CmaCh12G005250.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCTTACAAGAAAACCACTCTCATCATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACCTCTATACGGATAATGATTCTCGAAGTGGTTAGTGTTTGAGCTAGTTTCCTTTTCATTTTTTCTGTTGTTGATTCGTGTTGAAGATTATTGAGCAATGTTTAACATTGTATTTATTCCGTCTATTTTCTTTATTCTGAGCTAGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGGGCCTCTAAGCCAGTAGAGCTCATTAAATTTGTAAGACTCCAACATGATTTGAGGAGCTTTGTTTGTTCAATTTACCGTGAGATAGATCTGTTTTAGGAGAACTTATATTTGTTTGGTGAATATCACTCTTTTGGTGTAAAGGTTAAGGAGCTTAAAGAATTCTCCCAAGAAGAAACGGTGAATGAATTGCCTCAACCATTGAAACAGAAGATAACTGAGGAAATTCTTCTGAAATTGAGAAGCTCAAATACTAGCTCCAACAGTACTCAGCAGAGAGGTCAGCACCGTCTGATAATTTCCTTGCAATATCTATCGCCTAGAATTCTCACTGCTTAGAGGGCAAAGATATTGGATAGCAATTACTTCAAGCATTTGATTGGTTAACCCTTCTCTTAGATTCGATCGATCATAGACTAACACGTTTTCTTGTTTGTTCATTTTTCACAAAAGAAGTTTGATATCAATATTCTGATAAAATTTAAGTTAGCAAGTATTGTTATTTTGGCCTGTGTTATGCCTAAATACCATGGTTATCATTTTTCATGACAAGACTGTATGGCATTAGTGTGACTCGAGTCAAATCCAAAGAGACTATATGTCAGCTGCATCACTTTGGAGAGGGAATTTATTTTTTCTTAGATAACTGTGTCTTGATATCTAAAACTATAAGATTGTTTTCTATAGTTATGTAGCATACTAGTTGGCTAGAGTTCATTTACAATTAAATTTGGTGTAGAGTTGCCATTGATTTGACACTGATTACTTGTTGAATTGAATGTATTAGATTCGCTGTGGTCACAATGATGTTGTTGCTGCTTTACATAACATGTAAACTGCCACATAATATGGTCATAATTTTGGAAGTTAGTTTGTACCTTGGTTTCATAGATGTCAACCTGCTCTACCTTTTTTTTCTTTTTTCTCAACACTAATACTTCACTAGAACACTATAGATTTAAGAAGTATGAATATAGATACAAGACACGGATGCAACACCACACAGACGTGGTATATGTCATCTTGTAAAAATCTAGGAAGTGAGCTTGGCAAGGGCATGTTTATTAAAATTTACATTTTTTAAAATACATACCAATTTTATACCAGAAGAAAATTTGACGTTGATAAGTTAATGCATTTATTTTCTTAAAAAAATGAGTTTGGTGTATTTCACTCTCAAAAGTCTATTATTTTTGTCCTAGATTATTATGTATCTATTTAGTATACTTAACAATTGATGGATATAACAAATGTTGGACCTATTTTGGATTTGTATAACTAGTGTTCTTTTTTATTGTATTCAACCAACTTCATTCAGACAAACCATTAGATTACTAATGGCATGATCTTGCTCGATTCCATTTCAATTCTTTACTACCTCCTCGAAGAAATTTTTATTTTCTCGACTCTATTGCTTTTGCATCTTTTTGTGAATAAAAATAGTATGCACATGCCATGTTCGTGCAGGTTTCTTTTGGTCAAATATTTTTTAGTGTGCATCATTTGTAGATAAGTTAAAATCTTTGTATTCCTTGAAAAGAAACAAAAGTATATGCATCCACAGGAAGACTGAAGTGAAAAGTTTACTTGTTAAAATAACCTCTCAATCATAGTTATAGAATAACTTCAAAACAATTTTGGAAAAAACTGAAGTGAGAAAAAGGAACTGGAGAAACGAGGTCTCGATACTCATGAGGAGAAACCTCCCTTCTATTGAAAATGCGACTGTTCCTTTTCAACCCAATTTCCTTAGAAATAGCTTCTAGGATCAGTTATCCATAAGATCATGCTCCTCTCTAAAACGGTGAACATATAATAATTGATTAATGAAAACCTTTAAATTTCCAAGCTGTGGAAACTGATTGCTGAACAGTTTGAAGAAGCCTCCTACAAAAACTGCAAACTAAGGAGTATTCTGAAAAGAAGCAAATCTTTTAGCGAACCACATTCTTTTCTGACCTTTTAACCTAATGCTGCAATTGGTTAATGATTCAAAGAGGAAAACTGGGTTTGCATTCACTAACATATTTGCATGTTTCCTTTCAAAAAAAAAAATGAAAGGTTTTCTTTGGACCCCTTTTTGGCGATGGGGATGTGTGTGTGTTGGAGGGGTTGGTTGGGGAGACCTTTCTAAAGGGTCTCTCAAGTTAGATATTTCTCGAGTTACTGGATTAAATATAATTTGAAGCTCGTACCAAGTGTATCGACCTATATAGCATATAGAATTATAAAGTAACAATTCCTATATTATAACAATAACGACAATAATATAGTTTATCCCAATGGGATTAGATTCTTATTTATTAATAACCATTGTGGTACACCACATTAATCATTAGTTGCCAAAACAATATATTTCTGCGCTTCCCCCTGGCTGTCTTCATAGACATCAAAAATGTGTTGGATATTCTCCAATCTGCTTACACGTATTCATTATTGCAACTAAAGTTTAAAGGTGAGTAAAGTGTGCAATTTATGCTTCATGAATAATCTGCTATCTTGCCAAAATTTCTGTAGATCTTTCTAAGTTCAAGAGATTTAATATCCTGCAAGAATATTTCTTGTTATAATCTTCCGCTCAAATGACCAGAAGCAGTAGAAAGCTGGAGAAAGGAAAAGTTGGAAGAAGCAAGGAAGTTAATCACAGAACAAACTATTGAAAATTCAACTCTTTCTTCTGAAGAAGCTGGTATGGAAGTTCTGTAACAGTGTAGCTTTTTCTTTTTTGTTATATTGTGCTAGAAAGTCATACCTGAGATGCAGACCTGTGAAAGACACCCGATAACCTCGTTGGACCGATGCCAATAAACTTTTTTCCTATTCTGGTAGGGATTCTAGTAAAAGCCTTGGAGACTGATTGGGCAGTACTGGCTGAAGAAATTGGTGTGTGGATACCAGCGGAGATCTTCAACAGGGAGCATGATGATAAGCCTGAAGACGCAGATGAATTCGGTAAATTTTTGTGACTCCCTAGAGCGACATTTTGTGCACCGTATTTATTGATTTTGTCTAGCTAAAATCTCAGTTTATATTTCACTAAAATGTTCATTCCCCCGCTTTATGCAGATGGTGAAGTTTTACCTGGCAGGCCACTTCCACCTGAATGTAACGCCGAGCTCCATACAGATTACGGTGGTGCTGCTGTAAGATGGGGCCTAACACATCATAAACAAAGTGCAGCGGATTGCTGTCAGGCTTGCTTGGATCATGTGAAACGAGCGCAACCAGGTGGACGAAAATGCAATATCTGGGTTTACTGTCCATCCGAGACTGGATGCCACTCTCCTGATATCTATGAGCATAAATATATGGAGTGCTGGCTGAAATATGTAAGCTCCAAACTGTTTTTGTGATGGTAAATCTCTTTTGTAGGCTCACTTGAATCTAACTTTTCAAATCTTCAAATTCAAATGCAGGCAGAAACTCCAAAACTGAATTTCAAGACCAACTATCCCCAATCTTACAGAAACTCACACCCGACCGCCCCGCTGGTCGTCCCTTGGGTCTCTGGTGTTATTAGTGTTTAATTGTACGACAAATCAGGCAAGAAACTTCCACTACAATGATTGTGACTTCCCTTGTCTTTCTTACATTTGAGCATCATTGTCCATAGAGTTGTATGAATGTTCTGTTTGATTCATATCTGGCTTACTTTCATGTAACACGGGTTTTGGCGAACTTGGTGCCACCACTTCATATCGACGAGTCGAGGGCCGAGAGGTGATGGAGGTAACATGAAAAAGAAAGGCTACTTTTTTGCTAATAACATTGGAATTGATTTATTATGCTCAGGATGCCAATTTCTTAGCTCTGAGCTTACTCTCCAATGTATTTAGGGTATATGATGAGGCTCCAAATGTTTGGAAAAGCACCACCACTAATCAACATTGATGTTTCAGATAATGGCATAAGCATTTGTTTAGGTTTAATATCTGTATAGCGACCAAAAATTTTGGGTTGTGATATTTTTTAAACCCGACCAAAAGGTGGAGAGTTGTAAAGAGTCGATAAAAGTACGCTACTTTCGTAAAACGTATATTTATTTAGTTTCAAACTTCTAATAAATATTTGCCATTCAAAGT ATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCTTACAAGAAAACCACTCTCATCATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACCTCTATACGGATAATGATTCTCGAAGTGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGGGCCTCTAAGCCAGTAGAGCTCATTAAATTTGTTAAGGAGCTTAAAGAATTCTCCCAAGAAGAAACGGTGAATGAATTGCCTCAACCATTGAAACAGAAGATAACTGAGGAAATTCTTCTGAAATTGAGAAGCTCAAATACTAGCTCCAACAGTACTCAGCAGAGAGAAGCAGTAGAAAGCTGGAGAAAGGAAAAGTTGGAAGAAGCAAGGAAGTTAATCACAGAACAAACTATTGAAAATTCAACTCTTTCTTCTGAAGAAGCTGGGATTCTAGTAAAAGCCTTGGAGACTGATTGGGCAGTACTGGCTGAAGAAATTGGTGTGTGGATACCAGCGGAGATCTTCAACAGGGAGCATGATGATAAGCCTGAAGACGCAGATGAATTCGATGGTGAAGTTTTACCTGGCAGGCCACTTCCACCTGAATGTAACGCCGAGCTCCATACAGATTACGGTGGTGCTGCTGTAAGATGGGGCCTAACACATCATAAACAAAGTGCAGCGGATTGCTGTCAGGCTTGCTTGGATCATGTGAAACGAGCGCAACCAGGTGGACGAAAATGCAATATCTGGGTTTACTGTCCATCCGAGACTGGATGCCACTCTCCTGATATCTATGAGCATAAATATATGGAGTGCTGGCTGAAATATGCAGAAACTCCAAAACTGAATTTCAAGACCAACTATCCCCAATCTTACAGAAACTCACACCCGACCGCCCCGCTGGTCGTCCCTTGGGTCTCTGGTGTTATTAGTGTTTAATTGTACGACAAATCAGGCAAGAAACTTCCACTACAATGATTGTGACTTCCCTTGTCTTTCTTACATTTGAGCATCATTGTCCATAGAGTTGTATGAATGTTCTGTTTGATTCATATCTGGCTTACTTTCATGTAACACGGGTTTTGGCGAACTTGGTGCCACCACTTCATATCGACGAGTCGAGGGCCGAGAGGTGATGGAGGGTATATGATGAGGCTCCAAATGTTTGGAAAAGCACCACCACTAATCAACATTGATGTTTCAGATAATGGCATAAGCATTTGTTTAGGTTTAATATCTGTATAGCGACCAAAAATTTTGGGTTGTGATATTTTTTAAACCCGACCAAAAGGTGGAGAGTTGTAAAGAGTCGATAAAAGTACGCTACTTTCGTAAAACGTATATTTATTTAGTTTCAAACTTCTAATAAATATTTGCCATTCAAAGT ATGGCGAAGGTAGAGTGGGGTTATCAAGGAAGAGGTAAATTGGCGTTTTCTTACAAGAAAACCACTCTCATCATTTGCTCTATCAACATTATCGTTGCTCTCTATGTTCTTCGATCTCTATATGCTTCTCTCTACCTCTATACGGATAATGATTCTCGAAGTGTTGTAAAGTACACTCCGGATCAGATTAGGAAAATGGAACAGTTTATTCGGATTCGTCGGGCCTCTAAGCCAGTAGAGCTCATTAAATTTGTTAAGGAGCTTAAAGAATTCTCCCAAGAAGAAACGGTGAATGAATTGCCTCAACCATTGAAACAGAAGATAACTGAGGAAATTCTTCTGAAATTGAGAAGCTCAAATACTAGCTCCAACAGTACTCAGCAGAGAGAAGCAGTAGAAAGCTGGAGAAAGGAAAAGTTGGAAGAAGCAAGGAAGTTAATCACAGAACAAACTATTGAAAATTCAACTCTTTCTTCTGAAGAAGCTGGGATTCTAGTAAAAGCCTTGGAGACTGATTGGGCAGTACTGGCTGAAGAAATTGGTGTGTGGATACCAGCGGAGATCTTCAACAGGGAGCATGATGATAAGCCTGAAGACGCAGATGAATTCGATGGTGAAGTTTTACCTGGCAGGCCACTTCCACCTGAATGTAACGCCGAGCTCCATACAGATTACGGTGGTGCTGCTGTAAGATGGGGCCTAACACATCATAAACAAAGTGCAGCGGATTGCTGTCAGGCTTGCTTGGATCATGTGAAACGAGCGCAACCAGGTGGACGAAAATGCAATATCTGGGTTTACTGTCCATCCGAGACTGGATGCCACTCTCCTGATATCTATGAGCATAAATATATGGAGTGCTGGCTGAAATATGCAGAAACTCCAAAACTGAATTTCAAGACCAACTATCCCCAATCTTACAGAAACTCACACCCGACCGCCCCGCTGGTCGTCCCTTGGGTCTCTGGTGTTATTAGTGTTTAA MAKVEWGYQGRGKLAFSYKKTTLIICSINIIVALYVLRSLYASLYLYTDNDSRSVVKYTPDQIRKMEQFIRIRRASKPVELIKFVKELKEFSQEETVNELPQPLKQKITEEILLKLRSSNTSSNSTQQREAVESWRKEKLEEARKLITEQTIENSTLSSEEAGILVKALETDWAVLAEEIGVWIPAEIFNREHDDKPEDADEFDGEVLPGRPLPPECNAELHTDYGGAAVRWGLTHHKQSAADCCQACLDHVKRAQPGGRKCNIWVYCPSETGCHSPDIYEHKYMECWLKYAETPKLNFKTNYPQSYRNSHPTAPLVVPWVSGVISV
BLAST of CmaCh12G005250.1 vs. TrEMBL
Match: A0A0A0LLA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360010 PE=4 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 7.1e-161 Identity = 277/326 (84.97%), Postives = 297/326 (91.10%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TrEMBL
Match: E0CP81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10750 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-127 Identity = 226/327 (69.11%), Postives = 272/327 (83.18%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TrEMBL
Match: M5XD09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008511mg PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 1.4e-124 Identity = 218/326 (66.87%), Postives = 263/326 (80.67%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TrEMBL
Match: B9GNX5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12920g PE=4 SV=2) HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123 Identity = 219/315 (69.52%), Postives = 261/315 (82.86%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TrEMBL
Match: A0A067KQG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04297 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123 Identity = 219/315 (69.52%), Postives = 260/315 (82.54%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TAIR10
Match: AT4G33380.1 (AT4G33380.1 unknown protein) HSP 1 Score: 398.3 bits (1022), Expect = 4.6e-111 Identity = 203/326 (62.27%), Postives = 252/326 (77.30%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. TAIR10
Match: AT1G04555.1 (AT1G04555.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06 Identity = 39/149 (26.17%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. NCBI nr
Match: gi|449470184|ref|XP_004152798.1| (PREDICTED: uncharacterized protein LOC101221262 [Cucumis sativus]) HSP 1 Score: 574.7 bits (1480), Expect = 1.0e-160 Identity = 277/326 (84.97%), Postives = 297/326 (91.10%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. NCBI nr
Match: gi|659087786|ref|XP_008444635.1| (PREDICTED: uncharacterized protein LOC103487906 [Cucumis melo]) HSP 1 Score: 573.9 bits (1478), Expect = 1.7e-160 Identity = 276/326 (84.66%), Postives = 300/326 (92.02%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. NCBI nr
Match: gi|1009136393|ref|XP_015885501.1| (PREDICTED: uncharacterized protein LOC107420931 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 472.2 bits (1214), Expect = 7.1e-130 Identity = 224/327 (68.50%), Postives = 278/327 (85.02%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. NCBI nr
Match: gi|225458579|ref|XP_002284610.1| (PREDICTED: uncharacterized protein LOC100248838 [Vitis vinifera]) HSP 1 Score: 464.2 bits (1193), Expect = 1.9e-127 Identity = 226/327 (69.11%), Postives = 272/327 (83.18%), Query Frame = 1
BLAST of CmaCh12G005250.1 vs. NCBI nr
Match: gi|743803943|ref|XP_011017222.1| (PREDICTED: uncharacterized protein LOC105120641 isoform X1 [Populus euphratica]) HSP 1 Score: 458.8 bits (1179), Expect = 8.2e-126 Identity = 222/315 (70.48%), Postives = 265/315 (84.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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