CmaCh09G012870.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTTTCATGTGTCCATCCCCCCATGAATACCCTAGAGGTGTGAACCCAAGCTCCACTTCAAGAATATTAGCGGCCATACCCTGTTGGCGCCAAATCCCCCTTCTTCACTATTCCTATGGCGGCCACGCACGTTCTTCAAATTATATATAAATTATGAACACCCTTTAATCCAATCTCTTCAAATTAAGATTTTTGCCCTTGATTTCATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGCGGCGGCGGCAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGCTCATGCTTCTGGGGTTGGTTATTCGCCTTGTTCGGATGCTCCAGTGACGACGACAACGACAGCGGTGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGAGGATCGAGTTTAGAGCCATTCAGAGTTATTCCACGCTCTCTCCAAAAATTTGTGAGTTTCCAATTCTTGTCCGGTCTAGATATTTTTAGATCTAACCCAATTTTTAGAATTATTAATTTTTTTATTGAATAATGAACTGGGTTTGGTTAGATAGGATTAATACGGGATCCCAATTATAAATTTTTCAATTAAAATAAATCTTATTAAACAAAGAAATGGGTTCAGTTGGTCGGGTTGAGACATTTTTGAGACTCGACCTAATCGTTCGAATTTTATAATTCTTTTTTACAAAACCAGGTTGGATTGAGTAAAATGTCCTTTCGACCCAACCCAATTATTGGAATGGACTATAAATTTTTTGAGTTGGATTGGTTCCGGTTATGCTTTCAATTTTAAAATAATTTTTTAACAAAAATAAAATTATATATTTACTTATTTTTAAACACGTTAATTACTCAATTTTAATATATATTTTGAACAATTACGTGCGTTACAAAAATTATTAATTTTTTTTTGAAGAATAAATAATCAAATAAAATTTAAAAACTTAATTTTAATATATATTTTTGTAAATACCTTCTAAATAATTAAAAAATATTTTAAGGAAGGTTTGAAAAATAAATAATTGAAATAAATTGAATAAATAAATAATTATGAAATTAAAAAATAAATCTTTATAAAATTTTAAGAAAAAAAATTAGAATTAATTGAATTTGTAATTCTTGTGGGCAGTAGTAAAAGAGGAAGGAGGTTCAAGTTCGAGCAACACCATCCCCGCCGCCACAGCGACGGCGCCGACAACGACGGCGGAATTTCCCGGCAAAGAGACAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCCGCCCGAGTCTGGCTCGGCACTTTCGACACCGCAGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGCAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCCACCCCTCATTTAGTTCCGTCTCCGGTGGTGCAGCCGCCGGTTTTCCCGCCGCAAGATGCTCTTGGAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGGTGACGTTTGACAGGGTGCTCTGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTCTTCTTCTGGTGCTTCGAATTTTGATTTGCCATTTGCCCAGCAGCAGATTGCATATTTCCGGCCGCCGGGAAATCAGAACCACGGCGGTGGGGATTCTTCGATGCCGCCGCCAACGGGATTGAGCTATCGTCCTCCCGCTACCGGTTGACGGTTTGTGATTGGACAGCTGAAATCTTTTAGCGGCCACGGTAACTGCCACGCAGATATTTAATATTTTCAAAAAAAAAAAAACAAAAACAA CCTTTTTCATGTGTCCATCCCCCCATGAATACCCTAGAGGTGTGAACCCAAGCTCCACTTCAAGAATATTAGCGGCCATACCCTGTTGGCGCCAAATCCCCCTTCTTCACTATTCCTATGGCGGCCACGCACGTTCTTCAAATTATATATAAATTATGAACACCCTTTAATCCAATCTCTTCAAATTAAGATTTTTGCCCTTGATTTCATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGCGGCGGCGGCAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGCTCATGCTTCTGGGGTTGGTTATTCGCCTTGTTCGGATGCTCCAGTGACGACGACAACGACAGCGGTGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGAGGATCGAGTTTAGAGCCATTCAGAGTTATTCCACGCTCTCTCCAAAAATTTTAGTAAAAGAGGAAGGAGGTTCAAGTTCGAGCAACACCATCCCCGCCGCCACAGCGACGGCGCCGACAACGACGGCGGAATTTCCCGGCAAAGAGACAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCCGCCCGAGTCTGGCTCGGCACTTTCGACACCGCAGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGCAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCCACCCCTCATTTAGTTCCGTCTCCGGTGGTGCAGCCGCCGGTTTTCCCGCCGCAAGATGCTCTTGGAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGGTGACGTTTGACAGGGTGCTCTGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTCTTCTTCTGGTGCTTCGAATTTTGATTTGCCATTTGCCCAGCAGCAGATTGCATATTTCCGGCCGCCGGGAAATCAGAACCACGGCGGTGGGGATTCTTCGATGCCGCCGCCAACGGGATTGAGCTATCGTCCTCCCGCTACCGGTTGACGGTTTGTGATTGGACAGCTGAAATCTTTTAGCGGCCACGGTAACTGCCACGCAGATATTTAATATTTTCAAAAAAAAAAAAACAAAAACAA ATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGCGGCGGCGGCAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGCTCATGCTTCTGGGGTTGGTTATTCGCCTTGTTCGGATGCTCCAGTGACGACGACAACGACAGCGGTGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGAGGATCGAGTTTAGAGCCATTCAGAGTTATTCCACGCTCTCTCCAAAAATTTTAGTAAAAGAGGAAGGAGGTTCAAGTTCGAGCAACACCATCCCCGCCGCCACAGCGACGGCGCCGACAACGACGGCGGAATTTCCCGGCAAAGAGACAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCCGCCCGAGTCTGGCTCGGCACTTTCGACACCGCAGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGCAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCCACCCCTCATTTAGTTCCGTCTCCGGTGGTGCAGCCGCCGGTTTTCCCGCCGCAAGATGCTCTTGGAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGGTGACGTTTGACAGGGTGCTCTGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTCTTCTTCTGGTGCTTCGAATTTTGATTTGCCATTTGCCCAGCAGCAGATTGCATATTTCCGGCCGCCGGGAAATCAGAACCACGGCGGTGGGGATTCTTCGATGCCGCCGCCAACGGGATTGAGCTATCGTCCTCCCGCTACCGGTTGA MCFLKVANHGGGGGGNGGGDDPEAMFSSEGELMAMVSALTHVISGGAAHASGVGYSPCSDAPVTTTTTAVTGCSRKREREEEGGRIEFRAIQSYSTLSPKILVKEEGGSSSSNTIPAATATAPTTTAEFPGKETTRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEFVTTLPPSSPPTPHLVPSPVVQPPVFPPQDALGDYLQYSHLIQNSGENSVQPAVTFDRVLCNSPFVNPNSLISSSGASNFDLPFAQQQIAYFRPPGNQNHGGGDSSMPPPTGLSYRPPATG
BLAST of CmaCh09G012870.1 vs. Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.2e-34 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 8.1e-30 Identity = 80/146 (54.79%), Postives = 96/146 (65.75%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-25 Identity = 76/161 (47.20%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 116.7 bits (291), Expect = 4.6e-25 Identity = 61/85 (71.76%), Postives = 65/85 (76.47%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.6e-25 Identity = 74/165 (44.85%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TrEMBL
Match: A0A0A0KBY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017030 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 4.6e-96 Identity = 211/328 (64.33%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TrEMBL
Match: A0A0C7KKK2_CUCSA (Ethylene-responsive transcription factor 114 OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 4.6e-96 Identity = 211/328 (64.33%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TrEMBL
Match: A0A072U850_MEDTR (AP2 domain class transcription factor OS=Medicago truncatula GN=MTR_6g037610 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 8.4e-42 Identity = 147/361 (40.72%), Postives = 187/361 (51.80%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TrEMBL
Match: B9H7U8_POPTR (AP2 domain-containing transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s21690g PE=4 SV=2) HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40 Identity = 151/391 (38.62%), Postives = 189/391 (48.34%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TrEMBL
Match: V7C1F7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G092100g PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39 Identity = 143/404 (35.40%), Postives = 185/404 (45.79%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TAIR10
Match: AT5G64750.1 (AT5G64750.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110) HSP 1 Score: 132.5 bits (332), Expect = 4.6e-31 Identity = 80/146 (54.79%), Postives = 96/146 (65.75%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TAIR10
Match: AT5G13330.1 (AT5G13330.1 related to AP2 6l) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26 Identity = 76/161 (47.20%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TAIR10
Match: AT1G43160.1 (AT1G43160.1 related to AP2 6) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26 Identity = 61/85 (71.76%), Postives = 65/85 (76.47%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26 Identity = 74/165 (44.85%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. NCBI nr
Match: gi|700190683|gb|KGN45887.1| (hypothetical protein Csa_6G017030 [Cucumis sativus]) HSP 1 Score: 359.4 bits (921), Expect = 6.5e-96 Identity = 211/328 (64.33%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. NCBI nr
Match: gi|778709855|ref|XP_004138542.2| (PREDICTED: ethylene-responsive transcription factor ERF110-like [Cucumis sativus]) HSP 1 Score: 359.4 bits (921), Expect = 6.5e-96 Identity = 211/328 (64.33%), Postives = 236/328 (71.95%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. NCBI nr
Match: gi|659126202|ref|XP_008463062.1| (PREDICTED: ethylene-responsive transcription factor ERF110-like [Cucumis melo]) HSP 1 Score: 337.4 bits (864), Expect = 2.7e-89 Identity = 205/337 (60.83%), Postives = 230/337 (68.25%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. NCBI nr
Match: gi|922352139|ref|XP_013451886.1| (AP2 domain class transcription factor [Medicago truncatula]) HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41 Identity = 147/361 (40.72%), Postives = 187/361 (51.80%), Query Frame = 1
BLAST of CmaCh09G012870.1 vs. NCBI nr
Match: gi|566172567|ref|XP_002306712.2| (AP2 domain-containing transcription factor family protein [Populus trichocarpa]) HSP 1 Score: 174.5 bits (441), Expect = 3.0e-40 Identity = 151/391 (38.62%), Postives = 189/391 (48.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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