CmaCh11G013550.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGGGGTTTGATTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCCTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTCCTCGCCTGAGACGATATCAGAGCTCAAGAAGCAACCATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGTGCGGCTGGTTTCCCTTGTTCTTACAATTTTAATATCGAAACGAATCCAGAACGTCTATATCACCTTGATTGTTTGTTATCTCGCTCTTTGTTCCTTCTCGCCGTTTGTTAGGTTTGATTGTTTAATCCAATTTGTTAGAACTTGTGTTCATAACAATGAAATAGGAAAGTTTAACCAGAAATGGATGTCTGCAAACGACATATTGAACGAAAGACTGGGTCATAGAAGCTTATTCTAGGATCAACTATGGTAGTATGAATGTTGGGCACCTGTTATCTTGAGGCCTGCTGCAAATTTTTTAGCGAGTTATATTGTTGTAATCTATTGGAAATCGAAATCTAACAGAACAGCTTCTAAATTTTGAAATACCTTCTTTAGGAGTAAGCATTGTATCAATCATGTCACTCACTACTACATAAGTAATCAACAGTTCAGGTAACTTGACTTCTTGTGTTGCTGCTTCTCTTAGGATAGAATATGTCTACTAGTGAGTGATGCGAGGAGTTGGATTTATTCTGTGAAGGGAATTAGTTTTTGTCGACTTCCCTTCACTCTTATTTGCTCTTGGATTGCGCTCTTTATGCCCCGCTGTGAGATGCCACATCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGGTGTGAAAACCTCTCCCTAGAAGACGTGTTTTAAAAAGCTTGAAGGGAAGCCTGAAAGGAAAAACCCAAAGATGACAATATCTGCTAGTGGCGGGCTTGGGCTATTACAAATGGTATCAGAGCCAGACATTAAGCAGTGTGTCAGTGAAAACGCTGGCCCCCGAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGAGAGAGGAACAAGTGCTAGCAAGGACGCTGGGTTCCGAAGGAGGTGAACTGTGAGATCCTATATCAATTGGAGAGGGGAACGAGTGCCAGCGAGGATGCTGGGCCTTGAAGGGGGTGGATTGCGAGATCCCACATTGATTGCGGAGGGCAACGAAACATTATTTATAAGGGTGTGAAAATCTCTCCCTAACCGACGCATTTTAAAAACCTTGAGGCAAAGAGGACAATATCTACTAGTGGTGGGTTTGGGCTGTTACACCCCTCTTTGCACGCACTTTATTTATGATATCTTTGAATGCACTTTATTTCTGATATGATATTTGTCCATCTTCAGAATGTTTATGGTGATGGTACCTGTTGGTAACTTGTCTGGTTCTGATCTTTTAACATAGTTACTTGTGATCTCCCTGAGTTGCTGTTTTTTCTTCATAGCTTTTATGATAATGGCTTTTGTCTCCAACCAAAAAAAAAATTAATTTCTACATCTTTGTTTTTGAATCGACGGGCTTTCTGATGTTATCTCAGCTCCTATCATGTGGCAAGTAGAATTAACCTGTTTCTACACTTATGTTTTGGATAGACAGTCTTTTCACTGAATTTTCACTTGTATTTCATGCCTAATGTAAGATCCTACGTTGGTTGGAGAAGGGAACGAATCATTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGAGTTTTAAAACCTTGAGGGGAAGTCCTTAAAGGGAAAGCTCAAAGAAGATAATATCTGCTTGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGTTAGACACCGGGCGGTTGCCAGCGAGGACGCTGGCCCCGAGGGGTGGATTGTAAGATCCTACATCGGTTGGAGAGGGAAACGAAACATTTCTTATAAGAATGTGAAAACCTTTTCCTAGTAGACGTGTTTTAAAACCTTGAGGGGAAGCCTTTGAAGAGAAAGTCCAAAAAGGACAATATTTGCTAGCGGTGAGCTTGGGTTGTTATACCCAATTTTTTTTTTTTAAAGAATCATGTTAAATTATTTGTTCTTGTTTTAACAACTTGCCTTTTTCTGTTCATATCATCAACTAAATGCTTTGATTCACATTTAAAAAAAAATTGCCCCCTCCTGAGAAGTTCATAGATTATCGATCAACTATTTTGGATGGAGGTGAAGTGGTTAATTATTCATAAAATTGAGACCACAAGCTTTGGAAACATGAAACGCAGGATATTTTTCATCTAAATCTACTGCCAACCAACTCAATACTGCCAGTGAAAAACCCTTAACAATAATAACTAATGAATGTCATCGGGATATTTAGGAGCATATTAGTCATCAGGTTAGGAATTTATAGGTGGGAGATGGTTATAAGTAAGGTGAGATTGGATAGAGGGGATGAAGAAAAGCTGTGGTTTGTTTATTTGTGTAACAGCTCAAGCTCACCGCTAGCAGATATTGTCCTCCTCTTTGGGCTTTCTCTCGAGGGTTTTGAAACGTGTTTACTAGGTAGAGGTTTCCACATCCTTATAAAGAATGCTTCGTTATCCTCCCCAACCGATGTGGGATCTCACAATTTGAGTCTAGAGGGAGGTGTCCAAGTTCCCCGAGTTACCTAGGATATTGCATTCTACTTTTCTCTTCAAGTTTTTACTGCAATTTCAATTATTTGGTTCTTGTGGGAGTTGTTAGATCTTTGCAACAAACGTGGATCGTTGGACAGTTTTGTTGGAATTATACGAAATACCGAAAGGAAGAAACGACTTCAGTTAAATTAAACCCATTTGAGGGGATAAAATTAAAACCCTGATGTTTCCTATAAAATAAAAATGTACTTTTACTGAGTTTTCTTTGCCCCTGGTGTTCTGATGATTAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGGTAGCTTAATGCACAACTTTTTTAAAGAACATTATTCTGGTTTTTCCTTCTTCCTTAGAACCGTGCATGCTTTTATATTTTGTGGTGGTAGGTTGCAGCAGAGTGATTGGATCCATGTCCTTCAACAAGGGGCAGGCCGGACTATCCCTTGAGTTTTAAGTCTATTTGCTAAACTTCTGTCATAGTTCATAATCTGACCAATTCCTTTTCAGTTCAGTTGTATCCTGGAATGTTTAGATTGCTAATGGGTCTTCGTCTCTCTGTTGCATACTATGGCATGGGTCTTCGTAAATGCATATAAATAGTTTTGGGTCCTATGTTGTACAATAAGAATCAATATTATGACCTTGGTTCTGTTGCATTTGGTGCATAGGCATTTAAGTAAATCCTTGAGGTTTTAAGAAATGGTTTGGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGATGCATTTTGGAAGTCATAAGGTTTTAAGAAATGGTTTAGTTCGTTTCGATCTTACCTCGGAGATTCCGAAATATGGTACATTGGTTTAGAGGCTGCATTTTGGAAGTCATAAAGAAGGATATAACTTCTTGATGTCTGTCTATAATCGACTATCTAATCAAAATACTATGATCTAGATGTGAACCTTAATGCTAGAGTGCTTTTTCCATACTGAGGTTCACTTCTCAAGTGCTTAATTATGTGAGATCCTATATCGGTTGGAGAAGGGAACGAAACATTTCTTATAAAAGTGTCGAAACCTCTCCCTAACAGACGCAGTTTAAAACCGTGAAGCTAGCGACGATATGTAATGGGTTAAAATGGACAACATCTGCTAGCGGTGTGCGTGGACTGTTACAAATGGTTTTAGAGCTAGACACTAGGCGGGGTGCCAGCGAGGACACTGGCCTCTAGGAGTGGATTGTGAGATCTTGCATCAGATGGAGAGGCGAACAAAACATTCCTTATACGGGTGCGGAAAACTCTCCTTAACAGACGCGTTTTAAAACTGTGAAACTGGCAGTGATACGTACAAATGCCCTCTGGGTTATAAAGATGTTCGTTTTTCTCTACTCACTCATGGATGCTTGATGCCAATCAAATGGCAAGATCAAAAGCGCTTGCTTCTCGTTCTAAAGTTCTTTTTCAGTGCACTTTACCGGATCATTGTTTAACGTAGGGCCTTCTGTGATAATTATTAGGGTAGATAGTTGGCTGATGATGCAGTTTGATTGTTGTATGCTCGTTCTATCTCTTTAATGTTGTAGCTAAGATAGATAGTTATCGTTTAGGGGCAAATCTGTGATAATTATTATCAAGTGAATTCGGGATAGTTATCAATCTTTCTTATTTTTCATACAAGTTTCCCACTTTTGATGGATTCTGTTTTCTTTGAATGAAATAGTTTTAAATCTTGATACAAAAAGTTTCGAGAATAGTTCAATTTACGATGCTCACCGAGTCCAAGTTTACATTAATTGATCTAGGATCAAGATAGCATGAATTTATTAATTTTTTTTTATCCATATTTGTTTTTAGAAGTATTTTTTATTTTTGATTTTTTTTAAATAATGGTATTTTTAAGAATTTAGGAATATTTTTATTAGTTTTATCTCAAAATTATAACTTAAAAATACTCGAAATAAAATTAAAGAAAAAAAAAAAAAACATTTAGAATCCTGTAAGCAAATGAGAGCCACGAATGGATGGAATTTCTTATCCACAATTCCTCATCTTCGGTTATCCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA CGGGGTTTGATTTGGGCAGCTGTTTTCCGTTCGCGTTATTTGAAGAACTCGGCGGAATCCTCGATTTCCTGCAATTCGATCGATCTTCATCGTCGTCCTCGCCTGAGACGATATCAGAGCTCAAGAAGCAACCATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA ATGCCGAAGAAGATGGGCGTAAACAGCAAAGCCGAGGCGGCGAGAGCACGTAAGAACTCCGCTGAGACCGAGCGCAAGGAGCGGGAGACTCGGGAGAAGGCGGATCAGTACTGGCGTGAAGCTGAGGGTCCCAAGTCTCGTGCCGCCAAGAAGCGAGAGGATGAATCTGAGAAGCGTGCTGAGGCCGCTGCTCGTAAGGCGGAGGCACGCCGCTTGGCCGAACAGGAGGAGAAGGAATTGGAGAAAGCCATGAAGAAGCCTGACAAGAAGGCGAATAGGGTTTCGATTCCGGTCCCCAAGGTGACCGAAGTTCAATTGAGGAAGAATAAAGAGGTGGAGCAAGCGGAGCTTCAGAGGAAGGCCGAGGAGGCTAAGAAAAAGCTGAACCGGACGGCGGAGGAGGAGGAGTATGAGAGGATGGTGCTGGTGAGCAATACTAATCGGGACGATTCTATTATTGAAGCCAGGACGGTAGAAGACGCGATTTCTCAGATATCTGTTGCGGATAATTTACCCGTGGATAGGCATCCAGAGCGACGGCTCAAGGCCTCATTTAAGGCTTTTGAAGAAGCTGAGCTCCCCAGGCTGAAGGAAGAGAAACCTGGTCTTACTCACAATCAGTACAAGGACATGATATGGAAGCTATGGAAGAAGTCTCCTGACAACCCTCTTAATCAGTCCCCACCTCCACAAAACGACACCGTTCCCTCTTTGCAACCCTCTCTTCCTCTTCCTTCACAACCACATTCCGCCATCAGCTCCGCCACTGCTTTCTCTCCCGCCATGGACGCCGTCTTCGTCAACCAGTCACTCTCCAGCCTCAAACTTCCCCCAAAACCCCCTCTCCCTAAACTCCCCTCTCCAATTCTCCATCTCCATCTCCGCCGCACCTTCAAATCTTTCACCGCCTACGCTGTCAACGAGCCCCTCACTCAACAGACCCAGCAACCAGATAACTTCCCGGAAGACGACGAATCCTACGGCGAGGTCGACGGAATCATCGGCAGCCGCTCCCTGGCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCGTCGTGGGTCCCTTCCGATTTCATCGCTAAAGATGTCGTCGCTGAGTACGAAACCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAATCCGCCCTCAAGTCACTTATCGACGCCGCTGACAGCCGCGATTTCAACGCTGTGGACGAAGACGGCAGAACCGCACTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCTTGCGTTAGAATTTTAGCTGAGGCCGGTGCGGATCTCGACCACCGCGACAAGAGCGGCGGGTTCACTGCTCTGCATATGGCCGCCGGCTACGTAAAACCCGGCACGGTGGAGCTATTACTGGAATTGGGAGCAGATCCGGAGGTGCAAGACGACAAGGGTCGGACACCATTAGTGCTGGCAAGGGAGATTGTGAAAGCGACGCCGAGGGTTCAATTTGCAAGGAGGTTGGGGCTGGAGAGAGTGATCGGAGCGCTGGAGAGAGTGGTTTTCGAGTTCGCGGAGGTGGAGGAGTTGCTGGAGAAGAGGGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGCGAAGATAATGAATGGGTGAAAGCGGCGCTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCCGGATTGGAGTACGCGGTGGCGGAAGCGGTGGTCGGAAAGAGACTTGGGGACGACGGGAAGATGGAGTATCTTGTGAAATGGACGGATATTGAGGATGCCACGTGGGAGCCTGAGGGTAACGTGGATTCGGATTTGATTGCGGAGTTTGAAACCGGTCAGAAGTCTGTTGGGCCTGGGCCCAGTTCGGATCTTGAGGCCCAGTCCAGTAATGGCGGCCCATGA MPKKMGVNSKAEAARARKNSAETERKERETREKADQYWREAEGPKSRAAKKREDESEKRAEAAARKAEARRLAEQEEKELEKAMKKPDKKANRVSIPVPKVTEVQLRKNKEVEQAELQRKAEEAKKKLNRTAEEEEYERMVLVSNTNRDDSIIEARTVEDAISQISVADNLPVDRHPERRLKASFKAFEEAELPRLKEEKPGLTHNQYKDMIWKLWKKSPDNPLNQSPPPQNDTVPSLQPSLPLPSQPHSAISSATAFSPAMDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAVNEPLTQQTQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKSVGPGPSSDLEAQSSNGGP
BLAST of CmaCh11G013550.1 vs. Swiss-Prot
Match: SR43C_ARATH (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2) HSP 1 Score: 409.1 bits (1050), Expect = 9.0e-113 Identity = 220/369 (59.62%), Postives = 271/369 (73.44%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. Swiss-Prot
Match: SR43C_ORYSJ (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 3.8e-95 Identity = 194/378 (51.32%), Postives = 249/378 (65.87%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. Swiss-Prot
Match: CC124_BOVIN (Coiled-coil domain-containing protein 124 OS=Bos taurus GN=CCDC124 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.3e-23 Identity = 92/235 (39.15%), Postives = 140/235 (59.57%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. Swiss-Prot
Match: CC124_MOUSE (Coiled-coil domain-containing protein 124 OS=Mus musculus GN=Ccdc124 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-22 Identity = 92/233 (39.48%), Postives = 135/233 (57.94%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. Swiss-Prot
Match: CC124_HUMAN (Coiled-coil domain-containing protein 124 OS=Homo sapiens GN=CCDC124 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.9e-22 Identity = 90/235 (38.30%), Postives = 139/235 (59.15%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TrEMBL
Match: A0A0A0K634_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 6.2e-161 Identity = 291/354 (82.20%), Postives = 318/354 (89.83%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TrEMBL
Match: B9HR05_POPTR (Chaos family protein OS=Populus trichocarpa GN=POPTR_0009s14260g PE=4 SV=2) HSP 1 Score: 482.3 bits (1240), Expect = 9.3e-133 Identity = 257/385 (66.75%), Postives = 300/385 (77.92%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TrEMBL
Match: V4SA78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028628mg PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 8.7e-131 Identity = 243/361 (67.31%), Postives = 283/361 (78.39%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TrEMBL
Match: A0A067FLG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016433mg PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 8.7e-131 Identity = 243/361 (67.31%), Postives = 283/361 (78.39%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TrEMBL
Match: B9RF69_RICCO (Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 1.5e-130 Identity = 240/358 (67.04%), Postives = 283/358 (79.05%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TAIR10
Match: AT2G47450.1 (AT2G47450.1 chloroplast signal recognition particle component (CAO)) HSP 1 Score: 409.1 bits (1050), Expect = 5.1e-114 Identity = 220/369 (59.62%), Postives = 271/369 (73.44%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TAIR10
Match: AT1G16210.1 (AT1G16210.1 unknown protein) HSP 1 Score: 313.5 bits (802), Expect = 2.9e-85 Identity = 166/227 (73.13%), Postives = 206/227 (90.75%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TAIR10
Match: AT4G35450.5 (AT4G35450.5 ankyrin repeat-containing protein 2) HSP 1 Score: 63.9 bits (154), Expect = 4.0e-10 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TAIR10
Match: AT2G17390.1 (AT2G17390.1 ankyrin repeat-containing 2B) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein) HSP 1 Score: 57.0 bits (136), Expect = 4.9e-08 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: gi|449472373|ref|XP_004153574.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 575.9 bits (1483), Expect = 8.9e-161 Identity = 291/354 (82.20%), Postives = 318/354 (89.83%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: gi|659094128|ref|XP_008447900.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 574.3 bits (1479), Expect = 2.6e-160 Identity = 290/357 (81.23%), Postives = 320/357 (89.64%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: gi|659094126|ref|XP_008447899.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 574.3 bits (1479), Expect = 2.6e-160 Identity = 290/357 (81.23%), Postives = 320/357 (89.64%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: gi|1009150816|ref|XP_015893225.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 486.1 bits (1250), Expect = 9.3e-134 Identity = 257/382 (67.28%), Postives = 294/382 (76.96%), Query Frame = 1
BLAST of CmaCh11G013550.1 vs. NCBI nr
Match: gi|1009150731|ref|XP_015893177.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isoform X2 [Ziziphus jujuba]) HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133 Identity = 257/382 (67.28%), Postives = 294/382 (76.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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