CmaCh11G009790.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G009790.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Auxin-responsive protein
Location	Cma_Chr11 : 5211213 .. 5214691 (+)
Sequence length	1109

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATGTCCCAATACAAAGGCACTTATAATTAAAATTAAAAATAAATAAACAAATAAATAAATAAATAAAATTCCCTCATATATTATTTATAATATTATTTTCTCCTCATCCTCCATACCCACTTCTTTTCCCTGAACACACAGAGAGAGTGAAAATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACTCAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCTCAAAACGACGGACGCGAATGCCGTTTCCAGCTCCGTCGGTACAGATCGTCCCAAGCCTCCACCGCCCAAGTATCATTCCTTCTCCTTTTTTATTTTATTTTTTAATTATTTTTAAATAAAACATTAAAAGCTTTTAAAGCTAAAAGGGTTAGTAAAGATAATTTTATGGGGTTTTTTTTAATTTTTAAAAGAAGATGAATTTTAATTAATGCCAATTTCATTACTAATTAAAAATTCATATATATACATATATATATATATATGCATTGATTTTTTTAAATATAATTTATATTTTGTTTTCTTTTGAGAAAAAATGGAGTTAAAAATTAAAATTATAATGATAATGTTTTTGGGCCTTCAATAATTGAGTTGAGAAGAGGAAGAAAGGATGACCAAGTAAACAAAAGGTTATTATTGTGGTTTCGAATTTAAAGGAATTTATTATTATTATTATTTTTATTTTTATTTATTTATTTTGGTTGTCGGGAAAACATAGGAAAACTACAAAACATTTGGAATCTTTTTTTTTTCTTCTTTACATTAAATTACAAATTATTTTTATAATTTTAAAAATAATTACTAATTCTAAGTTTTGAGTTTGTAATTATTCTTTTTTTTAGTATTCTCTTTTATAAAAAAAAAGTGTTTTTCCTAAAAGCATTTTAATTTTCCATAGAGAGTAAATAAGTTAATATACTTTTTAAAAAGCATTTAAATATTTGATTTTTTTGTTTTTATTTTTTATTTTTTAATACTCGAATTTGATTACTCAAAAAATTTGATCAACCCAACTCAACCGTTTGAGTTATGAATTTAATTTCGTTTGTTGAATTTAAATAAATACAAAATTTATAAACTATGTTAGATTTATAGGTTTAAATAAAATTTATTACTAATTTTAAAAAATACAAATAAATGTTTATTAAATATCACTTTTTTATTAAAGACAAAATTTTAAAGAAATGACTAGGTTTATTATTTAATAAGAGTTGTTTGAACTGAAAAAACTTATCAACCGAATAATTAAATCGAATTTAAAATTACCTAAATGACAAGTACACCGTTTTTTAAATTAACCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGCACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGTACCTTCGAGGAGGCTTGACTCCTTTTTCTTTTTGGAGTCCTTTGTTCGACATTCGAGGATTTGCCAATCTATTGGCACGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAACCCAATGTGGAACTTTCATCATCCAATAATACATATTATTTTATCTTCCAAAAAAGTCTTTTGGCATCACCAAAAGCCAATAATTAACTAATTTCGTTTGAGTATAATAATTTGAGATAATGACATGACAATAAAAAGAAAGAATAATTATTATTATTATGATTTAAAAAAAACAATATAAAACCAATTGAAATTAAATACAATTTCCAAAATTATTAACGGTGAGAATTTTATAATATTATTTTTAACAGAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCGAAGAAGAGTACAGAGGAAACCGAGAAAGGCGCCACCGTCAGCGGCGGTTCCGATGCGGCGGTGTTTATTAAAGTCAGTATGGACGGCGCACCGTACTTGCGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACAGGTAAAATTCCAACTTACTTTTCACTTTTACTATCTCGAAATTAGTACAAATGACTCGATAATCTGACTAGCTTGAACTAACCAACTCAAACCACATAAGTTGAGTTCAATTTTTGAAAAATCGAAAACTCAAGTGAGGTTAGTAGATTAACAGTGATCTGATGATCAACTCGAAAATTGAATTAACTCTATTCTACTTTTAAAATTATTGTGGATATATACGTCTCTATTCGGTGTTAATGATGCATTGTAACTTATGAATGAAATGGGTATGATGGGTAAGTATAATTTTTCAATAATTAAAAAGTGAAAAGAACAATTCGACAACCCAACTCGAAAATAAAAGATTGGGTTTGGTTGTAAACTCTATTCGGGTTGCTCGGGTCACCAAATTCGAGTTGGTTCAAAAGATTTTTCCAACCCTTGTACACTCCTACAAAATATCAGGTAATTGTGGGGCACAAAAGATGAAGAATTACACGAACGAAAGCAAATCAATGGATGTACGAAACAAGACTGATTACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAAGTAAGTTTTACTCCGCTTATTTATTTATTTATTTATTTATTTATCTTCTCTAATTCATTATATATATAAAAAAAAATCATTTTTATTGTTTAATTCGACAGTATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGAATTCGAGACCATTGGACTCGGTAAGTTAATAACAAAAATATGCATTATAATAAAATCTACCAATTCTAAAAATTATTTTGTTATTATTATTTTTTTTATTTTAAATTGAATTTAATAAGTTTACAAATATTATTTGATTTATTTATTTATTTATTTATTTTTGTTTACAAATAAAATTATTGGATAATGTAAATTAATATATAGATTGTTAATTTTACAGCCCCAAGAGCATTGGAGAAGTGCAAGACCAGGAACTGAATTACTAATATTAGGATATTATTTTTTTTGAATAATAATAATAATAATAATAATAATCTTTATTATTATTAGGAATTGGTAGTTTGCAAATAATTTCCAAAAATTATAATAATAATAATAATAATAAATGAAACCCTACTCAATAGAGGAAGGAATTTGAATCTTATAGGTAACATATAATTATTATTATTTTTTTTTACGTCCATGTAATTGCTATATAAATGAAATATTTTTCGTGTTTATATATTATATTAATTAGTCTCTACTGAACTCGTC

mRNA sequence

CTAATGTCCCAATACAAAGGCACTTATAATTAAAATTAAAAATAAATAAACAAATAAATAAATAAATAAAATTCCCTCATATATTATTTATAATATTATTTTCTCCTCATCCTCCATACCCACTTCTTTTCCCTGAACACACAGAGAGAGTGAAAATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACTCAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCTCAAAACGACGGACGCGAATGCCGTTTCCAGCTCCGTCGGTACAGATCGTCCCAAGCCTCCACCGCCCAAAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCGAAGAAGAGTACAGAGGAAACCGAGAAAGGCGCCACCGTCAGCGGCGGTTCCGATGCGGCGGTGTTTATTAAAGTCAGTATGGACGGCGCACCGTACTTGCGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACAGGTAATTGTGGGGCACAAAAGATGAAGAATTACACGAACGAAAGCAAATCAATGGATGTACGAAACAAGACTGATTACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGAATTCGAGACCATTGGACTCGCCCCAAGAGCATTGGAGAAGTGCAAGACCAGGAACTGAATTACTAATATTAGGATATTATTTTTTTTGAATAATAATAATAATAATAATAATAATCTTTATTATTATTAGGAATTGGTAGTTTGCAAATAATTTCCAAAAATTATAATAATAATAATAATAATAAATGAAACCCTACTCAATAGAGGAAGGAATTTGAATCTTATAGGTAACATATAATTATTATTATTTTTTTTTACGTCCATGTAATTGCTATATAAATGAAATATTTTTCGTGTTTATATATTATATTAATTAGTCTCTACTGAACTCGTC

Coding sequence (CDS)

ATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACTCAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCTCAAAACGACGGACGCGAATGCCGTTTCCAGCTCCGTCGGTACAGATCGTCCCAAGCCTCCACCGCCCAAAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCGAAGAAGAGTACAGAGGAAACCGAGAAAGGCGCCACCGTCAGCGGCGGTTCCGATGCGGCGGTGTTTATTAAAGTCAGTATGGACGGCGCACCGTACTTGCGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACAGGTAATTGTGGGGCACAAAAGATGAAGAATTACACGAACGAAAGCAAATCAATGGATGTACGAAACAAGACTGATTACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGAATTCGAGACCATTGGACTCGCCCCAAGAGCATTGGAGAAGTGCAAGACCAGGAACTGA

Protein sequence

MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVSSSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN

Homology

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BLAST of CmaCh11G009790.1 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-67
Identity = 140/241 (58.09%), Postives = 176/241 (73.03%), Query Frame = 1


Query: 4   LIDFEQTELRLGLPGGD-----AVK---KRGFTQTLDLKLNLAADSDQRLKTTDANAVSS 63
           +I+FE TELRLGLPGG+     A K   KRGF++T+DLKLNL++ +   +   D   +  
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE 60

Query: 64  SVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKK-----STEETEK-----GATVSGGSD 123
            V       PP KAQVVGWPPV+S R+N+++ +K     +TE  +K     GAT S  + 
Sbjct: 61  KV-----VKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASAC 120

Query: 124 AAV-FIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKS 183
           A V ++KVSMDGAPYLRK+D+K+Y +YQ+LS+ALSKMF+SFT GN G Q MK++ NESK 
Sbjct: 121 ATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKL 180

Query: 184 MDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTR 226
           +D+ N +DYVPTYEDKDGDWMLVGDVPW MFVDSCKR+RIMK  E IGLAPRALEKCK R
Sbjct: 181 IDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNR 236

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BLAST of CmaCh11G009790.1 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-65
Identity = 133/242 (54.96%), Postives = 175/242 (72.31%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPGG-DAVK---------KRGFTQTLDLKLNLAADSDQRLKTTDA 60
           +G L++ + TEL LGLPGG +AV+         KRGF++T+DL LNL ++ +  +   + 
Sbjct: 2   IGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNV 61

Query: 61  NAVSSSVGTDR-PKPPPPKAQVVGWPPVKSLRRNIVAPKKSTE-----ETEKGATVSGGS 120
           +AV     T + P  PP KAQVVGWPPV++ R+N++  +K++       +EK     GG+
Sbjct: 62  SAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGA 121

Query: 121 DAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKS 180
             A  +KVSMDGAPYLRKVD+KMY SYQ+LSDAL+KMF+SFT GN GAQ M ++ NESK 
Sbjct: 122 AGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKL 181

Query: 181 MDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEK-CKT 226
           M++ N ++YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E +GLAPRA+EK CK 
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKN 241

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BLAST of CmaCh11G009790.1 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 5.5e-65
Identity = 129/231 (55.84%), Postives = 162/231 (70.13%), Query Frame = 1


Query: 5   IDFEQTELRLGLPGGDAV----------KKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 64
           ++ ++TEL LGLPGG              KRGF++T+DLKLNL ++    +      A  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 65  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVFIKVSM 124
                  P  PP KAQVVGWPPV++ R+N++A +KS E  E    +S G     F+KVSM
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE---AMSSGGGTVAFVKVSM 120

Query: 125 DGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDYV 184
           DGAPYLRKVD+KMY SY++LSDAL+KMF+SFT G+ GAQ M ++ NESK MD+ N ++YV
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 185 PTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
           P+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E IGLAPRA+EK K R+
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228

[Close]

BLAST of CmaCh11G009790.1 vs. Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-62
Identity = 130/236 (55.08%), Postives = 166/236 (70.34%), Query Frame = 1


Query: 1   MGSL-IDFEQTELRLGLPGGDAV-----KKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGS+ ++  +TEL LGLPGGD V      KRGF++T+DLKLNL  +   +  +T  + V+
Sbjct: 2   MGSVELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVT 61

Query: 61  -----SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVF 120
                 S     P  PP KAQVVGWPPV+S R+N++   + +         SGG +AA F
Sbjct: 62  FDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKS---------SGGPEAAAF 121

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQK-MKNYTNESKSMDVR 180
           +KVSMDGAPYLRK+D++MY SY ELS+ALS MF+SFT G  G ++ M ++ NE K MD+ 
Sbjct: 122 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 181

Query: 181 NKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTR 225
           N  DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MK  + IGLAPRA+EKCK+R
Sbjct: 182 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228

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BLAST of CmaCh11G009790.1 vs. Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-62
Identity = 137/252 (54.37%), Postives = 169/252 (67.06%), Query Frame = 1


Query: 7   FEQTELRLGLPGGDA-----VKKRGFTQT-----------LDLKLNLAADSDQRLKTTDA 66
           FE+TELRLGLPG        ++KRGF++T           +DL LNL++      K    
Sbjct: 3   FEETELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSS------KEAAT 62

Query: 67  NAVSSSVGTDR--------------PKPPPPKAQVVGWPPVKSLRRNIVAPKKST-EETE 126
            A +++  TD+              P  PP K QVVGWPPV+S R+N++A +KS  EE+E
Sbjct: 63  TAAAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESE 122

Query: 127 KGATVSGGSDAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKM 186
           K +     S  A F+KVSMDGAPYLRKVD+KMY SY+ELSD+L KMF+SFT GNC +Q M
Sbjct: 123 KNS-----SPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM 182

Query: 187 KNYTNESKSMDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETI--GL 226
           K++ NESK  D+ N +DYVPTYEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E I  GL
Sbjct: 183 KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGL 242

[Close]

BLAST of CmaCh11G009790.1 vs. TrEMBL
Match: A0A0A0M3H6_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G690240 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.8e-92
Identity = 179/236 (75.85%), Postives = 192/236 (81.36%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPGGD------AVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGSL+ FE+TELRLGLPGGD      AVKKRGFT+T+DLKLN+  DS+Q  KTTD N VS
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKST--EETEKGATVSGGS---DAAVF 120
           S V  D PKPPP KAQVVGWPPVKSLRRNIV P K    EETEK A +SGG     AA F
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVGAAAF 120

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRN 180
           IKVSMDGAPYLRKVD+KMYGSYQELSDAL KMFASFT G CGAQKM++Y NE K +DV N
Sbjct: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVSN 180

Query: 181 KTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
            +DYVPTYEDKDGDWMLVGDVPW+MFVDSCKRLRIMK  E IGLAPRALEKCK RN
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRALEKCKNRN 236

[Close]

BLAST of CmaCh11G009790.1 vs. TrEMBL
Match: I3NNW7_GOSHI (Auxin-responsive protein OS=Gossypium hirsutum GN=Aux7 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.1e-71
Identity = 145/238 (60.92%), Postives = 179/238 (75.21%), Query Frame = 1


Query: 3   SLIDFEQTELRLGLPG-----GDAVK---KRGFTQTLDLKLNLAADSDQRLKTTDANAVS 62
           S I+FE+TELRLGLPG     G+  K   KRGF++T++LKLNL   S +     D++ + 
Sbjct: 13  STINFEETELRLGLPGANGNDGETTKNNGKRGFSETVNLKLNL---SSKETVAEDSDKMK 72

Query: 63  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAV------ 122
               TD P  PP KAQVVGWPPV+S R+NI+A +K++ E E G+  +G S AA+      
Sbjct: 73  EKSSTD-PAKPPAKAQVVGWPPVRSFRKNIMAVQKASSEEEGGSKKAGNSAAAITTTTAA 132

Query: 123 -FIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDV 182
            F+KVSMDGAPYLRKVD+K+Y SYQ+LSDALSKMF+SFT GNCG+  MK++ NESK +D+
Sbjct: 133 AFVKVSMDGAPYLRKVDLKLYKSYQQLSDALSKMFSSFTIGNCGSHGMKDFMNESKLIDL 192

Query: 183 RNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
            N ++YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMK  E IGLAPRA+EKCK R+
Sbjct: 193 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 246

[Close]

BLAST of CmaCh11G009790.1 vs. TrEMBL
Match: A0A0D2W7T9_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_013G200700 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 145/238 (60.92%), Postives = 177/238 (74.37%), Query Frame = 1


Query: 3   SLIDFEQTELRLGLPG-----GDAVK---KRGFTQTLDLKLNLAADSDQRLKTTDANAVS 62
           S I+FE+TELRLGLPG     G+  K   KRGF++T++LKLNL   S +     D+  + 
Sbjct: 13  STINFEETELRLGLPGANGNDGETTKNNGKRGFSETVNLKLNL---SSKETVAEDSEKMK 72

Query: 63  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGS-------DAA 122
               TD P  PP KAQVVGWPPV+S R+NI+A +K++ E E G+  +G S        AA
Sbjct: 73  EKSSTD-PAKPPAKAQVVGWPPVRSFRKNIMAVQKASSEEEGGSKKAGNSAAATTTTTAA 132

Query: 123 VFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDV 182
            F+KVSMDGAPYLRKVD+K+Y SYQ+LSDALSKMF+SFT GNCG+  MK++ NESK +D+
Sbjct: 133 AFVKVSMDGAPYLRKVDLKLYKSYQQLSDALSKMFSSFTIGNCGSHGMKDFMNESKLIDL 192

Query: 183 RNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
            N ++YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMK  E IGLAPRA+EKCK R+
Sbjct: 193 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 246

[Close]

BLAST of CmaCh11G009790.1 vs. TrEMBL
Match: A0A067JIG3_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.1e-70
Identity = 145/241 (60.17%), Postives = 180/241 (74.69%), Query Frame = 1


Query: 5   IDFEQTELRLGLPGG------------DAVKK-----RGFTQTLDLKLNLAA-DSDQRLK 64
           I+FE+TELRLGLPGG            D + K     RGF++T+DLKLNL+  +S +  K
Sbjct: 11  INFEETELRLGLPGGGGGGGGNTTNEGDQIAKINNGKRGFSETVDLKLNLSTKESGKEEK 70

Query: 65  TTDANAVSSSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKST-EETEKGATVSG-GS 124
             +   V SS   + P  PP KAQVVGWPP++S R+N+++ +KS  +E EK AT +  GS
Sbjct: 71  MKEKTDVPSS---NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKAATATAAGS 130

Query: 125 DAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKS 184
            +A F+KVSMDGAPYLRKVD+K+Y SYQELSDAL KMF+SFT GNCG+Q MK++ NESK 
Sbjct: 131 SSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKL 190

Query: 185 MDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTR 226
           +D+ N ++YVPTYEDKDGDWMLVGDVPW MF+DSCKRLRIMK  E IGLAPRA+EKCK R
Sbjct: 191 IDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRAVEKCKNR 248

[Close]

BLAST of CmaCh11G009790.1 vs. TrEMBL
Match: B9SZ69_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.1e-70
Identity = 146/245 (59.59%), Postives = 177/245 (72.24%), Query Frame = 1


Query: 4   LIDFEQTELRLGLPGGDAVK---------KRGFTQTLDLKLNLAADSDQRL------KTT 63
           +I+FE+TELRLGLPGG  V          KRGF++T+DLKLNL+             +T 
Sbjct: 14  MINFEETELRLGLPGGSNVNDSEFAKVNGKRGFSETVDLKLNLSTKEPSGKDVIVGEETM 73

Query: 64  DANAVSSSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKK-STEETEKG-------ATV 123
              A   S   D P  PP KAQVVGWPP++S R+N++A +K ST+E EKG       A  
Sbjct: 74  KEKATVPSSSND-PAKPPAKAQVVGWPPIRSFRKNVMAVQKNSTDEGEKGTATSAPAAAA 133

Query: 124 SGGSDAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTN 183
           + GS +A F+KVSMDGAPYLRKVD+K+Y SYQELSDAL KMF+SFT GNCG+Q MK++ N
Sbjct: 134 TSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMN 193

Query: 184 ESKSMDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEK 226
           ESK +D+ N ++YVPTYEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E IGLAPRA+EK
Sbjct: 194 ESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVNSCKRLRIMKGSEAIGLAPRAVEK 253

[Close]

BLAST of CmaCh11G009790.1 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16)

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-68
Identity = 140/241 (58.09%), Postives = 176/241 (73.03%), Query Frame = 1


Query: 4   LIDFEQTELRLGLPGGD-----AVK---KRGFTQTLDLKLNLAADSDQRLKTTDANAVSS 63
           +I+FE TELRLGLPGG+     A K   KRGF++T+DLKLNL++ +   +   D   +  
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKE 60

Query: 64  SVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKK-----STEETEK-----GATVSGGSD 123
            V       PP KAQVVGWPPV+S R+N+++ +K     +TE  +K     GAT S  + 
Sbjct: 61  KV-----VKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASAC 120

Query: 124 AAV-FIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKS 183
           A V ++KVSMDGAPYLRK+D+K+Y +YQ+LS+ALSKMF+SFT GN G Q MK++ NESK 
Sbjct: 121 ATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKL 180

Query: 184 MDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTR 226
           +D+ N +DYVPTYEDKDGDWMLVGDVPW MFVDSCKR+RIMK  E IGLAPRALEKCK R
Sbjct: 181 IDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNR 236

[Close]

BLAST of CmaCh11G009790.1 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66
Identity = 133/242 (54.96%), Postives = 175/242 (72.31%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPGG-DAVK---------KRGFTQTLDLKLNLAADSDQRLKTTDA 60
           +G L++ + TEL LGLPGG +AV+         KRGF++T+DL LNL ++ +  +   + 
Sbjct: 2   IGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNV 61

Query: 61  NAVSSSVGTDR-PKPPPPKAQVVGWPPVKSLRRNIVAPKKSTE-----ETEKGATVSGGS 120
           +AV     T + P  PP KAQVVGWPPV++ R+N++  +K++       +EK     GG+
Sbjct: 62  SAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGA 121

Query: 121 DAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKS 180
             A  +KVSMDGAPYLRKVD+KMY SYQ+LSDAL+KMF+SFT GN GAQ M ++ NESK 
Sbjct: 122 AGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKL 181

Query: 181 MDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEK-CKT 226
           M++ N ++YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E +GLAPRA+EK CK 
Sbjct: 182 MNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKN 241

[Close]

BLAST of CmaCh11G009790.1 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14)

HSP 1 Score: 248.8 bits (634), Expect = 3.1e-66
Identity = 129/231 (55.84%), Postives = 162/231 (70.13%), Query Frame = 1


Query: 5   IDFEQTELRLGLPGGDAV----------KKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 64
           ++ ++TEL LGLPGG              KRGF++T+DLKLNL ++    +      A  
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 65  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVFIKVSM 124
                  P  PP KAQVVGWPPV++ R+N++A +KS E  E    +S G     F+KVSM
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE---AMSSGGGTVAFVKVSM 120

Query: 125 DGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDYV 184
           DGAPYLRKVD+KMY SY++LSDAL+KMF+SFT G+ GAQ M ++ NESK MD+ N ++YV
Sbjct: 121 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 180

Query: 185 PTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
           P+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK  E IGLAPRA+EK K R+
Sbjct: 181 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228

[Close]

BLAST of CmaCh11G009790.1 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 241.1 bits (614), Expect = 6.5e-64
Identity = 130/236 (55.08%), Postives = 166/236 (70.34%), Query Frame = 1


Query: 1   MGSL-IDFEQTELRLGLPGGDAV-----KKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGS+ ++  +TEL LGLPGGD V      KRGF++T+DLKLNL  +   +  +T  + V+
Sbjct: 2   MGSVELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVT 61

Query: 61  -----SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAVF 120
                 S     P  PP KAQVVGWPPV+S R+N++   + +         SGG +AA F
Sbjct: 62  FDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKS---------SGGPEAAAF 121

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQK-MKNYTNESKSMDVR 180
           +KVSMDGAPYLRK+D++MY SY ELS+ALS MF+SFT G  G ++ M ++ NE K MD+ 
Sbjct: 122 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 181

Query: 181 NKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTR 225
           N  DYVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MK  + IGLAPRA+EKCK+R
Sbjct: 182 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228

[Close]

BLAST of CmaCh11G009790.1 vs. TAIR10
Match: AT4G29080.1 (AT4G29080.1 phytochrome-associated protein 2)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 1


Query: 65  PPPKAQVVGWPPVKSLRRNIVAPKKSTE-----ETEKGATVSGGSDAAVFIKVSMDGAPY 124
           P  KAQVVGWPP++S R+N +A  +S +     ETE+    SG     +++KVSM+GAPY
Sbjct: 138 PASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPY 197

Query: 125 LRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKM--KNYTNESKSMDVRNKTDYVPTY 184
           LRK+D+K Y SY ELS AL KMF+ FT G  G+     ++  NES+  D+   ++YV TY
Sbjct: 198 LRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTY 257

Query: 185 EDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
           EDKD DWMLVGDVPW MF+ SCK+LRIMK  E IGLAPR +EKC++RN
Sbjct: 258 EDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305

[Close]

BLAST of CmaCh11G009790.1 vs. NCBI nr
Match: gi|449449553|ref|XP_004142529.1| (PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 4.1e-92
Identity = 179/236 (75.85%), Postives = 192/236 (81.36%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPGGD------AVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGSL+ FE+TELRLGLPGGD      AVKKRGFT+T+DLKLN+  DS+Q  KTTD N VS
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKST--EETEKGATVSGGS---DAAVF 120
           S V  D PKPPP KAQVVGWPPVKSLRRNIV P K    EETEK A +SGG     AA F
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVGAAAF 120

Query: 121 IKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRN 180
           IKVSMDGAPYLRKVD+KMYGSYQELSDAL KMFASFT G CGAQKM++Y NE K +DV N
Sbjct: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVSN 180

Query: 181 KTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
            +DYVPTYEDKDGDWMLVGDVPW+MFVDSCKRLRIMK  E IGLAPRALEKCK RN
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRALEKCKNRN 236

[Close]

BLAST of CmaCh11G009790.1 vs. NCBI nr
Match: gi|659125485|ref|XP_008462706.1| (PREDICTED: auxin-responsive protein IAA16-like isoform X1 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-88
Identity = 170/232 (73.28%), Postives = 188/232 (81.03%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGSL+DF++TELRLGLPG      GDAVKKRGFT+T+DLKL++A DSDQ  KT D N VS
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKST-EETEKGATVSGGSDAAVFIKVS 120
           S V  D PKPPP K QV+GWPPVKSLRRNI+ PKK+  EET+K A       A  FIKVS
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAVGDCSVGAVAFIKVS 120

Query: 121 MDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDY 180
           M+GAPYLRKVD+KMY SYQ+L DALSKMF SFTTGNCGAQKMK+Y NE K  DV N +DY
Sbjct: 121 MEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLNGSDY 180

Query: 181 VPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
           VPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMK  E IGLAPRALEKCK RN
Sbjct: 181 VPTYEDKDGDWMLVGDVPWDMFVNSCKRLRIMKGSEAIGLAPRALEKCKNRN 232

[Close]

BLAST of CmaCh11G009790.1 vs. NCBI nr
Match: gi|659125487|ref|XP_008462707.1| (PREDICTED: auxin-induced protein AUX28-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 3.6e-72
Identity = 143/200 (71.50%), Postives = 160/200 (80.00%), Query Frame = 1


Query: 1   MGSLIDFEQTELRLGLPG------GDAVKKRGFTQTLDLKLNLAADSDQRLKTTDANAVS 60
           MGSL+DF++TELRLGLPG      GDAVKKRGFT+T+DLKL++A DSDQ  KT D N VS
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKST-EETEKGATVSGGSDAAVFIKVS 120
           S V  D PKPPP K QV+GWPPVKSLRRNI+ PKK+  EET+K A       A  FIKVS
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAVGDCSVGAVAFIKVS 120

Query: 121 MDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDVRNKTDY 180
           M+GAPYLRKVD+KMY SYQ+L DALSKMF SFTTGNCGAQKMK+Y NE K  DV N +DY
Sbjct: 121 MEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLNGSDY 180

Query: 181 VPTYEDKDGDWMLVGDVPWN 194
           VPTYEDKDGDWMLVGDVPW+
Sbjct: 181 VPTYEDKDGDWMLVGDVPWD 200

[Close]

BLAST of CmaCh11G009790.1 vs. NCBI nr
Match: gi|645222671|ref|XP_008218270.1| (PREDICTED: auxin-responsive protein IAA16 [Prunus mume])

HSP 1 Score: 276.6 bits (706), Expect = 4.0e-71
Identity = 152/247 (61.54%), Postives = 182/247 (73.68%), Query Frame = 1


Query: 3   SLIDFEQTELRLGLPGG--------DAVK---KRGFTQTLDLKLNLA---------ADSD 62
           SLI+FE+TELRLGLPGG        +A K   KRGF++T+DLKLN++         AD D
Sbjct: 14  SLINFEETELRLGLPGGIANPGKDGEAAKNNGKRGFSETVDLKLNISSQDQSADRSADQD 73

Query: 63  QRLKTT--DANAVSSSVGTDRP-KPPPPKAQVVGWPPVKSLRRNIVA-PKKSTEETEKGA 122
           Q+L     + NA + +   + P KPP  KAQVVGWPPV+S R+NIV   KKS+EE EKG 
Sbjct: 74  QQLMELKREKNAAAPAPSANDPSKPPASKAQVVGWPPVRSFRKNIVTVQKKSSEEAEKG- 133

Query: 123 TVSGGSDAAVFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNY 182
                + +A F+KVSMDGAPYLRKVD+K+Y SYQELS AL KMF+SFT GNCG+  MK++
Sbjct: 134 ---NSNISAAFVKVSMDGAPYLRKVDLKLYKSYQELSTALGKMFSSFTIGNCGSDGMKDF 193

Query: 183 TNESKSMDVRNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRAL 226
            NESK +D+ N +DYVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMK  E IGLAPRA+
Sbjct: 194 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWGMFVDSCKRLRIMKGSEAIGLAPRAV 253

[Close]

BLAST of CmaCh11G009790.1 vs. NCBI nr
Match: gi|332167939|gb|AEE25654.1| (auxin-responsive protein [Gossypium hirsutum])

HSP 1 Score: 275.4 bits (703), Expect = 8.8e-71
Identity = 145/238 (60.92%), Postives = 179/238 (75.21%), Query Frame = 1


Query: 3   SLIDFEQTELRLGLPG-----GDAVK---KRGFTQTLDLKLNLAADSDQRLKTTDANAVS 62
           S I+FE+TELRLGLPG     G+  K   KRGF++T++LKLNL   S +     D++ + 
Sbjct: 13  STINFEETELRLGLPGANGNDGETTKNNGKRGFSETVNLKLNL---SSKETVAEDSDKMK 72

Query: 63  SSVGTDRPKPPPPKAQVVGWPPVKSLRRNIVAPKKSTEETEKGATVSGGSDAAV------ 122
               TD P  PP KAQVVGWPPV+S R+NI+A +K++ E E G+  +G S AA+      
Sbjct: 73  EKSSTD-PAKPPAKAQVVGWPPVRSFRKNIMAVQKASSEEEGGSKKAGNSAAAITTTTAA 132

Query: 123 -FIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGAQKMKNYTNESKSMDV 182
            F+KVSMDGAPYLRKVD+K+Y SYQ+LSDALSKMF+SFT GNCG+  MK++ NESK +D+
Sbjct: 133 AFVKVSMDGAPYLRKVDLKLYKSYQQLSDALSKMFSSFTIGNCGSHGMKDFMNESKLIDL 192

Query: 183 RNKTDYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKEFETIGLAPRALEKCKTRN 226
            N ++YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMK  E IGLAPRA+EKCK R+
Sbjct: 193 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 246

The following BLAST results are available for this feature:

BLAST of CmaCh11G009790.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IAA16_ARATH	2.0e-67	58.09	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1	[more]
IAA7_ARATH	2.5e-65	54.96	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1	[more]
IAA14_ARATH	5.5e-65	55.84	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2	[more]
IAA17_ARATH	1.2e-62	55.08	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2	[more]
AUX28_SOYBN	2.0e-62	54.37	Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1	[more]

BLAST of CmaCh11G009790.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3H6_CUCSA	2.8e-92	75.85	Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G690240 PE=3 SV=1	[more]
I3NNW7_GOSHI	6.1e-71	60.92	Auxin-responsive protein OS=Gossypium hirsutum GN=Aux7 PE=2 SV=1	[more]
A0A0D2W7T9_GOSRA	1.4e-70	60.92	Auxin-responsive protein OS=Gossypium raimondii GN=B456_013G200700 PE=3 SV=1	[more]
A0A067JIG3_JATCU	3.1e-70	60.17	Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1	[more]
B9SZ69_RICCO	3.1e-70	59.59	Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1	[more]

BLAST of CmaCh11G009790.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04730.1	1.1e-68	58.09	indoleacetic acid-induced protein 16	[more]
AT3G23050.1	1.4e-66	54.96	indole-3-acetic acid 7	[more]
AT4G14550.1	3.1e-66	55.84	indole-3-acetic acid inducible 14	[more]
AT1G04250.1	6.5e-64	55.08	AUX/IAA transcriptional regulator family protein	[more]
AT4G29080.1	1.6e-46	54.76	phytochrome-associated protein 2	[more]

BLAST of CmaCh11G009790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449553\|ref\|XP_004142529.1\|	4.1e-92	75.85	PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus]	[more]
gi\|659125485\|ref\|XP_008462706.1\|	2.7e-88	73.28	PREDICTED: auxin-responsive protein IAA16-like isoform X1 [Cucumis melo]	[more]
gi\|659125487\|ref\|XP_008462707.1\|	3.6e-72	71.50	PREDICTED: auxin-induced protein AUX28-like isoform X2 [Cucumis melo]	[more]
gi\|645222671\|ref\|XP_008218270.1\|	4.0e-71	61.54	PREDICTED: auxin-responsive protein IAA16 [Prunus mume]	[more]
gi\|332167939\|gb\|AEE25654.1\|	8.8e-71	60.92	auxin-responsive protein [Gossypium hirsutum]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G009790	CmaCh11G009790	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G009790.1	CmaCh11G009790.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G009790.1.exon.5	CmaCh11G009790.1.exon.5	exon
CmaCh11G009790.1.exon.4	CmaCh11G009790.1.exon.4	exon
CmaCh11G009790.1.exon.3	CmaCh11G009790.1.exon.3	exon
CmaCh11G009790.1.exon.2	CmaCh11G009790.1.exon.2	exon
CmaCh11G009790.1.exon.1	CmaCh11G009790.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G009790.1.five_prime_UTR.1	CmaCh11G009790.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G009790.1.CDS.1	CmaCh11G009790.1.CDS.1	CDS
CmaCh11G009790.1.CDS.2	CmaCh11G009790.1.CDS.2	CDS
CmaCh11G009790.1.CDS.3	CmaCh11G009790.1.CDS.3	CDS
CmaCh11G009790.1.CDS.4	CmaCh11G009790.1.CDS.4	CDS
CmaCh11G009790.1.CDS.5	CmaCh11G009790.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G009790.1.three_prime_UTR.1	CmaCh11G009790.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	PROFILE	PS51745	PB1	coord: 107..207 score: 23
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 5..221 score: 5.4E
None	No IPR available	PANTHER	PTHR31734:SF30	AUXIN-RESPONSIVE PROTEIN IAA14-RELATED	coord: 5..221 score: 5.4E
None	No IPR available	unknown	SSF54277	CAD & PB1 domains	coord: 104..206 score: 1.67