTTACCCATTCAGTTGA

mRNA sequence

CATGAGAGTCAGCGATGGAAGAATAAGGGCTCCCTTCATTCTCGATCAACAACCGAGCCAACCCGAAGTCCCCAACTTTGGCAGTCATGTCTTCAGCCAAGAGAACATTACAAGGCTTCAAATCACAGTGAACAATGGGCACTTCAGAGCCATGGTGAAGGTACTCCAACACAGAACAAACATCAATGGCAATGTTCAGTCGCTCCAAAAACCCCAGCCCACTTCCATCCAAGTGACGCCTCTGCCCATGAATCCACTCCGCCAAGCTTCCATTACTCAAAAACTCATAAACCAGAGCTCTAAAATCCCTTCCTTCAAAGTCTATACTCGAGCACGACGTAATGAGCTTCACAAGCTTCCGATGCCGCACACTGCGCGAGGCCTCGCACTCCGCTAAAAAGCTCCTAATATACCCAGTTCGTTCAATGTTCAACACCTTGATTGCAACCACGCCATGTTCTTGATTCAGATAAAACCAAGCTCCCAATGTAAAACAGAGTGCTAATGTTGAGAAGACGACTGTTAAAGTAATGATTTTAAATCTCTTTTCGTTGTGGGGTTTGTTATTTACACATACCGATGGCAAACAAAGCTTTGGATTTCCTTCTAAATAAACACTTGGGATTCTCTTTAAATCTCCACCTTCAAAAGCTACTCCTTCGAGGTCGTTAAATGAGAGATTCAACAACTGCAAAGCTGTTCGATTTTGGAGATTCCTAGGAATAGGACCTGTAAGTTTGTTCGAGGAAAGATCCAAAGCTCGCAATCCCAAAATATTTCCAAGACTACTCGGAATTTGACCTGAAAATTCGTTCTTCGCCATTATCAACACCTCCAAGCTCTTGCAGTCGCTGATCGAAGAAGGAATTTCGCCAGAGATCAGATTTTCAGAGATATCAATTTTCTCAACGTTTTTGAGGAACTTGATTTCTTCAGGTAAATTCCCACTAAGCATATTGTTGGAGAGATTCAAAATCATGCTCAAACTAGGAAAATTTAGAGCCTCTTTGGGTATTCCCCCACTAAGCTTATTGCTGGACAAATCCATTGCAAGCAAGTTTGTGAAGTTTCCAAAAGAATTGGGGATGTCCCCGACAAGGTTGTTTCCCGACAAATCAATATGGTTTAGTTTCCCAAGGCTTCCCAATGAGCTTGGAATTCTACCAAAGAGCTGATTTTGAGCCAAACCCAGTAATTGTAATTGCTCCAATTGGCCAATTTGAGGTGGGATTTCCCCAGATAGCTTGTTTTTGTTCAAATTCAGCAAAGTTAAGCTCCGAAGATTGCCAATTGAAGATGGAATATTCCCATATATTCGATTCCCTCCCATGTACAATCTTGAGAAGACTTTGGAAAGGTTTCCAATGGATTCAGGAATCACACCTTCTAAGTAGTTTTCATCAGCTGCTATGAAGGTGAGACGAGAGCTGTTGGTCAAAGACGAGATGAAACTAAGCCCATCTCGACCTGAGCTAACGATCTTGTTGTGTCCAATATAGTACATTTGAAGATCAGGCAAATTCTCCAATCCTGGTGGGATTTTGCCTTCGAAAAGGTTGTGAGCAAACCGTATAATTCTTATTTGGGTCATATTGTGCATTGATTCAGGGATTGTTCCTGAAAATCTATTGAAACAGAAGTTGAAGAACAAAAGATTTGGGAGGTTATCTCCAAAATCCTTGGGGAGTGTTCCATGGAGACGATTTGCAGCTAAGATCAAAGTAACCAAAGAAGACATGTTGTAAATGCTTGGGGGAACAAAGCCACTGAAATTATTAATGGATATCACCAAGTTCTTCAAATTTTGAAGACGACCCAATTCAGAAGGAATCGAACCACCAACTGAATTGGTCCCTAAATTTAAGGTTATGAGAGAAGACAGGTTCCCAAAAGATGGGGGAATTGTACCGTAGAGATGATTCTGTCCCAAGTTCAAAACTTTAAGCTTTGTTAATCTGCTGAGTTCTTCTGGAATTTGGCTTGTGATTCTGTTGGAAGTCAAGTCAAGAATCTCAAGCTCTGCCATTCCACTCATGTTGGAGGGGAGGGCACCTCTTATGTAATTGAAGCTCATATTAAGAACTTTCAAGCGAGAAAGATTGCTAATTTGAACAGGAATTTGACCTGTTATTTGGTTATTTTGAAGTTGAAGAGATTTGAGGAACAAAAGATTGCCAATTTGAATATGTACAGACCCTGCAAGCGCCAGCCCAGAAAGATCGAGGCCGATGACTCTTTTTCCATCTTTATCGCAGGAAACGCCTGTCCAATTACATGGCGATGAGTTTTGATTCCATGAAGATAAAGGGTGGTGAAGATGGAGAGGATTGAATCCTGACTTGAGGGAGGTTAAAGCTTGCTTGTCTGATTCAAGGGTCGAGATGGATGATCCAAGAGAAGCTGCAAAAGCTAAAATGAAAACACAAAAGAAGTGGATCATGTGTGGAGGAGGAGGAGAATCTGCCATTTTGATTGAAGAGGAATACTTGAGCCTCACACTCAGCAAGAAAGCTCCTCACAGAACCAGCTCTCTCTGTGTTAAACACCTTGACTGCAATACCAATCCCCTGTTCCAAACAGCCTCTGTAGACTGTCCCAAAGCTTCCTTTCCCAATCATATTTTCTGGGCTGAAATTATCCGTTGCCAAACAAAGCTCACGATGGGATATCATCTCAGGCTTCCCCTTTACCCATTCAGTTGA

Coding sequence (CDS)

ATGGATGATCCAAGAGAAGCTGCAAAAGCTAAAATGAAAACACAAAAGAAGTGGATCATGTGTGGAGGAGGAGGAGAATCTGCCATTTTGATTGAAGAGGAATACTTGAGCCTCACACTCAGCAAGAAAGCTCCTCACAGAACCAGCTCTCTCTGTGTTAAACACCTTGACTGCAATACCAATCCCCTGTTCCAAACAGCCTCTGTAGACTGTCCCAAAGCTTCCTTTCCCAATCATATTTTCTGGGCTGAAATTATCCGTTGCCAAACAAAGCTCACGATGGGATATCATCTCAGGCTTCCCCTTTACCCATTCAGTTGA

Protein sequence

MDDPREAAKAKMKTQKKWIMCGGGGESAILIEEEYLSLTLSKKAPHRTSSLCVKHLDCNTNPLFQTASVDCPKASFPNHIFWAEIIRCQTKLTMGYHLRLPLYPFS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh12G005790CmaCh12G005790gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh12G005790.1CmaCh12G005790.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G005790.1.exon.1CmaCh12G005790.1.exon.1exon
CmaCh12G005790.1.exon.2CmaCh12G005790.1.exon.2exon
CmaCh12G005790.1.exon.3CmaCh12G005790.1.exon.3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G005790.1.five_prime_UTR.1CmaCh12G005790.1.five_prime_UTR.1five_prime_UTR
CmaCh12G005790.1.five_prime_UTR.2CmaCh12G005790.1.five_prime_UTR.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh12G005790.1.CDS.1CmaCh12G005790.1.CDS.1CDS
CmaCh12G005790.1.CDS.2CmaCh12G005790.1.CDS.2CDS