CmaCh12G000320.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G000320.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Poor homologous synapsis 1
Location	Cma_Chr12 : 123457 .. 126606 (-)
Sequence length	1098

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGATTTGAAGGCGGGGAACAGAGCAAAGAGGAAGCGGAGATGCCATTTGCTGCCATTAGAGACCAATGGGAAGTTCAATTTTCTCGCTTCGTTTGCTATCCAACCACCACATCTACATCCAACGACACCGACACCGACACCAACCTCCGTCCTCTCCTTCTTAATGCCCGAAGCCGCCGCCCTCCTCGAGGCACATGGATCTCTTCCTCTTCCACGGCTGTCCTGCAGCTCCTTCACCATTGCTCCGCATCTGATTTTATTCTTGCCGTACGCTTTCGAGATAAAATCCTCGTGAGTTCTTTTTTCACTCTTCTCCCCAAGTTCAACTCGTAATCTGTATGTGCCGGTAAATTTGTCGGAGACTAAATGCTTGCTTCGCTGAATATTATACACTCGCTTCTTCAGATTCCTCCAATTGTGTCCTTACCGCATTTAAGAATTTCCTATTACATTTCTTTAGCCATTGCTTAAATTCATGCAGTTTCTTATTAATGTTCCTGAAATCAACCTGATCATGTGCTAATTTCCGCTTAAGGAGTTGGTCTCTTGTTTGATTTCTTCCGTTTCCCCCCCTTAACCTCCCTGCATGGATGATTACCTTCGAGGCTGCATCTTGACCTCATTATATACGCTTTATCCTGTAGTTCATTTATTATACAACACCAAATACTATGGAAGGTGAGAAATCCTACGTTGTGTATTATGCTTCCTCTGGCAAATCAAATGCAGCACCTTATACTGAGTTCAGTCGTTTAGCACAATCCAAAGTATCAACCTAAGACACGATTTCTATTATTTGGATGCGTTTATCGCAATGGATGAATCATGTATTATTTGCATACTGATGTAGGAAGAGCACTACCTCTCGAAGCTGCATTTCTCTTGGCCTCAGATGTGCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATGTTCGGAAGTTATAGAGATTCAGCTGACGAGGCAAGTCATGATATGTTCATCAGATTTTGTTCGTCTGTGGTGCCACGGAATTTCAAATAAAGTAGTTTTCTGAGGATGCGTTTTAGTCGTCAAACCCCACAACTCACAAGGGCACTGTTTTTCTTGGCAGATCCAAAAATTTGCCCTAAGATTTTCAACATCTTGCGAAATTGATTCATTTGTGAGCATTCTCAAGGTATTTATCATGGATTCCTTTGATGGCACGGTTTAATGGAAGATATTTGTATACTAAAAGCTAGCTGCTGCTATTGTTCTTTTCTCCTGTTTCAGGAGATGTCGAAGGATGCAAGAGATATACAACCAATAAGTTGCGACTTTGGATCTCAGATTTCGTCTGAGTTATTATGTTCAAATACAAATAGGCCGTCTGACAGGTAAATGGAAATTATCTAATAATCAAATGCATCATTTTCTTTTTACAGCCACAGACTCAGAGAGAGAGAGAGAGAGAGAGAGATTTGATGTATCTTATGTTTCCAGCCTCTCTGAAGAATTGAGCAATTCTACCGTGCTCCAGCCTTACACCCCTGAAATGCCTTTGAGCTTAAAAGATACAGCAGAGAAATACTCATCTTCTCAGGAAAATGTACATGTTGACCACTTAGAAAGCATATTTGCAGCGTTGCCACCCAGTTTCACGTCTATGGTATCGAACTGTTCAGATGTCAAACAAGGTAGATGCTATGACAAACTTATAGCCAAAAAATATTTCAAATCATTGTATTGATCAGTTCCCTTTGTTGTAAGGTTCAACTGCGACGCCACCGTCTGCCACAAAGGATAATGATCTAAAGTCTCAAATCATGGTATGTTTCATTGTTATCAAATGGAATTTCTTTTTGCGATACCCTCTATTAAATGGTTTGATCTAATATTGAAATTTTTTCTTGAACTCAATATTGTACATTTCGTATCATCATCGTTGGGTTTTTATCTTTTTTTTTTTTTTTTTTTTTGGGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCATCATCGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGACAGAAATGTATGGAAGATTCTTCCTTTCAAGGTACGTTTATATCAACACTTGGCTAAACTTGCAAATAGTTTCCATGATGCCCTGCATTTTAGGAACTGTTTTAGTCGATTCAAGATGGTAGAGTTAGTTCTGTGAAATCTTGACCCAGACTGAAAGACCAACAGAAAATCTTAACAAAATTATTGATACCTAACATAAAATGCCAGAAATTAGGAATGAAACACATTCTGGAGGTCTAATTTCAGAATACGCATTTTGTTTGTTTTATCTGATTTATTTTCCTTTTTGGGCTGGGCTTAGTTTTCTGTTAAGGCTCGTTATCAAAATCAGCTGTGTTGGGCCTATTTTAAGGCTTTTCTCCTGTATATTTTTCAGTCAGCTCAATAATACACGACATTTGTTCCAAAAATAATAAAATTAAAAGATTAATAATAATAAAAAACACACGAACAACGTCTCAACAATCAGATGACGTTAAAACAGCCAGTAATGTAATTTTGAAATGCATGTCAGCTTCATTAGATTAGATGCCAAGGTTGTAAAATGCTGTGAATTTCTCTACATGACCATAGCAATATCTCTAGAAATGCGCTTTCTTTATTAACGGGATGCAATTTCAAATAATACATTTCCAATTCGAGAAGTAAATTGTTTTTTCTTATATAATACACTGTAATATTAAATACTGATCTGTTGGTTTAAATTCTTGGTGGTTGCTAGATATGTTGAACAGAGTTGAGAAAATTGTCGGCGAAATTGGAGGTGATTTGGCGCTGTAATTCTCAGGGTAATGTCCAGAATACTTTCTTAAGATGTCTTTCCATTAGCCCCCAGCGGTGGCCATATTATTTTCGCATACACATTATTCTAGTTTGCACTTATATACGGAATATTCAAGTTAATTTGACATCTCA

mRNA sequence

ATGGCGGGATTTGAAGGCGGGGAACAGAGCAAAGAGGAAGCGGAGATGCCATTTGCTGCCATTAGAGACCAATGGGAAGTTCAATTTTCTCGCTTCGTTTGCTATCCAACCACCACATCTACATCCAACGACACCGACACCGACACCAACCTCCGTCCTCTCCTTCTTAATGCCCGAAGCCGCCGCCCTCCTCGAGGCACATGGATCTCTTCCTCTTCCACGGCTGTCCTGCAGCTCCTTCACCATTGCTCCGCATCTGATTTTATTCTTGCCGTACGCTTTCGAGATAAAATCCTCGAAGAGCACTACCTCTCGAAGCTGCATTTCTCTTGGCCTCAGATGTGCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATGTTCGGAAGTTATAGAGATTCAGCTGACGAGGCAAGTCATGATATGTTCATCAGATTTTGTTCGTCTGTGATCCAAAAATTTGCCCTAAGATTTTCAACATCTTGCGAAATTGATTCATTTGTGAGCATTCTCAAGGAGATGTCGAAGGATGCAAGAGATATACAACCAATAAGTTGCGACTTTGGATCTCAGATTTCGTCTGAGTTATTATGTTCAAATACAAATAGGCCGTCTGACAGCCTCTCTGAAGAATTGAGCAATTCTACCGTGCTCCAGCCTTACACCCCTGAAATGCCTTTGAGCTTAAAAGATACAGCAGAGAAATACTCATCTTCTCAGGAAAATGTACATGTTGACCACTTAGAAAGCATATTTGCAGCGTTGCCACCCAGTTTCACGTCTATGGTATCGAACTGTTCAGATGTCAAACAAGGTTCAACTGCGACGCCACCGTCTGCCACAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGAGTTGAGAAAATTGTCGGCGAAATTGGAGGTGATTTGGCGCTGTAATTCTCAGGGTAATGTCCAGAATACTTTCTTAAGATGTCTTTCCATTAGCCCCCAGCGGTGGCCATATTATTTTCGCATACACATTATTCTAGTTTGCACTTATATACGGAATATTCAAGTTAATTTGACATCTCA

Coding sequence (CDS)

ATGGCGGGATTTGAAGGCGGGGAACAGAGCAAAGAGGAAGCGGAGATGCCATTTGCTGCCATTAGAGACCAATGGGAAGTTCAATTTTCTCGCTTCGTTTGCTATCCAACCACCACATCTACATCCAACGACACCGACACCGACACCAACCTCCGTCCTCTCCTTCTTAATGCCCGAAGCCGCCGCCCTCCTCGAGGCACATGGATCTCTTCCTCTTCCACGGCTGTCCTGCAGCTCCTTCACCATTGCTCCGCATCTGATTTTATTCTTGCCGTACGCTTTCGAGATAAAATCCTCGAAGAGCACTACCTCTCGAAGCTGCATTTCTCTTGGCCTCAGATGTGCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATGTTCGGAAGTTATAGAGATTCAGCTGACGAGGCAAGTCATGATATGTTCATCAGATTTTGTTCGTCTGTGATCCAAAAATTTGCCCTAAGATTTTCAACATCTTGCGAAATTGATTCATTTGTGAGCATTCTCAAGGAGATGTCGAAGGATGCAAGAGATATACAACCAATAAGTTGCGACTTTGGATCTCAGATTTCGTCTGAGTTATTATGTTCAAATACAAATAGGCCGTCTGACAGCCTCTCTGAAGAATTGAGCAATTCTACCGTGCTCCAGCCTTACACCCCTGAAATGCCTTTGAGCTTAAAAGATACAGCAGAGAAATACTCATCTTCTCAGGAAAATGTACATGTTGACCACTTAGAAAGCATATTTGCAGCGTTGCCACCCAGTTTCACGTCTATGGTATCGAACTGTTCAGATGTCAAACAAGGTTCAACTGCGACGCCACCGTCTGCCACAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGAGTTGAGAAAATTGTCGGCGAAATTGGAGGTGATTTGGCGCTGTAA

Protein sequence

MAGFEGGEQSKEEAEMPFAAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQLLHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELLCSNTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYSSSQENVHVDHLESIFAALPPSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGDLAL

Homology

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BLAST of CmaCh12G000320.1 vs. Swiss-Prot
Match: POHS1_ARATH (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-33
Identity = 119/352 (33.81%), Postives = 165/352 (46.88%), Query Frame = 1


Query: 24  QWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWIS-SSSTAVLQLLHH 83
           +W + F+RFV YP++ S          L+PL         P GTW+S SSST  L ++  
Sbjct: 22  RWTIGFARFVHYPSSPSPH------PVLKPLG-KREQYHSPHGTWLSASSSTVSLHIVDE 81

Query: 84  CSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEASHD 143
            + SD IL+V+   K+LEEHY+SKL+F+WPQM C+SGFP+RG+R +F +Y DSA++    
Sbjct: 82  LNRSDVILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQ---- 141

Query: 144 MFIRFCSSVIQKFALRFSTSCEIDSF-------VSILKEMSKDAR------------DIQ 203
                    IQKFALRFST      F       +  LKE S   +            D  
Sbjct: 142 ---------IQKFALRFSTCDAALEFVEALKEKIKGLKEASTQNQKNKTRCDVSFQSDYN 201

Query: 204 PISCDFGSQISSELLCSNTNRPSDSL----------------SEELSNSTVLQPYTPEMP 263
           P           E    N  RP +S                 SE  S  +    Y P + 
Sbjct: 202 PSDAIIPRATQKE---PNMVRPLNSYVPEMLPRIVYEAQYQKSETRSEVSFQSDYNPSIE 261

Query: 264 LSLKDTAEK-------------------YSSSQENVHVDHLESIFAALPPSFTSMVSNC- 318
           +  + T E+                   Y + Q         +   +LPPSFT+++S C 
Sbjct: 262 IFPRATEEEPNMVRFFDSSVPEVLPRPEYEAGQALYPSQSTLNQIPSLPPSFTTLLSGCF 321

[Close]

BLAST of CmaCh12G000320.1 vs. Swiss-Prot
Match: PHS1_MAIZE (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Zea mays GN=PHS1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 94/343 (27.41%), Postives = 151/343 (44.02%), Query Frame = 1


Query: 24  QWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQLLHHC 83
           +WEV+++R+   P    T+      + LR ++   R     +GTWI +S  A L + H  
Sbjct: 32  KWEVEYARYFGTPRRDPTAAPP---SGLRYIM---RGVHRHQGTWIPASCPASLCVCHPS 91

Query: 84  SASDF-ILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEASHD 143
             S   +L +   D + EEH++S L+FSWPQ+ C++  P RG+R +F S+ D   +    
Sbjct: 92  LPSAVPVLTISIGDVVFEEHFVSILNFSWPQVTCVTQCPIRGSRVVFVSFCDKFKQ---- 151

Query: 144 MFIRFCSSVIQKFALRFSTSCEIDSFVSILKEM--SKDARDIQPISCDFGSQIS--SELL 203
                    IQKFA+RF   C+ +SF+S ++    S    DI P   D+  + S  SE +
Sbjct: 152 ---------IQKFAVRFPQPCDAESFLSCVECSCGSSGTMDIIPFGSDYVCEDSSASEYI 211

Query: 204 CSN--TNRPSD--SLSEELSNSTVLQPYTPEMPLSLKDTAEKYSSSQENVHVDHLESIFA 263
            SN   +R  D  +L E+  + T+ +P       + +   E  S+S  + +        +
Sbjct: 212 VSNGLHHRLDDASNLEEQCFDHTIDEPPMNYHEETDQHVLEPLSASNTSNN--------S 271

Query: 264 ALPPSFTSMVSNCS------------------------DVKQGSTATPPSATKDNDLKS- 321
           A PPSF  M+ +CS                        D          +A K  D    
Sbjct: 272 AFPPSFNQMLKSCSIDYDQEEPCPLAASNHVLQEVYVLDTSHDVANEERTAGKGMDAAEG 331

[Close]

BLAST of CmaCh12G000320.1 vs. TrEMBL
Match: M5Y8M5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022200mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.6e-64
Identity = 147/303 (48.51%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 19  AAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQ 78
           +A+R+QWEV F+ F  YP    TS   D    L PL    R RRP    WISSSS A LQ
Sbjct: 26  SAVREQWEVHFALFFPYPPPPITSTCPD----LVPLDPKYRRRRP-LDRWISSSSLARLQ 85

Query: 79  LLHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADE 138
           L    S S+ +L V F DKILEEHY+SKLHF WPQ+ C+SGFPARGTR +F SYRD    
Sbjct: 86  LARDHSNSEVVLTVGFADKILEEHYVSKLHFIWPQVSCMSGFPARGTRAIFVSYRD---- 145

Query: 139 ASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELL 198
                    CS  IQKF  RF +  E + F++ LK + K+  D +P++ D GS+ISS+  
Sbjct: 146 ---------CSEEIQKFGFRFLSLQEAEKFMNALKGICKEGMDTEPVNTDVGSEISSQSE 205

Query: 199 CSNTNRPSDSLSEELSNSTVLQPYTPEM-PLSLKDTAEKYSSSQENVHVDHLESIFAALP 258
            +++NRP +   ++L+  T +Q YTP++ P  L + AE+YS +QE   +D+ +S FAALP
Sbjct: 206 LTSSNRPLNPACKDLTTMTPVQTYTPKISPSLLNNEAEQYSCTQEFTPIDNFQSNFAALP 265

Query: 259 PSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGD 318
           PSFTS +SNC  V +   AT P+ +++ DLKSQI + MED+SFQDML +VEK++ EIGGD
Sbjct: 266 PSFTSFLSNCGPVVE-QVATQPTGSQEVDLKSQIARYMEDASFQDMLFQVEKVISEIGGD 309

Query: 319 LAL 321
             L
Sbjct: 326 SML 309

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BLAST of CmaCh12G000320.1 vs. TrEMBL
Match: A0A072VAF2_MEDTR (Synapsis 1-like protein, putative OS=Medicago truncatula GN=MTR_2g079800 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62
Identity = 140/305 (45.90%), Postives = 196/305 (64.26%), Query Frame = 1


Query: 20  AIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQL 79
           ++ D+WE+ F+RF+ +P ++ TS+ + +D  L PL +  R+R PPRGTWISSS++A L+ 
Sbjct: 11  SLSDEWEISFARFIPFPHSSITSSSSSSD--LHPLPVRIRNR-PPRGTWISSSTSAFLRF 70

Query: 80  LHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEA 139
               + SD +L V F  K+LEEHY+SKL+FSWPQ+ C  GFPARG RT+  SYRDS  E 
Sbjct: 71  SSDLNFSDVVLTVAFNAKLLEEHYVSKLNFSWPQVSCDPGFPARGIRTVLVSYRDSRGE- 130

Query: 140 SHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELLC 199
                       IQKFA+RF +  E  SF+  LKE+ KD ++ +P++ DFGS+ISS+   
Sbjct: 131 ------------IQKFAMRFPSIYETQSFIGALKEILKDNKEPEPLNIDFGSEISSQSEF 190

Query: 200 SNTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEK----YSSSQENVHVDHLESIFAA 259
            +TN+ S   SEELS  T    Y P++P+ + +   +     S ++E   V + ESI  A
Sbjct: 191 MSTNKHSYRPSEELSFMTPADTYIPQIPICMNNEGVQPSGLGSQNKETAPVHNFESILPA 250

Query: 260 LPPSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIG 319
           LPPSF S + + S    G     P+ T++NDLKSQI K MEDSSFQDML +VEK++ EIG
Sbjct: 251 LPPSFASFLMDYS----GLNPAQPTVTEENDLKSQIAKYMEDSSFQDMLVKVEKVISEIG 295

Query: 320 GDLAL 321
           GD++L
Sbjct: 311 GDMSL 295

[Close]

BLAST of CmaCh12G000320.1 vs. TrEMBL
Match: A0A072TRM8_MEDTR (Synapsis 1-like protein, putative OS=Medicago truncatula GN=MTR_8g069560 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-59
Identity = 141/329 (42.86%), Postives = 201/329 (61.09%), Query Frame = 1


Query: 20  AIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQL 79
           ++ D+WE+ F+RF+ +P ++ TS+ +   ++L PL +  R+R PPRGTWISSS++A L+ 
Sbjct: 14  SLSDEWEISFARFIPFPHSSITSSSS---SDLHPLPVRLRNR-PPRGTWISSSTSAFLRF 73

Query: 80  LHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEA 139
               + SD +L V F  K+LEEHY+SKL+FSWPQ+ C  GFPARG RT+  SYRDS  + 
Sbjct: 74  SSDLNFSDVVLTVAFNAKLLEEHYVSKLNFSWPQVSCDPGFPARGIRTVLVSYRDSRGQ- 133

Query: 140 SHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELLC 199
                       IQKFA+RF +  E  SF+S LKE+ KD ++ +P++ DFGS+ISS+   
Sbjct: 134 ------------IQKFAMRFPSIYETQSFISALKEILKDDKEPEPLNIDFGSEISSQSEF 193

Query: 200 SNTN--------------RPSDSL----------SEELSNSTVLQPYTPEMPLSLKDTAE 259
            +TN              +PS+ L          S+ELS  T    Y P+MP+ + +   
Sbjct: 194 MSTNKHSYSFSVPDPTLQKPSEELSFMIPAASRPSQELSFMTPADTYIPQMPICMTNEGV 253

Query: 260 K----YSSSQENVHVDHLESIFAALPPSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQI 319
           +     S ++E   V + E+I  ALPPSF S + +CS    G     P+ T++NDLKSQI
Sbjct: 254 QPSGLGSQNKETAPVHNFENILPALPPSFASFLMDCS----GLNHAQPTVTEENDLKSQI 313

Query: 320 MKCMEDSSFQDMLNRVEKIVGEIGGDLAL 321
            K MEDSSFQDML +VEK++ EIGGD++L
Sbjct: 314 AKYMEDSSFQDMLVKVEKVISEIGGDMSL 321

[Close]

BLAST of CmaCh12G000320.1 vs. TrEMBL
Match: A0A061E6E2_THECC (Poor ous synapsis 1, putative isoform 1 OS=Theobroma cacao GN=TCM_010474 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.0e-58
Identity = 138/314 (43.95%), Postives = 197/314 (62.74%), Query Frame = 1


Query: 8   EQSKEEAEMPFAAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGT 67
           E +++E + P   I+DQW+V F+RF+ YP+  ST        +L PL  N R R P  G 
Sbjct: 9   ETNRQENDKPVNTIKDQWQVLFARFMNYPSLPSTC------PSLVPLPKNRRFRAP-EGN 68

Query: 68  WISSSSTAV-LQLLHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTR 127
           WI++S  A  LQ++   S S+ IL V   +KILEEHY+SKLHFSWPQ+ CI  FPARG+R
Sbjct: 69  WIATSFPAASLQIISDLSGSETILVVCLSEKILEEHYISKLHFSWPQVQCIPEFPARGSR 128

Query: 128 TMFGSYRDSADEASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPIS 187
           ++F SY+DSA E             IQKFALRFST  E++SF++ L+E  +   +I+P+ 
Sbjct: 129 SVFVSYKDSAYE-------------IQKFALRFSTLREVESFMNTLRETLRVGDEIEPLQ 188

Query: 188 CDFGSQISSELLCSNTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYSSSQENVHV 247
            DFGS  S++    ++N     + +ELS+ T    YTP+M  SL    E+ S  Q+ +  
Sbjct: 189 RDFGSDFSTQTEFISSNGLPSRVCQELSDMTAGNSYTPQMDPSLSYEIEQQSFDQDAMLN 248

Query: 248 DHLESIFAALPPSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNR 307
            + E IF ALPPSFTS++++C    +   A  P+ +++ DLKSQI++ MEDSSFQDML++
Sbjct: 249 HNCEGIFPALPPSFTSLLTDCRSAAE-QAAKQPTVSEEIDLKSQIVRYMEDSSFQDMLSK 301

Query: 308 VEKIVGEIGGDLAL 321
           VEKI+ E+  D+ L
Sbjct: 309 VEKIINEVEADMVL 301

[Close]

BLAST of CmaCh12G000320.1 vs. TrEMBL
Match: B9HTU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s05480g PE=4 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57
Identity = 149/323 (46.13%), Postives = 200/323 (61.92%), Query Frame = 1


Query: 3   GFEGGEQSKEEAEMPFAAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRR 62
           G EGGE   EE  +P A   DQW+V FSRF+ YP+  ST        +L PL  N R  R
Sbjct: 14  GHEGGE---EEQRVPSAIPTDQWQVTFSRFINYPSLPSTC------PSLIPLPHN-RKFR 73

Query: 63  PPRGTWISS-SSTAVLQLLHHCSAS-DFILAVRFRDKILEEHYLSKLHFSWPQMCCISGF 122
           P RGTWISS S+TA LQLL++ S S D IL +     +LEEHY+ KLHFSWPQ+ C+SG+
Sbjct: 74  PTRGTWISSVSATASLQLLNYQSNSKDAILGLSLNGTVLEEHYVWKLHFSWPQVSCVSGY 133

Query: 123 PARGTRTMFGSYRDSADEASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDAR 182
           P+RGTR +F +++DS DE             IQKF  RFST  E ++F++ LK + +D  
Sbjct: 134 PSRGTRAVFVTFKDSLDE-------------IQKFGFRFSTFSEAEAFINALKVILEDPI 193

Query: 183 DIQPISCDFGSQISSELLCSNTN--RPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYS 242
           + + +  DF S ISS+ +   T+  +P   + EE S    +Q Y+P++ LS    AE+ S
Sbjct: 194 ETERLDSDFQSAISSQSVFMPTDGYKPRAWVEEESSTMGPVQDYSPQLQLSWNKEAEQAS 253

Query: 243 SSQENVHVDHLESIFAALPPSFTSMVSN-CSDVKQGSTATPPSATKDNDLKSQIMKCMED 302
            S E     + E I   +PPSFTS++ + CS+VKQG     PS++   DLKSQIMK MED
Sbjct: 254 LSTEKSLNHNNEGISPVMPPSFTSLLLDCCSEVKQGQ----PSSSHAIDLKSQIMKYMED 309

Query: 303 SSFQDMLNRVEKIVGEIGGDLAL 321
           SSFQDML++VEK++ E+G DL L
Sbjct: 314 SSFQDMLSKVEKVINELGDDLML 309

[Close]

BLAST of CmaCh12G000320.1 vs. TAIR10
Match: AT1G10710.1 (AT1G10710.1 poor homologous synapsis 1)

HSP 1 Score: 142.1 bits (357), Expect = 5.8e-34
Identity = 118/350 (33.71%), Postives = 163/350 (46.57%), Query Frame = 1


Query: 24  QWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWIS-SSSTAVLQLLHH 83
           +W + F+RFV YP++ S          L+PL         P GTW+S SSST  L ++  
Sbjct: 22  RWTIGFARFVHYPSSPSPH------PVLKPLG-KREQYHSPHGTWLSASSSTVSLHIVDE 81

Query: 84  CSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEASHD 143
            + SD IL+V+   K+LEEHY+SKL+F+WPQM C+SGFP+RG+R +F +Y DSA++    
Sbjct: 82  LNRSDVILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQ---- 141

Query: 144 MFIRFCSSVIQKFALRFSTSCEIDSF-------VSILKEMSKDAR------------DIQ 203
                    IQKFALRFST      F       +  LKE S   +            D  
Sbjct: 142 ---------IQKFALRFSTCDAALEFVEALKEKIKGLKEASTQNQKNKTRCDVSFQSDYN 201

Query: 204 PISCDFGSQISSELLCSNTNRPSDSL----------------SEELSNSTVLQPYTPEMP 263
           P           E    N  RP +S                 SE  S  +    Y P + 
Sbjct: 202 PSDAIIPRATQKE---PNMVRPLNSYVPEMLPRIVYEAQYQKSETRSEVSFQSDYNPSIE 261

Query: 264 LSLKDTAEK-------------------YSSSQENVHVDHLESIFAALPPSFTSMVSNC- 316
           +  + T E+                   Y + Q         +   +LPPSFT+++S C 
Sbjct: 262 IFPRATEEEPNMVRFFDSSVPEVLPRPEYEAGQALYPSQSTLNQIPSLPPSFTTLLSGCF 321

[Close]

BLAST of CmaCh12G000320.1 vs. NCBI nr
Match: gi|1009153431|ref|XP_015894631.1| (PREDICTED: uncharacterized protein LOC107428583 [Ziziphus jujuba])

HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64
Identity = 153/322 (47.52%), Postives = 206/322 (63.98%), Query Frame = 1


Query: 1   MAGFEGGEQSKEEAEMPFAAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARS 60
           +A     EQ+ E+ ++      ++WEV+FSRF  YP  TST  D      L PL    R+
Sbjct: 9   LALIAASEQTPEK-KLAIGGGGERWEVEFSRFFNYPPMTSTWPD------LVPLPSKVRN 68

Query: 61  RRPPRGTWISSSSTAVLQLLHHCSASD-FILAVRFRDKILEEHYLSKLHFSWPQMCCISG 120
           RRP  GTWISSSS  +LQLL H S SD  +L V FRD ILEEHY+SKLHFSWPQ+ C+SG
Sbjct: 69  RRPS-GTWISSSSHVLLQLLPHPSNSDDVVLRVYFRDSILEEHYVSKLHFSWPQVSCLSG 128

Query: 121 FPARGTRTMFGSYRDSADEASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDA 180
           FPARGTR +F SYRD   E             +QKFALRFST  E + FVS LKE+ K  
Sbjct: 129 FPARGTRAVFASYRDGVGE-------------VQKFALRFSTIYETERFVSALKEIFKVE 188

Query: 181 RDIQPISCDFGSQISSELLCSNTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYSS 240
           RD   ++C FGS+ISS+    ++N      +E+ + +   + YTPE P S  + AE+YS 
Sbjct: 189 RDTGLVTCGFGSEISSQSEFISSNTTLYRANEDFNVTNPAETYTPEFPPSSNNLAEQYSC 248

Query: 241 SQENVHVDHLESIFAALPPSFTSMVSNC-SDVKQGSTATPPSATKDNDLKSQIMKCMEDS 300
           +++ V   + + +F+ALPPSFTS++ NC SDV+Q +     S  ++ ++KSQI++ MEDS
Sbjct: 249 TKDTVPPCNFDVLFSALPPSFTSLMENCSSDVEQTAAQPILSQPQEVNIKSQIVRYMEDS 308

Query: 301 SFQDMLNRVEKIVGEIGGDLAL 321
           +FQDML +VEK++ E+GGDL L
Sbjct: 309 TFQDMLVKVEKVLQEMGGDLVL 309

[Close]

BLAST of CmaCh12G000320.1 vs. NCBI nr
Match: gi|645230548|ref|XP_008221985.1| (PREDICTED: uncharacterized protein LOC103321910 [Prunus mume])

HSP 1 Score: 253.1 bits (645), Expect = 6.7e-64
Identity = 148/303 (48.84%), Postives = 196/303 (64.69%), Query Frame = 1


Query: 19  AAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQ 78
           +A+R+QWEV F+RF  YP     S   D    L PL    R RRP    WISSSS A LQ
Sbjct: 46  SAVREQWEVHFARFFPYPPPPIISTCPD----LVPLDPKYRRRRP-LDRWISSSSLARLQ 105

Query: 79  LLHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADE 138
           L    S SD +L V F DKILEEHY+SKLHF WPQ+ C+SGF ARGTR +F SYRD +DE
Sbjct: 106 LARDHSNSDVVLTVGFADKILEEHYVSKLHFIWPQVSCMSGFLARGTRAIFVSYRDCSDE 165

Query: 139 ASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELL 198
                        IQKF  RF +  E + F++ LK + K+  D +P++ D GS+ISS+  
Sbjct: 166 -------------IQKFGFRFLSLHEAEKFMNALKGICKEGMDTEPVNTDIGSEISSQSE 225

Query: 199 CSNTNRPSDSLSEELSNSTVLQPYTPEM-PLSLKDTAEKYSSSQENVHVDHLESIFAALP 258
            +++NRP +   ++L+  T +Q YTP++ P  L + AE+YS +QE   +D+L+S FAALP
Sbjct: 226 LTSSNRPLNPACKDLTTMTPVQTYTPKISPSLLNNEAEQYSCTQEFTPIDNLQSNFAALP 285

Query: 259 PSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGD 318
           PSFTS +SNC  V +   AT P+ +++ DLKSQI + MED+SFQDML +VEK++ EIGGD
Sbjct: 286 PSFTSFLSNCGRVVE-QVATQPTGSQEVDLKSQIARYMEDASFQDMLFQVEKVISEIGGD 329

Query: 319 LAL 321
             L
Sbjct: 346 SML 329

[Close]

BLAST of CmaCh12G000320.1 vs. NCBI nr
Match: gi|596296432|ref|XP_007227171.1| (hypothetical protein PRUPE_ppa022200mg [Prunus persica])

HSP 1 Score: 253.1 bits (645), Expect = 6.7e-64
Identity = 147/303 (48.51%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 19  AAIRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQ 78
           +A+R+QWEV F+ F  YP    TS   D    L PL    R RRP    WISSSS A LQ
Sbjct: 26  SAVREQWEVHFALFFPYPPPPITSTCPD----LVPLDPKYRRRRP-LDRWISSSSLARLQ 85

Query: 79  LLHHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADE 138
           L    S S+ +L V F DKILEEHY+SKLHF WPQ+ C+SGFPARGTR +F SYRD    
Sbjct: 86  LARDHSNSEVVLTVGFADKILEEHYVSKLHFIWPQVSCMSGFPARGTRAIFVSYRD---- 145

Query: 139 ASHDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELL 198
                    CS  IQKF  RF +  E + F++ LK + K+  D +P++ D GS+ISS+  
Sbjct: 146 ---------CSEEIQKFGFRFLSLQEAEKFMNALKGICKEGMDTEPVNTDVGSEISSQSE 205

Query: 199 CSNTNRPSDSLSEELSNSTVLQPYTPEM-PLSLKDTAEKYSSSQENVHVDHLESIFAALP 258
            +++NRP +   ++L+  T +Q YTP++ P  L + AE+YS +QE   +D+ +S FAALP
Sbjct: 206 LTSSNRPLNPACKDLTTMTPVQTYTPKISPSLLNNEAEQYSCTQEFTPIDNFQSNFAALP 265

Query: 259 PSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGD 318
           PSFTS +SNC  V +   AT P+ +++ DLKSQI + MED+SFQDML +VEK++ EIGGD
Sbjct: 266 PSFTSFLSNCGPVVE-QVATQPTGSQEVDLKSQIARYMEDASFQDMLFQVEKVISEIGGD 309

Query: 319 LAL 321
             L
Sbjct: 326 SML 309

[Close]

BLAST of CmaCh12G000320.1 vs. NCBI nr
Match: gi|1012099161|ref|XP_015956892.1| (PREDICTED: uncharacterized protein LOC107481188 [Arachis duranensis])

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 146/303 (48.18%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 21  IRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQLL 80
           IRDQWE+ F+RFV YPT++ +S+       L PL    R+R P RG WISS S A L+LL
Sbjct: 20  IRDQWEICFARFVPYPTSSPSSS-----AGLLPLPPRLRNRSP-RGNWISSPSVAFLRLL 79

Query: 81  HHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEAS 140
              S  D IL V F   +LEEHY+SKLHFSWPQ+ C+SGFPARG RT+  S+RDS  E  
Sbjct: 80  PDLSHRDVILTVSFNASLLEEHYVSKLHFSWPQVSCVSGFPARGIRTVLVSFRDSVGE-- 139

Query: 141 HDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELLCS 200
                      IQKFALRF +  E  SFV+ILK + KD +D +P++ DFGS+ISS+    
Sbjct: 140 -----------IQKFALRFPSLYEAQSFVNILKGLLKDEKDPEPLNTDFGSEISSQSEFV 199

Query: 201 NTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYSSSQENVHVD---HLESIFAALP 260
           ++N+     SEE S  T +  Y P+MP S+K T EK SS  + +       +  I  ALP
Sbjct: 200 SSNKHCHRPSEEASFMTPVDTYKPQMPRSIK-TEEKQSSGTQEMEAPPGFSIAGILPALP 259

Query: 261 PSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGD 320
           PSFT+++ +CS++      T P A+++ +LKSQI++ MEDSSFQDML +VEK++ E+GGD
Sbjct: 260 PSFTTLLMDCSEINH----TQPIASQEIELKSQIVRYMEDSSFQDMLVKVEKVIDELGGD 298

[Close]

BLAST of CmaCh12G000320.1 vs. NCBI nr
Match: gi|1021500800|ref|XP_016193615.1| (PREDICTED: protein POOR HOMOLOGOUS SYNAPSIS 1 [Arachis ipaensis])

HSP 1 Score: 247.7 bits (631), Expect = 2.8e-62
Identity = 146/303 (48.18%), Postives = 194/303 (64.03%), Query Frame = 1


Query: 21  IRDQWEVQFSRFVCYPTTTSTSNDTDTDTNLRPLLLNARSRRPPRGTWISSSSTAVLQLL 80
           IRDQWE+ F+RFV YPT++ +S+       L PL    RSR P RG WISS S A L+LL
Sbjct: 20  IRDQWEICFARFVPYPTSSPSSS-----AGLLPLPPRLRSRSP-RGNWISSPSVAFLRLL 79

Query: 81  HHCSASDFILAVRFRDKILEEHYLSKLHFSWPQMCCISGFPARGTRTMFGSYRDSADEAS 140
              S  D IL V F   +LEEHY+SKLHFSWPQ+ C+SGFPARG RT+  S+RDS  E  
Sbjct: 80  PDLSHRDVILTVSFNASLLEEHYVSKLHFSWPQVSCVSGFPARGIRTVLVSFRDSVGE-- 139

Query: 141 HDMFIRFCSSVIQKFALRFSTSCEIDSFVSILKEMSKDARDIQPISCDFGSQISSELLCS 200
                      IQKFALRF +  E  SFV+ILK + KD +D +P++ DFGS+ISS+    
Sbjct: 140 -----------IQKFALRFPSLYEAQSFVNILKGLLKDEKDPEPLNTDFGSEISSQSEFV 199

Query: 201 NTNRPSDSLSEELSNSTVLQPYTPEMPLSLKDTAEKYSSSQENVHVD---HLESIFAALP 260
           ++N+     SEE S  T +  Y P+MP S+K T EK  S  + +       +  I  ALP
Sbjct: 200 SSNKHCHRPSEEASFMTPVDTYKPQMPRSIK-TEEKQPSGTQEMEAPPGFSIAGILPALP 259

Query: 261 PSFTSMVSNCSDVKQGSTATPPSATKDNDLKSQIMKCMEDSSFQDMLNRVEKIVGEIGGD 320
           PSFT+++ +CS++      T P A+++ +LKSQI++ MEDSSFQDML +VEK++ E+GGD
Sbjct: 260 PSFTTLLMDCSEINH----TQPIASQEIELKSQIVRYMEDSSFQDMLVKVEKVIDELGGD 298

The following BLAST results are available for this feature:

BLAST of CmaCh12G000320.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POHS1_ARATH	1.6e-33	33.81	Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1	[more]
PHS1_MAIZE	1.5e-18	27.41	Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Zea mays GN=PHS1 PE=1 SV=1	[more]

BLAST of CmaCh12G000320.1 vs. TrEMBL


Match Name	E-value	Identity	Description
M5Y8M5_PRUPE	4.6e-64	48.51	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022200mg PE=4 SV=1	[more]
A0A072VAF2_MEDTR	7.4e-62	45.90	Synapsis 1-like protein, putative OS=Medicago truncatula GN=MTR_2g079800 PE=4 SV...	[more]
A0A072TRM8_MEDTR	2.6e-59	42.86	Synapsis 1-like protein, putative OS=Medicago truncatula GN=MTR_8g069560 PE=4 SV...	[more]
A0A061E6E2_THECC	5.0e-58	43.95	Poor ous synapsis 1, putative isoform 1 OS=Theobroma cacao GN=TCM_010474 PE=4 SV...	[more]
B9HTU7_POPTR	1.9e-57	46.13	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s05480g PE=4 SV=2	[more]

BLAST of CmaCh12G000320.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10710.1	5.8e-34	33.71	poor homologous synapsis 1	[more]

BLAST of CmaCh12G000320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009153431\|ref\|XP_015894631.1\|	3.9e-64	47.52	PREDICTED: uncharacterized protein LOC107428583 [Ziziphus jujuba]	[more]
gi\|645230548\|ref\|XP_008221985.1\|	6.7e-64	48.84	PREDICTED: uncharacterized protein LOC103321910 [Prunus mume]	[more]
gi\|596296432\|ref\|XP_007227171.1\|	6.7e-64	48.51	hypothetical protein PRUPE_ppa022200mg [Prunus persica]	[more]
gi\|1012099161\|ref\|XP_015956892.1\|	1.6e-62	48.18	PREDICTED: uncharacterized protein LOC107481188 [Arachis duranensis]	[more]
gi\|1021500800\|ref\|XP_016193615.1\|	2.8e-62	48.18	PREDICTED: protein POOR HOMOLOGOUS SYNAPSIS 1 [Arachis ipaensis]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G000320	CmaCh12G000320	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G000320.1	CmaCh12G000320.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G000320.1.three_prime_UTR.1	CmaCh12G000320.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G000320.1.CDS.8	CmaCh12G000320.1.CDS.8	CDS
CmaCh12G000320.1.CDS.7	CmaCh12G000320.1.CDS.7	CDS
CmaCh12G000320.1.CDS.6	CmaCh12G000320.1.CDS.6	CDS
CmaCh12G000320.1.CDS.5	CmaCh12G000320.1.CDS.5	CDS
CmaCh12G000320.1.CDS.4	CmaCh12G000320.1.CDS.4	CDS
CmaCh12G000320.1.CDS.3	CmaCh12G000320.1.CDS.3	CDS
CmaCh12G000320.1.CDS.2	CmaCh12G000320.1.CDS.2	CDS
CmaCh12G000320.1.CDS.1	CmaCh12G000320.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G000320.1.exon.8	CmaCh12G000320.1.exon.8	exon
CmaCh12G000320.1.exon.7	CmaCh12G000320.1.exon.7	exon
CmaCh12G000320.1.exon.6	CmaCh12G000320.1.exon.6	exon
CmaCh12G000320.1.exon.5	CmaCh12G000320.1.exon.5	exon
CmaCh12G000320.1.exon.4	CmaCh12G000320.1.exon.4	exon
CmaCh12G000320.1.exon.3	CmaCh12G000320.1.exon.3	exon
CmaCh12G000320.1.exon.2	CmaCh12G000320.1.exon.2	exon
CmaCh12G000320.1.exon.1	CmaCh12G000320.1.exon.1	exon