CmaCh11G010690.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCCTACAAAATTCCCCACCATGACCGACAAAACTCACCGAACCGTAAATGAACAGACGGCGTTGTTAGCATCTACATTTGCATTTCCCGAAGAAATCCTCTCGATCACGTCGCGAATCATTCAAAATGACGACTCAGTCTCTTTTCTTCTGTTTAACTTTCCCTAATTCGTCTCTCCGCAGCGTCAATCTACTTCTGTTCGACGTTGGTTTCATTTCAGACATCATTCCTCGAGAATTCTGCGAAAATCAAGCATATTTGTTCTGATTCCGTCTGGATTTTCAGCGAAATGGAGATCGGAATTGTTTGGCTTCTCAGAGCTGCTTGGATTGCAGGAATATTGCCTATACTTCTAGCTCTCTTACCTTTCTCCAGACTGAGTTGGTATCGTCGAACTATATTGGAGTTTGCGAAGAGAGGGAAGATCTTGCAATCTTCTACTAAGGTAAGTGGTCGAATTGTCAATTGTCGATGTACTCGATTGTTTATGTTCCCCCAGCCTCTCTGGTTAGAATGTATGTTTGGTGCTAAATTTTACCTGGACAGTTAAAACTTAATCGGGCTCCCCAAAGTTTTATTTGTCATTAATGTTGGATTTTGATTCTAACAAGTTTGCTGTTAACCATCATTGGCCTAACAGTTATAAGGATCATGAGAATCATAAAAGCTTGGAGGGAATTGATTTAATCGACTTGTTTCTTAGTAACCAAATGTAGAGGGGTCAGATACTTGTATCATGAACTTGGTCAAAATGTGCACGAACTGTCTGAACACTCGCAATTAAAAAAAATGAGTCTGTTGTTAATACTGCTATTTGAATATAGAGTTTACATACTGATTAGATTAATGAGATTCGAGCGTGGTAGTGAGTGGTACAAGGTAATTGGTCAATTAGATAAGATTAGGGAGGGTATACCAAAAATTTGTTGAACTATTATTTTGCCACCGACGTGAGCATAACTCAACTAGTTAAGGTATATATCATTGATTAAGACTTCAAAGGTTCTAACTTCACTCCCACATGTCGTTGAACATAAAAAAAAAAGTACTATTAATTTGCTTTAAGCGACTTCCTTTATACCATCCATCGTTATATCAGTTTAGATCATTATTTGTGAGTATTTGACATTAATATTTTAGAACCAAAATTGAAAATTCAAGGCATAAGTACATAGATATTATTAACACAACCGTTTAAGCTGTGGAATTAAACCTATATTTTAATAGTTCTGAAATTCTATGCTCTTGTTCACCCATATTCTTCAAATTCAGAAATTCACCGTACCTCAGAAATTCTTCTGCCACTTCTATGTGTGGGCTGTTATCTGGACAGCATTATTGCTAGGAACAACTTGGATGTATGCATATGTATCAACCCCGTTAATCTCAGAGCCATTTAACTTTCCTGCCATTACCAGCCAGTTGACTGGAGGTTCAAGTCTATTTTCATGGCAAAAATCTCATTCATCTCGGAGGGAGCACAGATTCCTGGTGTGGAAAGCTGTTTTTCTGCTTTTATTAATGGAAGTCCAAGTTTTGAGACGTCTTTATGAAACGATATACACTTTCAACTATAGCCCCTCGGCTCGGATGCATTTCTTTGGATATTTAACTGGCTTGTTGTAAGTAGCTCTCTTTATTAGGTTTTGTTGCAATACATATCCGCTGATTCTACTATGGCTAGTTTTGGTATTTTGGGCGCTGCTTTAATATGCCGTGGAATGACCGAATACTAGAACTAAGATAGAAAATCTAGGCGTTTCATCATGTAAGCCATGTGTATTACACTTGTCCTACAAAAATTGCATTCTACATCCAAAATAGCCGGATATGAATTTGTTTTCTGTTTGCATCTTAGGATGGGAAATAGGTTTTGGATCAATTTGAATTTTCTTTAATTTTTACTTATTTGGCTTTTTATATCAATCATATGTAAGAATGTGGTAGGCTGCATTCTTTTGATGGGCTCTAAAACTTTTCATACATATGCTAGATTTTTGTTGTTATTTGTTATGTTTTAATCCTTACATCTAGAGGTTTGGTATGTTGATTTCTAATATTTTCTATGGTTAGTTTCTACACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTACGGAAGTGTATCATTTTGCTGCAAATGGGATAGCTCAGTTCATTGTTAAAGGCAAAGGGCAAATGCTAGATGTTGAAGTTAGTCTGTTGGATGCTGTGATTCCTCTAGCAAATTTAGGGTGGCGTCAGTGGATTGGTGCAGCTTTATTCTTTTGGGGTTGGATTCATCAGTGTCATTGTCATCAGATTCTGGTACAGTACACCTCTTCAATACAAAATTGTTTATTCACATATCAGATTTATGATCTTGATGATGTAGTTCAAATCTGCCTTCATTTCACGTTGCTCTCTTTCATCATTGGCAGAATCTTCAACAATGAAAAATGTTTGGTATTGAAAGAGAACACAGCTTTTAGATCTTGAAGGCGATAAAAAAATTTCTCATCAGACAAAGATTGAAAAATACAACGATTGAAAAACTGATTTGAGTTTGAAGGTTTTATTTATGGAACCATTTTTCCGTTGGAATCAAAAGATTTTCTTGATTGGGTATTATGCGTGAACTTTCTTTATGAATGCCACCATACATTTAAACTCACATCCTAGCTTCATTTGACTGATACATATCAAGTTAATTTGTTTAGGCCTCGCTGCGGATACCTGGAGAACAAGGTGAAGAGTATAAAATTCCTCATGGTGATTGGTTCGAAATCGTGTCTTCTCCACACTATCTTGCTGAGATCGTAAGTTTCTCCCTCATGAACTTAAGTATGTCACTAAATCTTAGCTATTACTGATCGGTTTTGTCTCTTGTCCTTTCCCTTTTAAAGGTTATATATGGTGGACTTGTGGTCGCTAGTGGGGGAGAAGACTTAACAATCTGGCTAATTTTTGGATTTGTGGTGAGATTTTTATTTTTTCTGAGAATTAAAATGCAGTTTGATCTTTTCTTCTGTTTGTTCATATTTACCAACCATACTTCTATACTTGGAACTGAAGATGGAGAAGGTAATAATCTTCTGTTGGGTGTTTGCAGGTGGTAAATCTGGCCTTAGCTGCAGCGGAAACTCATAGATGGTATGTTCGTAAATTTGATAATTATCCGAGAAATCGGTTTGCTATTATACCATATATATACTAAGCTATTGTGATGTTCTCAAGTCTGTCTTAATTAGTTAGGTTGCTTGTTTTTAATCCCTCAAGGTAATTTTAATCATGTGTAAAAAATTTCTGCACTGCACTGCACTGCACTGGAGTTGTAGTCCATATATTTGGTGGCCTGAATGCTCGTTCAATGATTAATTAGGCTGATTATGGAAACAGAAAAATTTAATAAAATTGCGACCAGTTTAGAA TTCCCTACAAAATTCCCCACCATGACCGACAAAACTCACCGAACCGTAAATGAACAGACGGCGTTGTTAGCATCTACATTTGCATTTCCCGAAGAAATCCTCTCGATCACGTCGCGAATCATTCAAAATGACGACTCAGTCTCTTTTCTTCTGTTTAACTTTCCCTAATTCGTCTCTCCGCAGCGTCAATCTACTTCTGTTCGACGTTGGTTTCATTTCAGACATCATTCCTCGAGAATTCTGCGAAAATCAAGCATATTTGTTCTGATTCCGTCTGGATTTTCAGCGAAATGGAGATCGGAATTGTTTGGCTTCTCAGAGCTGCTTGGATTGCAGGAATATTGCCTATACTTCTAGCTCTCTTACCTTTCTCCAGACTGAGTTGGTATCGTCGAACTATATTGGAGTTTGCGAAGAGAGGGAAGATCTTGCAATCTTCTACTAAGAAATTCACCGTACCTCAGAAATTCTTCTGCCACTTCTATGTGTGGGCTGTTATCTGGACAGCATTATTGCTAGGAACAACTTGGATGTATGCATATGTATCAACCCCGTTAATCTCAGAGCCATTTAACTTTCCTGCCATTACCAGCCAGTTGACTGGAGGTTCAAGTCTATTTTCATGGCAAAAATCTCATTCATCTCGGAGGGAGCACAGATTCCTGGTGTGGAAAGCTGTTTTTCTGCTTTTATTAATGGAAGTCCAAGTTTTGAGACGTCTTTATGAAACGATATACACTTTCAACTATAGCCCCTCGGCTCGGATGCATTTCTTTGGATATTTAACTGGCTTGTTTTTCTACACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTACGGAAGTGTATCATTTTGCTGCAAATGGGATAGCTCAGTTCATTGTTAAAGGCAAAGGGCAAATGCTAGATGTTGAAGTTAGTCTGTTGGATGCTGTGATTCCTCTAGCAAATTTAGGGTGGCGTCAGTGGATTGGTGCAGCTTTATTCTTTTGGGGTTGGATTCATCAGTGTCATTGTCATCAGATTCTGGCCTCGCTGCGGATACCTGGAGAACAAGGTGAAGAGTATAAAATTCCTCATGGTGATTGGTTCGAAATCGTGTCTTCTCCACACTATCTTGCTGAGATCGTAAGTTTCTCCCTCATGAACTTAAGTGGTAAATCTGGCCTTAGCTGCAGCGGAAACTCATAGATGGTATGTTCGTAAATTTGATAATTATCCGAGAAATCGGTTTGCTATTATACCATATATATACTAAGCTATTGTGATGTTCTCAAGTCTGTCTTAATTAGTTAGGTTGCTTGTTTTTAATCCCTCAAGGTAATTTTAATCATGTGTAAAAAATTTCTGCACTGCACTGCACTGCACTGGAGTTGTAGTCCATATATTTGGTGGCCTGAATGCTCGTTCAATGATTAATTAGGCTGATTATGGAAACAGAAAAATTTAATAAAATTGCGACCAGTTTAGAA ATGGAGATCGGAATTGTTTGGCTTCTCAGAGCTGCTTGGATTGCAGGAATATTGCCTATACTTCTAGCTCTCTTACCTTTCTCCAGACTGAGTTGGTATCGTCGAACTATATTGGAGTTTGCGAAGAGAGGGAAGATCTTGCAATCTTCTACTAAGAAATTCACCGTACCTCAGAAATTCTTCTGCCACTTCTATGTGTGGGCTGTTATCTGGACAGCATTATTGCTAGGAACAACTTGGATGTATGCATATGTATCAACCCCGTTAATCTCAGAGCCATTTAACTTTCCTGCCATTACCAGCCAGTTGACTGGAGGTTCAAGTCTATTTTCATGGCAAAAATCTCATTCATCTCGGAGGGAGCACAGATTCCTGGTGTGGAAAGCTGTTTTTCTGCTTTTATTAATGGAAGTCCAAGTTTTGAGACGTCTTTATGAAACGATATACACTTTCAACTATAGCCCCTCGGCTCGGATGCATTTCTTTGGATATTTAACTGGCTTGTTTTTCTACACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTACGGAAGTGTATCATTTTGCTGCAAATGGGATAGCTCAGTTCATTGTTAAAGGCAAAGGGCAAATGCTAGATGTTGAAGTTAGTCTGTTGGATGCTGTGATTCCTCTAGCAAATTTAGGGTGGCGTCAGTGGATTGGTGCAGCTTTATTCTTTTGGGGTTGGATTCATCAGTGTCATTGTCATCAGATTCTGGCCTCGCTGCGGATACCTGGAGAACAAGGTGAAGAGTATAAAATTCCTCATGGTGATTGGTTCGAAATCGTGTCTTCTCCACACTATCTTGCTGAGATCGTAAGTTTCTCCCTCATGAACTTAAGTGGTAAATCTGGCCTTAGCTGCAGCGGAAACTCATAG MEIGIVWLLRAAWIAGILPILLALLPFSRLSWYRRTILEFAKRGKILQSSTKKFTVPQKFFCHFYVWAVIWTALLLGTTWMYAYVSTPLISEPFNFPAITSQLTGGSSLFSWQKSHSSRREHRFLVWKAVFLLLLMEVQVLRRLYETIYTFNYSPSARMHFFGYLTGLFFYTAAPLSLCSNCITEVYHFAANGIAQFIVKGKGQMLDVEVSLLDAVIPLANLGWRQWIGAALFFWGWIHQCHCHQILASLRIPGEQGEEYKIPHGDWFEIVSSPHYLAEIVSFSLMNLSGKSGLSCSGNS
BLAST of CmaCh11G010690.1 vs. Swiss-Prot
Match: POED2_ARATH (Polyprenol reductase 2 OS=Arabidopsis thaliana GN=At2g16530 PE=1 SV=2) HSP 1 Score: 322.0 bits (824), Expect = 6.9e-87 Identity = 166/300 (55.33%), Postives = 204/300 (68.00%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. Swiss-Prot
Match: POED1_ARATH (Polyprenol reductase 1 OS=Arabidopsis thaliana GN=At1g72590 PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.5e-75 Identity = 155/300 (51.67%), Postives = 195/300 (65.00%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. Swiss-Prot
Match: POED1_ORYSI (Polyprenol reductase 1 OS=Oryza sativa subsp. indica GN=OsI_17065 PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 2.0e-70 Identity = 147/298 (49.33%), Postives = 190/298 (63.76%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. Swiss-Prot
Match: POED1_ORYSJ (Polyprenol reductase 1 OS=Oryza sativa subsp. japonica GN=Os04g0576800 PE=2 SV=2) HSP 1 Score: 267.3 bits (682), Expect = 2.0e-70 Identity = 147/298 (49.33%), Postives = 190/298 (63.76%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. Swiss-Prot
Match: POED2_ORYSJ (Polyprenol reductase 2 OS=Oryza sativa subsp. japonica GN=Os07g0493400 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.3e-64 Identity = 144/298 (48.32%), Postives = 183/298 (61.41%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TrEMBL
Match: A0A0A0K5R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G007840 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 2.5e-136 Identity = 238/283 (84.10%), Postives = 256/283 (90.46%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TrEMBL
Match: W9QZK5_9ROSA (Putative polyprenol reductase 2 OS=Morus notabilis GN=L484_012255 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103 Identity = 188/296 (63.51%), Postives = 229/296 (77.36%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TrEMBL
Match: M5VL53_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008399mg PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.8e-100 Identity = 186/284 (65.49%), Postives = 219/284 (77.11%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TrEMBL
Match: V4S8H8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028796mg PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.5e-96 Identity = 184/296 (62.16%), Postives = 220/296 (74.32%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TrEMBL
Match: A0A0V0HW48_SOLCH (Putative polyprenol reductase 2-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 3.3e-96 Identity = 175/284 (61.62%), Postives = 217/284 (76.41%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TAIR10
Match: AT2G16530.1 (AT2G16530.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 322.0 bits (824), Expect = 3.9e-88 Identity = 166/300 (55.33%), Postives = 204/300 (68.00%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. TAIR10
Match: AT1G72590.1 (AT1G72590.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein) HSP 1 Score: 283.1 bits (723), Expect = 2.0e-76 Identity = 155/300 (51.67%), Postives = 195/300 (65.00%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. NCBI nr
Match: gi|449461631|ref|XP_004148545.1| (PREDICTED: polyprenol reductase 2-like [Cucumis sativus]) HSP 1 Score: 493.0 bits (1268), Expect = 3.6e-136 Identity = 238/283 (84.10%), Postives = 256/283 (90.46%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. NCBI nr
Match: gi|659068526|ref|XP_008444886.1| (PREDICTED: polyprenol reductase 2 [Cucumis melo]) HSP 1 Score: 489.2 bits (1258), Expect = 5.2e-135 Identity = 238/296 (80.41%), Postives = 262/296 (88.51%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. NCBI nr
Match: gi|703095948|ref|XP_010095682.1| (putative polyprenol reductase 2 [Morus notabilis]) HSP 1 Score: 383.6 bits (984), Expect = 3.1e-103 Identity = 188/296 (63.51%), Postives = 229/296 (77.36%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. NCBI nr
Match: gi|1009149085|ref|XP_015892290.1| (PREDICTED: polyprenol reductase 2 [Ziziphus jujuba]) HSP 1 Score: 376.3 bits (965), Expect = 4.9e-101 Identity = 183/284 (64.44%), Postives = 218/284 (76.76%), Query Frame = 1
BLAST of CmaCh11G010690.1 vs. NCBI nr
Match: gi|702436929|ref|XP_010070204.1| (PREDICTED: polyprenol reductase 2-like [Eucalyptus grandis]) HSP 1 Score: 374.4 bits (960), Expect = 1.9e-100 Identity = 185/296 (62.50%), Postives = 223/296 (75.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
|