CmaCh10G010850.1 (mRNA) Cucurbita maxima (Rimu)

Overview
NameCmaCh10G010850.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCytochrome c oxidase subunit 1
LocationCma_Chr10 : 7142194 .. 7148171 (+)
Sequence length795
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCGATGATACGTGGATCTGGTAATTGGTTTGTTTCGATTCTGATAGGTGCACCTGACATGGCATTTCGACGATTAAATAATATTTCATTCTGATTGTTGCCATCAAGTCTCTTGCTCCTATTAAGCTCAGCCTTAGTAGAAGTGGGTAGCGGCACTAGGTGGACGGTCTATCTGCCCTTTAAAGTGGTATTACCAGCCATTCTGGAGTAGCAGTTGATTCAGCAATTTATAGTCTTCATCTATCTGGTATTTCATCCATTTTAGGTTCTATCAATTTTATAACGGTTATTACCAACATGCGTGGACTTGGAATGACTATGCATAGATCACCCTTTTTTGTGTGGTCCATTCTAGTGGCAGCATTCCCACTTTTATTGTCACTTCCGGTACTAGTAGGGCTATTACCATGTAATTAACCGATCGAAACTTTAATACAACTTTTTCTGATCCCGCTGAAGGGGGAGACCCCATTTATACCAGCATCTCTTTCGGTTTTTCGGTCATCTAGAGGTGTATATTCCCATTCTGCGTGGATCCGGTATCATCAGTCATATCGTTTCTACTTTTTTGGTAAAACTGGTTTTCGGGTATCTAGGCATGGTTTATGCCATGATTAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATTATATGTTTACTATGGGATTAGACGTTGATACCCGTGCCTACTTCACCACTACTACCTGTTAGGTTATGGAGTATACTCTCTTATTTATAACTTGGTCAACTGTTATATTTGGTAAAGCTATATATAGTAAAGCTATATCCGATAAAGCTATATATGGTAAATAGCTATATATAGTAGATGGTTAAATCTGGTAAAACTATATATAGTAACCTGAACCATATATATATCCGGTCCGGTAGAGCTTTGAAAATGTACTTTCTGTATTCTCTGTAATTCTCTCTTATTGTACATACGTGAAGTCATCAATAAAAAAAAAAAAAAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCACTTTTCTCTATCCTGTTCTTTGTGTTCATCTAGATCAAGCATGTGCGTGCGACCCTAACAACTGGTATCAGAGCTAGGTGAAATTCACCGAAAGTTCAAAGATTGGAATTGAGAAGTTTGATGGATCCAATTTCGGTTTCTAGAAGATGCAGATTAAAGATTATTTGTACCAAAAAGATCTTCACGAACCTCTGTTGGGGGTGAAGCCGGATACCATGACCATGGAGCAGTGGAAGCTCACGGATCGACAAGCCTTGGGGATGATCCAGTTGACGCTATCCAAAAACGTGGCCTTTAACATTATCAAGGAGAAGACAACGTCAAATCTATTGAAGGCGCTGTCAAATATGTATGAAAAACCGTCGGCTATGAACAAGGTGTATTTGATGCGGAGATTGTTCAATCTACAGATTTCTGAAGGTGAATCTATTGCTGGTCATATAAATAAATTCAATATGATCATAAGTCTAAGTTCGGTGGAAATTAATTTCGAAGATAAAATTAAAGCGTTGATTTTAATGTCATCCTTACCTGAGTCATGGGATACTGTTGTTGCCGCAATCAGCAGTTCCCGAGGATCTGATAAACTGAAGTTTGATGAAATTCGAGATGTAGTTCTCAGTGAAAGTATTCGCAAGCGGGAAACTGGAGATTCATCAGGCAATGCTCTCAGTGTTGATCGAAGGGGAAGAAGTAAATCAAAGAGCTCAAACAAACATGGGCGATCAAAATCAAAGAACCGAAAAAAATCTCCAAACAAACCCAACGTAACGTGTTGGAGCTGTGGGAGAAAAGAACACTTTCGGACAGATTGTACAAAACTGAAGAAGAAGCAGAATCATAAATCTGAAGATGATGATGATTTTATATATACAACAGAAGACACTGAGAACGTTTTAATCCTTAGTGTGGACAGCCCAGCTGAATTCTAGATTTTGGATTCAGGTGCATCGTTCCATTCATCTCCAAGTAATGAATTGTTTCGAAATTTCAAATCAGGAAATTTCGAGGTGGTGTATCTTGCCGACAACAAAACCTTGGAGATTGAAGGGAAGGGAGATGTCTCCATACAAACTTCAGCAGGAAATCAGTGGATATTACGAGATGTCAGATACATTCCTAGTCTCAAGAAGAACCTGATCTCTATTGGTCAGTTGAATAGCACAGGCTATACAGTAGAGTTTGGAAAGAGTTCATGGAAGATTGTGAAGGGCGCCATGGTTGTTGCACGTGGCACAAAATCCGGAACCTTATACACTACTGCAGAGTGTATAAACATGACTGCTGCTACTGAGAGGGCTTCCAATTCAAGTCTATGGCACAATAAACTTGGACATATGAGCGTCAAAGGAATGAAGATGCTGACTTTGAAAGGAGCTTTAGAAGGCTTAAAATCTGTTGATATGGTCTTTGTGAGAGCTGTGCTATAGGCAAACAGAAAAGAGTTAGTTTCACAAAAGCTGCCAGAGAACCGAAGAAATTGTGGTTGGAAATGATCCATACAGACGTCTGGGGATCATCTCCAGTTTCATCACTTGGTGGATCAAGGTACTACGTCACCTTCATCGATGACTTCAGCAGGAAGGTATGGGTTTACTTTCTGAAACACAAGTCAGATGTGTTTACCACCTTCAAGAAGTTGAAAGTTGAAGTTGAAAATCAAACCGGCTTGAATATCAAATGTCTGAGATCTGACTATGGAGAAGAGTACAACAAATCAGAGTTTATAAAATTTTGTGCAGTTGAGGGAATTAGATTAATAAGAACAATTCCCGGTAAGGCAAGATAAAATGGTATTGTAGAAAGAATGAACAGAACATTGAATGAGCGAGCAAGAAGCATGAGGATTCACTCTAGACTACCAAAGACATTCTAGGCTAATGCTGTGAACACAACAGCATATTTGATTAATAGAGGGTTGTCAGTACCCTTGAAGTTCAAATTTCCCTCATGTGCAAGAGTGCAGCTCCAGGCAAGTTTGACTCCTTGGGATGAGAATTTCTCGAGATAGATCTGCTGGCACGTTAAATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAACGCTAAACCTAGGACTACCCCCTTGGCAAATCATATTAAATTGTCAAAGGGGAAATCTCCCAAGACAGTTGAGGAACGTGAGCACATGGCATCAATTTCGTACGCTTCTGCAGTTGGGAGTTTGATGTATGCTATGGTCTGCACTAGACCTGACATAACACATGCAGTGGGAGTTGTTAGCAAATACATGGCAAATTAGGGGAAGGAAAATTGGAAAGATGTGAAGTGGCTTCTGAGATCTGAGAGGTACATCCAATACTTCACTTTGTTATGGTAATGACAAAGTAGTTCTGCAAGGTTTTGTGGATGCTTATCTGAGTGGAGATGTAGACTCTACCAAGAGCACATCTGGACATATCTACATTATAGATGGAACAGCAGTGAGTTGGATGTCCAAGCTTCAGAAATGCATTGCTCTTTCATCTACTAAAGCTGAGTATGTGGCCATAGCTGAAACTGGAAAGGAGATGATATAGATGACAGACTATCTAGAAGAATTAGGCCGGAAGTAGTGCAAGAAGATCCTTTATACAGATAGTCAGAGTGCCATACAGTTGGTGAAAACCCCAGTCTATCATTCAAGGACAAAACACATTAGAAGACGATACCATTTCACTCGCAGGTTAGTGGAAGAAGGTGATATGTGTTTGGAGAAGATAGAGAGTGCAAAGAATCTAACAGACATGTTGACAAAATGTGTTGATGTTTGAAAATTAAGGTTATGCAAAGCCTTAATTGGTATGGTGTAGGATCAGTCTCCAAGTGGGAGAATTGTTAGGTTATGAAATCTACTCTCTCATTTATTGCTTGGTCAACTGTTATATTTGGTAAAGCTATATACGGTAAATAGCTATATATAGTAGATGGTTAAATCTGGTAAAACTATATATAGTAAACTGAATCATATATATATCCCGTCTGATAGAACTTTGAAAATGTACTTTATGTATTCTCTGTAATTCTCTCTTACTGTACATAAGTGAAGTCATCAATAAAAAAAAATCCTTTTAGCCAGAGTTCTCTTTGCACTTTTCTCTATCCTGTTCTTTGTGTTCATCTAGATCAAGCGTGTGCGTTGTTGTGCGACCCTAACACTATCATGATCATAGTAGTCCCCACTGGAATTAAAATCTTTAGTTGGATCGCTACCATGTGGGGGGGTTCGATACAATACAAGACACCCATATTATTTGTTGTAGGGTCCATCTTTTTATTCACCATAGCAGGACTCACTGGAATAGTCCCGGCAAATTTAGGGCTAGATATTGTCCTACATGATACTTATTATGTGGTTGCACATTTCAATTAAGTACTTTCTATGGGAGCCGTTTTTGCTTTATTTGCAGGATTTCACTATTGGGTGGGTAAAATCTTTCGTTGGACATACCCTGAAACTTTGTCAAATCCATTTTTGGATCAATTTTTTCGAGGTTAATCCAACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACATCGCATTCCTGATTATCCAGATGCTTACACTGGATGGAATGCCTTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTTGTTTCTTCGTGGTCGTAACAATCACTTCAAGTAGTGGAAATAATAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACATAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAACTTTTCATACTTTTGGAGAACTTCCAACTATCAAGGAGACGAAAAGCTATGTGAAGTAAAAGAATAAAAAGTCATTGACTGCTACTAAGAACCTAACAGAACTTTTCAAAATGTGGGTTCTAAAACCACTTGTGTAGGTCGGGGTTGAGAATTGGGGGGCCAACGAGGCTAGGGCCTGATTTTCCAGCAATGACCGGTCAAGGTCAATCAAAATGGGGAAAAATAAATCATTCTCAACATAGAAGAGATCTTAACAAGTCTGATCACCATCTCTATAAGGATTGAACGCCGGATTGATCATCGACTCAATACCTATTATCTTGTCACTAAACATTACAACACGTCTCCTAAAAGGTCAACAAAGAGCGCCTCCCTACACACTAAACTAAAAAACTGAACCCCTTGAACCAATAAAGCATTCCATTGAATGAAGCCCACTTCCCTCTAGCAAAGCAACTTTCGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAACTCTTGCTCACAGGCTCCCTGAAACCAAAAGAGGAGACAGAAGATGCATAAGATGTAGAGGATAATATGGATGAAGAGTGAGCCTCTCTCCTATGTCTAGGAGTAGAGAAGAGAGCACCTTCAACCGACAAAGCATTTCTTTCCTTTACTGCTTGGCCAAGATATGTTAAACAAAACCTTCTTAAAAAATCTCTCTCAAGGTGGATAATGGGATGGTCTGCTATTTTGACGTTTTCTTTTCCAATGTGTTGAAGGAAAGCAAAGAATCTCAGCTTCTTGCAGGTCCCAATAAGCGGGTAACTTAGGTCTACTCGTCTTGGAAAGCCTCACTTTTTCAGCAAAGACCAGAATCGATTCAATCAATTGAAATCAATGCGAGTCCACCAGGAAGGAATATTCTGAGGCGGGCAAGGAAGGAAGAGGCGGGATATGTCGTCAGTGTAGAAAAAGAATCTTCTCATTCATAA

mRNA sequence

ATGTCGGCGATGATACGTGGATCTGAGGTGTATATTCCCATTCTGCGTGGATCCGGTATCATCAGTCATATCGTTTCTACTTTTTTGGTAAAACTGGTTTTCGGGTATCTAGGCATGGTTTATGCCATGATTAGTATAGGGTCCATCTTTTTATTCACCATAGCAGGACTCACTGGAATAGTCCCGGCAAATTTAGGGCTAGATATTGTCCTACATGATACTTATTATGTGGATTTCACTATTGGGTGGGTAAAATCTTTCGTTGGACATACCCTGAAACTTTGTCAAATCCATTTTTGGATCAATTTTTTCGAGGTTAATCCAACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACATCGCATTCCTGATTATCCAGATGCTTACACTGGATGGAATGCCTTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTTGTTTCTTCGTGGTCGTAACAATCACTTCAAGTAGTGGAAATAATAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACATAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAACTTTTCATACTTTTGGAGAACTTCCAACTATCAAGGAGACGAAAAGCTATGAAAGCAAAGAATCTCAGCTTCTTGCAGGTCCCAATAAGCGGCAAAGACCAGAATCGATTCAATCAATTGAAATCAATGCGAGTCCACCAGGAAGGAATATTCTGAGGCGGGCAAGGAAGGAAGAGGCGGGATATGTCGTCAGTGTAGAAAAAGAATCTTCTCATTCATAA

Coding sequence (CDS)

ATGTCGGCGATGATACGTGGATCTGAGGTGTATATTCCCATTCTGCGTGGATCCGGTATCATCAGTCATATCGTTTCTACTTTTTTGGTAAAACTGGTTTTCGGGTATCTAGGCATGGTTTATGCCATGATTAGTATAGGGTCCATCTTTTTATTCACCATAGCAGGACTCACTGGAATAGTCCCGGCAAATTTAGGGCTAGATATTGTCCTACATGATACTTATTATGTGGATTTCACTATTGGGTGGGTAAAATCTTTCGTTGGACATACCCTGAAACTTTGTCAAATCCATTTTTGGATCAATTTTTTCGAGGTTAATCCAACCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACATCGCATTCCTGATTATCCAGATGCTTACACTGGATGGAATGCCTTTAGCAGTTTTGGCTCTTATATATCCGTAGTTGGGATTCGTTGTTTCTTCGTGGTCGTAACAATCACTTCAAGTAGTGGAAATAATAAAAGATGTGCTCCAAGTCCTTGGGCTGTTGAACATAATTCAACCACACTGGAATGGATGGTACAAAGTCCTCCAACTTTTCATACTTTTGGAGAACTTCCAACTATCAAGGAGACGAAAAGCTATGAAAGCAAAGAATCTCAGCTTCTTGCAGGTCCCAATAAGCGGCAAAGACCAGAATCGATTCAATCAATTGAAATCAATGCGAGTCCACCAGGAAGGAATATTCTGAGGCGGGCAAGGAAGGAAGAGGCGGGATATGTCGTCAGTGTAGAAAAAGAATCTTCTCATTCATAA

Protein sequence

MSAMIRGSEVYIPILRGSGIISHIVSTFLVKLVFGYLGMVYAMISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVDFTIGWVKSFVGHTLKLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGSYISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIKETKSYESKESQLLAGPNKRQRPESIQSIEINASPPGRNILRRARKEEAGYVVSVEKESSHS
Homology
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BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match: COX1_OENBE (Cytochrome c oxidase subunit 1 OS=Oenothera berteroana GN=COX1 PE=3 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-68
Identity = 131/185 (70.81%), Postives = 139/185 (75.14%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFT+ GL GIVPAN GLDI LHDTYY         ++G           WV 
Sbjct: 341 LFAVGSIFLFTVGGLAGIVPANSGLDIALHDTYYAGAHFHYVLSMGAVFALFAGFRYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPT FPMHFLGLSGMP  IPDYP++Y GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRPIPDYPESYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP  K
Sbjct: 461 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEKNSTTLEWMVQSPPAFHTFGELPATK 520

[Close]
BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match: COX1_RAPSA (Cytochrome c oxidase subunit 1 OS=Raphanus sativus GN=COX1 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.0e-66
Identity = 132/185 (71.35%), Postives = 138/185 (74.59%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYV------DFTIG-----------WVK 102
           + ++G IFLFTI GLTGIV AN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVG 400

Query: 103 SFVGHTL--KLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VN T FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGI CFFVVVTIT SSGNNKRCAPSPWA+E NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGICCFFVVVTITLSSGNNKRCAPSPWALELNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match: COX1_ARATH (Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana GN=COX1 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.0e-66
Identity = 132/185 (71.35%), Postives = 138/185 (74.59%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYV------DFTIG-----------WVK 102
           + ++G IFLFTI GLTGIV AN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVG 400

Query: 103 SFVGHTL--KLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VN T FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGI CFFVVVTIT SSGNNKRCAPSPWA+E NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGICCFFVVVTITLSSGNNKRCAPSPWALELNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match: COX1_BETVU (Cytochrome c oxidase subunit 1 OS=Beta vulgaris GN=COX1 PE=3 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.7e-65
Identity = 130/184 (70.65%), Postives = 136/184 (73.91%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYV------DFTIG-----------WVK 102
           + ++G IFLFT+ GLTGIV AN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTVGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVG 400

Query: 103 SFVGHTL--KLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VN T FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 208
           YISVVGI CFFVVVTIT SSG NKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGICCFFVVVTITLSSGKNKRCAPSPWAVEENSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match: COX1_MAIZE (Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-63
Identity = 128/187 (68.45%), Postives = 136/187 (72.73%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYV------DFTIG-----------WVK 102
           + ++G IFLFTI GLTGIV AN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVG 400

Query: 103 SFVGHTL--KLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VN T FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 211
           YISVVGIR FFVVV ITSSSG NKRCA SPWAVE N TTLEW+VQSPP FHTFGELPTIK
Sbjct: 461 YISVVGIRRFFVVVAITSSSGKNKRCAESPWAVEQNPTTLEWLVQSPPAFHTFGELPTIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match: A0A0X8GIS1_9MYRT (Cytochrome c oxidase subunit 1 OS=Oenothera suffrutescens PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-69
Identity = 137/185 (74.05%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFT+ GLTGIVPAN GLDI LHDTYY         ++G           WV 
Sbjct: 341 LFAVGSIFLFTVGGLTGIVPANSGLDIALHDTYYAVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEKNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match: A0A0X8GL24_9MYRT (Cytochrome c oxidase subunit 1 OS=Oenothera nuttallii PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-69
Identity = 137/185 (74.05%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFT+ GLTGIVPAN GLDI LHDTYY         ++G           WV 
Sbjct: 341 LFAVGSIFLFTVGGLTGIVPANSGLDIALHDTYYAVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEKNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match: G3EU24_CUCME (Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo GN=cox1 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.8e-68
Identity = 136/185 (73.51%), Postives = 142/185 (76.76%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 342 LFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 401

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 402 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 461

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGN KRCAPSPWA+E NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 462 YISVVGIRRFFVVVTITSSSGNQKRCAPSPWALEQNSTTLEWMVQSPPAFHTFGELPAIK 521

[Close]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match: A0A0X8GIK9_9ROSI (Cytochrome c oxidase subunit 1 OS=Croton texensis PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67
Identity = 136/185 (73.51%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++G IFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPT FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match: A0A0X8GK60_OXADI (Cytochrome c oxidase subunit 1 OS=Oxalis dillenii PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.2e-67
Identity = 136/185 (73.51%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++G IFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPT FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGNNKRCAPSPWAVE NSTT EWMVQSPP FHTFGELPTIK
Sbjct: 461 YISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTPEWMVQSPPAFHTFGELPTIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. TAIR10
Match: ATMG01360.1 (ATMG01360.1 cytochrome oxidase)

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-67
Identity = 132/185 (71.35%), Postives = 138/185 (74.59%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYV------DFTIG-----------WVK 102
           + ++G IFLFTI GLTGIV AN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVG 400

Query: 103 SFVGHTL--KLCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VN T FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGI CFFVVVTIT SSGNNKRCAPSPWA+E NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGICCFFVVVTITLSSGNNKRCAPSPWALELNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match: gi|984914737|gb|AMC32795.1| (cytochrome c oxidase subunit 1 (mitochondrion) [Oenothera suffrutescens])

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69
Identity = 137/185 (74.05%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFT+ GLTGIVPAN GLDI LHDTYY         ++G           WV 
Sbjct: 341 LFAVGSIFLFTVGGLTGIVPANSGLDIALHDTYYAVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEKNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match: gi|345034422|gb|AEN56108.1| (cytochrome c oxidase subunit 1 [Cucumis melo subsp. melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 136/185 (73.51%), Postives = 142/185 (76.76%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++GSIFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 342 LFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 401

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 402 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 461

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGN KRCAPSPWA+E NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 462 YISVVGIRRFFVVVTITSSSGNQKRCAPSPWALEQNSTTLEWMVQSPPAFHTFGELPAIK 521

[Close]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match: gi|984914730|gb|AMC32792.1| (cytochrome c oxidase subunit 1 (mitochondrion) [Croton texensis])

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 136/185 (73.51%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++G IFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPT FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGNNKRCAPSPWAVE NSTTLEWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTLEWMVQSPPAFHTFGELPAIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match: gi|984914757|gb|AMC32805.1| (cytochrome c oxidase subunit 1 (mitochondrion) [Oxalis dillenii])

HSP 1 Score: 263.8 bits (673), Expect = 3.1e-67
Identity = 136/185 (73.51%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++G IFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPT FPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGNNKRCAPSPWAVE NSTT EWMVQSPP FHTFGELPTIK
Sbjct: 461 YISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTPEWMVQSPPAFHTFGELPTIK 520

[Close]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match: gi|224020966|ref|YP_002608199.1| (cytochrome c oxidase subunit 1 [Carica papaya])

HSP 1 Score: 263.5 bits (672), Expect = 4.1e-67
Identity = 136/185 (73.51%), Postives = 141/185 (76.22%), Query Frame = 1 

Query: 43  MISIGSIFLFTIAGLTGIVPANLGLDIVLHDTYYVD------FTIG-----------WVK 102
           + ++G IFLFTI GLTGIVPAN GLDI LHDTYYV        ++G           WV 
Sbjct: 341 LFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWVG 400

Query: 103 SFVGHTLK--LCQIHFWINFFEVNPTLFPMHFLGLSGMPHRIPDYPDAYTGWNAFSSFGS 162
              G T    L QIHFWI FF VNPTLFPMHFLGLSGMP RIPDYPDAY GWNA SSFGS
Sbjct: 401 KIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFGS 460

Query: 163 YISVVGIRCFFVVVTITSSSGNNKRCAPSPWAVEHNSTTLEWMVQSPPTFHTFGELPTIK 209
           YISVVGIR FFVVVTITSSSGNNKRCAPSPWAVE NSTT EWMVQSPP FHTFGELP IK
Sbjct: 461 YISVVGIRRFFVVVTITSSSGNNKRCAPSPWAVEQNSTTPEWMVQSPPAFHTFGELPAIK 520

The following BLAST results are available for this feature:
BLAST of CmaCh10G010850.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX1_OENBE1.7e-6870.81Cytochrome c oxidase subunit 1 OS=Oenothera berteroana GN=COX1 PE=3 SV=2[more]
COX1_RAPSA2.0e-6671.35Cytochrome c oxidase subunit 1 OS=Raphanus sativus GN=COX1 PE=3 SV=1[more]
COX1_ARATH2.0e-6671.35Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana GN=COX1 PE=3 SV=1[more]
COX1_BETVU1.7e-6570.65Cytochrome c oxidase subunit 1 OS=Beta vulgaris GN=COX1 PE=3 SV=2[more]
COX1_MAIZE1.6e-6368.45Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2[more]
BLAST of CmaCh10G010850.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0X8GIS1_9MYRT1.8e-6974.05Cytochrome c oxidase subunit 1 OS=Oenothera suffrutescens PE=3 SV=1[more]
A0A0X8GL24_9MYRT1.8e-6974.05Cytochrome c oxidase subunit 1 OS=Oenothera nuttallii PE=3 SV=1[more]
G3EU24_CUCME9.8e-6873.51Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo GN=cox1 PE=3 SV=1[more]
A0A0X8GIK9_9ROSI1.3e-6773.51Cytochrome c oxidase subunit 1 OS=Croton texensis PE=3 SV=1[more]
A0A0X8GK60_OXADI2.2e-6773.51Cytochrome c oxidase subunit 1 OS=Oxalis dillenii PE=3 SV=1[more]
BLAST of CmaCh10G010850.1 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG01360.11.1e-6771.35ATMG01360.1 cytochrome oxidase[more]
BLAST of CmaCh10G010850.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|984914737|gb|AMC32795.1|2.5e-6974.05cytochrome c oxidase subunit 1 (mitochondrion) [Oenothera suffrutescens][more]
gi|345034422|gb|AEN56108.1|1.4e-6773.51cytochrome c oxidase subunit 1 [Cucumis melo subsp. melo][more]
gi|984914730|gb|AMC32792.1|1.8e-6773.51cytochrome c oxidase subunit 1 (mitochondrion) [Croton texensis][more]
gi|984914757|gb|AMC32805.1|3.1e-6773.51cytochrome c oxidase subunit 1 (mitochondrion) [Oxalis dillenii][more]
gi|224020966|ref|YP_002608199.1|4.1e-6773.51cytochrome c oxidase subunit 1 [Carica papaya][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000883Cyt_C_Oxase_1
IPR023616Cyt_c_oxase-like_su1_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
GO:0005506iron ion binding
GO:0009055electron carrier activity
GO:0020037heme binding
Vocabulary: Biological Process
TermDefinition
GO:0009060aerobic respiration
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0015992 proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045277 respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh10G010850CmaCh10G010850gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh10G010850.1CmaCh10G010850.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh10G010850.1.exon.1CmaCh10G010850.1.exon.1exon
CmaCh10G010850.1.exon.2CmaCh10G010850.1.exon.2exon
CmaCh10G010850.1.exon.3CmaCh10G010850.1.exon.3exon
CmaCh10G010850.1.exon.4CmaCh10G010850.1.exon.4exon
CmaCh10G010850.1.exon.5CmaCh10G010850.1.exon.5exon
CmaCh10G010850.1.exon.6CmaCh10G010850.1.exon.6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh10G010850.1.CDS.1CmaCh10G010850.1.CDS.1CDS
CmaCh10G010850.1.CDS.2CmaCh10G010850.1.CDS.2CDS
CmaCh10G010850.1.CDS.3CmaCh10G010850.1.CDS.3CDS
CmaCh10G010850.1.CDS.4CmaCh10G010850.1.CDS.4CDS
CmaCh10G010850.1.CDS.5CmaCh10G010850.1.CDS.5CDS
CmaCh10G010850.1.CDS.6CmaCh10G010850.1.CDS.6CDS


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000883Cytochrome c oxidase subunit IPANTHERPTHR10422CYTOCHROME C OXIDASE SUBUNIT 1coord: 9..262
score: 6.5
IPR000883Cytochrome c oxidase subunit IPFAMPF00115COX1coord: 43..144
score: 3.6
IPR023616Cytochrome c oxidase, subunit I domainGENE3DG3DSA:1.20.210.10coord: 82..217
score: 1.4E-35coord: 9..46
score: 2.7E-10coord: 47..77
score: 1.2
IPR023616Cytochrome c oxidase, subunit I domainPROFILEPS50855COX1coord: 1..203
score: 18
IPR023616Cytochrome c oxidase, subunit I domainunknownSSF81442Cytochrome c oxidase subunit I-likecoord: 9..203
score: 1.57
NoneNo IPR availablePANTHERPTHR10422:SF18CYTOCHROME C OXIDASE SUBUNIT 1coord: 9..262
score: 6.5