CmaCh12G004880.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G004880.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Peroxisomal membrane protein 11A
Location	Cma_Chr12 : 2538169 .. 2538912 (-)
Sequence length	744

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCCCGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGCGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGGTTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGGGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGTGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAGATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTTGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCACTTTTTCTATCTTGTGCTGGGCTTCTCTCGGCTTTGATTAGCACCCATAAGAACTGGATATCATGCTGA

mRNA sequence

ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCCCGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGCGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGGTTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGGGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGTGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAGATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTTGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCACTTTTTCTATCTTGTGCTGGGCTTCTCTCGGCTTTGATTAGCACCCATAAGAACTGGATATCATGCTGA

Coding sequence (CDS)

ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCCCGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGCGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGGTTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGGGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGTGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAGATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTTGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCACTTTTTCTATCTTGTGCTGGGCTTCTCTCGGCTTTGATTAGCACCCATAAGAACTGGATATCATGCTGA

Protein sequence

MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWISC

Homology

[Close]

BLAST of CmaCh12G004880.1 vs. Swiss-Prot
Match: PX11A_ARATH (Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-86
Identity = 157/248 (63.31%), Postives = 202/248 (81.45%), Query Frame = 1


Query: 1   MASKSPPSSAE-KHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQR 60
           MA+K+P    + K RDF NHLE YL+KRDGVDKLLKISRYATKIIL+SS +PE+  +  R
Sbjct: 1   MATKAPEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPR 60

Query: 61  LKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWL 120
           LKSFES+VGVSRKAFRLGKFVQD+NALR+S ++S+ ELVL I+AYGGEG+YYF+EQFIWL
Sbjct: 61  LKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWL 120

Query: 121 VKAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDG 180
            K+GLID ++S  LQKIS WAE +GY+GS+S+K RD  ++ ++E+C+ ++++I+VS+G  
Sbjct: 121 TKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLA 180

Query: 181 NREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIS 240
              E+EKMK ++ KK +K LSI+QD ADG M +ADIRDG G LS P  +S AGL SA++S
Sbjct: 181 CDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVS 240

Query: 241 THKNWISC 248
           THKNWISC
Sbjct: 241 THKNWISC 248

[Close]

BLAST of CmaCh12G004880.1 vs. Swiss-Prot
Match: PX113_ORYSI (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.6e-60
Identity = 122/241 (50.62%), Postives = 168/241 (69.71%), Query Frame = 1


Query: 7   PSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFESN 66
           P++    RDF  H+EAYL++RDGVDKLLKISRYA ++ L++  LP +   + RLKSFES+
Sbjct: 16  PAAHPPPRDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPAA--SARLKSFESS 75

Query: 67  VGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLID 126
           VG+SRKAFRLGKFVQ++NALR           +A++AYGGEG+YYF+EQF+WL KAGL+ 
Sbjct: 76  VGLSRKAFRLGKFVQNVNALRAHPHPPP---AVALLAYGGEGVYYFLEQFVWLAKAGLLP 135

Query: 127 KRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEK 186
                RLQ++S WAE +GY+GSI++K  +  ++   E+ +K  +       +G REE + 
Sbjct: 136 AHLLPRLQRLSAWAELLGYVGSITIKLEEIGKL---ESSVKMRLK------EGCREESDV 195

Query: 187 MKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWIS 246
           ++ L+ K L+K++S+VQD AD  MAL D+ DG G L     ++ AGLLSALIS HKNW S
Sbjct: 196 VRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNS 242

Query: 247 C 248
           C
Sbjct: 256 C 242

[Close]

BLAST of CmaCh12G004880.1 vs. Swiss-Prot
Match: PX113_ORYSJ (Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.6e-60
Identity = 122/241 (50.62%), Postives = 168/241 (69.71%), Query Frame = 1


Query: 7   PSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFESN 66
           P++    RDF  H+EAYL++RDGVDKLLKISRYA ++ L++  LP +   + RLKSFES+
Sbjct: 16  PAAHPPPRDFLVHVEAYLSRRDGVDKLLKISRYAARLALAAGPLPPAA--SARLKSFESS 75

Query: 67  VGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLID 126
           VG+SRKAFRLGKFVQ++NALR           +A++AYGGEG+YYF+EQF+WL KAGL+ 
Sbjct: 76  VGLSRKAFRLGKFVQNVNALRAHPHPPP---AVALLAYGGEGVYYFLEQFVWLAKAGLLP 135

Query: 127 KRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEK 186
                RLQ++S WAE +GY+GSI++K  +  ++   E+ +K  +       +G REE + 
Sbjct: 136 AHLLPRLQRLSAWAELLGYVGSITIKLEEIGKL---ESSVKMRLK------EGCREESDV 195

Query: 187 MKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWIS 246
           ++ L+ K L+K++S+VQD AD  MAL D+ DG G L     ++ AGLLSALIS HKNW S
Sbjct: 196 VRTLRVKLLLKRMSVVQDVADAVMALGDVTDGKGLLGSSTLMASAGLLSALISAHKNWNS 242

Query: 247 C 248
           C
Sbjct: 256 C 242

[Close]

BLAST of CmaCh12G004880.1 vs. Swiss-Prot
Match: PX112_ORYSJ (Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica GN=PEX11-2 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 115/260 (44.23%), Postives = 163/260 (62.69%), Query Frame = 1


Query: 2   ASKSPPSSAEKH---------RDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPE 61
           A+ SP SS+ +          RD   H+EAYL++RDGVD LLK+S YA ++ L+ +A   
Sbjct: 4   AAGSPSSSSARKPASRPRLPCRDILVHIEAYLSRRDGVDNLLKVSLYAARLALALAAGQP 63

Query: 62  SLP--LTQRLKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQEL--VLAIVAYGGEG 121
            LP   T RL+SFES+VG+SRKAFRLGKFVQ +NALR + +     +  +L ++AYGG+G
Sbjct: 64  PLPHAATARLRSFESSVGLSRKAFRLGKFVQSINALRAAAYHPHPHVHPLLVLLAYGGQG 123

Query: 122 IYYFIEQFIWLVKAGLIDKRY-SSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLK 181
           +Y F+EQF WL KAGL+  R    RL +I  WA+ + ++GSI++K       +E+ A L+
Sbjct: 124 VYNFLEQFAWLAKAGLLPARLLPRRLHRIGVWAQLLAHVGSIAIK-------LEEVAELE 183

Query: 182 ASMDIAVSKGDGNREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLF 241
             ++  + +G G  EE E ++ L  K L+K +S+VQD  D  M + D+    G L     
Sbjct: 184 CGVEARLEEGCG--EESEVVRTLSRKLLLKLMSLVQDMVDSAMTVGDVTGRKGLLGSSTL 243

Query: 242 LSCAGLLSALISTHKNWISC 248
           ++ AGLLSALIS HKNW SC
Sbjct: 244 MASAGLLSALISVHKNWNSC 254

[Close]

BLAST of CmaCh12G004880.1 vs. Swiss-Prot
Match: PX114_ORYSI (Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica GN=PEX11-4 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.3e-26
Identity = 75/233 (32.19%), Postives = 132/233 (56.65%), Query Frame = 1


Query: 15  DFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLP-LTQRLKSFESNVGVSRKA 74
           D  + L  +LAKRDG+DKL+K  +Y +K  L+  A   S P L  R K++E++ G+SRKA
Sbjct: 5   DTLDKLVVFLAKRDGIDKLVKTFQYVSK--LAHWAAESSSPGLAGRAKNWETSAGLSRKA 64

Query: 75  FRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLIDKRYSSRL 134
           FR G+F+  LN LR +  E      LA++A  GE +Y+F + F WL + G++D   + R+
Sbjct: 65  FRTGRFLTGLNGLRRAPGEFG---ALAVLANAGEMVYFFFDHFTWLSRVGVLDAWLARRM 124

Query: 135 QKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEKMKKLQAK 194
             IS + E +GY+  I++      + +  E  L           +G +++++++KK++  
Sbjct: 125 SFISAFGESVGYVFFIAMDLIMIRRGLRQERKLLR---------EGGKDKDKEVKKIRMD 184

Query: 195 KLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWIS 247
           ++M+ ++   + AD  + +ADI + N   +  + L  +GL+SA    ++NW S
Sbjct: 185 RVMRLMATAANVADLVIGIADI-EPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

[Close]

BLAST of CmaCh12G004880.1 vs. TrEMBL
Match: A0A0A0LL07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361460 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.2e-114
Identity = 209/247 (84.62%), Postives = 231/247 (93.52%), Query Frame = 1


Query: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60
           MASK PPSS EK RDFFNHLEAYLAKRDGVDKLLKISRY TKIILSSSA+ ES PLTQRL
Sbjct: 1   MASKPPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRL 60

Query: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 120
           KSFES+VGVSRKAFRLGKF+QDLNALRNSHFES+QE +LA++AYGGEG YYF+EQFIWL 
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLA 120

Query: 121 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 180
           K+GLIDKR+SSRLQKIS WAE IGYIGSISLKFRD N+I+EDEACLKAS++IAV++G G+
Sbjct: 121 KSGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGH 180

Query: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240
           REEEEKMKKL+AK+LMKKLSIVQDFADGFMA+AD+RDGNGR SGPL +S AGLLSALIST
Sbjct: 181 REEEEKMKKLRAKRLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of CmaCh12G004880.1 vs. TrEMBL
Match: V4V7W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002211mg PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 6.9e-100
Identity = 184/247 (74.49%), Postives = 218/247 (88.26%), Query Frame = 1


Query: 3   SKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKS 62
           SKS   S  K RDF NHLEAYLAKRDGVDKLLK+SRYATKIIL+SS LPE+LPLT RLKS
Sbjct: 13  SKSSADSKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKS 72

Query: 63  FESNVGVSRKAFRLGKFVQDLNALRNSHFES--SQELVLAIVAYGGEGIYYFIEQFIWLV 122
           FES+VG+SRKAFRLGKFVQD+NALRNSH +S   ++L+L+++AYGGEG+YYF+EQFIWL 
Sbjct: 73  FESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLA 132

Query: 123 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 182
           K+GLID ++S  LQKIS WAEFIGYIGSISLKFRD   I+EDEACL ++++IA+S+GDG 
Sbjct: 133 KSGLIDPKHSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGC 192

Query: 183 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 242
           +EEE++MKKL+AKKLMKKLSIVQD ADG MALADIRDG G L GPL+++ AGLLSA+IST
Sbjct: 193 KEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGMLFGPLWVASAGLLSAVIST 252

Query: 243 HKNWISC 248
           HKNW+SC
Sbjct: 253 HKNWLSC 259

[Close]

BLAST of CmaCh12G004880.1 vs. TrEMBL
Match: W9SHI0_9ROSA (Peroxisomal membrane protein 11A OS=Morus notabilis GN=L484_021204 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 9.0e-100
Identity = 184/245 (75.10%), Postives = 218/245 (88.98%), Query Frame = 1


Query: 4   KSP-PSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKS 63
           K+P P + +  RDF NHLEAYLAKRDGVDKLLKISRYATKIIL+SSAL E+L LT+RLKS
Sbjct: 20  KTPIPPNPKVDRDFLNHLEAYLAKRDGVDKLLKISRYATKIILASSALSETLTLTRRLKS 79

Query: 64  FESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKA 123
           FE+NVGVSRKAFRLGKFVQD+NALRNSHF+S +ELVL+++AYGGEG+YYF+EQFIWL K+
Sbjct: 80  FETNVGVSRKAFRLGKFVQDVNALRNSHFDSKEELVLSVIAYGGEGLYYFVEQFIWLAKS 139

Query: 124 GLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNRE 183
           GLID ++S  LQKIS WAEFIGY+GS+SLKFRD N+I EDEACL++S+ IA+++G G +E
Sbjct: 140 GLIDPKHSRNLQKISAWAEFIGYLGSMSLKFRDLNRICEDEACLESSIGIAITRGIGFKE 199

Query: 184 EEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHK 243
           E E+++KL+ KKLMK+LSIVQD ADG MALADIRDG G L GPL +SCAGLLSALISTHK
Sbjct: 200 ENERLRKLREKKLMKRLSIVQDLADGLMALADIRDGKGLLLGPLSVSCAGLLSALISTHK 259

Query: 244 NWISC 248
           NWISC
Sbjct: 260 NWISC 264

[Close]

BLAST of CmaCh12G004880.1 vs. TrEMBL
Match: A0A061FCU5_THECC (Peroxin 11A isoform 1 OS=Theobroma cacao GN=TCM_033996 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.0e-99
Identity = 180/243 (74.07%), Postives = 213/243 (87.65%), Query Frame = 1


Query: 5   SPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFE 64
           +P  S  K +DF NHLEAYL+KRDGVDKLLKISRYATKIIL+SS LPE++PLT+RLKSFE
Sbjct: 9   APTQSKPKEKDFLNHLEAYLSKRDGVDKLLKISRYATKIILASSVLPETVPLTRRLKSFE 68

Query: 65  SNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGL 124
           S+VG+SRKAFRLGKFVQD+NALRNSH +S QE+ L+I+AYGGEG+YYF+EQFIWL K+GL
Sbjct: 69  SSVGLSRKAFRLGKFVQDVNALRNSHLDSKQEIFLSIIAYGGEGLYYFVEQFIWLAKSGL 128

Query: 125 IDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEE 184
           ID ++S  LQK+S WAEFIGYIGSISLKFRD  +I EDEACL +S++IAVS+G G +EEE
Sbjct: 129 IDAKHSRNLQKLSAWAEFIGYIGSISLKFRDLKRINEDEACLNSSIEIAVSRGAGCKEEE 188

Query: 185 EKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNW 244
           E+  KL+ K+LMKKLS+VQD ADG MALADI+DG GR S PL +SCAGLLSALISTHKNW
Sbjct: 189 ERRNKLREKELMKKLSVVQDLADGLMALADIQDGKGRFSDPLVVSCAGLLSALISTHKNW 248

Query: 245 ISC 248
           +SC
Sbjct: 249 VSC 251

[Close]

BLAST of CmaCh12G004880.1 vs. TrEMBL
Match: A0A0D2S518_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G204400 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-97
Identity = 176/239 (73.64%), Postives = 209/239 (87.45%), Query Frame = 1


Query: 9   SAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFESNVG 68
           S  K +DF NHLE YLAKRDGVDKLLKISRYATKIIL+SS LPE++PLT++LKSFES+VG
Sbjct: 18  SEPKGKDFLNHLEVYLAKRDGVDKLLKISRYATKIILASSVLPETVPLTRQLKSFESSVG 77

Query: 69  VSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLIDKR 128
           +SRKAFRLGKFVQD+NALRNSH +S +E++L+++AYGGEG+YYF+EQFIWL K+GLID +
Sbjct: 78  LSRKAFRLGKFVQDVNALRNSHLDSKEEILLSVIAYGGEGLYYFVEQFIWLAKSGLIDAK 137

Query: 129 YSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEKMK 188
           +S  LQKIS WAE IGYIGSISLK RD  +I EDEACL +S++IA+S+G G  EEEE+ K
Sbjct: 138 HSRNLQKISAWAELIGYIGSISLKLRDLKKIKEDEACLNSSIEIAISRGVGRTEEEERRK 197

Query: 189 KLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWISC 248
           KL+ KKLMK+LS+VQD ADG MALADIRDG GR + PL LSCAGLLSALISTHKNW+SC
Sbjct: 198 KLREKKLMKQLSVVQDIADGLMALADIRDGKGRFTDPLLLSCAGLLSALISTHKNWVSC 256

[Close]

BLAST of CmaCh12G004880.1 vs. TAIR10
Match: AT1G47750.1 (AT1G47750.1 peroxin 11A)

HSP 1 Score: 320.9 bits (821), Expect = 7.1e-88
Identity = 157/248 (63.31%), Postives = 202/248 (81.45%), Query Frame = 1


Query: 1   MASKSPPSSAE-KHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQR 60
           MA+K+P    + K RDF NHLE YL+KRDGVDKLLKISRYATKIIL+SS +PE+  +  R
Sbjct: 1   MATKAPEKITKPKDRDFLNHLETYLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPR 60

Query: 61  LKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWL 120
           LKSFES+VGVSRKAFRLGKFVQD+NALR+S ++S+ ELVL I+AYGGEG+YYF+EQFIWL
Sbjct: 61  LKSFESSVGVSRKAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWL 120

Query: 121 VKAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDG 180
            K+GLID ++S  LQKIS WAE +GY+GS+S+K RD  ++ ++E+C+ ++++I+VS+G  
Sbjct: 121 TKSGLIDAKHSKWLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLA 180

Query: 181 NREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIS 240
              E+EKMK ++ KK +K LSI+QD ADG M +ADIRDG G LS P  +S AGL SA++S
Sbjct: 181 CDGEDEKMKMIKEKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVS 240

Query: 241 THKNWISC 248
           THKNWISC
Sbjct: 241 THKNWISC 248

[Close]

BLAST of CmaCh12G004880.1 vs. TAIR10
Match: AT3G47430.1 (AT3G47430.1 peroxin 11B)

HSP 1 Score: 104.8 bits (260), Expect = 8.0e-23
Identity = 75/239 (31.38%), Postives = 121/239 (50.63%), Query Frame = 1


Query: 15  DFFNHLEAYLAKRDGVDKLLKISRYATKIIL--SSSALPESLPLTQRLKSFESNVGVSRK 74
           D  + L  +LAKRDG+DKL+K  +Y  K+      +  PE+     R K +E   G+SRK
Sbjct: 4   DTVDKLVVFLAKRDGIDKLVKTFQYVAKLACWHVEATRPEA---ADRFKKWEVASGLSRK 63

Query: 75  AFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLIDKRYSSR 134
           AFR G+ +   NALR +   +     LA++A  GE +Y+F + F+WL + G ID + + +
Sbjct: 64  AFRTGRSLTGFNALRRNPGATPMIRFLAVLANSGEMVYFFFDHFLWLSRIGSIDAKLAKK 123

Query: 135 LQKISGWAEFIGY-----IGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEKM 194
           +  IS + E  GY     I  I +K R           LK+   +  S  +   E   K+
Sbjct: 124 MSFISAFGESFGYTFFIIIDCIFIKQR-----------LKSLKKLQHSTDEPKEEIGAKI 183

Query: 195 KKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWIS 247
            +++   +M+ + I  + AD  +ALA+I   N   +  + L  +GL+SA    ++NW S
Sbjct: 184 SEIRGDIVMRLMGISANVADLLIALAEIHP-NPFCNHTITLGISGLVSAWAGWYRNWPS 227

[Close]

BLAST of CmaCh12G004880.1 vs. NCBI nr
Match: gi|449470003|ref|XP_004152708.1| (PREDICTED: peroxisomal membrane protein 11A [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 3.2e-114
Identity = 209/247 (84.62%), Postives = 231/247 (93.52%), Query Frame = 1


Query: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60
           MASK PPSS EK RDFFNHLEAYLAKRDGVDKLLKISRY TKIILSSSA+ ES PLTQRL
Sbjct: 1   MASKPPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRL 60

Query: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 120
           KSFES+VGVSRKAFRLGKF+QDLNALRNSHFES+QE +LA++AYGGEG YYF+EQFIWL 
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLA 120

Query: 121 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 180
           K+GLIDKR+SSRLQKIS WAE IGYIGSISLKFRD N+I+EDEACLKAS++IAV++G G+
Sbjct: 121 KSGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGH 180

Query: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240
           REEEEKMKKL+AK+LMKKLSIVQDFADGFMA+AD+RDGNGR SGPL +S AGLLSALIST
Sbjct: 181 REEEEKMKKLRAKRLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of CmaCh12G004880.1 vs. NCBI nr
Match: gi|659087888|ref|XP_008444688.1| (PREDICTED: peroxisomal membrane protein 11A [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-113
Identity = 207/247 (83.81%), Postives = 231/247 (93.52%), Query Frame = 1


Query: 1   MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRL 60
           MASK+PPSS EK RDFFNHLEAYLAKRDGVDKLLKISRY TKIILSSSA+ ES PLT RL
Sbjct: 1   MASKAPPSSTEKQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTHRL 60

Query: 61  KSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLV 120
           KSFES+VGVSRKAFRLGKF+QD+NALRNSHFES+QE +LA++AYGGEGIYYF+EQFIWL 
Sbjct: 61  KSFESSVGVSRKAFRLGKFIQDINALRNSHFESNQEFLLALLAYGGEGIYYFVEQFIWLA 120

Query: 121 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 180
           K+GLIDKR+SSRLQKIS WAE IGYIGSISLKFRD N+I+EDEACLKAS++IAV++G G+
Sbjct: 121 KSGLIDKRHSSRLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGH 180

Query: 181 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 240
           REE+EKMKKL+AK LMKKLSIVQDFADGFMA+AD+RDGNGR SGPL +S AGLLSALIST
Sbjct: 181 REEDEKMKKLRAKMLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALIST 240

Query: 241 HKNWISC 248
           HKNWISC
Sbjct: 241 HKNWISC 247

[Close]

BLAST of CmaCh12G004880.1 vs. NCBI nr
Match: gi|567884761|ref|XP_006434939.1| (hypothetical protein CICLE_v10002211mg [Citrus clementina])

HSP 1 Score: 371.7 bits (953), Expect = 9.9e-100
Identity = 184/247 (74.49%), Postives = 218/247 (88.26%), Query Frame = 1


Query: 3   SKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKS 62
           SKS   S  K RDF NHLEAYLAKRDGVDKLLK+SRYATKIIL+SS LPE+LPLT RLKS
Sbjct: 13  SKSSADSKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKS 72

Query: 63  FESNVGVSRKAFRLGKFVQDLNALRNSHFES--SQELVLAIVAYGGEGIYYFIEQFIWLV 122
           FES+VG+SRKAFRLGKFVQD+NALRNSH +S   ++L+L+++AYGGEG+YYF+EQFIWL 
Sbjct: 73  FESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLA 132

Query: 123 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 182
           K+GLID ++S  LQKIS WAEFIGYIGSISLKFRD   I+EDEACL ++++IA+S+GDG 
Sbjct: 133 KSGLIDPKHSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGC 192

Query: 183 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 242
           +EEE++MKKL+AKKLMKKLSIVQD ADG MALADIRDG G L GPL+++ AGLLSA+IST
Sbjct: 193 KEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGMLFGPLWVASAGLLSAVIST 252

Query: 243 HKNWISC 248
           HKNW+SC
Sbjct: 253 HKNWLSC 259

[Close]

BLAST of CmaCh12G004880.1 vs. NCBI nr
Match: gi|703135955|ref|XP_010106027.1| (Peroxisomal membrane protein 11A [Morus notabilis])

HSP 1 Score: 371.3 bits (952), Expect = 1.3e-99
Identity = 184/245 (75.10%), Postives = 218/245 (88.98%), Query Frame = 1


Query: 4   KSP-PSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKS 63
           K+P P + +  RDF NHLEAYLAKRDGVDKLLKISRYATKIIL+SSAL E+L LT+RLKS
Sbjct: 20  KTPIPPNPKVDRDFLNHLEAYLAKRDGVDKLLKISRYATKIILASSALSETLTLTRRLKS 79

Query: 64  FESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKA 123
           FE+NVGVSRKAFRLGKFVQD+NALRNSHF+S +ELVL+++AYGGEG+YYF+EQFIWL K+
Sbjct: 80  FETNVGVSRKAFRLGKFVQDVNALRNSHFDSKEELVLSVIAYGGEGLYYFVEQFIWLAKS 139

Query: 124 GLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNRE 183
           GLID ++S  LQKIS WAEFIGY+GS+SLKFRD N+I EDEACL++S+ IA+++G G +E
Sbjct: 140 GLIDPKHSRNLQKISAWAEFIGYLGSMSLKFRDLNRICEDEACLESSIGIAITRGIGFKE 199

Query: 184 EEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHK 243
           E E+++KL+ KKLMK+LSIVQD ADG MALADIRDG G L GPL +SCAGLLSALISTHK
Sbjct: 200 ENERLRKLREKKLMKRLSIVQDLADGLMALADIRDGKGLLLGPLSVSCAGLLSALISTHK 259

Query: 244 NWISC 248
           NWISC
Sbjct: 260 NWISC 264

[Close]

BLAST of CmaCh12G004880.1 vs. NCBI nr
Match: gi|568838957|ref|XP_006473464.1| (PREDICTED: peroxisomal membrane protein 11A [Citrus sinensis])

HSP 1 Score: 370.9 bits (951), Expect = 1.7e-99
Identity = 184/247 (74.49%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 3   SKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKS 62
           SKS   S  K RDF NHLEAYLAKRDGVDKLLK+SRYATKIIL+SS LPE+LPLT RLKS
Sbjct: 13  SKSSTDSKPKDRDFLNHLEAYLAKRDGVDKLLKLSRYATKIILASSVLPETLPLTGRLKS 72

Query: 63  FESNVGVSRKAFRLGKFVQDLNALRNSHFES--SQELVLAIVAYGGEGIYYFIEQFIWLV 122
           FES+VG+SRKAFRLGKFVQD+NALRNSH +S   ++L+L+++AYGGEG+YYF+EQFIWL 
Sbjct: 73  FESSVGLSRKAFRLGKFVQDVNALRNSHLDSLSREDLILSVIAYGGEGLYYFVEQFIWLA 132

Query: 123 KAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGN 182
           K+GLID + S  LQKIS WAEFIGYIGSISLKFRD   I+EDEACL ++++IA+S+GDG 
Sbjct: 133 KSGLIDPKQSRSLQKISAWAEFIGYIGSISLKFRDLKMILEDEACLASTIEIAISRGDGY 192

Query: 183 REEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALIST 242
           +EEE++MKKL+AKKLMKKLSIVQD ADG MALADIRDG G L GPL+++ AGLLSA+IST
Sbjct: 193 KEEEQRMKKLKAKKLMKKLSIVQDLADGLMALADIRDGKGMLFGPLWVASAGLLSAVIST 252

Query: 243 HKNWISC 248
           HKNW+SC
Sbjct: 253 HKNWLSC 259

The following BLAST results are available for this feature:

BLAST of CmaCh12G004880.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PX11A_ARATH	1.3e-86	63.31	Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1	[more]
PX113_ORYSI	2.6e-60	50.62	Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 ...	[more]
PX113_ORYSJ	2.6e-60	50.62	Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=...	[more]
PX112_ORYSJ	1.2e-49	44.23	Peroxisomal membrane protein 11-2 OS=Oryza sativa subsp. japonica GN=PEX11-2 PE=...	[more]
PX114_ORYSI	7.3e-26	32.19	Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica GN=PEX11-4 PE=2 ...	[more]

BLAST of CmaCh12G004880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL07_CUCSA	2.2e-114	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361460 PE=4 SV=1	[more]
V4V7W2_9ROSI	6.9e-100	74.49	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002211mg PE=4 SV=1	[more]
W9SHI0_9ROSA	9.0e-100	75.10	Peroxisomal membrane protein 11A OS=Morus notabilis GN=L484_021204 PE=4 SV=1	[more]
A0A061FCU5_THECC	2.0e-99	74.07	Peroxin 11A isoform 1 OS=Theobroma cacao GN=TCM_033996 PE=4 SV=1	[more]
A0A0D2S518_GOSRA	1.9e-97	73.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G204400 PE=4 SV=1	[more]

BLAST of CmaCh12G004880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47750.1	7.1e-88	63.31	peroxin 11A	[more]
AT3G47430.1	8.0e-23	31.38	peroxin 11B	[more]

BLAST of CmaCh12G004880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470003\|ref\|XP_004152708.1\|	3.2e-114	84.62	PREDICTED: peroxisomal membrane protein 11A [Cucumis sativus]	[more]
gi\|659087888\|ref\|XP_008444688.1\|	2.1e-113	83.81	PREDICTED: peroxisomal membrane protein 11A [Cucumis melo]	[more]
gi\|567884761\|ref\|XP_006434939.1\|	9.9e-100	74.49	hypothetical protein CICLE_v10002211mg [Citrus clementina]	[more]
gi\|703135955\|ref\|XP_010106027.1\|	1.3e-99	75.10	Peroxisomal membrane protein 11A [Morus notabilis]	[more]
gi\|568838957\|ref\|XP_006473464.1\|	1.7e-99	74.49	PREDICTED: peroxisomal membrane protein 11A [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008733	PEX11

Vocabulary: **Cellular Component**
Term	Definition
GO:0005779	integral component of peroxisomal membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016559	peroxisome fission

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0044375	regulation of peroxisome size
cellular_component	GO:0005779	integral component of peroxisomal membrane
molecular_function	GO:0042802	identical protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G004880	CmaCh12G004880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G004880.1	CmaCh12G004880.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G004880.1.CDS.1	CmaCh12G004880.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G004880.1.exon.1	CmaCh12G004880.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008733	Peroxisomal biogenesis factor 11	PFAM	PF05648	PEX11	coord: 18..244 score: 6.6
None	No IPR available	PANTHER	PTHR12652	PEROXISOMAL BIOGENESIS FACTOR 11	coord: 9..247 score: 7.2
None	No IPR available	PANTHER	PTHR12652:SF10	PEROXISOMAL MEMBRANE PROTEIN PMP27	coord: 9..247 score: 7.2