CmaCh10G011420.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G011420.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNA polymerase III polC-type
Location	Cma_Chr10 : 8059285 .. 8060664 (+)
Sequence length	1186

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAACAGCTTCGATGTGCTTCTCAATCTTGCGAGTTCCCAAATTTGGAGTCCCCACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGGTATGATCAGCTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGGACAAGAGATGGACCAGAAAATCTATGACTACAAAGGCGGGGAGGAAAGCAAAAACCAACCCGAGCAGTAAACCGAGCAATATCAGGAATGAAATCTTAGAGGAATCGGTTTCAACAAGTTGTACAGTTAGCATCAATAAGTCTGAGAAATATGGAACTCAGAAGCTTCAATGTTGTAATATTCAAGAAACGATTATTAAGGACAAGGAATTGGCTCGCCCGGTGACGGTTATAACCTTCGACATCGAAACAACAGGTTTTAGTAGAGAGCTGGATAGAATAGTGGAAATTGCTCTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAACCCAGAATGCTACATTCCAAATGCAGTTGTACATGGCATTACAAGTCGTATGGTCAGTCGACCCGACGTTCCAAGGTATCGACACGTTTTTTGTAATCTTATTTCTCAAATATTTACCGTTCAGCTCAGTGCTAGTTAAATATATAGACATATCTAAACATTTCTTGTTTATGTTCATATAGGATGAAGGAACTTATTCCAATCTTATTACAGTTTGTCAAAAGCCGTCAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTATCTTCGACGTGCCCTTTTTACTGAAGGAGTTCAGCCGTTGCTCGGTCGACATTCCTCTAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAGTTGATGAAATCCACAGGTTAGTTTTCGCTTTGCACATGTTATCTTGCTTTAGTTTCTCTATGGATAAAACGGACAATGTGACGTAATGTACTATCATGATCAGATTCGAAGATTACGAAAATTTCGTTGCAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACCGAGCAATGTCGGACGTGAGGACATTGTCGCTGATTCTTCAGCGGCTTACTTTCGACCTCAAGCTAGGTATCCCTGATCTCATTGAAAGATCTTTTACTACTTCTGATCTGATTAATAAGAAGAAGAAGTAGTGTGTTAAGTTATATGCAGAAATGAATCATAAGTGATGAGAAGCTGTGCTTTTGTTGTAATGTCATTTACTAATTGTAACTTCAGTTCATTCTTATTACCAAAATGTTGAGCCATTTTTATTTATGGTCAGCAGATTTGTTTTGATCTCCATATTCTTCAAGAACTGGTGCCTGAATTGGATTATCA

mRNA sequence

ATGATAACAGCTTCGATGTGCTTCTCAATCTTGCGAGTTCCCAAATTTGGAGTCCCCACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGGTATGATCAGCTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGGACAAGAGATGGACCAGAAAATCTATGACTACAAAGGCGGGGAGGAAAGCAAAAACCAACCCGAGCAGTAAACCGAGCAATATCAGGAATGAAATCTTAGAGGAATCGGTTTCAACAAGTTGTACAGTTAGCATCAATAAGTCTGAGAAATATGGAACTCAGAAGCTTCAATGTTGTAATATTCAAGAAACGATTATTAAGGACAAGGAATTGGCTCGCCCGGTGACGGTTATAACCTTCGACATCGAAACAACAGGTTTTAGTAGAGAGCTGGATAGAATAGTGGAAATTGCTCTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAACCCAGAATGCTACATTCCAAATGCAGTTGTACATGGCATTACAAGTCGTATGGTCAGTCGACCCGACGTTCCAAGGATGAAGGAACTTATTCCAATCTTATTACAGTTTGTCAAAAGCCGTCAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTATCTTCGACGTGCCCTTTTTACTGAAGGAGTTCAGCCGTTGCTCGGTCGACATTCCTCTAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAGTTGATGAAATCCACAGATTCGAAGATTACGAAAATTTCGTTGCAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACCGAGCAATGTCGGACGTGAGGACATTGTCGCTGATTCTTCAGCGGCTTACTTTCGACCTCAAGCTAGGTATCCCTGATCTCATTGAAAGATCTTTTACTACTTCTGATCTGATTAATAAGAAGAAGAAGTAGTGTGTTAAGTTATATGCAGAAATGAATCATAAGTGATGAGAAGCTGTGCTTTTGTTGTAATGTCATTTACTAATTGTAACTTCAGTTCATTCTTATTACCAAAATGTTGAGCCATTTTTATTTATGGTCAGCAGATTTGTTTTGATCTCCATATTCTTCAAGAACTGGTGCCTGAATTGGATTATCA

Coding sequence (CDS)

ATGATAACAGCTTCGATGTGCTTCTCAATCTTGCGAGTTCCCAAATTTGGAGTCCCCACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGGTATGATCAGCTTGGTTTTAGGATCTATAACCTTGAAGGAGGGCAGGACAAGAGATGGACCAGAAAATCTATGACTACAAAGGCGGGGAGGAAAGCAAAAACCAACCCGAGCAGTAAACCGAGCAATATCAGGAATGAAATCTTAGAGGAATCGGTTTCAACAAGTTGTACAGTTAGCATCAATAAGTCTGAGAAATATGGAACTCAGAAGCTTCAATGTTGTAATATTCAAGAAACGATTATTAAGGACAAGGAATTGGCTCGCCCGGTGACGGTTATAACCTTCGACATCGAAACAACAGGTTTTAGTAGAGAGCTGGATAGAATAGTGGAAATTGCTCTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACATTAATAAACCCAGAATGCTACATTCCAAATGCAGTTGTACATGGCATTACAAGTCGTATGGTCAGTCGACCCGACGTTCCAAGGATGAAGGAACTTATTCCAATCTTATTACAGTTTGTCAAAAGCCGTCAGAAACCTGATGGTTATGTATTGTTGGTAGCTCATAATGCTCGTATCTTCGACGTGCCCTTTTTACTGAAGGAGTTCAGCCGTTGCTCGGTCGACATTCCTCTAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAGTTGATGAAATCCACAGATTCGAAGATTACGAAAATTTCGTTGCAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACCGAGCAATGTCGGACGTGAGGACATTGTCGCTGATTCTTCAGCGGCTTACTTTCGACCTCAAGCTAGGTATCCCTGATCTCATTGAAAGATCTTTTACTACTTCTGATCTGATTAATAAGAAGAAGAAGTAG

Protein sequence

MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLKLGIPDLIERSFTTSDLINKKKK

Homology

[Close]

BLAST of CmaCh10G011420.1 vs. Swiss-Prot
Match: DPD1_ARATH (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.1e-61
Identity = 140/323 (43.34%), Postives = 204/323 (63.16%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           +T       T   S+ SN ++ +L  +V  +  +     E+  T+     N+Q+ + +DK
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRIID----EESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGI 185
           +L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDI 245
            + MV RP+VPRM+ELIPI L++V+SRQKP GYV+LVAHN + FD  FL+ EF+RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFDLKLGIPDLIERSFTTSDL 327
           +LT DLKL + DL+ R  T SD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of CmaCh10G011420.1 vs. Swiss-Prot
Match: DPO3_CLOTE (DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) GN=polC PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.9e-14
Identity = 64/200 (32.00%), Postives = 100/200 (50.00%), Query Frame = 1


Query: 134 ITFDIETTGFSRELDRIVEI-ALQDLSGGENSTFQTLINPECYIPNAVVH--GITSRMVS 193
           + FDIETTGFS + D+I+EI A++   G     + T +NPE  IP  ++   GI   MV 
Sbjct: 414 VVFDIETTGFSNKNDKIIEIGAVKIKEGKVVDKYSTFVNPERIIPEKIIELTGIHDYMVK 473

Query: 194 RPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIPLNWLF 253
             D P+++E++P  + F++         +LVAHNA  FDV F+ K      +       F
Sbjct: 474 --DAPKIEEVLPKFIDFIEDS-------ILVAHNAN-FDVSFIKKNCKDFGIH------F 533

Query: 254 FDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRLTFDLK 313
            + IL    L K    ++ +  L  + ++  IPL+ + HRA+ D +T   IL +   DLK
Sbjct: 534 NNPILDTIPLCKFLYPELKRYKLNVVAKHLGIPLL-NHHRAVEDAKTTGDILLKAFEDLK 593

Query: 314 ----LGIPDLIERSFTTSDL 327
               + +  L E  F   D+
Sbjct: 594 DKEIMNLNMLNEEYFKNQDI 596

[Close]

BLAST of CmaCh10G011420.1 vs. Swiss-Prot
Match: DPO3_CLOPE (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=polC PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.0e-11
Identity = 63/200 (31.50%), Postives = 95/200 (47.50%), Query Frame = 1


Query: 107 YGTQKLQCCNIQETIIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGE-NST 166
           YG +     N    +I   E +     + FDIETTGFS + D+I+EI    L  GE   +
Sbjct: 409 YGVEGYLADNGTPIVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDS 468

Query: 167 FQTLINPECYIPNAVVH--GITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAH 226
           F T ++P+  IP  +     IT  MV+    P + E++P  ++FV       G  +LVAH
Sbjct: 469 FSTFVDPKVNIPYKITELTSITQNMVN--GQPTIDEVLPKFMEFV-------GNSVLVAH 528

Query: 227 NARIFDVPFLLKEFSRCSVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIP 286
           NA  FDV F+ K      +   L     D + LAR L       + K+ L  + ++  I 
Sbjct: 529 NA-AFDVGFIKKNL--MDMGKTLKNPVMDTVPLARYLYPD----LKKVKLNLVAKHLGIS 588

Query: 287 LVGSAHRAMSDVRTLSLILQ 304
           L  + HRA+ D +  + IL+
Sbjct: 589 L-ENHHRAVDDAKATAEILK 591

[Close]

BLAST of CmaCh10G011420.1 vs. Swiss-Prot
Match: DPO3_CALS4 (DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=polC PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 57/189 (30.16%), Postives = 94/189 (49.74%), Query Frame = 1


Query: 134 ITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAV--VHGITSRMVS 193
           + FDIETTG S   D I+EI    +   +   TF+T +NP+  I + +  + GI   MV 
Sbjct: 389 VVFDIETTGLSNINDEIIEIGAVKIKNKKIVDTFETFVNPQIPISSFITKLTGIDESMVK 448

Query: 194 RPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIPLNWLF 253
             D P ++E++P  L+F K         +LVAHNA  FDV F+  +  +  + +    L 
Sbjct: 449 --DAPLIEEVLPKFLEFAKG-------AVLVAHNAN-FDVSFIKSKAKKLGLTVENTVL- 508

Query: 254 FDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVR-TLSLILQRLTFDL 313
            D + L+R L +     +    L  L E++ + L+   HRA+ D + T  + ++ L    
Sbjct: 509 -DTLELSRHLYQD----LKNYKLDTLAEFFEVKLL-HHHRAVEDAKATAEIFIKMLEKLQ 560

Query: 314 KLGIPDLIE 319
           ++GI  + E
Sbjct: 569 EIGIKSVSE 560

[Close]

BLAST of CmaCh10G011420.1 vs. Swiss-Prot
Match: DPO3_STAES (DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 12228) GN=polC PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.1e-08
Identity = 54/206 (26.21%), Postives = 97/206 (47.09%), Query Frame = 1


Query: 129 RPVTVITFDIETTGFSRELDRIVEIALQDLSGGE-NSTFQTLINPECYIPNAVVH--GIT 188
           +  T + FD+ETTG S + D+I+E+A   +  GE    F+   NP   +   +++   IT
Sbjct: 422 KDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHIT 481

Query: 189 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 248
             M++  D P ++E++    ++V       G  + VAHNA  FD+ F+   + R      
Sbjct: 482 DDMLT--DAPEIEEVLTEFKEWV-------GDAIFVAHNAS-FDMGFIDTGYERLGFGPS 541

Query: 249 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 308
            N      ++   +L ++ +++  K  L  L + Y + L    HRA+ D    + I  ++
Sbjct: 542 TN-----GVIDTLELSRTINTEYGKHGLNFLAKKYGVELT-QHHRAIYDTEATAYIFIKM 601

Query: 309 TFDLK-LGIPDLIERSFTTSDLINKK 331
              +K LG+ + +E        INKK
Sbjct: 602 VQQMKELGVNNHLE--------INKK 603

[Close]

BLAST of CmaCh10G011420.1 vs. TrEMBL
Match: A0A0A0LVY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.0e-143
Identity = 261/327 (79.82%), Postives = 285/327 (87.16%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTKAG KAKTNPSSKP+NIRNEIL+ES+  SCTV+INKSEK  TQKLQ C+IQ TIIK K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           E A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           +RMV  P VPRM+ELIPI+LQFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 305
           LNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFDLKLGIPDLIERSFTTSDLINKKKK 333
           TFDLKL I DL+ER+FT  DLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of CmaCh10G011420.1 vs. TrEMBL
Match: A0A0N9LRH7_CUCSA (Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 2.3e-143
Identity = 261/327 (79.82%), Postives = 284/327 (86.85%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTKAG KAKTNPSSKP+NIRNEIL+ESV  SCTV+INKSEK  TQKLQ C+IQ TIIK K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           E A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           +RMV  P VP M+ELIPI+LQFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 305
           LNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFDLKLGIPDLIERSFTTSDLINKKKK 333
           TFDLKL I DL+ER+FT  DLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of CmaCh10G011420.1 vs. TrEMBL
Match: V4TAW9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.9e-101
Identity = 203/335 (60.60%), Postives = 248/335 (74.03%), Query Frame = 1


Query: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQD--K 60
           M T  MCFSIL VPK  + +LAN  RE+FH  +R YGHS  +  L  + Y LE      +
Sbjct: 1   MRTVPMCFSILEVPKGRINSLANFCRESFHCFSRRYGHSPSFKLLCSKTYGLEDQDSYTE 60

Query: 61  RWTRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQ 120
           RW+R+ +TT      KT  S K  NI+ E      +TS T+++NK+E    Q++Q  +IQ
Sbjct: 61  RWSRRRITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIQ 120

Query: 121 ETIIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPN 180
           + I ++K+LA+ VT I FDIETTGFSRE +RI+EIA QDL GGENSTFQTL+NP+  +PN
Sbjct: 121 QIIAENKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPN 180

Query: 181 AVVHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFS 240
           A VHGIT+ MV +PDVPRM++LIPILL +VKSRQKP GY+L VAHNAR FDVPFL+ EFS
Sbjct: 181 AHVHGITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFS 240

Query: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRT 300
           RCS ++P NWLF D + LAR+LMKS  S + +K+SLQALREYY IPLVGSAHRAM+DV  
Sbjct: 241 RCSYEVPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYRIPLVGSAHRAMADVNC 300

Query: 301 LSLILQRLTFDLKLGIPDLIERSFTTSDLINKKKK 333
           LSLILQRLTFDLKL + DLIER FT SDLIN KKK
Sbjct: 301 LSLILQRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]

BLAST of CmaCh10G011420.1 vs. TrEMBL
Match: A0A067GQ64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.8e-101
Identity = 202/335 (60.30%), Postives = 248/335 (74.03%), Query Frame = 1


Query: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQD--K 60
           M T  MCFSIL VPK  + +LAN  RE+FH  +R YGHS  +  L  + Y LE      +
Sbjct: 1   MRTVPMCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTE 60

Query: 61  RWTRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQ 120
           RW+R+ +TT      KT  S K  NI+ E      +TS T+++NK+E    Q++Q  +I+
Sbjct: 61  RWSRRRITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIE 120

Query: 121 ETIIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPN 180
           + I ++K+LA+ VT I FDIETTGFSRE +RI+EIA QDL GGENSTFQTL+NP+  +PN
Sbjct: 121 QIIAENKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPN 180

Query: 181 AVVHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFS 240
           A VHGIT+ MV +PDVPRM++LIPILL +VKSRQKP GY+L VAHNAR FDVPFL+ EFS
Sbjct: 181 AHVHGITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFS 240

Query: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRT 300
           RCS ++P NWLF D + LAR+LMKS  S + +K+SLQALREYY IPLVGSAHRAM+DV  
Sbjct: 241 RCSYEVPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNC 300

Query: 301 LSLILQRLTFDLKLGIPDLIERSFTTSDLINKKKK 333
           LSLILQRLTFDLKL + DLIER FT SDLIN KKK
Sbjct: 301 LSLILQRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]

BLAST of CmaCh10G011420.1 vs. TrEMBL
Match: D7UA01_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01530 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 5.5e-100
Identity = 191/328 (58.23%), Postives = 244/328 (74.39%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MCFSIL+VP+  + TLA+ WRE+FH L      SS +  LG     LEGG  +RWTR+ +
Sbjct: 1   MCFSILQVPRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRWTRRPI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTK+  + K   SSK SNIR+EI++ +VSTS  + ++K E   +Q++Q C +QE + ++K
Sbjct: 61  TTKSEGRNKYTQSSKRSNIRHEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           +LA+ VTVI FD ETTG SR  DRI+EI LQDL GGENSTFQTL+NPE  +PN  VHGIT
Sbjct: 121 DLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGIT 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           + MV+RPDVPR K+LIPILLQ+V+SRQKP G +L VAHN R FDVPFL+ EFSRC+ ++P
Sbjct: 181 TYMVNRPDVPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITK-ISLQALREYYNIPLVGSAHRAMSDVRTLSLILQR 305
            NW F D + LAR+L+KS  S +    SLQALREYY IPLVG AHR +SDV TLS +LQ 
Sbjct: 241 PNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQM 300

Query: 306 LTFDLKLGIPDLIERSFTTSDLINKKKK 333
           LTF+LK+ + +L++RSFT SD+IN KKK
Sbjct: 301 LTFNLKVSVANLLDRSFTASDIINPKKK 328

[Close]

BLAST of CmaCh10G011420.1 vs. TAIR10
Match: AT5G26940.1 (AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 238.4 bits (607), Expect = 6.2e-63
Identity = 140/323 (43.34%), Postives = 204/323 (63.16%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI +V +  + +  +   E  H   +N   SS    L  R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           +T       T   S+ SN ++ +L  +V  +  +     E+  T+     N+Q+ + +DK
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRIID----EESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECY-IPNAVVHGI 185
           +L++ +TVI  D+ETTG  R+ +RI+EIA QD++GG  STFQTL+NP    I NA +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDI 245
            + MV RP+VPRM+ELIPI L++V+SRQKP GYV+LVAHN + FD  FL+ EF+RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFDLKLGIPDLIERSFTTSDL 327
           +LT DLKL + DL+ R  T SD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of CmaCh10G011420.1 vs. NCBI nr
Match: gi|449435615|ref|XP_004135590.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-143
Identity = 261/327 (79.82%), Postives = 285/327 (87.16%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTKAG KAKTNPSSKP+NIRNEIL+ES+  SCTV+INKSEK  TQKLQ C+IQ TIIK K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           E A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           +RMV  P VPRM+ELIPI+LQFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 305
           LNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFDLKLGIPDLIERSFTTSDLINKKKK 333
           TFDLKL I DL+ER+FT  DLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of CmaCh10G011420.1 vs. NCBI nr
Match: gi|932246042|gb|ALG62680.1| (exonuclease DPD1 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 3.4e-143
Identity = 261/327 (79.82%), Postives = 284/327 (86.85%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MC SI R PK+GVP LANLWRENFHPLNRN+GH+ WYDQL FRIYNLEGG++KRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTKAG KAKTNPSSKP+NIRNEIL+ESV  SCTV+INKSEK  TQKLQ C+IQ TIIK K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           E A  VTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLINP+CYI N+ +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           +RMV  P VP M+ELIPI+LQFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 305
           LNWLFFD + LARQLMK +DSKITKI+LQAL EYY I L G AHRA+SDVR LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFDLKLGIPDLIERSFTTSDLINKKKK 333
           TFDLKL I DL+ER+FT  DLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of CmaCh10G011420.1 vs. NCBI nr
Match: gi|659099409|ref|XP_008450585.1| (PREDICTED: three prime repair exonuclease 2 [Cucumis melo])

HSP 1 Score: 510.4 bits (1313), Expect = 2.4e-141
Identity = 256/327 (78.29%), Postives = 284/327 (86.85%), Query Frame = 1


Query: 6   MCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRWTRKSM 65
           MCFSI R PKFGVP LANLWRENFHPLNRN+GHS WYDQL FRIYNLEGGQ+KRWTRKS+
Sbjct: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQETIIKDK 125
           TTKAG KAKTNPSSKP+NI NEIL+ES+S SCTV++NKSEK GTQKLQ C+IQ TIIK K
Sbjct: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAVVHGIT 185
           E   PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLI+P+CYI N+ +HGIT
Sbjct: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180

Query: 186 SRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRCSVDIP 245
           + MV+   VPRM+ELIPI+LQFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR S+DIP
Sbjct: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240

Query: 246 LNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSLILQRL 305
            +WLF D + LARQLMK +DSKITKISL+AL EYY I + G AHRA+ DV +LSLILQRL
Sbjct: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300

Query: 306 TFDLKLGIPDLIERSFTTSDLINKKKK 333
           TFDLKL + DL+ER+FT  DLINKKKK
Sbjct: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 327

[Close]

BLAST of CmaCh10G011420.1 vs. NCBI nr
Match: gi|1009116747|ref|XP_015874941.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 394.8 bits (1013), Expect = 1.5e-106
Identity = 206/330 (62.42%), Postives = 254/330 (76.97%), Query Frame = 1


Query: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60
           M TA+MCFSIL+ P+F + TL N W  NFH   R Y +SS     G  +  LEGG+ K+W
Sbjct: 1   MRTATMCFSILQGPRFKIHTLVNFWSGNFHSWTRTYSNSSKLH--GSIVNGLEGGKSKKW 60

Query: 61  TRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQET 120
           TR+ +TTKA  +AK   SSK S+IR+E+ + +VST+ T++INK+E    QK+Q  +IQ+ 
Sbjct: 61  TRRPVTTKAEERAKRIHSSKTSSIRHEVFDGAVSTNATLNINKTEINQFQKIQYYDIQKI 120

Query: 121 IIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180
           I ++K+LA  VTV+ FDIETTGFSRE D I+E ALQ L GGENSTFQTL+NPE  I N+ 
Sbjct: 121 IAENKDLANLVTVVAFDIETTGFSRENDGIIEFALQVLQGGENSTFQTLVNPERNITNSH 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRC 240
           VHGIT  MV RP VPRM+ELIPILLQ+VKS QKP G+++ VAHN+R FDVPFLL EFSRC
Sbjct: 181 VHGITKNMVDRPGVPRMRELIPILLQYVKSHQKPGGFIMWVAHNSRSFDVPFLLSEFSRC 240

Query: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300
           S+++P NWLF D I LAR+LMKS  SK++KISLQALREYY IPL+GSAHRAMSDVR+LSL
Sbjct: 241 SIELPPNWLFLDTIPLARELMKSEGSKLSKISLQALREYYGIPLIGSAHRAMSDVRSLSL 300

Query: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKK 331
           I QRLT+DLKL +P L+ERSF  SD+  KK
Sbjct: 301 IFQRLTYDLKLTMPGLVERSFLGSDIKKKK 328

[Close]

BLAST of CmaCh10G011420.1 vs. NCBI nr
Match: gi|568836267|ref|XP_006472167.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Citrus sinensis])

HSP 1 Score: 377.9 bits (969), Expect = 1.9e-101
Identity = 203/335 (60.60%), Postives = 249/335 (74.33%), Query Frame = 1


Query: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQD--K 60
           M T  MCFSIL VPK  + +LAN  RE+FH  +R YGHS  +  L  + Y LE      +
Sbjct: 1   MRTVPMCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTE 60

Query: 61  RWTRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQ 120
           RW+R+ +TT      KT  S K  NI+ E      +TS T+++NK+E    Q++Q  +I+
Sbjct: 61  RWSRRRITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIE 120

Query: 121 ETIIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPN 180
           + I ++K+LA+ VT I FDIETTGFSRE +RI+EIALQDL GGENSTFQTL+NP+  +PN
Sbjct: 121 QIIAENKDLAKLVTAIVFDIETTGFSRENERIIEIALQDLLGGENSTFQTLVNPKRQVPN 180

Query: 181 AVVHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFS 240
           A VHGIT+ MV +PDVPRM++LIPILL +VKSRQKP GY+L VAHNAR FDVPFL+ EFS
Sbjct: 181 AHVHGITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFS 240

Query: 241 RCSVDIPLNWLFFDNILLARQLMKSTDSKI-TKISLQALREYYNIPLVGSAHRAMSDVRT 300
           RCS ++P NWLF D + LAR+LMKS  S + +K+SLQALREYY IPLVGSAHRAM+DV  
Sbjct: 241 RCSYEVPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNC 300

Query: 301 LSLILQRLTFDLKLGIPDLIERSFTTSDLINKKKK 333
           LSLILQRLTFDLKL + DLIER FT SDLIN KKK
Sbjct: 301 LSLILQRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

The following BLAST results are available for this feature:

BLAST of CmaCh10G011420.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPD1_ARATH	1.1e-61	43.34	Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE...	[more]
DPO3_CLOTE	2.9e-14	32.00	DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) ...	[more]
DPO3_CLOPE	3.0e-11	31.50	DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=...	[more]
DPO3_CALS4	1.2e-10	30.16	DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongens...	[more]
DPO3_STAES	4.1e-08	26.21	DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 12228) G...	[more]

BLAST of CmaCh10G011420.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVY3_CUCSA	1.0e-143	79.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1	[more]
A0A0N9LRH7_CUCSA	2.3e-143	79.82	Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1	[more]
V4TAW9_9ROSI	2.9e-101	60.60	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1	[more]
A0A067GQ64_CITSI	3.8e-101	60.30	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1	[more]
D7UA01_VITVI	5.5e-100	58.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01530 PE=4 SV=...	[more]

BLAST of CmaCh10G011420.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26940.1	6.2e-63	43.34	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CmaCh10G011420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435615\|ref\|XP_004135590.1\|	1.5e-143	79.82	PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|932246042\|gb\|ALG62680.1\|	3.4e-143	79.82	exonuclease DPD1 [Cucumis sativus]	[more]
gi\|659099409\|ref\|XP_008450585.1\|	2.4e-141	78.29	PREDICTED: three prime repair exonuclease 2 [Cucumis melo]	[more]
gi\|1009116747\|ref\|XP_015874941.1\|	1.5e-106	62.42	PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba]	[more]
gi\|568836267\|ref\|XP_006472167.1\|	1.9e-101	60.60	PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G011420	CmaCh10G011420	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G011420.1	CmaCh10G011420.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G011420.1.exon.3	CmaCh10G011420.1.exon.3	exon
CmaCh10G011420.1.exon.2	CmaCh10G011420.1.exon.2	exon
CmaCh10G011420.1.exon.1	CmaCh10G011420.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G011420.1.CDS.1	CmaCh10G011420.1.CDS.1	CDS
CmaCh10G011420.1.CDS.2	CmaCh10G011420.1.CDS.2	CDS
CmaCh10G011420.1.CDS.3	CmaCh10G011420.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G011420.1.three_prime_UTR.1	CmaCh10G011420.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 128..308 score: 2.4
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 132..305 score: 4.83
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 135..298 score: 7.7
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 132..311 score: 8.0
None	No IPR available	PANTHER	PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	coord: 52..332 score: 9.4E
None	No IPR available	PANTHER	PTHR13058:SF19	PROTEIN W02F12.4, ISOFORM D	coord: 52..332 score: 9.4E