CmaCh09G006990.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCAATAATGCGAACTTTGAAAAAGCGGAATCACAGATGCAGATAGGGAGCACAGTCGATCCATCTTTGAGTAGAAAGAAAGCAACATAAAAAGGTAACCAAATCTCCCATTTTCTTCATCTTCCTCATCTCTCAAGCAAGAATCTATACCCATTATGTTTACAGACCAGCGAAGGTTTACATTTTCATCTCCTCTGCATTGCACCACACTCACTATATCACTGTACTGTTGAATTTGAATGACGAACAAATCGTATTTATTCTTTCATGGCTGCCTCTGCTTTCCTGCCAATCCTATTCGCTTTTCTATCCGGGTTGCTCACCAAGTGTATGTATAAATGCCGCTTCGAGCTGAAAACATTTGAACAGCTCATTGAGCTATGGAGCGATTGTGGGTTGTCATTTTTTACATCTCTATTGCTTTTCTACACACTACCCTGGCTATTCCAAGTGGTAATTGATTATGTTTTACATTTTCATCTCCTCTGCATTGCAACACACTCACTACTATATCACTGTGCTGTTGAATTTGATTGATGAACGAATCGTATTTATTCTTTCATGGCTACCTCTGCTTTCTTCCCAATTCTATTCGCTTTTCTACCTGGTTTGCCCACCAAGTGTTTGTATAAATGCCGCTTCGAGCTCAAAACATTTGAACAGCTCATTGAGCTATGGAGCGATTGTGGGTTGTCTTTTTTTTTACTTCTCTATTGCTTTTTTATCCACTTCCCTGGCTATTCCAAGTGGTAATTGATTATGTTTTTACATTTTCAAGCTCTGTTTTTTTTTACTGTGGTGTCTGTTTTTATAAGATTTCGTGAGACTTCTTTCTTGCAGATGCTGGTAGAAGCTCAACCAGTGAGTTCTTGAAGAAGGTGAAACTACAAATTCAAGAGGGGATTATTTCAAAACCCCAACTGAAATTCTTGACTGTTAACTCTCCATTTTCATTGCCTCCTTTTGATTCACTTGCACCAATCCCATTGCCTGTAAAGTCTCCTCCTTTCTGTGAAGATGAACCGCCCCAAACTCCTCAGTCACCACCACCACCAGCACCGCCGCCGTCACCACCTGGGATGATGTATTCCCACGCCCCACCACCGCCACCACCTGGGATGATGTATTCCCGCGCCCCACCACCGCCAGGTTTTCAGCCCAATGTACCTACCAGAAGCCGAAACCCTCCACCAAGCCCACCTAGCATCATCCCAATGACCCCTTCCGTCCCCTTAGCCCCATATCCTCCTAAGAACATTTCCAGCCCCACCCCACCAACTGGTCTTCCAAGCCCACCTCGCCACTATGGTCCTACCCCTCCTAAACATGCTTCTGGGCCACCCAGTCATGGGGGGCTTAGCCCACCAATGGGGTTCTCTCCGCCACCTGGTTCACCTCGTGCAGAACATGGGGGGAAGCCACGGTCGTCTGGTGCAGCATGGTGTGTGGCTAAGCCGTCTGTGGCTGATGCAATAATTCAAGAAGCCATGGATTATGCTTGTGGGTCAGGAGCCGACTGCATGGCCATTCAGCCTAATGGACATTGCTATGAACCTGACACTATTGTGGCACACGCCTCGTATGCTTTCAATAGCTACTGGCAGAAAACCAAGGTCAGTGGCGGTACCTGCGATTTTGGAGGAACTGCCATGCTTGTAACAGTGGATCCAAGTGAGTTCATCACTCGCCATCTTTTTCCAACATGTTCCTTTCAAATTCAACACAACCACTAGTTTAAACTAAACATTTAAAATTTTAAAAAAAATCCTCAATTACAATTTGAAAAAAAATCATAATATGAATATTTTGAGAAACAAACATAAATTTCAAAGAATAGAATAAAAACGGGATCTTAATTATAAAAAATCTACCAGCTCCCTTCGATCCAATAACTTAGATGGATCGATTGCACCCATAAAAAGGAATCATGCTACTAAATCAAAGACTTTTTTTTGTTGGTGATTTTTGTTAAAGTTTTTTTTTGGCTTGGTTGTGGCAGGTTCTGAAGGGTGTAAGTTCGTCCTCGGTTGAGATTAGAGATGGAGACACTCCTTGGTTCATCATTTTTGATATATTGAATCTATGAAAAAATTTAGCTCTCTCTACATACGGTTTTCATTCTGAGCATAAGTTTTTATGGTTTTGCTTTGGACTTCTACAGAAGGTCTTATATCAATAATATTCTTTGATTATAAATTCACGATCATTCCTTAAATTAGAGGTGG CTCCAATAATGCGAACTTTGAAAAAGCGGAATCACAGATGCAGATAGGGAGCACAGTCGATCCATCTTTGAGTAGAAAGAAAGCAACATAAAAAGGTAACCAAATCTCCCATTTTCTTCATCTTCCTCATCTCTCAAGCAAGAATCTATACCCATTATGTTTACAGACCAGCGAAGGTTTACATTTTCATCTCCTCTGCATTGCACCACACTCACTATATCACTGTACTGTTGAATTTGAATGACGAACAAATCGTATTTATTCTTTCATGGCTGCCTCTGCTTTCCTGCCAATCCTATTCGCTTTTCTATCCGGGTTGCTCACCAAGTGTATGTATAAATGCCGCTTCGAGCTGAAAACATTTGAACAGCTCATTGAGCTATGGAGCGATTGTGGGTTGTCATTTTTTACATCTCTATTGCTTTTCTACACACTACCCTGGCTATTCCAAGTGATGCTGGTAGAAGCTCAACCAGTGAGTTCTTGAAGAAGGTGAAACTACAAATTCAAGAGGGGATTATTTCAAAACCCCAACTGAAATTCTTGACTGTTAACTCTCCATTTTCATTGCCTCCTTTTGATTCACTTGCACCAATCCCATTGCCTGTAAAGTCTCCTCCTTTCTGTGAAGATGAACCGCCCCAAACTCCTCAGTCACCACCACCACCAGCACCGCCGCCGTCACCACCTGGGATGATGTATTCCCACGCCCCACCACCGCCACCACCTGGGATGATGTATTCCCGCGCCCCACCACCGCCAGGTTTTCAGCCCAATGTACCTACCAGAAGCCGAAACCCTCCACCAAGCCCACCTAGCATCATCCCAATGACCCCTTCCGTCCCCTTAGCCCCATATCCTCCTAAGAACATTTCCAGCCCCACCCCACCAACTGGTCTTCCAAGCCCACCTCGCCACTATGGTCCTACCCCTCCTAAACATGCTTCTGGGCCACCCAGTCATGGGGGGCTTAGCCCACCAATGGGGTTCTCTCCGCCACCTGGTTCACCTCGTGCAGAACATGGGGGGAAGCCACGGTCGTCTGGTGCAGCATGGTGTGTGGCTAAGCCGTCTGTGGCTGATGCAATAATTCAAGAAGCCATGGATTATGCTTGTGGGTCAGGAGCCGACTGCATGGCCATTCAGCCTAATGGACATTGCTATGAACCTGACACTATTGTGGCACACGCCTCGTATGCTTTCAATAGCTACTGGCAGAAAACCAAGGTCAGTGGCGGTACCTGCGATTTTGGAGGAACTGCCATGCTTGTAACAGTGGATCCAAGTTCTGAAGGGTGTAAGTTCGTCCTCGGTTGAGATTAGAGATGGAGACACTCCTTGGTTCATCATTTTTGATATATTGAATCTATGAAAAAATTTAGCTCTCTCTACATACGGTTTTCATTCTGAGCATAAGTTTTTATGGTTTTGCTTTGGACTTCTACAGAAGGTCTTATATCAATAATATTCTTTGATTATAAATTCACGATCATTCCTTAAATTAGAGGTGG ATGGAGCGATTGTGGGTTGTCATTTTTTACATCTCTATTGCTTTTCTACACACTACCCTGGCTATTCCAAGTGATGCTGGTAGAAGCTCAACCAGTGAGTTCTTGAAGAAGGTGAAACTACAAATTCAAGAGGGGATTATTTCAAAACCCCAACTGAAATTCTTGACTGTTAACTCTCCATTTTCATTGCCTCCTTTTGATTCACTTGCACCAATCCCATTGCCTGTAAAGTCTCCTCCTTTCTGTGAAGATGAACCGCCCCAAACTCCTCAGTCACCACCACCACCAGCACCGCCGCCGTCACCACCTGGGATGATGTATTCCCACGCCCCACCACCGCCACCACCTGGGATGATGTATTCCCGCGCCCCACCACCGCCAGGTTTTCAGCCCAATGTACCTACCAGAAGCCGAAACCCTCCACCAAGCCCACCTAGCATCATCCCAATGACCCCTTCCGTCCCCTTAGCCCCATATCCTCCTAAGAACATTTCCAGCCCCACCCCACCAACTGGTCTTCCAAGCCCACCTCGCCACTATGGTCCTACCCCTCCTAAACATGCTTCTGGGCCACCCAGTCATGGGGGGCTTAGCCCACCAATGGGGTTCTCTCCGCCACCTGGTTCACCTCGTGCAGAACATGGGGGGAAGCCACGGTCGTCTGGTGCAGCATGGTGTGTGGCTAAGCCGTCTGTGGCTGATGCAATAATTCAAGAAGCCATGGATTATGCTTGTGGGTCAGGAGCCGACTGCATGGCCATTCAGCCTAATGGACATTGCTATGAACCTGACACTATTGTGGCACACGCCTCGTATGCTTTCAATAGCTACTGGCAGAAAACCAAGGTCAGTGGCGGTACCTGCGATTTTGGAGGAACTGCCATGCTTGTAACAGTGGATCCAAGTTCTGAAGGGTGTAAGTTCGTCCTCGGTTGA MERLWVVIFYISIAFLHTTLAIPSDAGRSSTSEFLKKVKLQIQEGIISKPQLKFLTVNSPFSLPPFDSLAPIPLPVKSPPFCEDEPPQTPQSPPPPAPPPSPPGMMYSHAPPPPPPGMMYSRAPPPPGFQPNVPTRSRNPPPSPPSIIPMTPSVPLAPYPPKNISSPTPPTGLPSPPRHYGPTPPKHASGPPSHGGLSPPMGFSPPPGSPRAEHGGKPRSSGAAWCVAKPSVADAIIQEAMDYACGSGADCMAIQPNGHCYEPDTIVAHASYAFNSYWQKTKVSGGTCDFGGTAMLVTVDPSSEGCKFVLG
BLAST of CmaCh09G006990.1 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-21 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.5e-20 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. Swiss-Prot
Match: PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.0e-18 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TrEMBL
Match: A0A0A0KZY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G620610 PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 1.9e-110 Identity = 233/339 (68.73%), Postives = 256/339 (75.52%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TrEMBL
Match: A0A061DME6_THECC (Carbohydrate-binding X8 domain superfamily protein, putative OS=Theobroma cacao GN=TCM_002061 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.1e-49 Identity = 143/284 (50.35%), Postives = 167/284 (58.80%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TrEMBL
Match: M5XHN7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024492mg PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 2.7e-48 Identity = 128/256 (50.00%), Postives = 159/256 (62.11%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TrEMBL
Match: A0A0K9QW55_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_139710 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.9e-47 Identity = 143/287 (49.83%), Postives = 183/287 (63.76%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TrEMBL
Match: A0A068V0Y2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038547001 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 9.5e-46 Identity = 143/292 (48.97%), Postives = 164/292 (56.16%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TAIR10
Match: AT1G79480.1 (AT1G79480.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36 Identity = 121/255 (47.45%), Postives = 141/255 (55.29%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TAIR10
Match: AT5G67460.1 (AT5G67460.1 O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 129.8 bits (325), Expect = 2.9e-30 Identity = 80/162 (49.38%), Postives = 100/162 (61.73%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 4.1e-24 Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TAIR10
Match: AT5G08000.1 (AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 3) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-22 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. TAIR10
Match: AT1G18650.1 (AT1G18650.1 plasmodesmata callose-binding protein 3) HSP 1 Score: 99.4 bits (246), Expect = 4.2e-21 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. NCBI nr
Match: gi|449456665|ref|XP_004146069.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 407.1 bits (1045), Expect = 2.7e-110 Identity = 233/339 (68.73%), Postives = 256/339 (75.52%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. NCBI nr
Match: gi|659129330|ref|XP_008464632.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]) HSP 1 Score: 396.0 bits (1016), Expect = 6.2e-107 Identity = 229/348 (65.80%), Postives = 255/348 (73.28%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. NCBI nr
Match: gi|1009127470|ref|XP_015880713.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Ziziphus jujuba]) HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52 Identity = 161/327 (49.24%), Postives = 187/327 (57.19%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. NCBI nr
Match: gi|720015086|ref|XP_010260718.1| (PREDICTED: extensin [Nelumbo nucifera]) HSP 1 Score: 213.4 bits (542), Expect = 5.7e-52 Identity = 150/299 (50.17%), Postives = 185/299 (61.87%), Query Frame = 1
BLAST of CmaCh09G006990.1 vs. NCBI nr
Match: gi|590711289|ref|XP_007049064.1| (Carbohydrate-binding X8 domain superfamily protein, putative [Theobroma cacao]) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 143/284 (50.35%), Postives = 167/284 (58.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
|