CmaCh09G010360.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATGTCGCCCAGAAAATGGATAACGCATTACAGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACATGGTTGCCACTTCTCTCGACTCCGAAGGTACTTTATTCTTGAACAATATCCTTCCTCGACTTTTAAAAAACCATCATTTTGATCTCTGTTATGTTGCTGTTGCTGTTTCTTTACCTTCAATTTGTTTTGCTTAATCTTCATGAAGAATTTATTAAGCTTCAAATCATATTTGTACTTAATATGTTATTATATATACTCGAAGTTAAAATTATATCAATAGTTCTAGAGACCAAAGTAGTCATTTTCTTAGAAAATTCAAAGATCAATATTGTGAGATTCAATGTTGGTTGGGGAGGAGAATGAAATATTTTTTATAAAAGTGTGAAAATCTCTCTCTATCATATGTGTTTTAAAAACTTTGAGAGAAACCCTGAAAGGAAAAGCTCAAAGATGACAATATTTGATAGCGGTAGACTTGAGCCGTTACAAATATAAGCATTTTAAAATGTTTGGGAGCTAATATAGAATAAATGTGAAAGTTTAAGGATCAAAATGAAATGTACTTCCAGAAAGAGAAGCACAAGCGTTGGGCCCCCTTCATTAGAGTTCCGAAGGGTGGATCGAATTGAGTCCCTTTTGTCCAGTGGTTAGGACATCGTCTTTTCATGTCGAAGACATGGGTTCGATTCCCGTAAGGGATAGGTGCTCATTCTCGGCCACTTTTTCTTAGTGTGAATTGCTGAGTGATCGCTTGCTATCTGGCTAGAAAAGGTGGTTTGGAAGCTTCCTCTCTTCCAGCAAGTAAGACGAGATCACCACTTTTCTAAGTAATAGACTTCCTTTTATTCTTCCTTACTTAGCCTTAGATGTCCTTTCATAGATTCTCGAACTTTCAACAGACGAAATCTCTATGCATGCGTTCTTTCTTTCCACATCTCTTTTGGCCGAAACAATAAGATTTAGTTACCCTAACAACTAATATAGTCGAAGACCTAACAACATAGTTGTGATAATTTCTTCAACATAGTCGAATACTTTGACAACCAACAATCAGATTTATAATTGCCCTTAATTACCAAAGATTAATAAGACTTTTTGGGGGACCAAAATAGGATTTAAACTTAGTAGTTGCATGTTTTATAAGGTTGTCCTAATTCTGTGTCTTAAAATCTAACCTTTTTGTGTTGGTTTTGGTGTTTGTTTGTTTGTAAATAATTCAATAAATTTTGAAAAGAGACACTGTTGAGGAAGTACGGTTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATACATGGGGTGGACGTAGCGACAATGAGCCAACACCTACTTCTCTGTCACACCTGGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCCAGAGAACATGAAACCGGACAAATCAAGTAAGTACATATTCCCAGAAAATTATTGTTTTTTCTTTTTTTCTGATAATTATTGTTTTTTGCAAATGGGTTGACTTGAGGTATGAGAAAGTGAGACGATCTCCTCAAGTTATATAGGCTTGGGAGATCGTTTTTGAACTAGTTTAGCCTTTGAACCTTTCTGTTTATTGTCATAGGTTCATAAAATTTCAACATTGTTTAGTAAGAATTCTTAACAAGTCTTCCAACAGTCAACTTTGCGATCGTTTTCAAACCAGTTTAGCCTTTTTTAACTTTTCCATTTATCGTCATGGTTCATATAATTTCAATGTTTAGTAGGAATTCTTATTAAGTCTTCAAACAGTCAATTTTGTGATCGTTTTTAAATCAGATTAGCCTTTGAACTTTCCTATTTATTGTCACATGTTCATATAATTTCATCGTTGTTTAGTAGTAATTTTTAATAAGTCTTTGATTGATTAACTTTGCATCTAAACGAGTTTTGACATATTTGATCTTTTAAGTTCAAGAACTTATTTTACAAGAATTTTAAATGGTTGCAAACCACGACTCTCCACAATAGTATAATATTATCTATTTTGAGAATAAAACTTTCATGGATTTACTTTTCGTTTCTCCAAAAGACCTTGTACCAATGAAAATGTTTTCCTTTCTTATAAATTCATGATCATCCTCTTAATTATTTGATGTTGGGCTCCTCTCCCAACCATCCTCTTAAAAGTATCTAGTAAGTCCTTAAGCTTTCTATAACATTTATATGTGATTTGTGCCCGGGTTTTGCTTTTTGGTATATAACAGACTCCACCAGAATCTAGTGAGAAGCTTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGAAATTCACATAACCCACAAGATTTCATATCCTTACAGTGAGTGGAAGATTGAGAAAATTGCAGAAGAAGAGGGTTTATTTTTAAGAGAGGAAGTAGAGTTCGATAAATGGGATTATCCATGTTATGACAATAAGAAAGGCAGTGGGCCAAACAGCAACCGCACCTTCCCTGTTGGACTATGCTGCACTTTCAAGTTTGTGAAAACACTGTCAAGGAGGGAGAGGAGGTTGGCCACGGTTGCTGAATTTGCAAAACTCAACTTATCTATGAGTTAAGGTGGTTTGAGTCGAGAATTTTTAGTTTCGTCCCTATAATTTTGGAAGCATTAGGCTTTTGTTGGTATTCGATCCTTTGTAATTAAGGTCGAGATTAGAAAAGACATGGGTGATTGCTTTGTCTGGTATAAGCGTGTAATAGAAGAGTTGTTTTTGGTGATAGGTCTATTATAAGCAATATTGTATCTCACTCGTAATAGCTATAAGATTAGATTCTAAATTGAG ATGGGAATGTCGCCCAGAAAATGGATAACGCATTACAGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACATGGTTGCCACTTCTCTCGACTCCGAAGAGACACTGTTGAGGAAGTACGGTTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATACATGGGGTGGACGTAGCGACAATGAGCCAACACCTACTTCTCTGTCACACCTGGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCCAGAGAACATGAAACCGGACAAATCAAACTCCACCAGAATCTAGTGAGAAGCTTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGAAATTCACATAACCCACAAGATTTCATATCCTTACAGTGAGTGGAAGATTGAGAAAATTGCAGAAGAAGAGGGTTTATTTTTAAGAGAGGAAGTAGAGTTCGATAAATGGGATTATCCATGTTATGACAATAAGAAAGGCAGTGGGCCAAACAGCAACCGCACCTTCCCTGTTGGACTATGCTGCACTTTCAAGTTTGTGAAAACACTGTCAAGGAGGGAGAGGAGGTTGGCCACGGTTGCTGAATTTGCAAAACTCAACTTATCTATGAGTTAAGGTGGTTTGAGTCGAGAATTTTTAGTTTCGTCCCTATAATTTTGGAAGCATTAGGCTTTTGTTGGTATTCGATCCTTTGTAATTAAGGTCGAGATTAGAAAAGACATGGGTGATTGCTTTGTCTGGTATAAGCGTGTAATAGAAGAGTTGTTTTTGGTGATAGGTCTATTATAAGCAATATTGTATCTCACTCGTAATAGCTATAAGATTAGATTCTAAATTGAG ATGGGAATGTCGCCCAGAAAATGGATAACGCATTACAGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACATGGTTGCCACTTCTCTCGACTCCGAAGAGACACTGTTGAGGAAGTACGGTTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATACATGGGGTGGACGTAGCGACAATGAGCCAACACCTACTTCTCTGTCACACCTGGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCCAGAGAACATGAAACCGGACAAATCAAACTCCACCAGAATCTAGTGAGAAGCTTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGAAATTCACATAACCCACAAGATTTCATATCCTTACAGTGAGTGGAAGATTGAGAAAATTGCAGAAGAAGAGGGTTTATTTTTAAGAGAGGAAGTAGAGTTCGATAAATGGGATTATCCATGTTATGACAATAAGAAAGGCAGTGGGCCAAACAGCAACCGCACCTTCCCTGTTGGACTATGCTGCACTTTCAAGTTTGTGAAAACACTGTCAAGGAGGGAGAGGAGGTTGGCCACGGTTGCTGAATTTGCAAAACTCAACTTATCTATGAGTTAA MGMSPRKWITHYSSSHDILLVGEGNFSFSACLASAFGTATNMVATSLDSEETLLRKYGSDIKTTLEELKELGCSVIHGVDVATMSQHLLLCHTWFDRIVFNFPHAGFQYSREHETGQIKLHQNLVRSFLRNAKELLAENGEIHITHKISYPYSEWKIEKIAEEEGLFLREEVEFDKWDYPCYDNKKGSGPNSNRTFPVGLCCTFKFVKTLSRRERRLATVAEFAKLNLSMS
BLAST of CmaCh09G010360.1 vs. Swiss-Prot
Match: Y4648_ARATH (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana GN=At4g26485 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 8.5e-53 Identity = 112/205 (54.63%), Postives = 141/205 (68.78%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. Swiss-Prot
Match: BMT5_SCHPO (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bmt5 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 6.4e-16 Identity = 57/184 (30.98%), Postives = 98/184 (53.26%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. Swiss-Prot
Match: FDXA1_MOUSE (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus GN=Fdxacb1 PE=2 SV=2) HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11 Identity = 62/206 (30.10%), Postives = 94/206 (45.63%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. Swiss-Prot
Match: FDXA1_HUMAN (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens GN=FDXACB1 PE=1 SV=3) HSP 1 Score: 66.6 bits (161), Expect = 4.0e-10 Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. Swiss-Prot
Match: BMT5_YEAST (25S rRNA (uridine(2634)-N(3))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BMT5 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.4e-08 Identity = 55/225 (24.44%), Postives = 95/225 (42.22%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TrEMBL
Match: A0A0A0K8J5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193710 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.6e-66 Identity = 133/193 (68.91%), Postives = 153/193 (79.27%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TrEMBL
Match: B9I0H7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s14510g PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.9e-59 Identity = 116/205 (56.59%), Postives = 153/205 (74.63%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TrEMBL
Match: A0A0A0K734_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G193720 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59 Identity = 120/200 (60.00%), Postives = 149/200 (74.50%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TrEMBL
Match: V4UII5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010347mg PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 9.5e-59 Identity = 115/203 (56.65%), Postives = 147/203 (72.41%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TrEMBL
Match: A0A022QFM8_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a017711mg PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58 Identity = 117/204 (57.35%), Postives = 142/204 (69.61%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TAIR10
Match: AT1G55790.1 (AT1G55790.1 Domain of unknown function (DUF2431)) HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49 Identity = 95/199 (47.74%), Postives = 135/199 (67.84%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TAIR10
Match: AT5G56060.1 (AT5G56060.1 Domain of unknown function (DUF2431)) HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47 Identity = 98/189 (51.85%), Postives = 129/189 (68.25%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TAIR10
Match: AT5G56075.1 (AT5G56075.1 Domain of unknown function (DUF2431)) HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40 Identity = 93/206 (45.15%), Postives = 132/206 (64.08%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TAIR10
Match: AT4G26485.1 (AT4G26485.1 Domain of unknown function (DUF2431)) HSP 1 Score: 151.4 bits (381), Expect = 7.0e-37 Identity = 84/171 (49.12%), Postives = 111/171 (64.91%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. TAIR10
Match: AT5G25030.1 (AT5G25030.1 Domain of unknown function (DUF2431)) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36 Identity = 84/209 (40.19%), Postives = 123/209 (58.85%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. NCBI nr
Match: gi|659094513|ref|XP_008448101.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 2.1e-88 Identity = 171/237 (72.15%), Postives = 193/237 (81.43%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. NCBI nr
Match: gi|700188878|gb|KGN44111.1| (hypothetical protein Csa_7G193710 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 5.1e-66 Identity = 133/193 (68.91%), Postives = 153/193 (79.27%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. NCBI nr
Match: gi|747095837|ref|XP_011095813.1| (PREDICTED: uncharacterized protein At4g26485-like [Sesamum indicum]) HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64 Identity = 125/202 (61.88%), Postives = 152/202 (75.25%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. NCBI nr
Match: gi|645239580|ref|XP_008226195.1| (PREDICTED: uncharacterized protein At4g26485-like [Prunus mume]) HSP 1 Score: 247.3 bits (630), Expect = 2.6e-62 Identity = 124/202 (61.39%), Postives = 153/202 (75.74%), Query Frame = 1
BLAST of CmaCh09G010360.1 vs. NCBI nr
Match: gi|659094511|ref|XP_008448100.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 2.6e-62 Identity = 126/209 (60.29%), Postives = 155/209 (74.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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