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The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCATTTCTCGAATGGGAGGATTTTGCTGATGGGGGTGGGTTAGTTTGGTGGTATTTTACGTTGCAAGTGTGCAATATAGATTATGTTTGCATTTCTCATCGATAGTCCAAGTGCTGGGTATCTATAGAGTTAGCCATTTGGTGAAGCAGGTTAATAAAGGAGTTTTATAAATTTCTTTGTTTTAGGGAGTTGACTTGTTTTATTTGATATTTTCTTATGGGGGTGCTATCCTAGGGCAACTGCTGTGAATTTTACGACAGATCGACAGGATTATTTAGCGTGAGGGCGGGGGCTACTTCATGTTCTTATCCTTCTGTTTTTTTCGCCTTTGAATGTCTGCTATACTATTCTATATGTCTCTAATGTCTAGACCACAAGGAACTTCTGAAGGAGCTTGAGGAGATAGATTTGATGAGATGACTCTGAAATTATATTTTGCTGTTTAAGTCGGTTTCTTTGTGCATACCTTCCTATTATTCTGCTTTTGAACAGATACTTTGAAGTGAGTCGAATTCTCCAGCAAGACCATAGCATGTCGTTGCTTCGAGACGGGATGTCTGATCTACAGGAACACTCCCTGAAGCCTTCAGGCCAGGTTTTCACTATCGTAACTAATTGTTGATCTGCTTTTCTTTTCTTCTTTTTGCCTTAGAACACTGCATTTGAAATTTTCAGGTTTTTCTACCCATATATATATGTCATCGTGCAGACGTTTGAAAATGACGTTTAAAAGGTCTGCTTTTGAAGTATTTTCGAATGGTTGTACAACTATCACTTCTGTTTCTCTTGTGTTTCTCTCATTGCTCTTGATGAACTTGATGAGATTCCTTAGAACTTTGAACGCCTCAGACCTACCGCTAGCAGATATTGTCCTTTTTGGGCTTTCCCTCAAAGCTTTAAAATGCGTTTGATAGGGGAAGGTTTCCACACCCTCATAAATGGTAGTTTGTTTTCTTCTCCAACCAATGTAGAACATCACAATTTAGAAGACACTTGATGATTCATTAGCCTTTATGATGGTCACAATTTAGAAGACACTTGATGATTCATTAGCCTTTATGATGGAGCTGGATGAAATTTTTGTGGTAAATTCGAGCGATGTGCTGATTTGATTA mRNA sequence ATGGCATTTCTCGAATGGGAGGATTTTGCTGATGGGGTCCAAGTGCTGGGTATCTATAGAGTTAGCCATTTGGTGAAGCAGGGCAACTGCTGTGAATTTTACGACAGATCGACAGGATTATTTAGCGTGAGGGCGGGGGCTACTTCATGTTCTTATCCTTCTGTTTTTTTCGCCTTTGAATATGACTCTGAAATTATATTTTGCTGTTTAAGTCGGTTTCTTTGTGCATACCTTCCTATTATTCTGCTTTTGAACAGATACTTTGAAGTGAGTCGAATTCTCCAGCAAGACCATAGCATGTCGTTGCTTCGAGACGGGATGTCTGATCTACAGGAACACTCCCTGAAGCCTTCAGGCCAGGTTTTTCTACCCATATATATATGTCATCGTGCAGACGTTTGAAAATGACGTTTAAAAGGTCTGCTTTTGAAGTATTTTCGAATGGTTGTACAACTATCACTTCTGTTTCTCTTGTGTTTCTCTCATTGCTCTTGATGAACTTGATGAGATTCCTTAGAACTTTGAACGCCTCAGACCTACCGCTAGCAGATATTGTCCTTTTTGGGCTTTCCCTCAAAGCTTTAAAATGCGTTTGATAGGGGAAGGTTTCCACACCCTCATAAATGGTAGTTTGTTTTCTTCTCCAACCAATGTAGAACATCACAATTTAGAAGACACTTGATGATTCATTAGCCTTTATGATGGTCACAATTTAGAAGACACTTGATGATTCATTAGCCTTTATGATGGAGCTGGATGAAATTTTTGTGGTAAATTCGAGCGATGTGCTGATTTGATTA Coding sequence (CDS) ATGGCATTTCTCGAATGGGAGGATTTTGCTGATGGGGTCCAAGTGCTGGGTATCTATAGAGTTAGCCATTTGGTGAAGCAGGGCAACTGCTGTGAATTTTACGACAGATCGACAGGATTATTTAGCGTGAGGGCGGGGGCTACTTCATGTTCTTATCCTTCTGTTTTTTTCGCCTTTGAATATGACTCTGAAATTATATTTTGCTGTTTAAGTCGGTTTCTTTGTGCATACCTTCCTATTATTCTGCTTTTGAACAGATACTTTGAAGTGAGTCGAATTCTCCAGCAAGACCATAGCATGTCGTTGCTTCGAGACGGGATGTCTGATCTACAGGAACACTCCCTGAAGCCTTCAGGCCAGGTTTTTCTACCCATATATATATGTCATCGTGCAGACGTTTGA Protein sequence MAFLEWEDFADGVQVLGIYRVSHLVKQGNCCEFYDRSTGLFSVRAGATSCSYPSVFFAFEYDSEIIFCCLSRFLCAYLPIILLLNRYFEVSRILQQDHSMSLLRDGMSDLQEHSLKPSGQVFLPIYICHRADV
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
Term | Definition |
GO Assignments
This mRNA is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0008150 |
biological_process |
cellular_component |
GO:0005575 |
cellular_component |
molecular_function |
GO:0003674 |
molecular_function |
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmaCh10G008520.1 | CmaCh10G008520.1-protein | polypeptide |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh10G008520.1.exon.5 | CmaCh10G008520.1.exon.5 | exon |
CmaCh10G008520.1.exon.4 | CmaCh10G008520.1.exon.4 | exon |
CmaCh10G008520.1.exon.3 | CmaCh10G008520.1.exon.3 | exon |
CmaCh10G008520.1.exon.2 | CmaCh10G008520.1.exon.2 | exon |
CmaCh10G008520.1.exon.1 | CmaCh10G008520.1.exon.1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh10G008520.1.CDS.1 | CmaCh10G008520.1.CDS.1 | CDS |
CmaCh10G008520.1.CDS.2 | CmaCh10G008520.1.CDS.2 | CDS |
CmaCh10G008520.1.CDS.3 | CmaCh10G008520.1.CDS.3 | CDS |
CmaCh10G008520.1.CDS.4 | CmaCh10G008520.1.CDS.4 | CDS |
CmaCh10G008520.1.CDS.5 | CmaCh10G008520.1.CDS.5 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh10G008520.1.three_prime_UTR.1 | CmaCh10G008520.1.three_prime_UTR.1 | three_prime_UTR |
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | unknown | Coil | Coil | coord: 130..133 scor |
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