CmaCh09G010250.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G010250.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RING/U-box superfamily protein
Location	Cma_Chr09 : 5266679 .. 5268407 (+)
Sequence length	1532

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGAGATGGCGCTACGGCGTTGGATGCCATCCCCCCTTCTTTCTGGGTTAAAACAGCCATGAAAGTATCTAGAGCCAGATGGTTTATTTTCTTGAGAAGAGTTTTCCATTACCAAAACGGATCGAGATCTGATCTCGGGCCAAATCCTTTTGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGATTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGTATCGTTATCGTTATCGAATCCAGGGAGATGGGAACAGTATTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTAATCATCATCAACATGCTAATGTCCTCTTAATTGATTTTGAGCTGGAATCGTAACCATGAAATGTACTTTATTACCTCTAATCTGACTTTTGTTGAACATAATTCAGGTACTCACATTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGAAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATATCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCAAGCAGTCCACGCCGACATCAACCCCAAAAGTCGACCCGATAACAGCCATACGGGACTTCCAAAAGACGACCCAGTAAGTAATCTTTCTTTTGCTGGTATAGGAAGCACTACAGAAGGAAACACGGAATTAAAATACCTTCGTTTTGCCTTTGATTTTTCAGGAATGTTGCATTTGCCTTGCTAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTAAGCAACAACTTCAGAGATAAGAGAGCCAAGAAAGCAGCCGTTGATGAAATTCGGGGGAAAAATGGAACCGGTCACTATATTGGGGGCGAGACATGACCTTGACCACGACTGAAGATTTGAGTACCGTTGAAAAGACCAAAGGAATGGGGGAATGACTTACCTGTAATAAAGTACAGGCTAATACGAGCCGATTGGAAGAAGGAAGGCTTAGATTACCGAATCTTGGACAATCTTCTTAGAGAGAGCCCCTTGCGTCGCCTTTTCTCGTTTTCTCGTTTAGATTAGAGTCTCCCATGGTTAGGTTACTTGAGTGAGTTCTAGTGCTCACCAGTTACCTAAATATACTGAAATATTGAATGATACATATAGTAGGAAATTGATGCCATATGTGTAGATATTATGAGAACTATAGTATTTGTCTAATGAATACAAACCAAGTGTGCTTTTTCCCACTTTATGCCTCAGAACTTTTTAGTTACACCTATGGACGGGCTCCCCGTCCCCGTCCCCGACATGATTAGCT

mRNA sequence

ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGAGATGGCGCTACGGCGTTGGATGCCATCCCCCCTTCTTTCTGGGTTAAAACAGCCATGAAAGTATCTAGAGCCAGATGGTTTATTTTCTTGAGAAGAGTTTTCCATTACCAAAACGGATCGAGATCTGATCTCGGGCCAAATCCTTTTGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGATTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGTATCGTTATCGTTATCGAATCCAGGGAGATGGGAACAGTATTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTACTCACATTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGAAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATATCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCAAGCAGTCCACGCCGACATCAACCCCAAAAGTCGACCCGATAACAGCCATACGGGACTTCCAAAAGACGACCCAGAATGTTGCATTTGCCTTGCTAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTAAGCAACAACTTCAGAGATAAGAGAGCCAAGAAAGCAGCCGTTGATGAAATTCGGGGGAAAAATGGAACCGGTCACTATATTGGGGGCGAGACATGACCTTGACCACGACTGAAGATTTGAGTACCGTTGAAAAGACCAAAGGAATGGGGGAATGACTTACCTGTAATAAAGTACAGGCTAATACGAGCCGATTGGAAGAAGGAAGGCTTAGATTACCGAATCTTGGACAATCTTCTTAGAGAGAGCCCCTTGCGTCGCCTTTTCTCGTTTTCTCGTTTAGATTAGAGTCTCCCATGGTTAGGTTACTTGAGTGAGTTCTAGTGCTCACCAGTTACCTAAATATACTGAAATATTGAATGATACATATAGTAGGAAATTGATGCCATATGTGTAGATATTATGAGAACTATAGTATTTGTCTAATGAATACAAACCAAGTGTGCTTTTTCCCACTTTATGCCTCAGAACTTTTTAGTTACACCTATGGACGGGCTCCCCGTCCCCGTCCCCGACATGATTAGCT

Coding sequence (CDS)

ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGAGATGGCGCTACGGCGTTGGATGCCATCCCCCCTTCTTTCTGGGTTAAAACAGCCATGAAAGTATCTAGAGCCAGATGGTTTATTTTCTTGAGAAGAGTTTTCCATTACCAAAACGGATCGAGATCTGATCTCGGGCCAAATCCTTTTGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGATTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGTATCGTTATCGTTATCGAATCCAGGGAGATGGGAACAGTATTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTACTCACATTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGAAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATATCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCAAGCAGTCCACGCCGACATCAACCCCAAAAGTCGACCCGATAACAGCCATACGGGACTTCCAAAAGACGACCCAGAATGTTGCATTTGCCTTGCTAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTAAGCAACAACTTCAGAGATAA

Protein sequence

MIHSGFFLSGPSLNSDATTSFISIPVSGGDGATALDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR

Homology

[Close]

BLAST of CmaCh09G010250.1 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 80/261 (30.65%), Postives = 136/261 (52.11%), Query Frame = 1


Query: 97  ISVITLAISQIERPVWPMRLWIGGYDLGCVLSL--LVLYGRHRYRYRYRIQGDGNSISDI 156
           I V  L +S+ E+P  P+R+W+ GY + C L +  + +  R R R R+   G G+ +++ 
Sbjct: 123 IGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNS 182

Query: 157 EHEQQRS----NESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLL 216
             +Q  S     +    S+      ++  +F  IW+++G  WV          +P+L+ L
Sbjct: 183 SSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWL 242

Query: 217 CSFLLVWNII----CYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPY 276
           C   L +++     C +   ++ L +CCC+P I +++ Y +   + ++GA  + I Q+P 
Sbjct: 243 CIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASKNDIDQMPK 302

Query: 277 WRYQAVH--ADINPKSRPDNSHTG--------LPKDDPECCICLAKYIDKEEVRQLPCSH 336
           +R+        ++ K+R   +  G        L  +D ECCICL +Y D  E+R+LPC+H
Sbjct: 303 FRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNH 362

Query: 337 VFHLKCVDKWLAIASSCPLCK 338
            FH  C+DKWL I S CPLCK
Sbjct: 363 HFHCTCIDKWLHINSRCPLCK 379

[Close]

BLAST of CmaCh09G010250.1 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-27
Identity = 84/302 (27.81%), Postives = 147/302 (48.68%), Query Frame = 1


Query: 84  MVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLL---VLYGRHRYRY 143
           +V++ V  L  ++++   L +S  E P  P+R+WI GY L C++ ++   V Y R   R 
Sbjct: 75  VVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRR 134

Query: 144 RYRIQ-----GDGNSISDIEHEQ----------------QRSNESSRYSHLMNKCRTSLD 203
           R  +         +S S ++ E+                Q  NE++ ++  +    T + 
Sbjct: 135 RRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMIS 194

Query: 204 LFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNII----CYSFPFILFLLLCCC 263
               IW+V+G  WV        + +P+L+ LC   L +++     C +   ++ + +CCC
Sbjct: 195 F---IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCC 254

Query: 264 VPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAV-----HADINPKSRPDNSHT--- 323
           +P I +++ Y +   + ++GA  + I QL  ++++ V     H     + + D+      
Sbjct: 255 LPCIIAVL-YAV---AEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTE 314

Query: 324 ---------GLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQ 341
                     LP +D ECCICL+ Y D+ E+R+LPC H FH  CVDKWL I ++CPLCK 
Sbjct: 315 CGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKY 369

[Close]

BLAST of CmaCh09G010250.1 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-25
Identity = 81/302 (26.82%), Postives = 145/302 (48.01%), Query Frame = 1


Query: 84  MVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYR 143
           +V+++V  L  + ++   L +S+ E P+ P+R+W+ GY L CVL ++ +   +R R R R
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160

Query: 144 IQ-------------GDGNSISDIEHEQQRSNESS------------RYSHLMNKCRTSL 203
                             +S S +E E   S  +S              S +     ++ 
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESAN 220

Query: 204 DLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNII----CYSFPFILFLLLCC 263
            +F  IW+++G  WV        + +P+++ L    L +++     C +   ++ + +CC
Sbjct: 221 TMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCC 280

Query: 264 CVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTG------ 323
           C+P I +++ Y +   + ++GA  + I QL  ++++ +  D N  +  +   T       
Sbjct: 281 CLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKL-GDANKHTNDEAQGTTEGIMTE 340

Query: 324 ----------LPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQ 341
                     L ++D ECCICL+ Y D  E+R+LPC H FH  CVDKWL I ++CPLCK 
Sbjct: 341 CGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKY 397

[Close]

BLAST of CmaCh09G010250.1 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 73/268 (27.24%), Postives = 131/268 (48.88%), Query Frame = 1


Query: 95  LIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSIS-- 154
           ++ S + L  +  ERP  P+R+WI  Y L C+  +++++  +  R   R   D  S    
Sbjct: 89  VLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHE 148

Query: 155 ----DIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLH 214
               + ++EQ   + S+ YS  + +C +   +   IW+++G  WV++        AP L+
Sbjct: 149 DYNIEYDYEQDSDDNSTTYS-FVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLY 208

Query: 215 LLCSFLLV----WNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQL 274
            L    L     + + C     ++ + LCCC+P I +L+     +  TE G  + ++  L
Sbjct: 209 WLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL---YAVAGTE-GVSEAELGVL 268

Query: 275 PYWRYQAVHADINPKSRPDN------------SHTGLPKDDPECCICLAKYIDKEEVRQL 334
           P ++++A H++    + P              +   L  +D +CCICL+ Y D  E+  L
Sbjct: 269 PLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHAL 328

Query: 335 PCSHVFHLKCVDKWLAIASSCPLCKQQL 341
           PC+H FH  C+ KWL + ++CPLCK  +
Sbjct: 329 PCNHHFHSTCIVKWLKMRATCPLCKYNI 351

[Close]

BLAST of CmaCh09G010250.1 vs. Swiss-Prot
Match: R111A_XENLA (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis GN=rnf111-a PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 242 LIGYNINMGSTEKGALDDQISQLPY-WRYQAVHADINPKSRPDNSHTG--LPKDDPE--C 301
           LI     +G+  +GA    I +  Y  +Y+ V  D   + +  +   G   P++D E  C
Sbjct: 812 LIHLEERLGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKC 871

Query: 302 CICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCK 338
            ICL+   + E+VR+LPC H+FH  CVD+WL     CP+C+
Sbjct: 872 TICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 912

[Close]

BLAST of CmaCh09G010250.1 vs. TrEMBL
Match: A0A0A0K4H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 4.7e-171
Identity = 296/349 (84.81%), Postives = 314/349 (89.97%), Query Frame = 1


Query: 1   MIHSGFFLSGPSLNSDATTSFISIPVSGGDGATA-------LDAIPPSFWVKTAMKVSRA 60
           MIHSGFFLSGPS NSDATTSFISI VS  DGA A        D++PPSFWVK AMK+SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPF+SGSWM MELVALLFQLIIS  TLAISQ E+PVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNK 180
           MRLWIGGYDLGCVLSLL+LYGRHRY Y   +Q DGNS+SDIEHEQQR+NESSRYSHLMN+
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYL--MQRDGNSLSDIEHEQQRTNESSRYSHLMNR 180

Query: 181 CRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLC 240
           CRTSLDLFFAIWFVMGNLW  DSR ASF+RAPKLHLLCSFLLVWN ICYSFPFILFLLLC
Sbjct: 181 CRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLC 240

Query: 241 CCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDD 300
           CCVPLISSL GYNIN GSTEKGA DDQISQLP WRY+AV A+INP+S+ DNS+TGL K+D
Sbjct: 241 CCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKED 300

Query: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           PECCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAI SSCPLCKQQLQR
Sbjct: 301 PECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmaCh09G010250.1 vs. TrEMBL
Match: A0A0A0K7S5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.9e-127
Identity = 228/347 (65.71%), Postives = 274/347 (78.96%), Query Frame = 1


Query: 1   MIHSGFFLSGPSLNSDATTSFISIPVSGGDGATALD-------AIPPSFWVKTAMKVSRA 60
           MI+S +F+SG S N    TS         +    +D       A+P SFWV+ AM+VSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWP 120
           RWFIFLRRVFHYQNGSRS+LG +PF+S SWM +ELVA++FQL I+V  LAIS+ E+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 121 MRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNK 180
           MRLWI GYDLGC+LSLL+LYGR  Y + Y + G+   +SD E  Q+R++++SR  HLMNK
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGR--YWHLYLMHGERVGLSDTE--QRRTSQASRSLHLMNK 180

Query: 181 CRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLC 240
           CRTSL+LFFAIWFVMGN+W++DSRF+SF+RAPKLHLLC FLLVWN ICYSFPFILFLLLC
Sbjct: 181 CRTSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLC 240

Query: 241 CCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDD 300
           CCVPL+SSL+GYNI+M ST+K ALDDQISQLP WRY+         S   +S+ GLPK+D
Sbjct: 241 CCVPLVSSLLGYNISMASTDKAALDDQISQLPCWRYKV-------SSMQPDSNEGLPKED 300

Query: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQL 341
           PECCICL KY D+EEVRQLPCSH FHL+CVDKWL+I SSCPLCKQQL
Sbjct: 301 PECCICLVKYRDEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336

[Close]

BLAST of CmaCh09G010250.1 vs. TrEMBL
Match: A0A061F5I6_THECC (RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 214/335 (63.88%), Postives = 258/335 (77.01%), Query Frame = 1


Query: 14  NSDATTSFISIPVSGGDGATA------LDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQN 73
           NS    S+ S P  G D   A        A P S  ++ AM++SRARWF FLRRVFHYQN
Sbjct: 14  NSSTAVSYSSNPPGGEDRMAAGARNRSPRAPPSSLLIRMAMRISRARWFTFLRRVFHYQN 73

Query: 74  GSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVL 133
           GSRSDLG NPF+S +WM++E +AL+ Q+ I+  TLAIS+ ERPVWPMR+WI GYD+GC+L
Sbjct: 74  GSRSDLGSNPFNSSTWMMLEFLALVIQISITTFTLAISKKERPVWPMRIWIVGYDIGCLL 133

Query: 134 SLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFV 193
           SLL+LYGR  Y + Y  QGDG  +SD+E  QQR+NE SR SHLMNKCRTSL+LFFAIWFV
Sbjct: 134 SLLLLYGR--YHHLYITQGDGFGLSDVE--QQRANEESRSSHLMNKCRTSLELFFAIWFV 193

Query: 194 MGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLCCCVPLISSLIGYNI 253
           MGN+WV DSRF SF RAP LH+LC  LL WN + YSFPF+LFLLLCCCVPLISSL+GYN+
Sbjct: 194 MGNVWVFDSRFGSFHRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSLLGYNM 253

Query: 254 NMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDDPECCICLAKYIDKE 313
           NMGS ++GA DDQIS+LP WRY+ ++ ++       + +  L  +DPECCICLAKY DKE
Sbjct: 254 NMGSNDRGASDDQISRLPSWRYKEINTNLE-LDHDSDCNASLANEDPECCICLAKYKDKE 313

Query: 314 EVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           EVRQLPCSH+FHLKCVD+WL I S CPLCKQ+L+R
Sbjct: 314 EVRQLPCSHIFHLKCVDQWLRIISCCPLCKQELER 343

[Close]

BLAST of CmaCh09G010250.1 vs. TrEMBL
Match: D7UAM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01000 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.9e-120
Identity = 215/343 (62.68%), Postives = 265/343 (77.26%), Query Frame = 1


Query: 6   FFLSGPSLNSDATTSFISIPVSGGDGATA------LDAIPPSFWVKTAMKVSRARWFIFL 65
           FF      NS  + SF S+  +G D   A        A P SF ++TAM++SRARWF FL
Sbjct: 6   FFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNRSSRAPPSSFLIRTAMRISRARWFSFL 65

Query: 66  RRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIG 125
           RRVFHYQNGSRSDLG NPF+S +WM++E +AL+ Q+ +   TL++S+ ERPVWPMR+WI 
Sbjct: 66  RRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIV 125

Query: 126 GYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNKCRTSLD 185
           GYD GCVLSLL+LY R  Y+  Y  QGDG S+ DIE  QQR+NE SR SHLMNKCRTSL+
Sbjct: 126 GYDFGCVLSLLLLYWR--YQRPYSAQGDGFSLPDIE--QQRNNEESRSSHLMNKCRTSLE 185

Query: 186 LFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLCCCVPLI 245
           LFFAIWFVMGN+WV DSRF SF RAPKLH+LC  LL WN I YSFPF+LF+LLCCCVPL+
Sbjct: 186 LFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLV 245

Query: 246 SSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDDPECCIC 305
           S+L+GYN+NMGS +KGA DDQIS+LP WR++  +A+++  +  D S++ L  + PECCIC
Sbjct: 246 SNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGAD-SNSPLSSEYPECCIC 305

Query: 306 LAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           LAKY +KEEVRQLPCSH+FHLKCVD+WL I S CPLCKQ+++R
Sbjct: 306 LAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343

[Close]

BLAST of CmaCh09G010250.1 vs. TrEMBL
Match: A5B8G5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016708 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.9e-120
Identity = 215/343 (62.68%), Postives = 265/343 (77.26%), Query Frame = 1


Query: 6   FFLSGPSLNSDATTSFISIPVSGGDGATA------LDAIPPSFWVKTAMKVSRARWFIFL 65
           FF      NS  + SF S+  +G D   A        A P SF ++TAM++SRARWF FL
Sbjct: 6   FFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNRSSRAPPSSFLIRTAMRISRARWFSFL 65

Query: 66  RRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIG 125
           RRVFHYQNGSRSDLG NPF+S +WM++E +AL+ Q+ +   TL++S+ ERPVWPMR+WI 
Sbjct: 66  RRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIV 125

Query: 126 GYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNKCRTSLD 185
           GYD GCVLSLL+LY R  Y+  Y  QGDG S+ DIE  QQR+NE SR SHLMNKCRTSL+
Sbjct: 126 GYDFGCVLSLLLLYWR--YQRPYSAQGDGFSLPDIE--QQRNNEESRSSHLMNKCRTSLE 185

Query: 186 LFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLCCCVPLI 245
           LFFAIWFVMGN+WV DSRF SF RAPKLH+LC  LL WN I YSFPF+LF+LLCCCVPL+
Sbjct: 186 LFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLV 245

Query: 246 SSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDDPECCIC 305
           S+L+GYN+NMGS +KGA DDQIS+LP WR++  +A+++  +  D S++ L  + PECCIC
Sbjct: 246 SNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGAD-SNSPLSSEYPECCIC 305

Query: 306 LAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           LAKY +KEEVRQLPCSH+FHLKCVD+WL I S CPLCKQ+++R
Sbjct: 306 LAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343

[Close]

BLAST of CmaCh09G010250.1 vs. TAIR10
Match: AT5G55970.1 (AT5G55970.1 RING/U-box superfamily protein)

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-117
Identity = 201/311 (64.63%), Postives = 242/311 (77.81%), Query Frame = 1


Query: 32  ATALDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVAL 91
           A   +  P SF+++ AMKVSRARWFIFLRRVFHYQNGSRSDLG NPF+S +WM+ EL+AL
Sbjct: 40  ANGQERSPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIAL 99

Query: 92  LFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSI 151
           L QL +   TLAIS+ ERP+WP+RLWI GYD+GC+L+L++LYGR  YR     QG+G  +
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGR--YRQLDINQGNGFVL 159

Query: 152 SDIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLC 211
            D+E +QQR  E +R SHLMNKCRTSL+LFFAIWFV+GN+WV DSRF SF  APKLH+LC
Sbjct: 160 GDVE-QQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLC 219

Query: 212 SFLLVWNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQA 271
             LL WN ICYSFPF+LFL LCC VPLISSL+GYN+NMGS+++ A DDQIS LP W+++ 
Sbjct: 220 VSLLAWNAICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKR 279

Query: 272 VHADINPKSRPDNSHTGLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIAS 331
               I+  +   +S +    DDPECCICLAKY DKEEVR+LPCSH FH KCVD+WL I S
Sbjct: 280 ----IDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIIS 339

Query: 332 SCPLCKQQLQR 343
            CPLCKQ L R
Sbjct: 340 CCPLCKQDLPR 343

[Close]

BLAST of CmaCh09G010250.1 vs. TAIR10
Match: AT4G26580.1 (AT4G26580.1 RING/U-box superfamily protein)

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-112
Identity = 195/329 (59.27%), Postives = 244/329 (74.16%), Query Frame = 1


Query: 12  SLNSDATTSFISIPVSGGDGATALDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQNGSRS 71
           S+   +++SF S  +          +   SF+++ AM+VSRARWFIFLRRVFHYQN SRS
Sbjct: 16  SITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNASRS 75

Query: 72  DLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLV 131
           DLG NPF+S +WMV EL+ALL Q+ +   TLA+S+ ERPVWPMRLWI GY++GC+L+L++
Sbjct: 76  DLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLML 135

Query: 132 LYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNL 191
           LYGR  YR +     +  S  DIE +Q+   E++R SHLMNKCRTSL+LFFAIWFV+GN+
Sbjct: 136 LYGR--YRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNV 195

Query: 192 WVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLCCCVPLISSLIGYNINMGS 251
           WV DSRF SF  AP LH+LC  LL WN +CYSFPF+LFLLLCC VPL+SS +GYN+N+GS
Sbjct: 196 WVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGS 255

Query: 252 TEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDDPECCICLAKYIDKEEVRQ 311
           +EKGA DDQIS LP W+Y+ +          + S +    +DPECCICLAKY +KEEVR+
Sbjct: 256 SEKGASDDQISSLPSWKYKLI---------DETSDSSQANNDPECCICLAKYKEKEEVRK 315

Query: 312 LPCSHVFHLKCVDKWLAIASSCPLCKQQL 341
           LPCSH FHLKCVD+WL I S CPLCKQ L
Sbjct: 316 LPCSHRFHLKCVDQWLRIISCCPLCKQDL 333

[Close]

BLAST of CmaCh09G010250.1 vs. TAIR10
Match: AT4G32600.1 (AT4G32600.1 RING/U-box superfamily protein)

HSP 1 Score: 182.6 bits (462), Expect = 4.2e-46
Identity = 104/305 (34.10%), Postives = 162/305 (53.11%), Query Frame = 1


Query: 76  NPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGR 135
           +P +SG W+ +EL   + Q+I +++ L++S+ E P  P+  WI GY  GCV +L +LY R
Sbjct: 105 SPLNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWR 164

Query: 136 HRYRYRYRIQGDGN-------------------SISDIEHEQQRSNESSRYSHLMNKCRT 195
           + +  +   Q  G                    S +D       S+  SRY   ++  R 
Sbjct: 165 YYHSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARL 224

Query: 196 ---------SLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFI 255
                    +LD FFA+WFV+GN+W+     ++ E AP L+ LC   L ++ I Y+ PFI
Sbjct: 225 KVIVEYFKMALDCFFAVWFVVGNVWIFGGHSSAAE-APNLYRLCLVFLTFSCIGYAMPFI 284

Query: 256 LFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHT 315
           L   +CCC+P I S++GY  ++ +  +GA  + I+ LP  +++   +  N      ++  
Sbjct: 285 LCTTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSE 344

Query: 316 G------------LPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPL 341
           G            +  +D  CCICLAKY + EE+R+LPCSH FH +CVDKWL I +SCPL
Sbjct: 345 GGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPL 404

[Close]

BLAST of CmaCh09G010250.1 vs. TAIR10
Match: AT1G80400.1 (AT1G80400.1 RING/U-box superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-45
Identity = 107/320 (33.44%), Postives = 169/320 (52.81%), Query Frame = 1


Query: 67  NGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWPMRLWIGGYDLGCV 126
           NG R+    +P +SG W+ +ELV  + Q++ +++ + +++ E P  P+  W+ GY  GC+
Sbjct: 92  NGRRTR---SPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 151

Query: 127 LSLLVLYGRHRYRYRYRIQ--------GDGNSISD----IEHEQQRSNESS--------- 186
            +L +LY R R   R   Q          GNS S     +   Q    E+S         
Sbjct: 152 ATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRN 211

Query: 187 ---------RYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLV 246
                    R + L++  + ++D FFA+WFV+GN+W+     +S   +PKL+ LC   L 
Sbjct: 212 NQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLT 271

Query: 247 WNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADI 306
           ++ I Y+ PFIL   +CCC+P + S++G+  N   T +GA  + I+ LP +R+++     
Sbjct: 272 FSCIGYAMPFILCATICCCLPCLISVLGFRENFSQT-RGATAEAINALPVYRFKS----- 331

Query: 307 NPKSRPDNSHTG----------------LPKDDPECCICLAKYIDKEEVRQLPCSHVFHL 341
             KSR D   +                 +  +D  CCICL +Y D E+VR+LPCSHVFH+
Sbjct: 332 --KSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHV 391

[Close]

BLAST of CmaCh09G010250.1 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 80/261 (30.65%), Postives = 136/261 (52.11%), Query Frame = 1


Query: 97  ISVITLAISQIERPVWPMRLWIGGYDLGCVLSL--LVLYGRHRYRYRYRIQGDGNSISDI 156
           I V  L +S+ E+P  P+R+W+ GY + C L +  + +  R R R R+   G G+ +++ 
Sbjct: 123 IGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNS 182

Query: 157 EHEQQRS----NESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLL 216
             +Q  S     +    S+      ++  +F  IW+++G  WV          +P+L+ L
Sbjct: 183 SSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWL 242

Query: 217 CSFLLVWNII----CYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPY 276
           C   L +++     C +   ++ L +CCC+P I +++ Y +   + ++GA  + I Q+P 
Sbjct: 243 CIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASKNDIDQMPK 302

Query: 277 WRYQAVH--ADINPKSRPDNSHTG--------LPKDDPECCICLAKYIDKEEVRQLPCSH 336
           +R+        ++ K+R   +  G        L  +D ECCICL +Y D  E+R+LPC+H
Sbjct: 303 FRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNH 362

Query: 337 VFHLKCVDKWLAIASSCPLCK 338
            FH  C+DKWL I S CPLCK
Sbjct: 363 HFHCTCIDKWLHINSRCPLCK 379

[Close]

BLAST of CmaCh09G010250.1 vs. NCBI nr
Match: gi|659126131|ref|XP_008463025.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo])

HSP 1 Score: 615.9 bits (1587), Expect = 4.2e-173
Identity = 299/349 (85.67%), Postives = 317/349 (90.83%), Query Frame = 1


Query: 1   MIHSGFFLSGPSLNSDATTSFISIPVSGGDGATA-------LDAIPPSFWVKTAMKVSRA 60
           MIHSGFFLSGPS NSDATTSFISI VSG DGA A        D++PPSFWVK AMK+SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPF+SG WM MELVALLFQLIISV TLAISQ E+PVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNK 180
           MRLWIGGYDLGCVLSLL+LYGRHRY Y   +QG+ N +SDIEHEQQRSNESSRYSHLMN+
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYL--MQGNDNRLSDIEHEQQRSNESSRYSHLMNR 180

Query: 181 CRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLC 240
           CRTSLDLFFAIWFVMGNLWV DSR ASF+RAPKLHLLCSFLLVWN ICYSFPFILFLLLC
Sbjct: 181 CRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLC 240

Query: 241 CCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDD 300
           CCVPLISSL GYNINMGS+EKGA DDQISQLP WRY+AV A+INP+S+PDNS+TGL K+D
Sbjct: 241 CCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKED 300

Query: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAI SSCPLCKQQLQR
Sbjct: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmaCh09G010250.1 vs. NCBI nr
Match: gi|778726317|ref|XP_011659087.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativus])

HSP 1 Score: 608.6 bits (1568), Expect = 6.7e-171
Identity = 296/349 (84.81%), Postives = 314/349 (89.97%), Query Frame = 1


Query: 1   MIHSGFFLSGPSLNSDATTSFISIPVSGGDGATA-------LDAIPPSFWVKTAMKVSRA 60
           MIHSGFFLSGPS NSDATTSFISI VS  DGA A        D++PPSFWVK AMK+SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPF+SGSWM MELVALLFQLIIS  TLAISQ E+PVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNK 180
           MRLWIGGYDLGCVLSLL+LYGRHRY Y   +Q DGNS+SDIEHEQQR+NESSRYSHLMN+
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYL--MQRDGNSLSDIEHEQQRTNESSRYSHLMNR 180

Query: 181 CRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLC 240
           CRTSLDLFFAIWFVMGNLW  DSR ASF+RAPKLHLLCSFLLVWN ICYSFPFILFLLLC
Sbjct: 181 CRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLC 240

Query: 241 CCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDD 300
           CCVPLISSL GYNIN GSTEKGA DDQISQLP WRY+AV A+INP+S+ DNS+TGL K+D
Sbjct: 241 CCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKED 300

Query: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           PECCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAI SSCPLCKQQLQR
Sbjct: 301 PECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmaCh09G010250.1 vs. NCBI nr
Match: gi|659126133|ref|XP_008463026.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo])

HSP 1 Score: 570.1 bits (1468), Expect = 2.6e-159
Identity = 270/309 (87.38%), Postives = 288/309 (93.20%), Query Frame = 1


Query: 34  ALDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLF 93
           A D++PPSFWVK AMK+SRARWFIFLRRVFHYQNGSRSDLGPNPF+SG WM MELVALLF
Sbjct: 9   ASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLF 68

Query: 94  QLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISD 153
           QLIISV TLAISQ E+PVWPMRLWIGGYDLGCVLSLL+LYGRHRY Y   +QG+ N +SD
Sbjct: 69  QLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYL--MQGNDNRLSD 128

Query: 154 IEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSF 213
           IEHEQQRSNESSRYSHLMN+CRTSLDLFFAIWFVMGNLWV DSR ASF+RAPKLHLLCSF
Sbjct: 129 IEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSF 188

Query: 214 LLVWNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVH 273
           LLVWN ICYSFPFILFLLLCCCVPLISSL GYNINMGS+EKGA DDQISQLP WRY+AV 
Sbjct: 189 LLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVE 248

Query: 274 ADINPKSRPDNSHTGLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSC 333
           A+INP+S+PDNS+TGL K+DPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAI SSC
Sbjct: 249 ANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSC 308

Query: 334 PLCKQQLQR 343
           PLCKQQLQR
Sbjct: 309 PLCKQQLQR 315

[Close]

BLAST of CmaCh09G010250.1 vs. NCBI nr
Match: gi|449463372|ref|XP_004149408.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Cucumis sativus])

HSP 1 Score: 565.8 bits (1457), Expect = 5.0e-158
Identity = 268/309 (86.73%), Postives = 286/309 (92.56%), Query Frame = 1


Query: 34  ALDAIPPSFWVKTAMKVSRARWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLF 93
           A D++PPSFWVK AMK+SRARWFIFLRRVFHYQNGSRSDLGPNPF+SGSWM MELVALLF
Sbjct: 9   ASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLF 68

Query: 94  QLIISVITLAISQIERPVWPMRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISD 153
           QLIIS  TLAISQ E+PVWPMRLWIGGYDLGCVLSLL+LYGRHRY Y   +Q DGNS+SD
Sbjct: 69  QLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYL--MQRDGNSLSD 128

Query: 154 IEHEQQRSNESSRYSHLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSF 213
           IEHEQQR+NESSRYSHLMN+CRTSLDLFFAIWFVMGNLW  DSR ASF+RAPKLHLLCSF
Sbjct: 129 IEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSF 188

Query: 214 LLVWNIICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVH 273
           LLVWN ICYSFPFILFLLLCCCVPLISSL GYNIN GSTEKGA DDQISQLP WRY+AV 
Sbjct: 189 LLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVE 248

Query: 274 ADINPKSRPDNSHTGLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSC 333
           A+INP+S+ DNS+TGL K+DPECCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAI SSC
Sbjct: 249 ANINPRSQLDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSC 308

Query: 334 PLCKQQLQR 343
           PLCKQQLQR
Sbjct: 309 PLCKQQLQR 315

[Close]

BLAST of CmaCh09G010250.1 vs. NCBI nr
Match: gi|659126137|ref|XP_008463028.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo])

HSP 1 Score: 466.8 bits (1200), Expect = 3.1e-128
Identity = 231/349 (66.19%), Postives = 275/349 (78.80%), Query Frame = 1


Query: 1   MIHSGFFLSGPSLNSDATTSFI---SIPVSGGDGATALD----AIPPSFWVKTAMKVSRA 60
           M++S +F+SG S N  A TS     S+    G G    D    A+  SFWV+ AM+VSRA
Sbjct: 1   MVNSVYFVSGSSCNCGAGTSLFTPNSLVEEDGAGVDVRDDNSVALSASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQIERPVWP 120
           RWFIFLRRVFHYQNGSRS+LG +PF+S SWM MELVA++ QL+I+V  LAIS+ E+P+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELVAMVVQLVITVFVLAISEAEKPIWP 120

Query: 121 MRLWIGGYDLGCVLSLLVLYGRHRYRYRYRIQGDGNSISDIEHEQQRSNESSRYSHLMNK 180
           MRLWI GYDLGC+LSLL+LYGR  Y + Y + G+   +SD E  QQRS+++SR   LMNK
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGR--YWHLYLMHGERVGLSDTE--QQRSSQASRCLRLMNK 180

Query: 181 CRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNIICYSFPFILFLLLC 240
           CRTSL+LFFAIWFVMGN+W++DSRF+SF+RAPKLHLLC FLLVWN  CYSFPFILFLLLC
Sbjct: 181 CRTSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNATCYSFPFILFLLLC 240

Query: 241 CCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYQAVHADINPKSRPDNSHTGLPKDD 300
           CCVPL+S L+GYNI+M ST+KGALDDQISQLP WRY+         S   +S+  LPK+D
Sbjct: 241 CCVPLVSRLLGYNISMASTDKGALDDQISQLPCWRYKV-------SSMQPDSNKRLPKED 300

Query: 301 PECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCKQQLQR 343
           PECCICL KY D+EEVRQLPCSH FHLKCVDKWL+I SSCPLCKQQLQ+
Sbjct: 301 PECCICLVKYRDEEEVRQLPCSHFFHLKCVDKWLSITSSCPLCKQQLQK 338

The following BLAST results are available for this feature:

BLAST of CmaCh09G010250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING4_ARATH	1.3e-28	30.65	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ...	[more]
RING2_ARATH	2.4e-27	27.81	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ...	[more]
RING1_ARATH	1.0e-25	26.82	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ...	[more]
RIE1_ARATH	1.1e-24	27.24	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1	[more]
R111A_XENLA	2.7e-10	34.65	E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis GN=rnf111-a P...	[more]

BLAST of CmaCh09G010250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4H0_CUCSA	4.7e-171	84.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1	[more]
A0A0A0K7S5_CUCSA	1.9e-127	65.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1	[more]
A0A061F5I6_THECC	2.0e-121	63.88	RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 ...	[more]
D7UAM0_VITVI	2.9e-120	62.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01000 PE=4 SV=...	[more]
A5B8G5_VITVI	2.9e-120	62.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016708 PE=4 SV=1	[more]

BLAST of CmaCh09G010250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55970.1	2.0e-117	64.63	RING/U-box superfamily protein	[more]
AT4G26580.1	1.2e-112	59.27	RING/U-box superfamily protein	[more]
AT4G32600.1	4.2e-46	34.10	RING/U-box superfamily protein	[more]
AT1G80400.1	3.5e-45	33.44	RING/U-box superfamily protein	[more]
AT4G11680.1	7.2e-30	30.65	Zinc finger, C3HC4 type (RING finger) family protein	[more]

BLAST of CmaCh09G010250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126131\|ref\|XP_008463025.1\|	4.2e-173	85.67	PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo]	[more]
gi\|778726317\|ref\|XP_011659087.1\|	6.7e-171	84.81	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativu...	[more]
gi\|659126133\|ref\|XP_008463026.1\|	2.6e-159	87.38	PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo]	[more]
gi\|449463372\|ref\|XP_004149408.1\|	5.0e-158	86.73	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Cucumis sativu...	[more]
gi\|659126137\|ref\|XP_008463028.1\|	3.1e-128	66.19	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G010250	CmaCh09G010250	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G010250.1	CmaCh09G010250.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G010250.1.exon.3	CmaCh09G010250.1.exon.3	exon
CmaCh09G010250.1.exon.2	CmaCh09G010250.1.exon.2	exon
CmaCh09G010250.1.exon.1	CmaCh09G010250.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G010250.1.CDS.1	CmaCh09G010250.1.CDS.1	CDS
CmaCh09G010250.1.CDS.2	CmaCh09G010250.1.CDS.2	CDS
CmaCh09G010250.1.CDS.3	CmaCh09G010250.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G010250.1.three_prime_UTR.1	CmaCh09G010250.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 294..337 score: 1.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 296..336 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 296..337 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 292..340 score: 1.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 39..342 score: 1.3E
None	No IPR available	PANTHER	PTHR14155:SF83	RING/U-BOX DOMAIN-CONTAINING PROTEIN	coord: 39..342 score: 1.3E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 291..340 score: 1.5