CmaCh10G008620.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G008620.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	E3 ubiquitin-protein ligase
Location	Cma_Chr10 : 4210661 .. 4211929 (-)
Sequence length	1269

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACTTGCAGTTCCTCCATATTTTATTTGCCCAATTTCCTTACAGATCATGAAAGATCCTGTTACTGCCACCACTGGTATTACTTATGATCGTGAGAGTATTGAGAATTGGTTTTTGACGTCTAAAGATGCAATCTTTTGCCCTCTAACCAAGCAGCCATTGACGAAAGCTTCCGACTTGACGCCGAACCACACGCTCCACCGCTTGATCAAGTCTTGGCTAGTTGAGAACGCTACCCCCGGTAGCGGATTCGATCGGATTCTAAGTCCTAGACCACTTTTAGACAAAACCCATCTCCGAAAACTCTTGCGGGATCTCACCGCCTCCGATGATGGGCTTCGCCACGACGCTGTGAGGAAGCTTTATGCTTTGGCTATTGAGGGTGACACGGCGTGTCGAGGTCGTATGGTGGAAGTTGGTGTCGCGAAAGGGATGGTTTTGTTTGTTATGAGATGTTTTAAGGAAGGGAAAGTTGGTGGGCTTGAGGAAGGTTTGAAGATTCTTAGTGTTCTAGAGAGTTATTCAATTTGTGAAACTAGGGTTCTTGATGTTATTGATTCTTTGAATTGGGTTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCATTGAAGTCTTGAAGAAAGCAATTGATGCAGCTCCCTCCACCGTTATCAGCGGCTACGAACTACGGTATCACGAGTTCGAATCCCGGTATCAAGGGTTCGAATCCCTCCAGTTCTTCAAAAACGTCACGAACCTCTTGAGAGAAAAGATCTCAAATTCAGCTCTCAAAACAACACTCACAATTCTAACAAAGTTATGCCATTGGGGAAGAAATCGAATCAAGCTCGTTGAAGTTGGGGCGGTTTTCAATTTGATTGCACTCGAGCTCGAGAAGCCAGAGAAGAATATAACTGAGCTCATCTTCAACCTCTTGGCTCATCTATGCACCACAGCGGACGGGAGAGCAGAGCTCGTCCGTCATGCCGGAGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTGTCTATTGCAACGACGGACCGTGCGATCCAAATTCTATCGTTGATATCAAAACACTCGGCGAGGAAGGATGTTCTTGTGGAAATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATGATGCAATCTGATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATATTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATTTGATGACTAGAGACCCTAGATAG

mRNA sequence

ATGGATGAACTTGCAGTTCCTCCATATTTTATTTGCCCAATTTCCTTACAGATCATGAAAGATCCTGTTACTGCCACCACTGGTATTACTTATGATCGTGAGAGTATTGAGAATTGGTTTTTGACGTCTAAAGATGCAATCTTTTGCCCTCTAACCAAGCAGCCATTGACGAAAGCTTCCGACTTGACGCCGAACCACACGCTCCACCGCTTGATCAAGTCTTGGCTAGTTGAGAACGCTACCCCCGGTAGCGGATTCGATCGGATTCTAAGTCCTAGACCACTTTTAGACAAAACCCATCTCCGAAAACTCTTGCGGGATCTCACCGCCTCCGATGATGGGCTTCGCCACGACGCTGTGAGGAAGCTTTATGCTTTGGCTATTGAGGGTGACACGGCGTGTCGAGGTCGTATGGTGGAAGTTGGTGTCGCGAAAGGGATGGTTTTGTTTGTTATGAGATGTTTTAAGGAAGGGAAAGTTGGTGGGCTTGAGGAAGGTTTGAAGATTCTTAGTGTTCTAGAGAGTTATTCAATTTGTGAAACTAGGGTTCTTGATGTTATTGATTCTTTGAATTGGGTTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCATTGAAGTCTTGAAGAAAGCAATTGATGCAGCTCCCTCCACCGTTATCAGCGGCTACGAACTACGGTATCACGAGTTCGAATCCCGGTATCAAGGGTTCGAATCCCTCCAGTTCTTCAAAAACGTCACGAACCTCTTGAGAGAAAAGATCTCAAATTCAGCTCTCAAAACAACACTCACAATTCTAACAAAGTTATGCCATTGGGGAAGAAATCGAATCAAGCTCGTTGAAGTTGGGGCGGTTTTCAATTTGATTGCACTCGAGCTCGAGAAGCCAGAGAAGAATATAACTGAGCTCATCTTCAACCTCTTGGCTCATCTATGCACCACAGCGGACGGGAGAGCAGAGCTCGTCCGTCATGCCGGAGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTGTCTATTGCAACGACGGACCGTGCGATCCAAATTCTATCGTTGATATCAAAACACTCGGCGAGGAAGGATGTTCTTGTGGAAATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATGATGCAATCTGATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATATTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATTTGATGACTAGAGACCCTAGATAG

Coding sequence (CDS)

ATGGATGAACTTGCAGTTCCTCCATATTTTATTTGCCCAATTTCCTTACAGATCATGAAAGATCCTGTTACTGCCACCACTGGTATTACTTATGATCGTGAGAGTATTGAGAATTGGTTTTTGACGTCTAAAGATGCAATCTTTTGCCCTCTAACCAAGCAGCCATTGACGAAAGCTTCCGACTTGACGCCGAACCACACGCTCCACCGCTTGATCAAGTCTTGGCTAGTTGAGAACGCTACCCCCGGTAGCGGATTCGATCGGATTCTAAGTCCTAGACCACTTTTAGACAAAACCCATCTCCGAAAACTCTTGCGGGATCTCACCGCCTCCGATGATGGGCTTCGCCACGACGCTGTGAGGAAGCTTTATGCTTTGGCTATTGAGGGTGACACGGCGTGTCGAGGTCGTATGGTGGAAGTTGGTGTCGCGAAAGGGATGGTTTTGTTTGTTATGAGATGTTTTAAGGAAGGGAAAGTTGGTGGGCTTGAGGAAGGTTTGAAGATTCTTAGTGTTCTAGAGAGTTATTCAATTTGTGAAACTAGGGTTCTTGATGTTATTGATTCTTTGAATTGGGTTTTGGGATTGGAGATGGAAAATCACATAATTATCAAAAGCTATGCCATTGAAGTCTTGAAGAAAGCAATTGATGCAGCTCCCTCCACCGTTATCAGCGGCTACGAACTACGGTATCACGAGTTCGAATCCCGGTATCAAGGGTTCGAATCCCTCCAGTTCTTCAAAAACGTCACGAACCTCTTGAGAGAAAAGATCTCAAATTCAGCTCTCAAAACAACACTCACAATTCTAACAAAGTTATGCCATTGGGGAAGAAATCGAATCAAGCTCGTTGAAGTTGGGGCGGTTTTCAATTTGATTGCACTCGAGCTCGAGAAGCCAGAGAAGAATATAACTGAGCTCATCTTCAACCTCTTGGCTCATCTATGCACCACAGCGGACGGGAGAGCAGAGCTCGTCCGTCATGCCGGAGGCATCGCGGTGGTTTCGAAGAGAATACTTAGGGTGTCTATTGCAACGACGGACCGTGCGATCCAAATTCTATCGTTGATATCAAAACACTCGGCGAGGAAGGATGTTCTTGTGGAAATGTTGAGGGTTGGGGCAGTGTCAAAGCTTTGCATGATGATGCAATCTGATTGTGAGGGATACTTGAAGGAGAAGGCTAGAGAGATATTGAGGATGCATTCAAATGTGTGGAGTAATTCTCCATGTATTGGGGTTTATTTGATGACTAGAGACCCTAGATAG

Protein sequence

MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAVRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTRDPR

Homology

[Close]

BLAST of CmaCh10G008620.1 vs. Swiss-Prot
Match: PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.0e-71
Identity = 181/458 (39.52%), Postives = 257/458 (56.11%), Query Frame = 1


Query: 2   DELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASD 61
           +E+ +P YFICPISL+IMKDPVT  +GITYDR++I  W    +    CP+TKQPL   SD
Sbjct: 6   EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPLPLDSD 65

Query: 62  LTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTA-SDDGL-RHDA 121
           LTPNH L RLI+ W VEN T   G  RI +PR    K ++ + +++L     + L R + 
Sbjct: 66  LTPNHMLRRLIQHWCVENET--RGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREET 125

Query: 122 VRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVG-----GLEEGLKILSVLE 181
           ++KL  LA++G+   R  M E GV K ++LFV++C  E + G     GL+E L++L ++ 
Sbjct: 126 LQKLEVLAMDGNN--RRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIG 185

Query: 182 SYSICETRVL----DVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELR 241
             S     +L     V++SL WVL  E     + K+Y I +L+   +   S ++      
Sbjct: 186 IPSNDAKTILMENDRVMESLTWVLHQE---DFLSKAYTIVLLRNLTEYTSSHIVERLNPE 245

Query: 242 YHEFESRYQGFESLQFFKNVTN-------LLREKISNS---------------------A 301
                  ++G   + F K+V N        +RE + +S                     A
Sbjct: 246 I------FKGI--IGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQA 305

Query: 302 LKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEKP-EKNITELIFNLLAHLCTTADG 361
           +   L IL +   W RNR  LV++GAV  LI LE+    EK ITEL+  +L+ LC  A+G
Sbjct: 306 VTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANG 365

Query: 362 RAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCM 420
           RAE++ H GGIAVV+KR+LRVS A  DRAI IL+ +SK S    V+ EM+ VG V KLC 
Sbjct: 366 RAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCS 425

[Close]

BLAST of CmaCh10G008620.1 vs. Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.9e-64
Identity = 151/420 (35.95%), Postives = 234/420 (55.71%), Query Frame = 1


Query: 2   DELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASD 61
           +E+ +PP+F+CPISL+IMKDPV  +TGITYDR+SIE W    K    CP+TKQ +T A D
Sbjct: 8   EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNS-CPVTKQDITDA-D 67

Query: 62  LTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAVR 121
           LTPNHTL RLI+SW   NA+   G +RI +PRP + K+ + KL+RD  +S +  +   ++
Sbjct: 68  LTPNHTLRRLIQSWCTLNAS--YGVERIPTPRPPICKSEIEKLIRDSASSHEN-QVKCLK 127

Query: 122 KLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICET 181
           +L  +  E  T  R  +   GV + +   V    + G +   +E L +L  LE+      
Sbjct: 128 RLRQIVSENATNKRC-LEAAGVPEFLANIVSNDSENGSL--TDEALNLLYHLETSETVLK 187

Query: 182 RVLD------VIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFE 241
            +L+      ++ SL  ++   M    +  +  ++ + +  D   S  +           
Sbjct: 188 NLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP--------- 247

Query: 242 SRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIAL 301
                    + F  V  +L ++IS  A K  + IL  +C WGRNR K VE G +  +I L
Sbjct: 248 ---------EVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIEL 307

Query: 302 ELEKP---EKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQ 361
            +++    E+   E+   +L  LC  A+GRAE + H   IAVV K+ILRVS   +DRA++
Sbjct: 308 LMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVR 367

Query: 362 ILSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCI 413
           +L  + +  A   +L EML++G V+KLC+++Q  C G  KEKA+E+L++H+ VW +SPC+
Sbjct: 368 VLLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401

[Close]

BLAST of CmaCh10G008620.1 vs. Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-31
Identity = 78/211 (36.97%), Postives = 122/211 (57.82%), Query Frame = 1


Query: 205 KSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQGFESLQFFKNVTNLLREKISNSALK 264
           ++YA  +LKK ++ A    I   E                + F  V  +L ++IS+ A +
Sbjct: 230 RAYAALLLKKLLEVADPMQIILLER---------------ELFGEVIQILHDQISHKATR 289

Query: 265 TTLTILTKLCHWGRNRIKLVEVGAVFNLIALELE---KPEKNITELIFNLLAHLCTTADG 324
           + + IL   C WGRNR K VE G +  +I L ++     E+  +E+   +L  LC  A+G
Sbjct: 290 SAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEG 349

Query: 325 RAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCM 384
           RAE + H   IAVVSK+ILRVS  T++RA+++L  + +  A   +L EML++G V+KLC+
Sbjct: 350 RAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCL 409

Query: 385 MMQSDCEGYLKEKAREILRMHSNVWSNSPCI 413
           ++Q  C    KEKA+E+L++H+ VW  SPC+
Sbjct: 410 VLQVSCGNKTKEKAKELLKLHARVWRESPCV 425

[Close]

BLAST of CmaCh10G008620.1 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.5e-28
Identity = 124/410 (30.24%), Postives = 192/410 (46.83%), Query Frame = 1


Query: 4   LAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLT 63
           + +P +F CPISL++M+DPVT  TG TYDR SIE+W     +   CP+T+ PL+  + L 
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPLSDFT-LI 71

Query: 64  PNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDD-----GLRHD 123
           PNHTL RLI+ W V N +  +G +RI +P+   D T +R LL   +A          R  
Sbjct: 72  PNHTLRRLIQEWCVANRS--NGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAA 131

Query: 124 AVRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGL-EEGLKILSVLESYS 183
           A+R+L   A + D       V +       + +   F E     L  E L +L +L    
Sbjct: 132 ALRRLRGFARDSDK----NRVLIAAHNATEILIKILFSETTSSELVSESLALLVML---P 191

Query: 184 ICETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESR 243
           I E      I S      +E    ++  S     ++  ++AA    I     +  + +  
Sbjct: 192 ITEPNQFVSISSDPG--RVEFLTRLLFDS----SIETRVNAAALIEIVSTGTKSADLKGS 251

Query: 244 YQGFESLQFFKNVTNLLREKISN-SALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALE 303
               ES+  F+ V +LLR  IS+  ALK  +  L  LC     R   +  GA   LI   
Sbjct: 252 ISNSESV--FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL 311

Query: 304 LEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSL 363
               ++  TE     +  LC T +G A    HA  + ++ K ILRVS   T+ A    +L
Sbjct: 312 AADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG--AL 371

Query: 364 ISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVW 407
           ++  +A +    E    G V +L +M+QS+C    K+KA+++L++  + W
Sbjct: 372 LALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CmaCh10G008620.1 vs. Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.6e-27
Identity = 122/426 (28.64%), Postives = 198/426 (46.48%), Query Frame = 1


Query: 4   LAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLT 63
           + +P +F CPISL +M DPVT +TG TYDR SI++W         CP+T+  L+  + L 
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVALSDFT-LI 71

Query: 64  PNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDD-----GLRHD 123
           PNHTL RLI+ W V N +  +G +RI +P+   D   +R LL   +A          R  
Sbjct: 72  PNHTLRRLIQEWCVANRS--NGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAA 131

Query: 124 AVRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGL-----EEGLKILSVL 183
           A+R+L  LA + +   + R++  G      + V   F + +   L      E L +L +L
Sbjct: 132 AIRRLRGLARDSE---KNRVLIAG-HNAREILVRILFADIETTSLSSELVSESLALLVLL 191

Query: 184 E-SYSICETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPS----TVISGYE 243
             + + CE    D    + ++  L  ++ I I+  A  +++  +  A S     +ISG  
Sbjct: 192 HMTETECEAVASDP-SRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISG-- 251

Query: 244 LRYHEFESRYQGFESLQFFKNVTNLLREKISN-SALKTTLTILTKLCHWGRNRIKLVEVG 303
                         S   F+ V +LL+  IS+  ALK  +  +  LC   + R   +  G
Sbjct: 252 --------------SDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAG 311

Query: 304 AVFNLIALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATT 363
           A   LI       ++  TE     +  LC   +G A    HA  + ++ K ILRVS   T
Sbjct: 312 APGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRAT 371

Query: 364 DRAI-QILSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVW 413
           + A   +L+L +     +D   E    G V++L +++QSDC    K KA+ +L++  + W
Sbjct: 372 EYAAGALLALCTAEERCRD---EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 408

[Close]

BLAST of CmaCh10G008620.1 vs. TrEMBL
Match: A0A0A0M309_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633420 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 7.5e-187
Identity = 342/423 (80.85%), Postives = 376/423 (88.89%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKD-AIFCPLTKQPLTKA 60
           M+E AVPPYFICPISLQIMKDPVTATTGITYDRESI+NWFLTSKD AIFCPLTKQ LTKA
Sbjct: 1   MEEAAVPPYFICPISLQIMKDPVTATTGITYDRESIQNWFLTSKDDAIFCPLTKQSLTKA 60

Query: 61  SDLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDA 120
           SDLTPNHTL RLIKSW+VENA+   G D+IL+PRPLLDKT LRK+LR++ ASD+ LR D+
Sbjct: 61  SDLTPNHTLRRLIKSWMVENASSAGGDDQILTPRPLLDKTCLRKILREVAASDERLRIDS 120

Query: 121 VRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSIC 180
           V+KL+ALAIE DTA RGRM EVGVAKGMVLFV+R F+EG+VGGLEE LKILS+L  YSI 
Sbjct: 121 VKKLHALAIESDTANRGRMEEVGVAKGMVLFVIRRFREGRVGGLEEALKILSLLSHYSIS 180

Query: 181 ETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQ 240
           ETRVLD  +SL WVLGLEMENHIIIKSYAIEVLKKA D APST+++              
Sbjct: 181 ETRVLDFFESLTWVLGLEMENHIIIKSYAIEVLKKATDVAPSTILTQI------------ 240

Query: 241 GFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEK 300
              +++FFKN+TNLLREKISNS+LKTTLTILT +C  GRNR+KLVEVGAVF+LIALELEK
Sbjct: 241 ---NIEFFKNITNLLREKISNSSLKTTLTILTNICPCGRNRVKLVEVGAVFDLIALELEK 300

Query: 301 PEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360
           PEK  TELIFNLLAHLC+TADGRAEL+RHAGGIAVVSKRILRVSIATTDRAIQILSLISK
Sbjct: 301 PEKKTTELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360

Query: 361 HSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTR 420
           HSARKDVL+EMLRVGAVSKLCMMMQS+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTR
Sbjct: 361 HSARKDVLLEMLRVGAVSKLCMMMQSNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTR 408

Query: 421 DPR 423
           DPR
Sbjct: 421 DPR 408

[Close]

BLAST of CmaCh10G008620.1 vs. TrEMBL
Match: B9HQ77_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02140g PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.8e-115
Identity = 227/428 (53.04%), Postives = 302/428 (70.56%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MDE+ VP YF+CPISLQI+KDPVT  TGITY+RESIE W   +K    CP+TKQ L + S
Sbjct: 1   MDEIEVPEYFLCPISLQILKDPVTTITGITYERESIEQWLKAAKSNPTCPVTKQSLPRDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           +LTPNHTL RLI+SW   NA    G DRI +P+  + K+ + +L++DL A DD LR  A+
Sbjct: 61  ELTPNHTLRRLIQSWCTVNAI--YGVDRIPTPKSPIKKSQIFRLIKDLDAPDDHLRTKAL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           R++ ALA E +   R  MVE GV K  VLF+++CFKEGK  GLEE L+IL ++ + S  E
Sbjct: 121 RRMEALAKENERN-RTCMVEAGVTKAAVLFIIKCFKEGKTAGLEEVLRILYLIWNPSQ-E 180

Query: 181 TRVL-----DVIDSLNWVLGLE-MENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEF 240
            ++L     D IDSL W+L  + + NH+ +KS+A+ +L K  +     ++   ++     
Sbjct: 181 IKLLVRENQDFIDSLTWILRCDQINNHVDVKSHAMLLLHKTTEIVCQKLLESLKV----- 240

Query: 241 ESRYQGFESLQFFKNV-TNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLI 300
                      FFK + T +LR++IS  A+K++L +LT++CHWGRNR+K+VE  AVF LI
Sbjct: 241 ----------DFFKEIITRVLRKRISKQAVKSSLLVLTEVCHWGRNRMKIVEANAVFELI 300

Query: 301 ALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQI 360
            LELEKPEKNITELIFN+LA LC+ ADGR + ++HAG IA++SKR+LRVS AT DRA+ I
Sbjct: 301 ELELEKPEKNITELIFNILAQLCSCADGREQFLKHAGSIAMISKRVLRVSPATDDRALHI 360

Query: 361 LSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIG 420
           L  ISK SA  +  +EMLRVGAVSKLCM++Q+DC  YLK+KAR ILR+HS++W+NSPCI 
Sbjct: 361 LDSISKFSASDEAALEMLRVGAVSKLCMVIQADCAPYLKKKARGILRLHSHMWNNSPCIA 409

Query: 421 VYLMTRDP 422
           VYL+TR P
Sbjct: 421 VYLLTRYP 409

[Close]

BLAST of CmaCh10G008620.1 vs. TrEMBL
Match: A0A061GVU0_THECC (Plant U-box 24, putative OS=Theobroma cacao GN=TCM_041223 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 8.4e-114
Identity = 222/427 (51.99%), Postives = 301/427 (70.49%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MDE+ +P YF+CPISLQIMKDPVTA TGITYDRESIE W   + D   CP+TKQPL   S
Sbjct: 1   MDEIDIPQYFLCPISLQIMKDPVTAVTGITYDRESIEQWLKIATDTT-CPVTKQPLPSDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           DLTPNHTL RLI++W  EN +  +G DRI +P+  L K+ + KL+R+   +   +  +A+
Sbjct: 61  DLTPNHTLRRLIQAWCTENES--NGIDRIPTPKSPLSKSRVIKLMREFEHTSFYV--NAL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           +K+ AL  E +   R  M E GVAK ++L + RC+KE ++ GLEE L+++ ++ + S  E
Sbjct: 121 KKMEALGKENEKN-RKCMEEAGVAKAVILLLRRCYKERRITGLEEALRLVYLIWTPS-SE 180

Query: 181 TRVL-----DVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFE 240
            + L     D+ID L W+LG EMEN +++K++ + VL+K I+ A + ++   +       
Sbjct: 181 VKALVNENHDLIDCLTWILGCEMENPVVVKTHTMLVLRKVIEVANTRLVEKLK------- 240

Query: 241 SRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIAL 300
                   L+FFK +  +L+ KIS  A K+ L I+ ++C WGRN+ K+VE  A+F LI  
Sbjct: 241 --------LEFFKEILRVLKLKISQQATKSALLIMIEVCLWGRNKSKIVEANAIFELIEF 300

Query: 301 ELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILS 360
           EL+ PEKNITEL  NLLAHLC+ ADGRA+ +RHAG IA+V+KRILRVS AT D+A+ ILS
Sbjct: 301 ELQNPEKNITELNINLLAHLCSCADGRAQFLRHAGSIAMVAKRILRVSPATDDQAVHILS 360

Query: 361 LISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVY 420
           LISK+SA K VL+EMLRVGAV+KLCM++Q+DC  YLKEKAR +LR+HSN+W+NSPCI VY
Sbjct: 361 LISKYSATKQVLLEMLRVGAVTKLCMVIQADCAAYLKEKARGVLRLHSNLWNNSPCIAVY 405

Query: 421 LMTRDPR 423
           L+TR  R
Sbjct: 421 LLTRYQR 405

[Close]

BLAST of CmaCh10G008620.1 vs. TrEMBL
Match: F6HAE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00370 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.2e-113
Identity = 218/427 (51.05%), Postives = 298/427 (69.79%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MD++ +P YF+CPISLQIMKDPVTA TGITYDRESIE W LT+KD   CP+TKQPL +  
Sbjct: 1   MDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTT-CPVTKQPLERDF 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
            LTPNHTL RLI++W  +NAT  +G DRI +P+  LD+TH+ KL+RDL  +   L+   +
Sbjct: 61  VLTPNHTLRRLIQAWCADNAT--NGVDRIPTPKTPLDRTHVVKLIRDLGVAQLYLK--TL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           +K+ AL  + +   R  M + G AK +VL +++CFKE K  G+EEGL+IL ++ S +  E
Sbjct: 121 QKMEALTRDNERN-RNCMADAGAAKAIVLLIIKCFKENKTTGVEEGLRILHLIWSPT-SE 180

Query: 181 TRVL-----DVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFE 240
            ++L     D +D++ W LG E +N++ ++S A+ VLK  ++ A   ++   +       
Sbjct: 181 MKLLLKENYDFVDAVTWALGCETDNYVAVRSNAVLVLKNIVEVASPNLLERLKF------ 240

Query: 241 SRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIAL 300
                    +F   +   +REKIS +A+K  L +L ++C WGRN+ +++E GAVF LI +
Sbjct: 241 ---------EFLNRLIRTMREKISQAAMKAALYVLMEVCPWGRNKWQMIEAGAVFQLIEM 300

Query: 301 ELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILS 360
           ELE PEK ITE+IF LL HLC+ ADGRA+ + HAG +A++SKRILRVS  T DRA+ I++
Sbjct: 301 ELENPEKKITEIIFCLLGHLCSCADGRAQFLAHAGSMAMLSKRILRVSNTTDDRALHIIA 360

Query: 361 LISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVY 420
           LISK S   +VL+EMLRVGAVSKLCM++Q+DC  YLKEKAREILR+HS VW+NSPCI VY
Sbjct: 361 LISKFSGTNEVLMEMLRVGAVSKLCMVLQADCAKYLKEKAREILRLHSKVWNNSPCIAVY 405

Query: 421 LMTRDPR 423
           L+TR  R
Sbjct: 421 LLTRYAR 405

[Close]

BLAST of CmaCh10G008620.1 vs. TrEMBL
Match: A0A067KML0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13635 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.9e-111
Identity = 224/426 (52.58%), Postives = 290/426 (68.08%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MD++ +P Y++CPISLQIMKDPVT  TGITYDRESIE W  T+K+   CP+TKQPL K S
Sbjct: 1   MDDIEIPEYYLCPISLQIMKDPVTTVTGITYDRESIEQWLKTAKNGSTCPVTKQPLPKDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           DLTPNH L RLI++W   NA   +G   I +P+  L K +  KL++DL      L   A+
Sbjct: 61  DLTPNHMLRRLIQAWCTSNAK--NGVSPIPTPKSPLSKNYFLKLVKDLEIHT--LFIQAL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSV---LESYS 180
            K+ ALA+E +   R  MV+VGV K +V F++RC+KE K  GLE+ L+IL V   LE+  
Sbjct: 121 NKMEALALENERN-RMCMVDVGVDKALVSFILRCYKERKTIGLEQALRILDVTWDLEAIK 180

Query: 181 ICETRVLDVIDSLNWVLGLEMENHII---IKSYAIEVLKKAIDAAPSTVISGYELRYHEF 240
           +      D +DSL WV G +++N  I   IK+ ++ VLKK +    + ++          
Sbjct: 181 VHVKDNRDFVDSLIWVSGFDVDNDNIDVNIKTQSMSVLKKTMQVGSTDLLERL------- 240

Query: 241 ESRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIA 300
                   S  FF+ +  LL+EKIS  ALK+ L +L ++C WGRNR+K+VE  AVF LI 
Sbjct: 241 --------SHDFFRGIVKLLKEKISQKALKSALLVLLEVCPWGRNRMKIVEAKAVFELIE 300

Query: 301 LELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQIL 360
           LEL KPEKNITELIFNLLA LC  ADGR + ++HAG IA++SKRILRVS AT DRA+ IL
Sbjct: 301 LELGKPEKNITELIFNLLAELCCCADGRDQFLKHAGSIAMISKRILRVSPATDDRAVHIL 360

Query: 361 SLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGV 420
            L+SK SA   +L+EMLRVGAVSKLCM++Q++C  YLK+KAR ILR+HS VW+NSPCI V
Sbjct: 361 GLVSKFSANDQLLLEMLRVGAVSKLCMVIQANCAAYLKQKARGILRLHSKVWNNSPCIHV 406

[Close]

BLAST of CmaCh10G008620.1 vs. TAIR10
Match: AT3G11840.1 (AT3G11840.1 plant U-box 24)

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-72
Identity = 181/458 (39.52%), Postives = 257/458 (56.11%), Query Frame = 1


Query: 2   DELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASD 61
           +E+ +P YFICPISL+IMKDPVT  +GITYDR++I  W    +    CP+TKQPL   SD
Sbjct: 20  EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL---EKVPSCPVTKQPLPLDSD 79

Query: 62  LTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTA-SDDGL-RHDA 121
           LTPNH L RLI+ W VEN T   G  RI +PR    K ++ + +++L     + L R + 
Sbjct: 80  LTPNHMLRRLIQHWCVENET--RGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREET 139

Query: 122 VRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVG-----GLEEGLKILSVLE 181
           ++KL  LA++G+   R  M E GV K ++LFV++C  E + G     GL+E L++L ++ 
Sbjct: 140 LQKLEVLAMDGNN--RRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIG 199

Query: 182 SYSICETRVL----DVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELR 241
             S     +L     V++SL WVL  E     + K+Y I +L+   +   S ++      
Sbjct: 200 IPSNDAKTILMENDRVMESLTWVLHQE---DFLSKAYTIVLLRNLTEYTSSHIVERLNPE 259

Query: 242 YHEFESRYQGFESLQFFKNVTN-------LLREKISNS---------------------A 301
                  ++G   + F K+V N        +RE + +S                     A
Sbjct: 260 I------FKGI--IGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQA 319

Query: 302 LKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEKP-EKNITELIFNLLAHLCTTADG 361
           +   L IL +   W RNR  LV++GAV  LI LE+    EK ITEL+  +L+ LC  A+G
Sbjct: 320 VTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANG 379

Query: 362 RAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCM 420
           RAE++ H GGIAVV+KR+LRVS A  DRAI IL+ +SK S    V+ EM+ VG V KLC 
Sbjct: 380 RAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCS 439

[Close]

BLAST of CmaCh10G008620.1 vs. TAIR10
Match: AT2G35930.1 (AT2G35930.1 plant U-box 23)

HSP 1 Score: 246.9 bits (629), Expect = 2.2e-65
Identity = 151/420 (35.95%), Postives = 234/420 (55.71%), Query Frame = 1


Query: 2   DELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASD 61
           +E+ +PP+F+CPISL+IMKDPV  +TGITYDR+SIE W    K    CP+TKQ +T A D
Sbjct: 8   EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNS-CPVTKQDITDA-D 67

Query: 62  LTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAVR 121
           LTPNHTL RLI+SW   NA+   G +RI +PRP + K+ + KL+RD  +S +  +   ++
Sbjct: 68  LTPNHTLRRLIQSWCTLNAS--YGVERIPTPRPPICKSEIEKLIRDSASSHEN-QVKCLK 127

Query: 122 KLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICET 181
           +L  +  E  T  R  +   GV + +   V    + G +   +E L +L  LE+      
Sbjct: 128 RLRQIVSENATNKRC-LEAAGVPEFLANIVSNDSENGSL--TDEALNLLYHLETSETVLK 187

Query: 182 RVLD------VIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFE 241
            +L+      ++ SL  ++   M    +  +  ++ + +  D   S  +           
Sbjct: 188 NLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP--------- 247

Query: 242 SRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIAL 301
                    + F  V  +L ++IS  A K  + IL  +C WGRNR K VE G +  +I L
Sbjct: 248 ---------EVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIEL 307

Query: 302 ELEKP---EKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQ 361
            +++    E+   E+   +L  LC  A+GRAE + H   IAVV K+ILRVS   +DRA++
Sbjct: 308 LMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVR 367

Query: 362 ILSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCI 413
           +L  + +  A   +L EML++G V+KLC+++Q  C G  KEKA+E+L++H+ VW +SPC+
Sbjct: 368 VLLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401

[Close]

BLAST of CmaCh10G008620.1 vs. TAIR10
Match: AT3G52450.1 (AT3G52450.1 plant U-box 22)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32
Identity = 78/211 (36.97%), Postives = 122/211 (57.82%), Query Frame = 1


Query: 205 KSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQGFESLQFFKNVTNLLREKISNSALK 264
           ++YA  +LKK ++ A    I   E                + F  V  +L ++IS+ A +
Sbjct: 230 RAYAALLLKKLLEVADPMQIILLER---------------ELFGEVIQILHDQISHKATR 289

Query: 265 TTLTILTKLCHWGRNRIKLVEVGAVFNLIALELE---KPEKNITELIFNLLAHLCTTADG 324
           + + IL   C WGRNR K VE G +  +I L ++     E+  +E+   +L  LC  A+G
Sbjct: 290 SAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEG 349

Query: 325 RAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISKHSARKDVLVEMLRVGAVSKLCM 384
           RAE + H   IAVVSK+ILRVS  T++RA+++L  + +  A   +L EML++G V+KLC+
Sbjct: 350 RAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCL 409

Query: 385 MMQSDCEGYLKEKAREILRMHSNVWSNSPCI 413
           ++Q  C    KEKA+E+L++H+ VW  SPC+
Sbjct: 410 VLQVSCGNKTKEKAKELLKLHARVWRESPCV 425

[Close]

BLAST of CmaCh10G008620.1 vs. TAIR10
Match: AT3G19380.1 (AT3G19380.1 plant U-box 25)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-29
Identity = 124/410 (30.24%), Postives = 192/410 (46.83%), Query Frame = 1


Query: 4   LAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLT 63
           + +P +F CPISL++M+DPVT  TG TYDR SIE+W     +   CP+T+ PL+  + L 
Sbjct: 12  IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTT-CPVTRAPLSDFT-LI 71

Query: 64  PNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDD-----GLRHD 123
           PNHTL RLI+ W V N +  +G +RI +P+   D T +R LL   +A          R  
Sbjct: 72  PNHTLRRLIQEWCVANRS--NGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAA 131

Query: 124 AVRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGL-EEGLKILSVLESYS 183
           A+R+L   A + D       V +       + +   F E     L  E L +L +L    
Sbjct: 132 ALRRLRGFARDSDK----NRVLIAAHNATEILIKILFSETTSSELVSESLALLVML---P 191

Query: 184 ICETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESR 243
           I E      I S      +E    ++  S     ++  ++AA    I     +  + +  
Sbjct: 192 ITEPNQFVSISSDPG--RVEFLTRLLFDS----SIETRVNAAALIEIVSTGTKSADLKGS 251

Query: 244 YQGFESLQFFKNVTNLLREKISN-SALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALE 303
               ES+  F+ V +LLR  IS+  ALK  +  L  LC     R   +  GA   LI   
Sbjct: 252 ISNSESV--FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL 311

Query: 304 LEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSL 363
               ++  TE     +  LC T +G A    HA  + ++ K ILRVS   T+ A    +L
Sbjct: 312 AADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG--AL 371

Query: 364 ISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVW 407
           ++  +A +    E    G V +L +M+QS+C    K+KA+++L++  + W
Sbjct: 372 LALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CmaCh10G008620.1 vs. TAIR10
Match: AT1G49780.1 (AT1G49780.1 plant U-box 26)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-28
Identity = 122/426 (28.64%), Postives = 198/426 (46.48%), Query Frame = 1


Query: 4   LAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKASDLT 63
           + +P +F CPISL +M DPVT +TG TYDR SI++W         CP+T+  L+  + L 
Sbjct: 12  IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT--CPVTRVALSDFT-LI 71

Query: 64  PNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDD-----GLRHD 123
           PNHTL RLI+ W V N +  +G +RI +P+   D   +R LL   +A          R  
Sbjct: 72  PNHTLRRLIQEWCVANRS--NGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAA 131

Query: 124 AVRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGL-----EEGLKILSVL 183
           A+R+L  LA + +   + R++  G      + V   F + +   L      E L +L +L
Sbjct: 132 AIRRLRGLARDSE---KNRVLIAG-HNAREILVRILFADIETTSLSSELVSESLALLVLL 191

Query: 184 E-SYSICETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPS----TVISGYE 243
             + + CE    D    + ++  L  ++ I I+  A  +++  +  A S     +ISG  
Sbjct: 192 HMTETECEAVASDP-SRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISG-- 251

Query: 244 LRYHEFESRYQGFESLQFFKNVTNLLREKISN-SALKTTLTILTKLCHWGRNRIKLVEVG 303
                         S   F+ V +LL+  IS+  ALK  +  +  LC   + R   +  G
Sbjct: 252 --------------SDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAG 311

Query: 304 AVFNLIALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATT 363
           A   LI       ++  TE     +  LC   +G A    HA  + ++ K ILRVS   T
Sbjct: 312 APGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRAT 371

Query: 364 DRAI-QILSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVW 413
           + A   +L+L +     +D   E    G V++L +++QSDC    K KA+ +L++  + W
Sbjct: 372 EYAAGALLALCTAEERCRD---EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 408

[Close]

BLAST of CmaCh10G008620.1 vs. NCBI nr
Match: gi|449442749|ref|XP_004139143.1| (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus])

HSP 1 Score: 661.4 bits (1705), Expect = 1.1e-186
Identity = 342/423 (80.85%), Postives = 376/423 (88.89%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKD-AIFCPLTKQPLTKA 60
           M+E AVPPYFICPISLQIMKDPVTATTGITYDRESI+NWFLTSKD AIFCPLTKQ LTKA
Sbjct: 1   MEEAAVPPYFICPISLQIMKDPVTATTGITYDRESIQNWFLTSKDDAIFCPLTKQSLTKA 60

Query: 61  SDLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDA 120
           SDLTPNHTL RLIKSW+VENA+   G D+IL+PRPLLDKT LRK+LR++ ASD+ LR D+
Sbjct: 61  SDLTPNHTLRRLIKSWMVENASSAGGDDQILTPRPLLDKTCLRKILREVAASDERLRIDS 120

Query: 121 VRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSIC 180
           V+KL+ALAIE DTA RGRM EVGVAKGMVLFV+R F+EG+VGGLEE LKILS+L  YSI 
Sbjct: 121 VKKLHALAIESDTANRGRMEEVGVAKGMVLFVIRRFREGRVGGLEEALKILSLLSHYSIS 180

Query: 181 ETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQ 240
           ETRVLD  +SL WVLGLEMENHIIIKSYAIEVLKKA D APST+++              
Sbjct: 181 ETRVLDFFESLTWVLGLEMENHIIIKSYAIEVLKKATDVAPSTILTQI------------ 240

Query: 241 GFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEK 300
              +++FFKN+TNLLREKISNS+LKTTLTILT +C  GRNR+KLVEVGAVF+LIALELEK
Sbjct: 241 ---NIEFFKNITNLLREKISNSSLKTTLTILTNICPCGRNRVKLVEVGAVFDLIALELEK 300

Query: 301 PEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360
           PEK  TELIFNLLAHLC+TADGRAEL+RHAGGIAVVSKRILRVSIATTDRAIQILSLISK
Sbjct: 301 PEKKTTELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360

Query: 361 HSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTR 420
           HSARKDVL+EMLRVGAVSKLCMMMQS+CEGYLKEKAREILRMHSNVWSNSPCIGVY+MTR
Sbjct: 361 HSARKDVLLEMLRVGAVSKLCMMMQSNCEGYLKEKAREILRMHSNVWSNSPCIGVYVMTR 408

Query: 421 DPR 423
           DPR
Sbjct: 421 DPR 408

[Close]

BLAST of CmaCh10G008620.1 vs. NCBI nr
Match: gi|659099174|ref|XP_008450468.1| (PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Cucumis melo])

HSP 1 Score: 657.9 bits (1696), Expect = 1.2e-185
Identity = 337/423 (79.67%), Postives = 372/423 (87.94%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           M+E+AVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQ LTKAS
Sbjct: 1   MEEVAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQSLTKAS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLT-ASDDGLRHDA 120
           DLTPNHTL RLIKSW+VENA+PG G D  L+P PLLDKT LRKLLR++  ASD+ LR DA
Sbjct: 61  DLTPNHTLRRLIKSWMVENASPGGGDDEFLTPSPLLDKTRLRKLLREVAVASDERLRIDA 120

Query: 121 VRKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSIC 180
           V+KL+ALAIE DTA RGRM EVGVAKGMVLFV+R F+EG++GGLEE LKILS+L  YSI 
Sbjct: 121 VKKLHALAIESDTASRGRMEEVGVAKGMVLFVIRRFREGRIGGLEEALKILSLLSHYSIS 180

Query: 181 ETRVLDVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFESRYQ 240
           E R L+  +SL WVLGLEMENH IIKSYAIEVLKKA D APST+++              
Sbjct: 181 EIRFLEFFESLTWVLGLEMENHTIIKSYAIEVLKKATDVAPSTILTQI------------ 240

Query: 241 GFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIALELEK 300
              +L+FFKN+TNL REKISNS+LKTTLT+L  +C WGRNR+KLVEVGAVF+LI LELEK
Sbjct: 241 ---NLEFFKNITNLFREKISNSSLKTTLTMLINICPWGRNRVKLVEVGAVFDLIELELEK 300

Query: 301 PEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360
           PEKNITELIFNLLAHLC+TADGRAEL+ HAGGIAVVSKRILRVSIATTDRAIQILSLISK
Sbjct: 301 PEKNITELIFNLLAHLCSTADGRAELISHAGGIAVVSKRILRVSIATTDRAIQILSLISK 360

Query: 361 HSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVYLMTR 420
           HSARKDVL+EMLRVGAVSKLCM+MQS+CEG+LKEKAREILRMHSNVWSNSPCIGVY+MTR
Sbjct: 361 HSARKDVLLEMLRVGAVSKLCMIMQSNCEGFLKEKAREILRMHSNVWSNSPCIGVYVMTR 408

Query: 421 DPR 423
           DPR
Sbjct: 421 DPR 408

[Close]

BLAST of CmaCh10G008620.1 vs. NCBI nr
Match: gi|743929230|ref|XP_011008842.1| (PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Populus euphratica])

HSP 1 Score: 424.5 bits (1090), Expect = 2.2e-115
Identity = 228/428 (53.27%), Postives = 304/428 (71.03%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MDE+ VP YF+CPISLQI+KDPVT  TGITY+RESIE W   +K    CP+TKQ L + S
Sbjct: 1   MDEIEVPEYFLCPISLQILKDPVTTITGITYERESIEQWLKAAKSNATCPVTKQSLPRDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           +LTPNHTL RLI+SW   NA    G DRI +P+  + K+ + +LL+DL A DD LR  AV
Sbjct: 61  ELTPNHTLRRLIQSWCTVNAI--CGVDRIPTPKSPIKKSQIFRLLKDLDAPDDHLRTKAV 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           R++ ALA E +   R  MVE GV K  VLF+++CFKEGK  GLEE L+IL ++ + S  E
Sbjct: 121 RRMEALAKENERN-RTCMVEAGVTKAAVLFIIKCFKEGKTAGLEEILRILYLIWNPSQ-E 180

Query: 181 TRVL-----DVIDSLNWVLGLE-MENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEF 240
            ++L     D IDSL W+L  + ++NH+ +K++A+ +L K  +     ++          
Sbjct: 181 IKLLVRENQDFIDSLTWILSCDQIDNHVAVKTHAMLLLHKTTEIVCQKLL---------- 240

Query: 241 ESRYQGFESLQFFKNV-TNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLI 300
                G   + FFK + T +LR++IS  A+K++L +L ++C WGRNR+K+VE  AVF LI
Sbjct: 241 -----GSLKVDFFKEIITRVLRKRISKQAIKSSLLVLAEVCPWGRNRMKIVEANAVFELI 300

Query: 301 ALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQI 360
            LELEKPEKNITELIFN+LA LC+ ADGR + ++HAG IA++SKR+LRVS AT DRA++I
Sbjct: 301 ELELEKPEKNITELIFNILAQLCSCADGRQQFLKHAGSIAMLSKRVLRVSPATDDRAVRI 360

Query: 361 LSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIG 420
           L  ISK SA  + ++EMLRVGAVSKLCM++Q+DC  YLK+KAREILR+HS++W+NSPCI 
Sbjct: 361 LDSISKFSAGDEAVLEMLRVGAVSKLCMVIQADCAPYLKKKAREILRLHSHMWNNSPCIA 409

Query: 421 VYLMTRDP 422
           VYL+TR P
Sbjct: 421 VYLLTRYP 409

[Close]

BLAST of CmaCh10G008620.1 vs. NCBI nr
Match: gi|224106714|ref|XP_002314258.1| (hypothetical protein POPTR_0009s02140g [Populus trichocarpa])

HSP 1 Score: 422.5 bits (1085), Expect = 8.4e-115
Identity = 227/428 (53.04%), Postives = 302/428 (70.56%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MDE+ VP YF+CPISLQI+KDPVT  TGITY+RESIE W   +K    CP+TKQ L + S
Sbjct: 1   MDEIEVPEYFLCPISLQILKDPVTTITGITYERESIEQWLKAAKSNPTCPVTKQSLPRDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           +LTPNHTL RLI+SW   NA    G DRI +P+  + K+ + +L++DL A DD LR  A+
Sbjct: 61  ELTPNHTLRRLIQSWCTVNAI--YGVDRIPTPKSPIKKSQIFRLIKDLDAPDDHLRTKAL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           R++ ALA E +   R  MVE GV K  VLF+++CFKEGK  GLEE L+IL ++ + S  E
Sbjct: 121 RRMEALAKENERN-RTCMVEAGVTKAAVLFIIKCFKEGKTAGLEEVLRILYLIWNPSQ-E 180

Query: 181 TRVL-----DVIDSLNWVLGLE-MENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEF 240
            ++L     D IDSL W+L  + + NH+ +KS+A+ +L K  +     ++   ++     
Sbjct: 181 IKLLVRENQDFIDSLTWILRCDQINNHVDVKSHAMLLLHKTTEIVCQKLLESLKV----- 240

Query: 241 ESRYQGFESLQFFKNV-TNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLI 300
                      FFK + T +LR++IS  A+K++L +LT++CHWGRNR+K+VE  AVF LI
Sbjct: 241 ----------DFFKEIITRVLRKRISKQAVKSSLLVLTEVCHWGRNRMKIVEANAVFELI 300

Query: 301 ALELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQI 360
            LELEKPEKNITELIFN+LA LC+ ADGR + ++HAG IA++SKR+LRVS AT DRA+ I
Sbjct: 301 ELELEKPEKNITELIFNILAQLCSCADGREQFLKHAGSIAMISKRVLRVSPATDDRALHI 360

Query: 361 LSLISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIG 420
           L  ISK SA  +  +EMLRVGAVSKLCM++Q+DC  YLK+KAR ILR+HS++W+NSPCI 
Sbjct: 361 LDSISKFSASDEAALEMLRVGAVSKLCMVIQADCAPYLKKKARGILRLHSHMWNNSPCIA 409

Query: 421 VYLMTRDP 422
           VYL+TR P
Sbjct: 421 VYLLTRYP 409

[Close]

BLAST of CmaCh10G008620.1 vs. NCBI nr
Match: gi|590586283|ref|XP_007015663.1| (Plant U-box 24, putative [Theobroma cacao])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 222/427 (51.99%), Postives = 301/427 (70.49%), Query Frame = 1


Query: 1   MDELAVPPYFICPISLQIMKDPVTATTGITYDRESIENWFLTSKDAIFCPLTKQPLTKAS 60
           MDE+ +P YF+CPISLQIMKDPVTA TGITYDRESIE W   + D   CP+TKQPL   S
Sbjct: 1   MDEIDIPQYFLCPISLQIMKDPVTAVTGITYDRESIEQWLKIATDTT-CPVTKQPLPSDS 60

Query: 61  DLTPNHTLHRLIKSWLVENATPGSGFDRILSPRPLLDKTHLRKLLRDLTASDDGLRHDAV 120
           DLTPNHTL RLI++W  EN +  +G DRI +P+  L K+ + KL+R+   +   +  +A+
Sbjct: 61  DLTPNHTLRRLIQAWCTENES--NGIDRIPTPKSPLSKSRVIKLMREFEHTSFYV--NAL 120

Query: 121 RKLYALAIEGDTACRGRMVEVGVAKGMVLFVMRCFKEGKVGGLEEGLKILSVLESYSICE 180
           +K+ AL  E +   R  M E GVAK ++L + RC+KE ++ GLEE L+++ ++ + S  E
Sbjct: 121 KKMEALGKENEKN-RKCMEEAGVAKAVILLLRRCYKERRITGLEEALRLVYLIWTPS-SE 180

Query: 181 TRVL-----DVIDSLNWVLGLEMENHIIIKSYAIEVLKKAIDAAPSTVISGYELRYHEFE 240
            + L     D+ID L W+LG EMEN +++K++ + VL+K I+ A + ++   +       
Sbjct: 181 VKALVNENHDLIDCLTWILGCEMENPVVVKTHTMLVLRKVIEVANTRLVEKLK------- 240

Query: 241 SRYQGFESLQFFKNVTNLLREKISNSALKTTLTILTKLCHWGRNRIKLVEVGAVFNLIAL 300
                   L+FFK +  +L+ KIS  A K+ L I+ ++C WGRN+ K+VE  A+F LI  
Sbjct: 241 --------LEFFKEILRVLKLKISQQATKSALLIMIEVCLWGRNKSKIVEANAIFELIEF 300

Query: 301 ELEKPEKNITELIFNLLAHLCTTADGRAELVRHAGGIAVVSKRILRVSIATTDRAIQILS 360
           EL+ PEKNITEL  NLLAHLC+ ADGRA+ +RHAG IA+V+KRILRVS AT D+A+ ILS
Sbjct: 301 ELQNPEKNITELNINLLAHLCSCADGRAQFLRHAGSIAMVAKRILRVSPATDDQAVHILS 360

Query: 361 LISKHSARKDVLVEMLRVGAVSKLCMMMQSDCEGYLKEKAREILRMHSNVWSNSPCIGVY 420
           LISK+SA K VL+EMLRVGAV+KLCM++Q+DC  YLKEKAR +LR+HSN+W+NSPCI VY
Sbjct: 361 LISKYSATKQVLLEMLRVGAVTKLCMVIQADCAAYLKEKARGVLRLHSNLWNNSPCIAVY 405

Query: 421 LMTRDPR 423
           L+TR  R
Sbjct: 421 LLTRYQR 405

The following BLAST results are available for this feature:

BLAST of CmaCh10G008620.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB24_ARATH	2.0e-71	39.52	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24 PE=1 SV=1	[more]
PUB23_ARATH	3.9e-64	35.95	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1	[more]
PUB22_ARATH	2.0e-31	36.97	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1	[more]
PUB25_ARATH	3.5e-28	30.24	U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1	[more]
PUB26_ARATH	8.6e-27	28.64	U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1	[more]

BLAST of CmaCh10G008620.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M309_CUCSA	7.5e-187	80.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633420 PE=4 SV=1	[more]
B9HQ77_POPTR	5.8e-115	53.04	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02140g PE=4 SV=1	[more]
A0A061GVU0_THECC	8.4e-114	51.99	Plant U-box 24, putative OS=Theobroma cacao GN=TCM_041223 PE=4 SV=1	[more]
F6HAE4_VITVI	4.2e-113	51.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00370 PE=4 SV=...	[more]
A0A067KML0_JATCU	3.9e-111	52.58	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13635 PE=4 SV=1	[more]

BLAST of CmaCh10G008620.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11840.1	1.1e-72	39.52	plant U-box 24	[more]
AT2G35930.1	2.2e-65	35.95	plant U-box 23	[more]
AT3G52450.1	1.1e-32	36.97	plant U-box 22	[more]
AT3G19380.1	2.0e-29	30.24	plant U-box 25	[more]
AT1G49780.1	4.8e-28	28.64	plant U-box 26	[more]

BLAST of CmaCh10G008620.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442749\|ref\|XP_004139143.1\|	1.1e-186	80.85	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]	[more]
gi\|659099174\|ref\|XP_008450468.1\|	1.2e-185	79.67	PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Cucumis melo]	[more]
gi\|743929230\|ref\|XP_011008842.1\|	2.2e-115	53.27	PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Populus euphratica]	[more]
gi\|224106714\|ref\|XP_002314258.1\|	8.4e-115	53.04	hypothetical protein POPTR_0009s02140g [Populus trichocarpa]	[more]
gi\|590586283\|ref\|XP_007015663.1\|	1.2e-113	51.99	Plant U-box 24, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003613	Ubox_domain
IPR011989	ARM-like
IPR013083	Znf_RING/FYVE/PHD
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G008620	CmaCh10G008620	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G008620.1	CmaCh10G008620.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G008620.1.CDS.1	CmaCh10G008620.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G008620.1.exon.1	CmaCh10G008620.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 6..79 score: 1.5
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 9..75 score: 1.3
IPR003613	U box domain	PROFILE	PS51698	U_BOX	coord: 5..82 score: 3
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 247..392 score: 1.2E-10coord: 100..143 score: 1.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 6..79 score: 7.1
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 235..389 score: 4.53E-11coord: 101..130 score: 4.53
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 1..226 score: 3.1E-148coord: 242..422 score: 3.1E
None	No IPR available	PANTHER	PTHR22849:SF0	WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1	coord: 1..226 score: 3.1E-148coord: 242..422 score: 3.1E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 4..81 score: 3.3