CmaCh09G012160.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGGATCGGCCTCCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATGTGCTTTTCCGATTAGCAATAATATTGGGCAGTTGAAGGGCAAGAGAGAGAAAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGACGCGGAGGAGGCTTGTGAGCTTGTGAGTGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCACATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTTCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAAGTATGTTGTCTAATTTTATGCTCCCGTCCAGCTTTTTCATTATGATCCATATCTTAGTTATGAACCACAACTCTCCACAATAATATGATATTGCTCACTTTGACGCTTTCATAGTTTTACTTTGGGCTCCTAAAAAGACTCATGTGAGATGTATTCCTTACCTATAAGCACTTTAATCAGGCTTTTAATGTTTGCTCAACTTGAACTACAGTGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGGCTGTGGAAGACATAGGAGCAGCAACAAAATGGTTGGTTGATGAGTTTTTGGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTAGGGTTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACCAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGTACTGAGGTGAATCCATCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGACAACGACCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAAGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGGCAAGTGCATAGGTAATTAGGTAATAAATGAAGTAGCTAACTGGTGCTACTTGGGTTCCAACTCGCCTAAATGGGGGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGGATAACCCACCTAAAAGGGAGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGCTAATCCTATGTACGTATTTTTTAGGCTAAGCACTGACGGGATCTTTTCTACAAAATCATTGATGATAGACATGAAAGAAAAAAAACGTAGAAGCAAAAAATCTCACACTAACAAAGACAATATAGAAAGGACATCAACCTAAAAAAGTGAAGTTCAAAAAAGTGCTTAAACCTATT AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGGATCGGCCTCCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATGTGCTTTTCCGATTAGCAATAATATTGGGCAGTTGAAGGGCAAGAGAGAGAAAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGACGCGGAGGAGGCTTGTGAGCTTGTGAGTGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCACATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTTCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAATGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGGCTGTGGAAGACATAGGAGCAGCAACAAAATGGTTGGTTGATGAGTTTTTGGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTAGGGTTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACCAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGTACTGAGGTGAATCCATCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGACAACGACCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAAGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGGCAAGTGCATAGGTAATTAGGTAATAAATGAAGTAGCTAACTGGTGCTACTTGGGTTCCAACTCGCCTAAATGGGGGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGGATAACCCACCTAAAAGGGAGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGCTAATCCTATGTACGTATTTTTTAGGCTAAGCACTGACGGGATCTTTTCTACAAAATCATTGATGATAGACATGAAAGAAAAAAAACGTAGAAGCAAAAAATCTCACACTAACAAAGACAATATAGAAAGGACATCAACCTAAAAAAGTGAAGTTCAAAAAAGTGCTTAAACCTATT ATGGGATCGGCCTCCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATGTGCTTTTCCGATTAGCAATAATATTGGGCAGTTGAAGGGCAAGAGAGAGAAAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGACGCGGAGGAGGCTTGTGAGCTTGTGAGTGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCACATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTTCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAATGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGGCTGTGGAAGACATAGGAGCAGCAACAAAATGGTTGGTTGATGAGTTTTTGGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTAGGGTTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACCAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGTACTGAGGTGAATCCATCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGACAACGACCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAAGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGGCAAGTGCATAG MGSASAGAQWISAPPTGRSGRRMGIPFQPSFRCAFPISNNIGQLKGKREKKGGKVCYSAEGVKDEIDAEEACELVSGMELSIGEEAHHSITAHLFKAVKNNNGTAILLLTDLFSFQDSSVRDFAYRLACNGFNVLLPDVFHGDSCEEQKAVEDIGAATKWLVDEFLAAGISRKLGIVGFGYGGGRVIDVLAQDQGSYFSIGASLYGTEVNPSLATKVEVPVLLISGDNDPLCPVSVMKDLEKGMGEGSKLVIFGGRGHGFVHKPGSPEEDEDAEQAFLMLRNWLHDGLVATNIEASA
BLAST of CmaCh09G012160.1 vs. TrEMBL
Match: A0A0A0KT04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652280 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.7e-113 Identity = 215/308 (69.81%), Postives = 248/308 (80.52%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TrEMBL
Match: V4T3Z9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001943mg PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85 Identity = 160/253 (63.24%), Postives = 195/253 (77.08%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TrEMBL
Match: A0A061FKZ6_THECC (Alpha/beta-Hydrolases superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_036508 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 5.8e-85 Identity = 164/289 (56.75%), Postives = 211/289 (73.01%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TrEMBL
Match: B9IQE7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10780g PE=4 SV=2) HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84 Identity = 156/264 (59.09%), Postives = 199/264 (75.38%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TrEMBL
Match: A0A061FJU8_THECC (Alpha/beta-Hydrolases superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_036508 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 2.9e-84 Identity = 156/252 (61.90%), Postives = 199/252 (78.97%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TAIR10
Match: AT1G35420.2 (AT1G35420.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 268.5 bits (685), Expect = 5.0e-72 Identity = 126/242 (52.07%), Postives = 173/242 (71.49%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TAIR10
Match: AT3G23600.1 (AT3G23600.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 52.4 bits (124), Expect = 5.7e-07 Identity = 44/196 (22.45%), Postives = 89/196 (45.41%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. TAIR10
Match: AT3G23570.1 (AT3G23570.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06 Identity = 44/204 (21.57%), Postives = 80/204 (39.22%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. NCBI nr
Match: gi|449447627|ref|XP_004141569.1| (PREDICTED: uncharacterized protein LOC101210518 [Cucumis sativus]) HSP 1 Score: 417.2 bits (1071), Expect = 2.5e-113 Identity = 215/308 (69.81%), Postives = 248/308 (80.52%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. NCBI nr
Match: gi|659119499|ref|XP_008459689.1| (PREDICTED: uncharacterized protein LOC103498731 [Cucumis melo]) HSP 1 Score: 412.5 bits (1059), Expect = 6.1e-112 Identity = 219/309 (70.87%), Postives = 249/309 (80.58%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. NCBI nr
Match: gi|568838486|ref|XP_006473242.1| (PREDICTED: carboxymethylenebutenolidase homolog [Citrus sinensis]) HSP 1 Score: 326.2 bits (835), Expect = 5.8e-86 Identity = 161/253 (63.64%), Postives = 195/253 (77.08%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. NCBI nr
Match: gi|567884217|ref|XP_006434667.1| (hypothetical protein CICLE_v10001943mg [Citrus clementina]) HSP 1 Score: 323.2 bits (827), Expect = 4.9e-85 Identity = 160/253 (63.24%), Postives = 195/253 (77.08%), Query Frame = 1
BLAST of CmaCh09G012160.1 vs. NCBI nr
Match: gi|590603939|ref|XP_007020132.1| (Alpha/beta-Hydrolases superfamily protein isoform 3 [Theobroma cacao]) HSP 1 Score: 322.4 bits (825), Expect = 8.3e-85 Identity = 164/289 (56.75%), Postives = 211/289 (73.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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