CmaCh12G003970.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACATCGACGGCTGAAATCATACTAATTTCTCTTCCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTCCATTGGATCTGATATTCGGTGTTTCTCGCAAGGAAAGAACCCATTTGGCTTGTATTGTCCTTCTTTTGTTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCGTTCGCACCCAAGGATGTGGTTCTCTATCAATACGAGGCTTGCCCATTCTGCAACAAAGTTAAAGGTAATTAGCATAATCTCTTAGAGGAATTCTCAGAATATGAAGTTTTTGTTAACTTGATCTTGACAAGGAAAATAGAGAAGGTGGATTAAGGACTGGACAATAGGCCATATATTACTGTTACCTATGAGCTGAAGCTAGAATTCTTGTCGTGAAGTTGCAATTCTATGCCATTTTTCCCTTCTAGGTCCTTAAAATTTCTGTTGATTTTCCTTTTCTCCAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATTAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATACATACATACATACATACATACATACATACATACATATATATATATATATATATATATATATATATATATATATATATATATATATGTCTTCAATTAGAGTAGATGTTGATGATCGGGGCCTGTCTTGCTTGTTCTTGTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGGTATACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTACATCTCGAGGCTCTATACTTGCGTACAAGCAGCTATTATATGGAACCAATTGAGACTTTAAGGGAAACCAGCGTCTTCATTGCCAAAGAATTTGACTGACTAATTTGTCTTTCGACATTTTTGTGTATCATATGTAACTGATTGATGAGCATATATTATGTAGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCAAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGTATGATAGTAAGTCAATTTATGAGCCGTTCTTTTTTTTTCCCCCTTAGTTTTTTGAATTATATATGAGCTGGAGACGGTTTCTAGGGCCCTGTTTGATAACAATTTGATTTTTGGTTTTGAAACGTTAAGCTGTTAAACGTATCATCACTTGTGGGTTTATTTCCTTTTTACTTTTTTCAAATGTTTTCAAAGTCCAAGCCAAGTTTTGAATATTCACTTTATAATTTGGATTACCTTTTTACAATTATTATATTCATAAGAAAACATCCTCAACATGTTTTTTTGTTTGTTTTTTGTTGTTTTTGTTGTTCTTGTTGTTGAAGCAATCACATATATTCATGAGCTCCTGACTTGTCTGTATAACTTTAATATGGTGCAGGAAATTTTAGTTTCACTCAAAGGATAATAGCTAAGTATGGTGGGGCTACAGCCATGTATTTTGTTTCCAAGAAATTGAAAGAAAAACATAACATCGTTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTATGCTTAAACTTCATTCACGATTCTGTTCGGTTTTTTAGGTTTAAGCTAAAGGTATTTGAGAAAAATAGTTCAATTTTACGACGAATTTGTCTCTCGATAGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTTGGCGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTGCAAGGATCGTCTCTTGAAGTTAGTACAATTTAAAGTTTTTGTTTTTGATTACTCAATAGCCTGCCAGTTTATTGATAAATATCTGAACTTCTTTTAACATCAGATCCTAAAAGATTGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATCGCGAATTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAGCCTAAATGCCATCAAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTTTATTTTTATGAGAAACATGGATTCCTGCA CTTACATCGACGGCTGAAATCATACTAATTTCTCTTCCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTCCATTGGATCTGATATTCGGTGTTTCTCGCAAGGAAAGAACCCATTTGGCTTGTATTGTCCTTCTTTTGTTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCGTTCGCACCCAAGGATGTGGTTCTCTATCAATACGAGGCTTGCCCATTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATTAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCAAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGAAATTTTAGTTTCACTCAAAGGATAATAGCTAAGTATGGTGGGGCTACAGCCATGTATTTTGTTTCCAAGAAATTGAAAGAAAAACATAACATCGTTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTTGGCGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTGCAAGGATCGTCTCTTGAAGTTAGTACAATTTAAAGTTTTTGTTTTTGATTACTCAATAGCCTGCCAGTTTATTGATAAATATCTGAACTTCTTTTAACATCAGATCCTAAAAGATTGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATCGCGAATTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAGCCTAAATGCCATCAAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTTTATTTTTATGAGAAACATGGATTCCTGCA ATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTCCATTGGATCTGATATTCGGTGTTTCTCGCAAGGAAAGAACCCATTTGGCTTGTATTGTCCTTCTTTTGTTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCGTTCGCACCCAAGGATGTGGTTCTCTATCAATACGAGGCTTGCCCATTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATTAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCAAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGAAATTTTAGTTTCACTCAAAGGATAATAGCTAAGTATGGTGGGGCTACAGCCATGTATTTTGTTTCCAAGAAATTGAAAGAAAAACATAACATCGTTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTTGGCGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTGCAAGGATCGTCTCTTGA MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTSIGSDIRCFSQGKNPFGLYCPSFVRNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTDIIDKLYKRIHPENSTSDSEEERKWLGWVDNHLVHVLSPNIYRNYKEALESFNYITTHGNFSFTQRIIAKYGGATAMYFVSKKLKEKHNIVDERKALYGAAETWVEALKDRQFLGGPNPNLADLAVFGVLRPIRHLQSGIDMVENTRVGEWYSRMEDAVGESARIVS
BLAST of CmaCh12G003970.1 vs. Swiss-Prot
Match: PGES2_BOVIN (Prostaglandin E synthase 2 OS=Bos taurus GN=PTGES2 PE=1 SV=3) HSP 1 Score: 206.1 bits (523), Expect = 5.9e-52 Identity = 111/272 (40.81%), Postives = 159/272 (58.46%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.8e-51 Identity = 114/266 (42.86%), Postives = 157/266 (59.02%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=3) HSP 1 Score: 202.6 bits (514), Expect = 6.6e-51 Identity = 109/275 (39.64%), Postives = 160/275 (58.18%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 8.6e-51 Identity = 112/273 (41.03%), Postives = 155/273 (56.78%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.0e-35 Identity = 72/145 (49.66%), Postives = 99/145 (68.28%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TrEMBL
Match: A0A0A0LQG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345970 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 1.5e-150 Identity = 270/322 (83.85%), Postives = 284/322 (88.20%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TrEMBL
Match: B9H508_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26400g PE=4 SV=2) HSP 1 Score: 431.4 bits (1108), Expect = 9.7e-118 Identity = 218/325 (67.08%), Postives = 259/325 (79.69%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TrEMBL
Match: E6NTZ4_JATCU (JHL20J20.11 protein OS=Jatropha curcas GN=JHL20J20.11 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 7.9e-112 Identity = 210/324 (64.81%), Postives = 247/324 (76.23%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TrEMBL
Match: A0A0D2S4A9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G193000 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-111 Identity = 216/326 (66.26%), Postives = 250/326 (76.69%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TrEMBL
Match: F6GZS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14730 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 6.7e-111 Identity = 216/330 (65.45%), Postives = 252/330 (76.36%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. TAIR10
Match: AT5G42150.1 (AT5G42150.1 Glutathione S-transferase family protein) HSP 1 Score: 385.6 bits (989), Expect = 3.1e-107 Identity = 202/326 (61.96%), Postives = 238/326 (73.01%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. NCBI nr
Match: gi|659089109|ref|XP_008445331.1| (PREDICTED: prostaglandin E synthase 2-like [Cucumis melo]) HSP 1 Score: 543.1 bits (1398), Expect = 3.3e-151 Identity = 272/322 (84.47%), Postives = 285/322 (88.51%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. NCBI nr
Match: gi|449450496|ref|XP_004142998.1| (PREDICTED: prostaglandin E synthase 2-like [Cucumis sativus]) HSP 1 Score: 540.4 bits (1391), Expect = 2.1e-150 Identity = 270/322 (83.85%), Postives = 284/322 (88.20%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. NCBI nr
Match: gi|566173350|ref|XP_002306945.2| (hypothetical protein POPTR_0005s26400g [Populus trichocarpa]) HSP 1 Score: 431.4 bits (1108), Expect = 1.4e-117 Identity = 218/325 (67.08%), Postives = 259/325 (79.69%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. NCBI nr
Match: gi|743918118|ref|XP_011003060.1| (PREDICTED: prostaglandin E synthase 2 [Populus euphratica]) HSP 1 Score: 430.3 bits (1105), Expect = 3.1e-117 Identity = 217/325 (66.77%), Postives = 258/325 (79.38%), Query Frame = 1
BLAST of CmaCh12G003970.1 vs. NCBI nr
Match: gi|645228949|ref|XP_008221232.1| (PREDICTED: prostaglandin E synthase 2-like [Prunus mume]) HSP 1 Score: 414.8 bits (1065), Expect = 1.3e-112 Identity = 215/324 (66.36%), Postives = 254/324 (78.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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