CmaCh10G010840.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G010840.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chloroplast ORF137
Location	Cma_Chr10 : 7114860 .. 7116303 (-)
Sequence length	645

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGAAGCTTCATTATTGCATTTCTTGTCATACTTATTTTGGGTTTTTTTCTACCAATTGGGGCCCTCCCTTCACCACCCTCATGGGGATGGTCTACAGGGTTCATAGCTACTCCTCTTACTACAGGACGCTTACCTAGCCAACATTTAGATCCGGCTCTACCCAAACTTTTCTGGTTTACCCCAGCATTCCCCACTTGTCCGACTGTTGCTGAGCAATTTTTGGATATCAAACGGACCTCCCCAGAAGGTAATTTTAATGTGGCCGATTTCCCCTCTTTTGCAATCAGTTTCGCTACAGCACTTGCTGCTCTAGCTAATTGTCCCCCCTTCCCAAGTGTGATTTCTATGTTATGTATGGCCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTCAAGTGTGATTTCTATGTTATGTATGGCCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTCTTTGTTTGTGGGATCATTTTCTCACGAGAGGTAATTAAAAGAAATTAAAAAATGGGGTTGTTACCGATGCCTAGATCTGGGATAAATGGAAATTTTATCGATAAGACCTTTTCAATTGTAGCCAATATCTTATTACGAATAATTCCGACAACTTCCGGGGAAAAAGAGGCATTCACCTATTACAGAGATGGTGCGATTTGATTTTTTTTTTTCTTTACCGCTCTCTGTCTTAGTAGAAAGACACAGTATTCGTGATAGAAAGAAAACAATATTCACTAGTAAAAATAGGTAGCAGAGGGGAAGAAGCACTACACCTAGGAATCAACAACACGAAAACTTTGTTATAAATTATCCCTTTTCCTCCAAATCAACTGTATTGTCGTGGAGAATTGTTTTTCTTACCTTACAAAAGAAAGTTCCAGTCTTTTATAGTTTTTTATTTTCTTTTTGGGTGGATGATTGGTTGAGAAAGACCAGAATTTATAGAGATATTATTGGTTAAATTTAGTCAATTGAGGTAAGATTGAGTTCCTAGTTTCCAAGTAGAATAACTCGAAGTAGTCTTAGTTTGTTTTCTTATTGTTTGTTTAGCTTTTGGGAAAGAAAAAGCTTTTCAATTGTTTTATTCATTATTTTATTTTACTCGTTCCTTTATTTTCTTTTAACCCTATTTATTAATGAATATTCTAGCAATAACGGAGAAACATTTCCTTGTCTTGAATATCCTCTAAGCTACTTACAAATCATCCAAGGCACATTAGCATGGCGTACGTGTTTGAATCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGTCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGATGGTCCGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAG

mRNA sequence

ATGACAGGAAGCTTCATTATTGCATTTCTTGTCATACTTATTTTGGGTTTTTTTCTACCAATTGGGGCCCTCCCTTCACCACCCTCATGGGGATGGTCTACAGGGTTCATAGCTACTCCTCTTACTACAGGACGCTTACCTAGCCAACATTTAGATCCGGCTCTACCCAAACTTTTCTGGTTTACCCCAGCATTCCCCACTTGTCCGACTGTTGCTGAGCAATTTTTGGATATCAAACGGACCTCCCCAGAAGGTAATTTTAATGTGGCCGATTTCCCCTCTTTTGCAATCAGTTTCGCTACAGCACTTGCTGCTCTAGCTAATTGTCCCCCCTTCCCAAGTGTGATTTCTATGTTATGTATGGCCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTCAAGTGTGATTTCTATGTTATGCACATTAGCATGGCGTACGTGTTTGAATCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGTCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGATGGTCCGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAG

Coding sequence (CDS)

ATGACAGGAAGCTTCATTATTGCATTTCTTGTCATACTTATTTTGGGTTTTTTTCTACCAATTGGGGCCCTCCCTTCACCACCCTCATGGGGATGGTCTACAGGGTTCATAGCTACTCCTCTTACTACAGGACGCTTACCTAGCCAACATTTAGATCCGGCTCTACCCAAACTTTTCTGGTTTACCCCAGCATTCCCCACTTGTCCGACTGTTGCTGAGCAATTTTTGGATATCAAACGGACCTCCCCAGAAGGTAATTTTAATGTGGCCGATTTCCCCTCTTTTGCAATCAGTTTCGCTACAGCACTTGCTGCTCTAGCTAATTGTCCCCCCTTCCCAAGTGTGATTTCTATGTTATGTATGGCCGTGCCTAAGGGCATATCGGTTGAAGTAGATTCTTCTTTCAAGTGTGATTTCTATGTTATGCACATTAGCATGGCGTACGTGTTTGAATCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGTCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGATGGTCCGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAG

Protein sequence

MTGSFIIAFLVILILGFFLPIGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSFKCDFYVMHISMAYVFESGFETKLLLRRIDGSIQVRSNVDPTFYSLVGSGWSGGTTSAPLFSRIHTSLISIWTAISRAQV

Homology

[Close]

BLAST of CmaCh10G010840.1 vs. Swiss-Prot
Match: YCF72_ORYSI (Uncharacterized protein ycf72 OS=Oryza sativa subsp. indica GN=ycf72-1 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-53
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. Swiss-Prot
Match: YCF72_ORYSA (Uncharacterized protein ycf72 OS=Oryza sativa GN=ycf72-1 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-53
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. Swiss-Prot
Match: YCF72_ORYNI (Uncharacterized protein ycf72 OS=Oryza nivara GN=ycf72-1 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-53
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. Swiss-Prot
Match: YCF72_ORYSJ (Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica GN=ycf72-1 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.6e-53
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. Swiss-Prot
Match: YCF72_SACOF (Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VA+ PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. TrEMBL
Match: T1L6Z5_TRIUA (Uncharacterized protein OS=Triticum urartu PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 102/120 (85.00%), Postives = 106/120 (88.33%), Query Frame = 1


Query: 16  GFFLPIGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQF 75
           GFFLP+GA PS P WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF
Sbjct: 40  GFFLPMGAFPSLPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQF 99

Query: 76  LDIKRTSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 135
            D KRTSP+GN  VAD PSFA+SFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 100 WDTKRTSPDGNLKVADLPSFAMSFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 159

[Close]

BLAST of CmaCh10G010840.1 vs. TrEMBL
Match: R4HGB9_9POAL (Orf137 OS=Pharus latifolius GN=orf137 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 101/115 (87.83%), Postives = 104/115 (90.43%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF DIKR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDIKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN NVAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLNVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. TrEMBL
Match: V9MG98_9POAL (Orf137 OS=Pharus lappulaceus GN=orf137 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 101/115 (87.83%), Postives = 104/115 (90.43%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF DIKR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDIKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN NVAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLNVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. TrEMBL
Match: I1QWE7_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. TrEMBL
Match: Q6Z512_ORYSJ (ORF137 OS=Oryza sativa subsp. japonica GN=OJ1585_D02.13 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. NCBI nr
Match: gi|511347615|ref|YP_008080537.1| (orf137 (chloroplast) [Pharus latifolius])

HSP 1 Score: 213.4 bits (542), Expect = 3.9e-52
Identity = 101/115 (87.83%), Postives = 104/115 (90.43%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF DIKR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDIKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN NVAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLNVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. NCBI nr
Match: gi|11466831|ref|NP_039428.1| (hypothetical protein OrsajCp070 [Oryza sativa Japonica Group])

HSP 1 Score: 209.1 bits (531), Expect = 7.4e-51
Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. NCBI nr
Match: gi|11467234|ref|NP_043067.1| (hypothetical protein ZemaCp066 (chloroplast) [Zea mays])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VA+ PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. NCBI nr
Match: gi|48478715|ref|YP_024322.1| (hypothetical protein 137 [Saccharum hybrid cultivar SP-80-3280])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VA+ PSFAISFATA AALANCPP P VISMLCMAVPKGISVEVDSSF
Sbjct: 61  TSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115

[Close]

BLAST of CmaCh10G010840.1 vs. NCBI nr
Match: gi|586929275|ref|YP_009002036.1| (orf137 (chloroplast) [Puelia olyriformis])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 98/115 (85.22%), Postives = 101/115 (87.83%), Query Frame = 1


Query: 21  IGALPSPPSWGWSTGFIATPLTTGRLPSQHLDPALPKLFWFTPAFPTCPTVAEQFLDIKR 80
           +GA PSPP WGWSTGFI TPLTTGRLPSQHLDPALPKLFWFTP  PTCPTVA+QF D KR
Sbjct: 1   MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR 60

Query: 81  TSPEGNFNVADFPSFAISFATALAALANCPPFPSVISMLCMAVPKGISVEVDSSF 136
           TSP+GN  VAD PSFAISFATA AALANCPP P VISMLCMAVP GISVEVDSSF
Sbjct: 61  TSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPNGISVEVDSSF 115

The following BLAST results are available for this feature:

BLAST of CmaCh10G010840.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YCF72_ORYSI	4.6e-53	86.09	Uncharacterized protein ycf72 OS=Oryza sativa subsp. indica GN=ycf72-1 PE=3 SV=1	[more]
YCF72_ORYSA	4.6e-53	86.09	Uncharacterized protein ycf72 OS=Oryza sativa GN=ycf72-1 PE=3 SV=1	[more]
YCF72_ORYNI	4.6e-53	86.09	Uncharacterized protein ycf72 OS=Oryza nivara GN=ycf72-1 PE=3 SV=1	[more]
YCF72_ORYSJ	4.6e-53	86.09	Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica GN=ycf72-1 PE=3 SV...	[more]
YCF72_SACOF	1.8e-52	85.22	Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1	[more]

BLAST of CmaCh10G010840.1 vs. TrEMBL


Match Name	E-value	Identity	Description
T1L6Z5_TRIUA	1.2e-52	85.00	Uncharacterized protein OS=Triticum urartu PE=4 SV=1	[more]
R4HGB9_9POAL	2.7e-52	87.83	Orf137 OS=Pharus latifolius GN=orf137 PE=4 SV=1	[more]
V9MG98_9POAL	2.7e-52	87.83	Orf137 OS=Pharus lappulaceus GN=orf137 PE=4 SV=1	[more]
I1QWE7_ORYGL	5.1e-51	86.09	Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1	[more]
Q6Z512_ORYSJ	5.1e-51	86.09	ORF137 OS=Oryza sativa subsp. japonica GN=OJ1585_D02.13 PE=4 SV=1	[more]

BLAST of CmaCh10G010840.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh10G010840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|511347615\|ref\|YP_008080537.1\|	3.9e-52	87.83	orf137 (chloroplast) [Pharus latifolius]	[more]
gi\|11466831\|ref\|NP_039428.1\|	7.4e-51	86.09	hypothetical protein OrsajCp070 [Oryza sativa Japonica Group]	[more]
gi\|11467234\|ref\|NP_043067.1\|	2.8e-50	85.22	hypothetical protein ZemaCp066 (chloroplast) [Zea mays]	[more]
gi\|48478715\|ref\|YP_024322.1\|	2.8e-50	85.22	hypothetical protein 137 [Saccharum hybrid cultivar SP-80-3280]	[more]
gi\|586929275\|ref\|YP_009002036.1\|	2.8e-50	85.22	orf137 (chloroplast) [Puelia olyriformis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR022546	Uncharacterised_Ycf68

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G010840	CmaCh10G010840	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G010840.1	CmaCh10G010840.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G010840.1.CDS.2	CmaCh10G010840.1.CDS.2	CDS
CmaCh10G010840.1.CDS.1	CmaCh10G010840.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G010840.1.exon.2	CmaCh10G010840.1.exon.2	exon
CmaCh10G010840.1.exon.1	CmaCh10G010840.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 156..213 score: 4.8
None	No IPR available	PRODOM	PD169947		coord: 165..188 score: 5.
None	No IPR available	PANTHER	PTHR37377	FAMILY NOT NAMED	coord: 22..163 score: 2.9