CmaCh10G000300.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000300.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Sterile alpha motif (SAM) domain-containing protein
Location	Cma_Chr10 : 110368 .. 111306 (+)
Sequence length	939

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAACCCCCCGACCCCCAGACTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACTGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGATTCATCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGTTCGGCGGGGGGTGGGGGGGCCGAGTTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTCAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGTGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGAGAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATAGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTACCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGATACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAATCCAGAAGTTGGGGAAGGGATTTTCATGA

mRNA sequence

ATGGCCGATATTCAACCCCCCGACCCCCAGACTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACTGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGATTCATCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGTTCGGCGGGGGGTGGGGGGGCCGAGTTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTCAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGTGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGAGAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATAGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTACCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGATACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAATCCAGAAGTTGGGGAAGGGATTTTCATGA

Coding sequence (CDS)

ATGGCCGATATTCAACCCCCCGACCCCCAGACTAACGGCGCCCCTGCCCCTCCCGTCGTCTCCTCCGAAACTGTTGGATCCAAACGCCAGCGAAGACCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCCTATGCCCGCCGCACCAATAAGCCCTGGAAGTTTGCCTCGGATAATCGCAAGGATTCATCCGCTGCCTCTGCCAAGAACTCCAAAACTCGGCCCTTGACCAACTTGAGTTCGGCGGGGGGTGGGGGGGCCGAGTTTCGCGAGACCCCAGAGGGCGAAGACAAAGAGAACAATTTGGATAGCGTTGCAATTGGGAGCTGGAGATTGAAGGATTCCAAGCGGAGAGGCTCAGCCGCCACCAAGAGGGTCAGAACTAATTGGGTATCCCCCAAGCACGACGAAGGCGGTGGAGGGGGGGAGGCAGATGAAAAGTATAGCGCCGGCGAAGACGTGGAGGAGGGGTATCGGGATTACGACGTTGAGAACTCGGAAAGTCCCCTGAAAGAACAAAGCTCAATGCATTCGCTTGAGAATTTGGCGATAGAAGGTGAGGGGAAGGAAAGGGAGATGCTTTATCAGGGGAATAGAAGATGTACCCGGTCTAGGGTTTCGGAGGGTAGAGAGCACCAAGATGGGCTCGAGTTTTCAGGGCCTTCGGATACGGATGCCAGGAATTGGAAATGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGAGTAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTGTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAACTGCAGTTGGGTCCCGGAGAAAAATGTACTCCGCAATCCAGAAGTTGGGGAAGGGATTTTCATGA

Protein sequence

MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSKRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAIQKLGKGFS

Homology

[Close]

BLAST of CmaCh10G000300.1 vs. Swiss-Prot
Match: BIC1B_XENLA (Protein bicaudal C homolog 1-B OS=Xenopus laevis GN=bicc1-b PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 1


Query: 168 ENSESPLKEQSSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLE--FSGP 227
           ENS   L   +S   L N +     +ER  +   +   + S  S  R+     E   S  
Sbjct: 789 ENSPMSLSRSNSREQLGNGSDSDNWRERNGIDSSHNDYSSSIGSPKRKQNKSAEHYLSSS 848

Query: 228 SDTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLED 287
           +  D  +   G++G    +  +G D   ++ + LGLG+Y  +F+  E+D +    LT +D
Sbjct: 849 NYMDCISSLTGSNGCNLNSSFKGSDLPELF-SKLGLGKYTDIFQQQEIDLQTFLTLTDQD 908

Query: 288 LKDMGITAVGSRRKMYSAIQKLGK 310
           LK++GIT  G+RRKM  AI +L K
Sbjct: 909 LKELGITTFGARRKMLLAISELNK 931

[Close]

BLAST of CmaCh10G000300.1 vs. TrEMBL
Match: E5GBM6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.7e-148
Identity = 274/315 (86.98%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQ NGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            DNRKDSSAA+AKNSKTRPLTN SSA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSSM 180
           RRGSAATKR RTNWVS KHDEGGGGGEADEKYSAGEDV+EGYRDYD+ENSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWVSSKHDEGGGGGEADEKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLA+EG+G +REMLYQGNRR  RSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAIQKLGKGFS 313
           RKMY AIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmaCh10G000300.1 vs. TrEMBL
Match: A0A0A0LRM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.3e-147
Identity = 271/315 (86.03%), Postives = 287/315 (91.11%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQ NGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            +NRKDSSAA+AKNSKTRPLTN SSA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSSM 180
           RRGSAATKR RTNW S KHDEGGGGGEAD+KYSAGEDV+EGYRDYD+ENSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWASSKHDEGGGGGEADDKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLA+EG+G +REMLYQGNRR  RSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAIQKLGKGFS 313
           RKMY AIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmaCh10G000300.1 vs. TrEMBL
Match: W9RHC5_9ROSA (Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.2e-104
Identity = 219/341 (64.22%), Postives = 255/341 (74.78%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAP---------------APPVVSSETVGSKRQRRPSVRLGDIGGDQP 60
           MA+IQPP+ Q NG                 A  +  SETVGSKRQRRPSVRLGDIGGDQP
Sbjct: 1   MAEIQPPEAQINGGGGVGGAVSGGVGGGGGAMLMGPSETVGSKRQRRPSVRLGDIGGDQP 60

Query: 61  YDSYARRTNKPWKFASDNRKDSSAAS---AKNSKTRPLTNLSSAGGGGAEFRETPEGEDK 120
           YDS+ RRT+K WK   ++   S   +   AK SKTRPL N SS GG   +  +  E E +
Sbjct: 61  YDSHVRRTSKQWKLPIEHHHHSQRTNRDFAKTSKTRPLINFSS-GGDALDALDLDEREIR 120

Query: 121 ENNLDSVAIGSWRLKDSKRRGSAATKRVRTNWVSPKHDEGGGGG------EADEKYSAGE 180
           + NL+++AIGSW+LKDSK+RGS +TKR+R+NW+SPK D+GGGGG      E DEKYSAGE
Sbjct: 121 DANLETMAIGSWKLKDSKKRGSISTKRIRSNWISPKLDDGGGGGADTGGAEGDEKYSAGE 180

Query: 181 DVEEGYRDYDVENSESPLKEQSSMHSLENLAIEGEG--KEREMLYQGNRRCTRSRVSEGR 240
           DV++G RD+DVENSESPLKEQS +HSLENLA++G G   ERE+LY GNRR  R+RVS+  
Sbjct: 181 DVDDGNRDFDVENSESPLKEQSPIHSLENLAVDGHGIGNEREVLYHGNRRQIRARVSD-- 240

Query: 241 EHQDGLEFSGPSDTDARNWKCGTSGDRNGNGGRG---VDGVRVWLNGLGLGRYAPVFEIH 300
            + DG+E SGPSD +AR WKC   GDRNGNGGR     DGVRVWLNGLGLGRYAPVFE+H
Sbjct: 241 -NHDGMELSGPSDNEAREWKC---GDRNGNGGRARCEEDGVRVWLNGLGLGRYAPVFEVH 300

Query: 301 EVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAIQKLGKGFS 313
           EVDDEVLPMLTLEDLKDMGI AVGSRRKM+ AIQKLGKGFS
Sbjct: 301 EVDDEVLPMLTLEDLKDMGINAVGSRRKMFCAIQKLGKGFS 334

[Close]

BLAST of CmaCh10G000300.1 vs. TrEMBL
Match: M5WEK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 191/282 (67.73%), Postives = 224/282 (79.43%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MA+I PP  Q NG     + SSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQLM-LGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            D+RKDS+    K+SKTRPLTNLS+    GA+F+ET +GED+E NLDSVAIGSW++KD+K
Sbjct: 61  LDHRKDSN----KSSKTRPLTNLSA----GADFQETLDGEDREGNLDSVAIGSWKVKDTK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGG--GGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQS 180
           +R S  TKRVR+NWVS K DEGG     E D+K+S GEDVE+GYR +DVENSESPLK+QS
Sbjct: 121 KRASN-TKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRVFDVENSESPLKDQS 180

Query: 181 SMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS +NL ++G   ER++LY G+RR  R+RVSEGR+H DG+E SGPSD DAR+W C GT
Sbjct: 181 PIHSSDNLGVDGHLNERDVLYHGSRRPMRTRVSEGRDHHDGVELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDE 277
           SGDRNGN GRG    DGVRVWLNGLGLGRYAP+FEIHEVDDE
Sbjct: 241 SGDRNGNEGRGTCGEDGVRVWLNGLGLGRYAPMFEIHEVDDE 272

[Close]

BLAST of CmaCh10G000300.1 vs. TrEMBL
Match: A0A067JFD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 9.7e-91
Identity = 211/338 (62.43%), Postives = 247/338 (73.08%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAP-----------AP-PVVSSETVGSKRQRRPSVRLGDIGGDQPYDS 60
           MADIQPP+   NG             AP  V SSETVGSKRQRRPSVRLG+IGGDQ YD+
Sbjct: 1   MADIQPPEGHLNGGSVGGVSVDRGVGAPIAVTSSETVGSKRQRRPSVRLGEIGGDQLYDT 60

Query: 61  YARRT--NKPWK----FASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDK 120
           + RRT  NK WK     + D++KD ++++ K SKTR LTNL+++G    EF ET + EDK
Sbjct: 61  HPRRTSNNKQWKHHQLLSLDHKKDPNSSN-KGSKTRALTNLTTSG----EFAETLD-EDK 120

Query: 121 ENNLDSVAIGSWRLKDSKRRGS-AATKRVRTNWVSPKHDEGGGGG-----EADEKYSAGE 180
           E NLDS+AIGSWR+KDSK+R S A TKRVR+NWVS K D+GGGGG     E DEKYS GE
Sbjct: 121 EVNLDSIAIGSWRVKDSKKRASNATTKRVRSNWVS-KIDDGGGGGSHNNVEGDEKYSGGE 180

Query: 181 DVEEGYRDYDVENSESPLKEQSSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREH 240
           DV++ YR++D+ENS+SPLKEQS +HSLENL    E  EREM Y  NRR  R+R +     
Sbjct: 181 DVDDTYREFDMENSDSPLKEQSPVHSLENLGDGNERNEREMYY--NRRTIRARDNHNHNR 240

Query: 241 -QDGLEFSGPSDTDARNWKCGTSGDRNGN-GGRGVDGVRVWLNGLGLGRYAPVFEIHEVD 300
             DG+E SGPSDTDAR+++       NG  GG G DGVR+WLN +GLGRYAP FEIHEVD
Sbjct: 241 LHDGVELSGPSDTDARDYR------NNGRCGGGGEDGVRIWLNSIGLGRYAPFFEIHEVD 300

Query: 301 DEVLPMLTLEDLKDMGITAVGSRRKMYSAIQKLGKGFS 313
           DEVLPMLTLEDLKDMGI AVGSRRKM+ AIQKLGKGFS
Sbjct: 301 DEVLPMLTLEDLKDMGIKAVGSRRKMFCAIQKLGKGFS 323

[Close]

BLAST of CmaCh10G000300.1 vs. TAIR10
Match: AT3G48800.1 (AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-54
Identity = 155/333 (46.55%), Postives = 192/333 (57.66%), Query Frame = 1


Query: 1   MADIQPPD-PQTNGAPA--PPVVSSETV-----GSKRQRRPSVRLGDIGGDQ-------- 60
           MA++QP D  QTNG     P   S+E       GSKR RRPSVRLG+IGGDQ        
Sbjct: 1   MAELQPVDGQQTNGGVVTIPASTSAEATAIAAAGSKRLRRPSVRLGEIGGDQYQQQHHHH 60

Query: 61  ----PYDSYARRTNKPWKFASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGE 120
                YDS  R++       S NRKD+S    K+S+TR LTNLSS    G E   T + E
Sbjct: 61  AAAAAYDSQGRKSKWTPTTTSGNRKDTS----KSSRTRTLTNLSS----GYENIGTLDDE 120

Query: 121 DKENNLDSVAIGSWRLKDSKRRGS-AATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVE 180
            +E N+DS  +GSWR+K  KR GS AA KRVR+NWVS         G+ DEK S GE++E
Sbjct: 121 -REGNVDSFGVGSWRVK--KRVGSSAAAKRVRSNWVSKV-------GDGDEKISGGEELE 180

Query: 181 EGYRDYDVENSESPLKEQSSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDG 240
            G+RD+  E+SESP+KE       E+L  +G G      + G RR   +  S  RE +  
Sbjct: 181 GGFRDFSREDSESPIKE-------ESLDRDGGG------FYGRRRYESNNSSGNREFESN 240

Query: 241 LEFSGPSDTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLP 300
           ++                        G G +GV++WL  LGLGRY P+FEIHEVD+EVLP
Sbjct: 241 MD------------------------GGGKEGVKIWLQELGLGRYWPMFEIHEVDEEVLP 278

Query: 301 MLTLEDLKDMGITAVGSRRKMYSAIQKLGKGFS 313
           +LTLEDLKDMGI AVGSRRKM+ AIQKLG+ FS
Sbjct: 301 LLTLEDLKDMGINAVGSRRKMFCAIQKLGREFS 278

[Close]

BLAST of CmaCh10G000300.1 vs. TAIR10
Match: AT5G23680.1 (AT5G23680.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 155.2 bits (391), Expect = 6.5e-38
Identity = 130/326 (39.88%), Postives = 167/326 (51.23%), Query Frame = 1


Query: 14  APAPPVVSSETVGSKRQRRPSVRLGDIGGDQ-------PYDSYARRTNKPWKFASD---- 73
           AP     +  +VGSKR RRPSVRLGDIGGDQ        YDS   R  K W+ +      
Sbjct: 27  APETSAAAGVSVGSKRLRRPSVRLGDIGGDQYHQHVVAAYDSPQVRRPK-WRPSGGGGGG 86

Query: 74  --NRKDSSAASAK---NSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLK 133
             NRK+ +  S K   +S+TR +TNLSS G     +  T   ++     D V+IGSWR+K
Sbjct: 87  GGNRKEPNNQSGKTTSSSRTRTMTNLSSGG-----YENTGTLDE-----DPVSIGSWRVK 146

Query: 134 D-----------SKRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYD 193
                       +    +A+ KRVR+NW +       G  + DEK+S  E+ EE   +  
Sbjct: 147 KWVKSSGGETAATTTTNTASAKRVRSNWAT----RNDGVEQGDEKFSGEEEEEEEDEELG 206

Query: 194 VENSESPLKEQSSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPS 253
            E        + S         E   KER             R  E RE    +E  G  
Sbjct: 207 GEEGFRDFSREDS---------ESPMKER-------------RRYENRE----VELLG-- 266

Query: 254 DTDARNWKCGTSGDRNGNGGRGVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDL 313
                +W+         +GGRG +GV++WL  LGLGRY P+FE+HEVD++VLP+LTLEDL
Sbjct: 267 -----DWQ---------SGGRGKEGVKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDL 295

[Close]

BLAST of CmaCh10G000300.1 vs. TAIR10
Match: AT2G45700.1 (AT2G45700.1 sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 255 WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSRRKMYSAIQKLGKGFS 313
           WL  LGL +Y  VF   E+D + L  LT EDL  +GIT++G R+K+ +A+  +   F+
Sbjct: 247 WLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDPFA 304

[Close]

BLAST of CmaCh10G000300.1 vs. NCBI nr
Match: gi|659128810|ref|XP_008464381.1| (PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo])

HSP 1 Score: 533.5 bits (1373), Expect = 2.5e-148
Identity = 274/315 (86.98%), Postives = 288/315 (91.43%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQ NGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            DNRKDSSAA+AKNSKTRPLTN SSA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LDNRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSSM 180
           RRGSAATKR RTNWVS KHDEGGGGGEADEKYSAGEDV+EGYRDYD+ENSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWVSSKHDEGGGGGEADEKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLA+EG+G +REMLYQGNRR  RSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAIQKLGKGFS 313
           RKMY AIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmaCh10G000300.1 vs. NCBI nr
Match: gi|778655234|ref|XP_011649522.1| (PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus])

HSP 1 Score: 529.3 bits (1362), Expect = 4.7e-147
Identity = 271/315 (86.03%), Postives = 287/315 (91.11%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MADIQPPDPQ NGAP P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSY RRTNKPWKF+
Sbjct: 1   MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFS 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            +NRKDSSAA+AKNSKTRPLTN SSA           + EDKENNLD+VAIGSWRLKDSK
Sbjct: 61  LENRKDSSAATAKNSKTRPLTNFSSA-----------DAEDKENNLDTVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSSM 180
           RRGSAATKR RTNW S KHDEGGGGGEAD+KYSAGEDV+EGYRDYD+ENSESPLKEQSSM
Sbjct: 121 RRGSAATKRARTNWASSKHDEGGGGGEADDKYSAGEDVDEGYRDYDIENSESPLKEQSSM 180

Query: 181 HSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLA+EG+G +REMLYQGNRR  RSRVSEGR+HQ+GLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGSR 300
           RNGNGGRG+   DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI+AVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYSAIQKLGKGFS 313
           RKMY AIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 304

[Close]

BLAST of CmaCh10G000300.1 vs. NCBI nr
Match: gi|645268464|ref|XP_008239539.1| (PREDICTED: uncharacterized protein LOC103338131 [Prunus mume])

HSP 1 Score: 413.3 bits (1061), Expect = 3.8e-112
Identity = 225/318 (70.75%), Postives = 259/318 (81.45%), Query Frame = 1


Query: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKFA 60
           MA+I PP  Q NG     + SSETVGSKRQRRPSVRLGDIGGDQPYDS+ RRT K WK  
Sbjct: 1   MAEIPPPMGQINGGQLM-LGSSETVGSKRQRRPSVRLGDIGGDQPYDSHVRRTTKQWKLP 60

Query: 61  SDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDSK 120
            D+RKDS+    K+SKTRPLTNLS+    GA+F+ET +GED+E NLDSVAIGSW++KD+K
Sbjct: 61  LDHRKDSN----KSSKTRPLTNLSA----GADFQETLDGEDREGNLDSVAIGSWKVKDTK 120

Query: 121 RRGSAATKRVRTNWVSPKHDEGG--GGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQS 180
           +R S  TKRVR+NWVS K DEGG     E D+K+S GEDVE+GYRD+DVENSESPLK+QS
Sbjct: 121 KRASN-TKRVRSNWVSSKIDEGGDAAAAEGDDKFSGGEDVEDGYRDFDVENSESPLKDQS 180

Query: 181 SMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS +NL ++G   ER++LY G+RR  R+RVSEGR+H DG+E SGPSD DAR+W C GT
Sbjct: 181 PLHSSDNLGVDGHLNERDVLYHGSRRPIRTRVSEGRDHHDGVELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGR---GVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAV 300
           SGDRNGN GR   G DGVRVWLNGLGLGRYAP+FEIHEVDDEVLPMLTLEDLKDMGI AV
Sbjct: 241 SGDRNGNEGRGRCGEDGVRVWLNGLGLGRYAPMFEIHEVDDEVLPMLTLEDLKDMGINAV 300

Query: 301 GSRRKMYSAIQKLGKGFS 313
           G+RRKMY AIQKLGKGFS
Sbjct: 301 GTRRKMYCAIQKLGKGFS 308

[Close]

BLAST of CmaCh10G000300.1 vs. NCBI nr
Match: gi|694385936|ref|XP_009368780.1| (PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri])

HSP 1 Score: 409.8 bits (1052), Expect = 4.2e-111
Identity = 228/319 (71.47%), Postives = 257/319 (80.56%), Query Frame = 1


Query: 1   MADIQP-PDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKF 60
           MA+IQP P  Q NG     + SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  K WKF
Sbjct: 1   MAEIQPQPVSQINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKQWKF 60

Query: 61  ASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120
             D+RKD++    K+SK RPLTNLSS G    EF ET +GED+E NLDSVAIGSW++KD+
Sbjct: 61  PPDHRKDAN----KSSKIRPLTNLSSVG----EFHETLDGEDREGNLDSVAIGSWKVKDA 120

Query: 121 KRRGSAATKRVRTNWVSPKHDEGGGGG-EADEKYSAGEDVEEGY-RDYDVENSESPLKEQ 180
           K+R S  TKRVR+NWVS K DEGGGGG E DEK+S  EDV+EGY RD+DVENSESPLKEQ
Sbjct: 121 KKRASNVTKRVRSNWVSSKIDEGGGGGGEGDEKFSGAEDVDEGYHRDFDVENSESPLKEQ 180

Query: 181 SSMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKC-G 240
           S + S ENL ++G    RE+LY G+RR  R+R+SEGR++ DG+E SGPSDTDAR+W C G
Sbjct: 181 SPILSSENLGVDGRANGRELLYHGSRRPIRTRISEGRDNHDGIEQSGPSDTDARDWNCRG 240

Query: 241 TSGDRNGNGGR---GVDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITA 300
           TSGDR+ N GR   G DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+A
Sbjct: 241 TSGDRDENEGRERCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISA 300

Query: 301 VGSRRKMYSAIQKLGKGFS 313
           VGSRRKMY AIQKLGKGFS
Sbjct: 301 VGSRRKMYCAIQKLGKGFS 311

[Close]

BLAST of CmaCh10G000300.1 vs. NCBI nr
Match: gi|657962638|ref|XP_008372918.1| (PREDICTED: uncharacterized protein LOC103436275 [Malus domestica])

HSP 1 Score: 403.7 bits (1036), Expect = 3.0e-109
Identity = 222/318 (69.81%), Postives = 254/318 (79.87%), Query Frame = 1


Query: 1   MADIQP-PDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTNKPWKF 60
           MA+IQP P PQ NG     + SSETVGSKRQRRPSVRLGDIGGDQPYDS  RR  K W+ 
Sbjct: 1   MAEIQPQPVPQINGGGQFLMGSSETVGSKRQRRPSVRLGDIGGDQPYDSQVRRATKQWRL 60

Query: 61  ASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120
             D+RKD++    K+SK RPLTNLSS G    EF ET +GED+E NLDSVAIGSW++KD+
Sbjct: 61  PPDHRKDAN----KSSKPRPLTNLSSVG----EFHETLDGEDREANLDSVAIGSWKVKDA 120

Query: 121 KRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGY-RDYDVENSESPLKEQS 180
           K+R S+ TKRVR+NWVS K DEGGG  E DEK+S  EDV++GY RD+DVENSESPLKE+S
Sbjct: 121 KKRASSVTKRVRSNWVSSKIDEGGG--EGDEKFSGAEDVDDGYHRDFDVENSESPLKERS 180

Query: 181 SMHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKC-GT 240
            +HS ENL ++G    RE+LY G+RR  R+R+SEGR++ DG+E SGPSD DAR+W C GT
Sbjct: 181 PIHSSENLGVDGHANGRELLYHGSRRPIRTRISEGRDNHDGIELSGPSDNDARDWNCRGT 240

Query: 241 SGDRNGNGGRG---VDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAV 300
           SG R GN GRG    DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMG+ AV
Sbjct: 241 SGVRIGNEGRGRCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGVNAV 300

Query: 301 GSRRKMYSAIQKLGKGFS 313
           GSRRKMY AIQKLGKGFS
Sbjct: 301 GSRRKMYCAIQKLGKGFS 308

The following BLAST results are available for this feature:

BLAST of CmaCh10G000300.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIC1B_XENLA	4.7e-06	30.56	Protein bicaudal C homolog 1-B OS=Xenopus laevis GN=bicc1-b PE=2 SV=1	[more]

BLAST of CmaCh10G000300.1 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBM6_CUCME	1.7e-148	86.98	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LRM8_CUCSA	3.3e-147	86.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000710 PE=4 SV=1	[more]
W9RHC5_9ROSA	1.2e-104	64.22	Protein bicaudal C-1-like protein OS=Morus notabilis GN=L484_008845 PE=4 SV=1	[more]
M5WEK2_PRUPE	2.3e-92	67.73	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023714mg PE=4 S...	[more]
A0A067JFD7_JATCU	9.7e-91	62.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1	[more]

BLAST of CmaCh10G000300.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48800.1	2.2e-54	46.55	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G23680.1	6.5e-38	39.88	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G45700.1	2.3e-06	41.38	sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of CmaCh10G000300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128810\|ref\|XP_008464381.1\|	2.5e-148	86.98	PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo]	[more]
gi\|778655234\|ref\|XP_011649522.1\|	4.7e-147	86.03	PREDICTED: uncharacterized protein LOC101208783 [Cucumis sativus]	[more]
gi\|645268464\|ref\|XP_008239539.1\|	3.8e-112	70.75	PREDICTED: uncharacterized protein LOC103338131 [Prunus mume]	[more]
gi\|694385936\|ref\|XP_009368780.1\|	4.2e-111	71.47	PREDICTED: uncharacterized protein LOC103958261 [Pyrus x bretschneideri]	[more]
gi\|657962638\|ref\|XP_008372918.1\|	3.0e-109	69.81	PREDICTED: uncharacterized protein LOC103436275 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001660	SAM
IPR013761	SAM/pointed_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G000300	CmaCh10G000300	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G000300.1	CmaCh10G000300.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G000300.1.exon.1	CmaCh10G000300.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G000300.1.CDS.1	CmaCh10G000300.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 249..307 score: 8.4
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 244..310 score: 3.3
IPR001660	Sterile alpha motif domain	PROFILE	PS50105	SAM_DOMAIN	coord: 247..310 score: 15
IPR013761	Sterile alpha motif/pointed domain	GENE3D	G3DSA:1.10.150.50		coord: 249..307 score: 2.5
IPR013761	Sterile alpha motif/pointed domain	unknown	SSF47769	SAM/Pointed domain	coord: 248..307 score: 7.33
None	No IPR available	PANTHER	PTHR10627	SCP160	coord: 21..312 score: 6.0