CmaCh09G011710.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGTTTTGAAATCTTTGATACATTCATTGGGTGCACTTAGGCTTCCACAAACTACGTGGTGCGGTGAGATCGAAAGCTTTTGCTTTAAGAACGCATCATTGTTCTTCTGTACGGTGTCGAGCTCGTTTAAGCTTAATTCGAGGCCGAACCGGGTGCCATTGGAGATATTGGTGATGGATGAAGCTGCACAGTTGAAGGAGTGTGAGGCTGCAATTCCTTTGCAACTTTCTTTTATACATCATGCAATTCTTATAGGTGATGAGCGCCAATTGCCTGTTGTGGTTGAAAGCAAAGTAAGTAATTCTTTCTCAAACTAAATTTCATATTTTTCGTTAGCTCGTTAAATCATCAAGAATATTTCAACGGTTCTCTTACATGATACAACTTTCGTTTAATGAGTTTAAAAAGTATAACAGCCCAAGCCCATTATAAGCAGATATTGTCCTCTTTGAACTTTTCCCTTTTGGACTTCCCCTCAAGGTTTTTAAAATCTTTATAAGGAATGTTTAGTTCTCCTCCCCAACCGATATAGGATCTCACAATCCACCCCCTTCGGAGCCCAGCGTCCTCGTTGACACTTGTTTCCTTCTTCCAATCGATGTGGGACCCCCCAATTCACCTCCTTCGGGATCCAGTGTTCTTGTTGGCACACCGCCTCATGTCCACCCTCTTTGGGGCTCAGCTTCCATGCAGGCAAATCGCTTGGTGTCTTACTCTAATACCATTTGTAACGGTTCAAGCCCAGCGTTAACAAATATTGTCCTCTTTGGGTTTTTTTCTTTTGGGCTTCCCCTAAAAGTTTTTAAAACATGTCTTCTAGGGAGAAGTTTCCACATCCTTATAAGAAAGTTGACACTCGTTCCCTTCTTCCAATCGATGTGGGAACCCCAATCCACCTCTCTTCGAGGCCCAGCGTCCTTGCTGACACACTGCCTCGTGCTCACTCCCCCTCGAGGCTCAACCTCCTCGTTGATAGATCACTCGGTATCTGGCTTGGATACCATTTGTAACGGCCCAAGCCCACCACTAGATATTGTCCTCTTTGGGTTTTTTCCTTATGAGCTTTTTCTCAAAGTTTTTAAAATGCGTCTTCTAGAAAGAGGTTTTCATATCCTTATAAAGAATGCTTCGTATTCCTCCCCAACCGACGTGGGATCTCACAAAAACTTTATAATAAATCTCTTATTTGTTATGCTTCCCTTGTTTGTAAGGTTGCAGATTGTTAAAGATCACGTATTTTTTTAGATGGTAGTTAGTACCTGATTAAATCTCCTTATCCTTAGGAGTTCGATTTACTTTTGATTTGATTTGTTTACCAGTTTGTTTTTTGTTTTGATTTGATTTGTTTACTGGTTTGTTACCGAATTTTCTATCGATTTTTAGGTAGATTTTTTAAATATCTTTTTGTATTGTTTGTATATATATAGAGAGCATTTTTGCTCTTCATAATATAATTTTCTTATCAATCGTTCAATCACTCACTCTTTCACTAACAATTTGTATCAGAGCTATCTTCTTAAGGGACCTGTGAGATCAAAATGGAAGAGCTGTTGCACCACCTGTATTTGATGGAGACAATTATCAAATATGGGTAGTTCGTATGGAGACTTATTTGGAGGCCTTGGATCTTTGGGAAACAATAGAAGAGGATTACGAGGTCCCTCCACTTCTAGCAAATCCTACTGTATCACAAATCAAATTACAGAAGGAAAAAAGAAGACAAGGAAATCAAAGACGAAAGCTTGCCTATTTGCCGTTGTATCTCAAATGATCTCCATGCGAATAATGTCCCTCAAAACAACAAAGGAAATCTGGGATTATCTCAAGGTTGAATATGAAGGAGATGAGAGGATTCGTGGAATGAAAGTCCTGAATTTGATTAGGGATTTCGAGTTGCAGAAGATGAAGGAGTCTGAATCGGTGAAAGAGTACTCTGACAGACTTCTCAGCATTGCCAACAAGGTGAAATTGCTTTGTTATGTATAAAATGATTCCAGGATCGTTGAAAAGCTGCTAGTCACTATTCCAGAGAAGTTTGAAGTCACCATTACTACTCTGGAGAACACCAAAGACTTGTCAAAGATTTCTCTCACATAGCTCTTGAATGTTTTACAACCACAGGAGCAAAGGAGGTCTATGAGGCAGGAAGGGGTGATTGGAGGTGCCTTACCTATTAAGCATCAAGACAACAACAGGTATAAAAACAAGAAATTTTTCAAAAACCAATAGACAAATGGAGATTCATTTGTCAATTATCAGAAGACAAAAGGAGGAGGTTCCAAAAAATCCTATCCACCTTGCCGCCATTGTGAGAAGAAAGGTCATCCACCATACAAGTGTTGGAGAAGACCTGACACCTTCTGCTCTAAATGCAATCAACTTGGACATGAAGCTATGATCTGCAAAGCCAAAGATCAGATGAAAGAAGTAGATGCACAGATAGTTGATCAAGAAGAAGATCAATTATTTGTGGTCATTTGTTTCTCAGGCAAAGAATCAAACGAGAGCTGGTTGATTGACAGTGAGTGCACAAATCATATGACATATGACAAAGAGTTTTTTGAGGAATTAAGAGACACTGAATTCGAGAGTGAGGATTGACAATGGTGAACACTTTAAAGTCAAAGGAAAAAGCACAGTAGCTATAATATGTTATAAAGGTACAAAATTTATTCCAGATGTTTTATTTGTACCTAAAATTGATCAAAATCTCTTTAAGTGTTGGTCAGTTACTTGATAAATGCTATAAAGTGTTGTTTGAGAATAAGCCGTGCTTGATCAAAGATGTTAGTGGCAAAGACTTGTTAAATGTCAAAATGAAAGGAAAAAACTTTGCTCTAAATCCGATGGAAAAAGAGCAGATGACTTTTATATCCAGAGCTAGTGCCACTGAGATTTGGCACAAAAGACTTGGGCATATTCATCATCGAGATTTGCTTCATATGCAGTTAAAGAAGCTGGTAGAAGGACTCGCTAACATTGATGATGACATGCCTCCTTGTCGTGCTTGTAATTTTGGGAAGCAACATAAGCAACCCTTTCCTAAATAGGCATGGAGAGCCTCGAAAAAACTGCAGCTGGTTCATACTGATCTTTGTGGTCCTCAGCGAACACCATCATTAAATGGTAATCTTTATTACATTGTTTTTATTGATGATCTAACAAGAATGTGTTGGATCTTCTTGCTAAAGAAAAAGTCAGAAATTGCGGGGGGTTTTTTGGAATCAAAGCCAGAGTTGAGAATGAAAGTGCATGCTTGATTCAGATGGTAAGATCAGATAATGGCAAGGAGTACACTTTATAAACTTTTAACAGGTTTTGTGAAGAGGCTGGAATTGAACATCAGTTAACAACACCATACACTCCTCAACAGAATGACGTTAGTGAAAAGAGGAATAGATTCATAATGAAGATGACGAGATGCATGCTTCATGAGAAGGATCTTCCAAAACGTTTTTGGGGAAAAACAGCAAACACTATTATGTGCTTGCAAAATCAAATTTCAACAAAAGTTGTGAAGGACTTGACGCCATTTGAAGTCTGGTATGGTTACAAACCTTCTTTAAAGTTGAGTATTTAGGTGTCTTTGCTTCACTTACATTCCACCGGTCAAAAGTTGGCATCTTTGTTGGGTATAGCACTATATCCAAAGCTTACAGAGTTTTTCAGCCACACACTAGTCGTGTTATTGTGAGTCGAGATGCTAATTTTGCTGAAAATGAGCAATAGAATTTAGAAGAATTGACGAAGGTGCATCAGATTTCTAATGCACCAAACAATTTAATGTTTGGTAGCATGTTAGAAGAGTCTGAAGATGAATGACAAGAAGAGTCTAAATATGAACGACAAGATGTTTTGGTTGATGATGCAGCTGTAAGAGGAGGAGCTTTCAGTGATCAAGAAAAACAAAATCTAGGAGTTGTTTGATCGACCTCTAAATAGAGAGATAATTGGAGTAAGATGGGTGTTCAGAAAAAAGCTTGGAGTTCACGGTATCTAAATAAGAATTATTAAAGATCACGTATTTGTTTAGATTGCTGTCAGTTAGTATCTGATTAAATCACTTTATCGTTAGGAGTTCGATTTAGTTTTGCTTTGATTTGTTTACTGGTTTGTTACTAGATTTTCTGTCGATTTTTAGGTAATTTTTCTAAATATCTTTTTGTATTGTTTGTATATTATAGAGAACATTTTTACTCTTCATAATATAATCTTCTTATCAACCATTCACTCACGGCTAATGAAGCCAATTTTGGGAGAAGCTTGTTTAAGAGGCTAAGCTCATTGGGCCATCATACAGAATGCATCCATACTCAAACTTCTACCGAGGCTAAGCTCATTGTATGATGATGAGTTCCATATTGCATCATGTCGATAGACTAACATAAGACACCACCCTAAGAGCATGAAAATGATATTAATATAAAGATCCACGAGCATATGTTACTTAGAGTAACAAAGAGATAAGACTAGAGGGTTGTTTCAGAAGAGACGCTATGATGAGATTTAGAGGGACTTCATGCATATTGCATGTTCATAAGCATAGAGGGCTACTTCCCCTAGAGATGATGAGTGCGAATGCGCACGGTATGGAAGATATCATTGAATAGTTCTCATAAGCTAATCGTTCTACACTTTATAGTTCGTGTATCGTGTTATATACGTCACGAGCGGGAATTGGGTATCTAAATTCTTAGATGCTTATTCTTTTTCCTCTTTGATATGTTTTGCAGCATGTGTTGACTCAAAAGAGAATATTAACATTGGGGTGATCTCACCTTATTCAGCTCAAGTAGCTGCCATTCAAAACAAAATTGGGTGTAATTACAATAATTATAGTAACTTTAAGGTTATAGTGAGCTCAATTGATGGATTTCAAGGTGGCGAGGAGGACATCATTGTCATTTCTACCGTGCGATCAAATAGAGGCTCGTCGATTGGATTTTTATCCAGTAATCAAAGAACAAATGTCATTCTTACTCGAGCCAGGTAACAATTACTGATACTATTTTTTTTTTTTTTGTACTTCTTTTTTTACTTGTTTGTGTGATTTCAGAATATCGAATCGATAACAAAGGCATATATAGATATTGTTTATGGATATTGGGGAACTTCACAACACTATCAAGTTGTGATTCCATATGGGAAGAGTTGGTTTTTTTATGCCAAGAACCGTGGTTGTTTCTTCCAAGCTGATGAAGATAAGGACTTGGCCAATGTTATGTCCATTTGGAAGGTACCATTTTTAAGCCTTTTTTTTTTTTTTGTCCTCTCACAATAATCACACTACATTTATATGTTCTTGTTTTGATTGTTTAGATGGATGAGGAGAGACGTGTCGATGATTTAACGACCGTAGATTCAAGCAATTTACGAAAAACGAGTCGTTTGAAGCCTGAAAATAGGAACAAGGGTGCACTAGTGATGCGTTTTTCGGGATCAATTACTTGCATTGCCTTCAATCTAACATCCAAGCCTTGATGAACTCATCCAAGGAGGAAGAAGATGGAAGGAAATTTGAACCTTTTCTTTTTGATCGGGTTTCAAGGTTTAGAATTAGGGTTTTGATCATCGTTAAAGGGTTCTTCAGACACGTACTTAAGGCTTTTATGGCTTCTTTGTTTTTTAGTTCTAGCTATGTCAAGTTAAACCTCGAGAACCATGTATCGATATCTCTGGCAACCTTACATTTTTTAAGATTGGTGAAGGTTTTAAAGTTAATTGGTTTGGATTTTTTTAGAAGTTTTATATAGGTGGTAGTGTTATGGAGTTTTATTGAGGTGGATTTGGAGAGAACTTCTTAA ATGTTGGTTTTGAAATCTTTGATACATTCATTGGGTGCACTTAGGCTTCCACAAACTACGTGGTGCGGTGAGATCGAAAGCTTTTGCTTTAAGAACGCATCATTGTTCTTCTGTACGGTGTCGAGCTCGTTTAAGCTTAATTCGAGGCCGAACCGGGTGCCATTGGAGATATTGGTGATGGATGAAGCTGCACAGTTGAAGGAGTGTGAGGCTGCAATTCCTTTGCAACTTTCTTTTATACATCATGCAATTCTTATAGGTGATGAGCGCCAATTGCCTGTTGTGGTTGAAAGCAAAGTAACATGTGTTGACTCAAAAGAGAATATTAACATTGGGGTGATCTCACCTTATTCAGCTCAAGTTATAGTGAGCTCAATTGATGGATTTCAAGGTGGCGAGGAGGACATCATTGTCATTTCTACCGTGCGATCAAATAGAGGCTCGTCGATTGGATTTTTATCCAGTAATCAAAGAACAAATAATATCGAATCGATAACAAAGGCATATATAGATATTGTTTATGGATATTGGGGAACTTCACAACACTATCAAGTTGTGATTCCATATGGGAAGAGTTGGTTTTTTTATGCCAAGAACCGTGGTTGTTTCTTCCAAGCTGATGAAGATAAGGACTTGGCCAATGTTATGTCCATTTGGAAGATGGATGAGGAGAGACGTGTCGATGATTTAACGACCGTAGATTCAAGCAATTTACGAAAAACGAGTCGTTTGAAGCCTGAAAATAGGAACAAGGGTGCACTAGTGGTAGTGTTATGGAGTTTTATTGAGGTGGATTTGGAGAGAACTTCTTAA ATGTTGGTTTTGAAATCTTTGATACATTCATTGGGTGCACTTAGGCTTCCACAAACTACGTGGTGCGGTGAGATCGAAAGCTTTTGCTTTAAGAACGCATCATTGTTCTTCTGTACGGTGTCGAGCTCGTTTAAGCTTAATTCGAGGCCGAACCGGGTGCCATTGGAGATATTGGTGATGGATGAAGCTGCACAGTTGAAGGAGTGTGAGGCTGCAATTCCTTTGCAACTTTCTTTTATACATCATGCAATTCTTATAGGTGATGAGCGCCAATTGCCTGTTGTGGTTGAAAGCAAAGTAACATGTGTTGACTCAAAAGAGAATATTAACATTGGGGTGATCTCACCTTATTCAGCTCAAGTTATAGTGAGCTCAATTGATGGATTTCAAGGTGGCGAGGAGGACATCATTGTCATTTCTACCGTGCGATCAAATAGAGGCTCGTCGATTGGATTTTTATCCAGTAATCAAAGAACAAATAATATCGAATCGATAACAAAGGCATATATAGATATTGTTTATGGATATTGGGGAACTTCACAACACTATCAAGTTGTGATTCCATATGGGAAGAGTTGGTTTTTTTATGCCAAGAACCGTGGTTGTTTCTTCCAAGCTGATGAAGATAAGGACTTGGCCAATGTTATGTCCATTTGGAAGATGGATGAGGAGAGACGTGTCGATGATTTAACGACCGTAGATTCAAGCAATTTACGAAAAACGAGTCGTTTGAAGCCTGAAAATAGGAACAAGGGTGCACTAGTGGTAGTGTTATGGAGTTTTATTGAGGTGGATTTGGAGAGAACTTCTTAA MLVLKSLIHSLGALRLPQTTWCGEIESFCFKNASLFFCTVSSSFKLNSRPNRVPLEILVMDEAAQLKECEAAIPLQLSFIHHAILIGDERQLPVVVESKVTCVDSKENINIGVISPYSAQVIVSSIDGFQGGEEDIIVISTVRSNRGSSIGFLSSNQRTNNIESITKAYIDIVYGYWGTSQHYQVVIPYGKSWFFYAKNRGCFFQADEDKDLANVMSIWKMDEERRVDDLTTVDSSNLRKTSRLKPENRNKGALVVVLWSFIEVDLERTS
BLAST of CmaCh09G011710.1 vs. Swiss-Prot
Match: HCS1_YEAST (DNA polymerase alpha-associated DNA helicase A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HCS1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TrEMBL
Match: A0A0A0K7S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G276680 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 6.1e-49 Identity = 120/203 (59.11%), Postives = 136/203 (67.00%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TrEMBL
Match: A0A0K9QAT4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_207510 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.1e-33 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TrEMBL
Match: A0A0K9Q8M4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_207510 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.1e-33 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TrEMBL
Match: F6HG18_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01850 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.8e-32 Identity = 114/272 (41.91%), Postives = 154/272 (56.62%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TrEMBL
Match: A0A103YGI2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012940 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29 Identity = 108/275 (39.27%), Postives = 148/275 (53.82%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TAIR10
Match: AT1G65810.1 (AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TAIR10
Match: AT4G05540.1 (AT4G05540.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15 Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TAIR10
Match: AT1G65780.1 (AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 78.2 bits (191), Expect = 8.8e-15 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TAIR10
Match: AT5G37140.1 (AT5G37140.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-14 Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. TAIR10
Match: AT5G37150.1 (AT5G37150.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 74.7 bits (182), Expect = 9.7e-14 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. NCBI nr
Match: gi|700189149|gb|KGN44382.1| (hypothetical protein Csa_7G276680 [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 8.7e-49 Identity = 120/203 (59.11%), Postives = 136/203 (67.00%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. NCBI nr
Match: gi|720093338|ref|XP_010246019.1| (PREDICTED: uncharacterized protein LOC104589402 isoform X2 [Nelumbo nucifera]) HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38 Identity = 125/294 (42.52%), Postives = 163/294 (55.44%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. NCBI nr
Match: gi|902105041|gb|KNA03606.1| (hypothetical protein SOVF_207510 isoform B [Spinacia oleracea]) HSP 1 Score: 149.4 bits (376), Expect = 8.8e-33 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. NCBI nr
Match: gi|902105040|gb|KNA03605.1| (hypothetical protein SOVF_207510 isoform A [Spinacia oleracea]) HSP 1 Score: 149.4 bits (376), Expect = 8.8e-33 Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 1
BLAST of CmaCh09G011710.1 vs. NCBI nr
Match: gi|659123169|ref|XP_008461528.1| (PREDICTED: uncharacterized protein LOC103500100 [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30 Identity = 93/169 (55.03%), Postives = 107/169 (63.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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