CmaCh11G018790.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G018790.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_91
Location	Cma_Chr11 : 12469561 .. 12470247 (+)
Sequence length	687

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGACGAGCGTGTAGATCCACCCACGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGTGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATGTCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCAAGAGAGATCTGACTCAGATGTCAGAGACGATGCCGTTCGCCGGTCGAAGAAGCTGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGGCGATTGATGCCATTGTTTGATGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTCGAGGAGATTAACGATGAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

mRNA sequence

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGACGAGCGTGTAGATCCACCCACGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGTGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATGTCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCAAGAGAGATCTGACTCAGATGTCAGAGACGATGCCGTTCGCCGGTCGAAGAAGCTGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGGCGATTGATGCCATTGTTTGATGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTCGAGGAGATTAACGATGAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Coding sequence (CDS)

ATGGTTGTTCCTCTCGGACCCGGCAAGTTCTACGGCAGCAGTCTCCCCCGTCCCCGCTACTACACCGACGTCAAGTTCAACGACGAGCGTGTAGATCCACCCACGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGTGGTCTCAGCTTCAATCGCCTGAGACTTCAGGGTCGAATCGAAGGCAATGTCAACAAGCTTCGAACTGAGCGTGAGAAGATTGCTAAGAAGAAGAAAGTAGAGACGCAAGAGAGATCTGACTCAGATGTCAGAGACGATGCCGTTCGCCGGTCGAAGAAGCTGAAATCAGTATCACCACCGCCAGTGCCAATTGCAACGAAGAGACGGCGATTGATGCCATTGTTTGATGCTGAGGATGATGATGTTGGTGAGCACAAGGAAGAAATTAGGGTTGTGAAGAGGAGATTGGTGAAGAAGCTGGGAGATGATTTCGATCGAGTCGCTGTGGAGGGGAAGAAGAACCAGTTGAAAGGTTCGAGGGATCGAAATTTGGAAGTCAATGGGATCGATGAATCTGTAATGAAGATTGTCGAGGAGATTAACGATGAAAGTACAAAGGGGAAGAGTAGTGGAAAAAAACTGGAAAATGATTCAATTTCTGCCACTAGAACTTCTCCCAGATTAGCTAATAAGCGTAGATCAAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRLRLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVNGIDESVMKIVEEINDESTKGKSSGKKLENDSISATRTSPRLANKRRSN

Homology

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BLAST of CmaCh11G018790.1 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.2e-83
Identity = 172/241 (71.37%), Postives = 201/241 (83.40%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKK----KVET-QERSDSDVRDDAVRRSKKLKSVSPPPV 120
           RLQGRIEGNV+KLRTEREK+AKKK    K+++  +RSD D   DA R+ KK +SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ ++DD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDESTKGK--------SSGKKLENDSISATRTSPRLANKRRS 229
           + E+NG++ESVMKIVEEIN+E+TK K         +G  +E+ S+S +R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

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BLAST of CmaCh11G018790.1 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.7e-56
Identity = 139/251 (55.38%), Postives = 166/251 (66.14%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVKFNDERVDPPTPVLDP LSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVR-DDAVRRSKKL---KSVSPPPVP 120
           R QGRIEG+V+KLR EREK+ +K+K E ++ + S     D V   +K+      SPPP P
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDLVGSERKMVDSDEDSPPPAP 120

Query: 121 IATKRRRLMPLFDAEDDDVGEHKEE------IRVVKRRLVKKLGDDFDRVAVEGKKNQL- 180
           IATKRRR M L D +++D  E +EE      +RV +RRLVKKLGDDFDRVA E +K    
Sbjct: 121 IATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADRS 180

Query: 181 ------KGSRDRN--LEVNGIDESVMKIVEEINDESTKGKSS------GKKL--ENDSIS 225
                  GSR R   LE N   E+VM +VEE+N  ++ GK S      GK         +
Sbjct: 181 PSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSESPPA 240

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BLAST of CmaCh11G018790.1 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.0e-54
Identity = 131/246 (53.25%), Postives = 161/246 (65.45%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD KFN +RVDPP PVLDP LSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
           RLQGRIEGNV +L+ +REK+ K          DS  +   ++++K+  SVSPPP P+A K
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK----------DSPDKAHIIKKNKRDASVSPPPAPVAVK 120

Query: 121 RRRLMPLFD-----AEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           RRR + L D      E+D++ E +EE RV+++   +KLGDDF+RVA  G        R+R
Sbjct: 121 RRRFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVASNG---VAVSKRER 180

Query: 181 NLEVNGIDESVMKIVEEINDES----------TKGKSSGKKLENDSI---SATRTSPRLA 229
           +   +GI   VM IVEE+N ES           K KS  K L+N  +   S TRTSPRLA
Sbjct: 181 SFS-DGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVEGQSGTRTSPRLA 232

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BLAST of CmaCh11G018790.1 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 125/236 (52.97%), Postives = 158/236 (66.95%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTDVKFN +RVDPP PV DPFLSWA EAHWSMGG SF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDVKFNSDRVDPPVPVTDPFLSWAQEAHWSMGGHSFQRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
           RLQGRIEG+VNKLR  REK AK   ++ +    S+ ++D     K++ S SPPP P   K
Sbjct: 61  RLQGRIEGSVNKLRKFREKEAK---LQARNSPASNKKND---NGKRVGSASPPPAPKVIK 120

Query: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
           RRR M L D E ++  E +   +V K++ V+KL  DF++VA E  +N+ K S        
Sbjct: 121 RRRFMDLMDEESEEEEEEEIVEKVKKKKSVRKLVGDFEKVATESVENKGKAS-------G 180

Query: 181 GIDESVMKIVEEINDESTKGK--------SSGKKLENDSISATRTSPRLANKRRSN 229
           GID++VMK+VEE+N E++ GK         S K+  +  ++  RTSPRLA +R S+
Sbjct: 181 GIDDAVMKVVEEVNRENSVGKKLRRGKKGKSNKENGSSPVNGVRTSPRLAKQRSSH 223

[Close]

BLAST of CmaCh11G018790.1 vs. TrEMBL
Match: A0A0D2VYT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G128300 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-49
Identity = 128/240 (53.33%), Postives = 157/240 (65.42%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVV LGPGKFYGSSLPRPR YTD KFN ERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 72  MVVSLGPGKFYGSSLPRPRIYTDTKFNPERVDPPVPVLDPLLSWADEAHWSMGGLSFKRL 131

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERS---DSDVRDDAVRRSKKLKSVSPPPVPI 120
           RLQGRIEGNV +L+ +R+K+ K    +T +R       +RDD     +  + VSPPP P+
Sbjct: 132 RLQGRIEGNVKRLKAQRKKLLK----DTPDRGLNLKKSLRDD-----EDDEDVSPPPAPV 191

Query: 121 ATKRRRLMPLFDAED---DDVGEHKEEIRVVKRR--------LVKKLGDDFDRVAVEGKK 180
           A KRRR + L D +D   ++ G+  EE+ V KR+         V+KLGDDF+RVA   K 
Sbjct: 192 AVKRRRFLDLNDDDDTESENKGDDDEEVTVAKRKKKRVLRNGAVRKLGDDFERVA---KN 251

Query: 181 NQLKGSRDRNLEVNGIDESVMKIVEEINDESTKGKSSGKKLENDSISATRTSPRLANKRR 227
           + L   R RN   +GI   V K+VEE+NDE  + +   KK E  S   +RTSPRLA + R
Sbjct: 252 SGLVSKRGRNFS-DGIGSDVKKMVEEVNDE-PESEEDKKKTEAQS-GRSRTSPRLARRGR 296

[Close]

BLAST of CmaCh11G018790.1 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 98/226 (43.36%), Postives = 141/226 (62.39%), Query Frame = 1


Query: 3   VPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + KFND RVDPP  VLDP LSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATKRR 122
           QGRIEGNVNKLR + EK              + V+ ++ R+ K+  S SPP  PI  KRR
Sbjct: 69  QGRIEGNVNKLRAQLEK-------------STPVKLESGRKKKRSGSESPPSAPIVVKRR 128

Query: 123 RLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVNGI 182
           R + L D++D++VG   E +  ++R    KL DDFDRVA E K   ++ ++ ++++   +
Sbjct: 129 RYLDLNDSDDEEVGSEDEGVVRIRR----KLSDDFDRVAEESKTKLVEANK-KSIKSEFV 188

Query: 183 DESVMKIVEEINDESTKGKSSGKKLENDSISATRTSPRLANKRRSN 229
           ++   +++E+            K ++ +  S+TR+SPRLA KR SN
Sbjct: 189 EKK--RLIEK-----------KKIVKVNKTSSTRSSPRLA-KRSSN 202

[Close]

BLAST of CmaCh11G018790.1 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.3e-07
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1


Query: 7  PGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWA 46
          P  FY + LPRPR++ + +FN  RVD P  VLDP LSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

[Close]

BLAST of CmaCh11G018790.1 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 4.6e-83
Identity = 172/241 (71.37%), Postives = 201/241 (83.40%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVKFNDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKK----KVET-QERSDSDVRDDAVRRSKKLKSVSPPPV 120
           RLQGRIEGNV+KLRTEREK+AKKK    K+++  +RSD D   DA R+ KK +SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           PIATKRRRLM LF+ ++DD+G  KEEI VVKRRLVKKLGDDFDRVA E K++QLKG +DR
Sbjct: 121 PIATKRRRLMVLFE-DEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDESTKGK--------SSGKKLENDSISATRTSPRLANKRRS 229
           + E+NG++ESVMKIVEEIN+E+TK K         +G  +E+ S+S +R+SPRLANKR  
Sbjct: 181 SSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRAL 240

[Close]

BLAST of CmaCh11G018790.1 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 6.0e-83
Identity = 175/239 (73.22%), Postives = 197/239 (82.43%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK NDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKK-KVE----TQERSDSDVRDDAVRRSKKLKSVSPPPV 120
           RLQGRIEGNV+KLR EREK+AKKK K E      +RSD D   DA R+ KK +SV+PPP 
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDR 180
           P+ATKRRRLM LF+ ++DDVG  KEEI VVKRRLVKKLGDDFDRVA E K+NQLKG +DR
Sbjct: 121 PVATKRRRLMVLFE-DEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180

Query: 181 NLEVNGIDESVMKIVEEINDEST---------KGKSSGKKLENDSISATRTSPRLANKR 226
           + E+N ++ESVMKIVEEIN+E+T         KGK+ G K+E+ S+S TRTSPRLANKR
Sbjct: 181 SSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANKR 237

[Close]

BLAST of CmaCh11G018790.1 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 227.6 bits (579), Expect = 2.1e-56
Identity = 143/258 (55.43%), Postives = 171/258 (66.28%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVK NDERVDPP PVLDPFLSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
           RLQGRIEG+V KL+ EREK AK+ K+ T     S     ++  SK+  S+SPP  P+ATK
Sbjct: 61  RLQGRIEGSVKKLQAEREKFAKRSKIVTGSSIGS---GSSMSDSKRAVSISPPAAPMATK 120

Query: 121 RRRLMPLFDAEDDDVG----EHKEEI------RVVKRRLVKKLGDDFDRVAVE---GKKN 180
           RRRLM L D +DDD      E +EE+      R VKRRLVK+L DDFDRVA E   GK +
Sbjct: 121 RRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAERGKGS 180

Query: 181 QLKG---------SRDRNL---EVNGIDESVMKIVEEINDESTKG---KSSGKKLEND-- 225
            LKG         SR R+    E + + E+VMK+VEE+   + KG   K  G K + +  
Sbjct: 181 PLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKGQGNGG 240

[Close]

BLAST of CmaCh11G018790.1 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 225.7 bits (574), Expect = 8.1e-56
Identity = 139/251 (55.38%), Postives = 166/251 (66.14%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVKFNDERVDPPTPVLDP LSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVR-DDAVRRSKKL---KSVSPPPVP 120
           R QGRIEG+V+KLR EREK+ +K+K E ++ + S     D V   +K+      SPPP P
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDLVGSERKMVDSDEDSPPPAP 120

Query: 121 IATKRRRLMPLFDAEDDDVGEHKEE------IRVVKRRLVKKLGDDFDRVAVEGKKNQL- 180
           IATKRRR M L D +++D  E +EE      +RV +RRLVKKLGDDFDRVA E +K    
Sbjct: 121 IATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADRS 180

Query: 181 ------KGSRDRN--LEVNGIDESVMKIVEEINDESTKGKSS------GKKL--ENDSIS 225
                  GSR R   LE N   E+VM +VEE+N  ++ GK S      GK         +
Sbjct: 181 PSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSESPPA 240

[Close]

BLAST of CmaCh11G018790.1 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba])

HSP 1 Score: 223.8 bits (569), Expect = 3.1e-55
Identity = 143/258 (55.43%), Postives = 169/258 (65.50%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVK NDERVDPP PVLDPFLSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
           RLQGRIEG V KL+ EREK AK+ K+       S     ++  SK+  S+SPP  P+ATK
Sbjct: 61  RLQGRIEGCVKKLQAEREKFAKRSKIVAGSSIGS---GSSMSDSKRAVSISPPAAPMATK 120

Query: 121 RRRLMPLFDAEDDDVG----EHKEEI------RVVKRRLVKKLGDDFDRVAVE---GKKN 180
           RRRLM L D +DDD      E +EE+      R VKRRLVK+L DDFDRVA E   GK +
Sbjct: 121 RRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAERGKGS 180

Query: 181 QLKG---------SRDRNL---EVNGIDESVMKIVEEINDESTKGK------SSGK---K 225
            LKG         SR R+    E + + E+VMK+VEE+   + KGK      S GK    
Sbjct: 181 PLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKGKGNGG 240

The following BLAST results are available for this feature:

BLAST of CmaCh11G018790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh11G018790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4_CUCSA	3.2e-83	71.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
W9R4I2_9ROSA	5.7e-56	55.38	Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1	[more]
A0A061EAW7_THECC	9.0e-54	53.25	Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4...	[more]
B9RVZ1_RICCO	1.3e-52	52.97	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1	[more]
A0A0D2VYT4_GOSRA	1.0e-49	53.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G128300 PE=4 SV=1	[more]

BLAST of CmaCh11G018790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28310.1	1.5e-39	43.36	unknown protein	[more]
AT1G52270.1	4.3e-07	56.41	unknown protein	[more]

BLAST of CmaCh11G018790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438098\|ref\|XP_004136827.1\|	4.6e-83	71.37	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]	[more]
gi\|659110606\|ref\|XP_008455314.1\|	6.0e-83	73.22	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]
gi\|1009165334\|ref\|XP_015900977.1\|	2.1e-56	55.43	PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]	[more]
gi\|703073457\|ref\|XP_010089552.1\|	8.1e-56	55.38	hypothetical protein L484_004788 [Morus notabilis]	[more]
gi\|1009129728\|ref\|XP_015881923.1\|	3.1e-55	55.43	PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G018790	CmaCh11G018790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G018790.1	CmaCh11G018790.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G018790.1.exon.1	CmaCh11G018790.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G018790.1.CDS.1	CmaCh11G018790.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 70..90 scor
None	No IPR available	PANTHER	PTHR35103	FAMILY NOT NAMED	coord: 1..226 score: 3.2
None	No IPR available	PANTHER	PTHR35103:SF1	SUBFAMILY NOT NAMED	coord: 1..226 score: 3.2