CmaCh09G006840.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGGGGTTCCTTTTTGCGTTACTCCGCAATCTACCCGCCGCCCACAGGCGGAATTCTTATTGTCGTACCAGCGCCGCTTGATCCGACGGCGGCTTCGGAACGCAGCACGTTTTCTGCAAATTCATCGCACAGAATAAGAACAATTCCGACTCTGTTTTAAGAAATTTATTGTTTCCTAAACCTAATTTGATAATTTCGATTTTTCCTGTCCTTTTACCGCCAGCAAATCGCTTCCAGAAAAAGGAATCAGAAGCAGAAATTATTGAGATTCAGTGATTATTCGAAAACATGGCGGAATTCGAACAGATCGAGAAAACGCACCTGAAAGGAACGAGAGGAATAACAACAAAAAAGGAGAGAGCGCCCGCTTTCGCCGGTAATCTTGCTCTGTTATGCTGCTATCAGGTTGTAATACCGGAGGAAAGGAAGAATACATGAATATATAAGAATCACACTCGGAATGAAAGCGATGACTAAAAAAGTTGGAAGAAAATGAAAGCTATCATCGATAAGGTACATTTTTATTTTGAGTTACTAAATCATGCACAATTCGAACAAAATATATAAGAATTTTGAGTAATTATATATTTTTTGGGATGGATGTGAATTCGGACAAAACATATTGAAAAGACTTATAACGATTATATGTTGAGTGTCATCGTAATAATTTTCCTAGAATGCATGTGAGTGATGATTGAGGATAAAGACTAATGGAAGAACATAGAAGGCTTCTATGTTGGTTAGCTCCTAGTATAATTTTTTTGGAATGTATGTGAGTGAAGACAACCCATACTGAAATGATTTAGAGCAACTTTATGTTAAGTGAATTAGTAATTTTCTTAAAAGGTAGGTGTGTGAAAACAAAACAGGCCGAGGTGATTTAAATCTTGAGCATTATATTTAGTTACCAATTCTAACGAAAAATGAAGATTTTCATACTAACAATGAGACATGAAATAAGAAAGTATCCAAATGGAATAGGTAAAAATAACAACAAAAACCTGTCGGGAATAGGACAAAAAATCCGAATCAAAAGCGTAGCTTTTGGGACAAGATGACAGGTGGGCATCCAAACTACATGAATCTCCTCTCTTATCCAATCTCACTCAGAGCTTCCAAAGAGCAGAAGAAGAAATCTCTACAATGGCTGTAAATGCTGTAAATGCTGTAAATCCCACTCCATTACGCCTCCCATCAGCCATTCCCACTGGGAAATGGATTTCCAATGCCAGAGTTTGCCTCCCCAGAAAACCCCCAACTCAATCTACTTCCTCTTTCAACAAGAACTTCAGATCTCGTTCCAATTTCTCTCTCAAACCTTCTTCTTCTTCCCTTGCTTCAGGTAATGGAATGTCGATCTTTTGTTTTCTGCTTCTTTTGATGTTAATTGTGGGAAAAAAAATGTGGAATGATTCTTGAGTTTCTGTATAAGAGTTTGGGTTTTGATTCATTTATGAAAAGAAATTTCGGAAATTGTTCAAAATCAATGGTTTAATGATGATTTCGGGTATGTTTGAGAGTGATTATGAAATGGTTAAAATGTTTGTTCTTTAATCAATGGGCTGCAACAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACTAATGTGAAATTTTCGACGTCCTTCACTCTTCCGGGCTGCTCGACTTCGCTGTCGTTGCTCGGAACAGGTTAGTTAATTATAGTTCTACATGGTTATAGTAAGGGGGGAGAAGAAGAATGCAGTGATCAACTGATTTTTATGAAAAATTACTGTTAATCGTCTACTGCTCATGGTTTTCTTGCAATGTATGTAAGAGAGCCCTTGAAAACAAAAGCTCGCTGCTATTTGTTGAGTATGAAAGAATTTTCGACATCTTTTTAGGAGTGAAGGAAACGAAAAACGAACGTCGTTCATGGCACAAGTCGTTTGTTGTAAAATGAAGTTGACGGTTTATTCTACTTTGAGACATAAACTGCATACATGTTTATTATTCTAAAGCTAATGTAACAACCCAAGTCCACCGCTAGTAGATATTATCCGTTTTGCCCCGTTATGTATCACCGTCAGCCTCACGGTTTTAAAATGTGTCTATTAAGGAAAGGTTTCCACATCCTTATAAGGAATGCTTTGTTCCTCTCTCCAACCGATGTGAGATTTCACAATCCACCCCCTTGAGGGTCCGGTGTCCTTGTTGGCACACCGTATGGTGTCTGGCTCTGTTGTTTGTTTTGGCCCATTATGCATCACCGTCAGTCTCACGGTTTTAAAACGCTCTGTTAGGGAGAGGTTTCCACACCCTTATTAAAAATGATTCGTTCCCCTCTCCGAACAATATGAGATCTCATAGGAATCTCACAGCTACCTATGAATTTTATACATCCAAAATGTGGATACTTTTAACTGTAATTATATTCTTCACTCTGATCTTCATCAGCTGCAAATATTTCAGGTTACAGAGAGAAGGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGATTATACATCAATTCATCCATCTCAAACGAATTAAATGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATCTTTCAGTGTAATAACCATTACCTATAAATCATACATAACTATATGATTATAGAAGTTGTGAATTATTTATGTTACTACAAGTTTATTGCCTTTCAATGGCAGCTCCTTTAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGATGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTATGTTTAAAATTTAACTGTCTTACATTTTCTTTTCTTTTCTTTTCTTTTCTTTTCCCTTCCTTTCATTAATGGTGAATTGCAGGTTAGCACCTCAGTTGACGGCCCACCGGCAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTTGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGTAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGAATATGGTTCCACCAAACAGATTACAAATGCGAGATCACAATAAGTGTATAATACATTTTAGAGATCACAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACTACCTCTGCCATTGTTGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAGTGCAATGCTAAATACGACATTAACCTCGTCGACTGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCTCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATCACACCATGAAAATCAGACAAGATATAGCTTATTGTTCAGCTGTCTGTTCTTTTTTATGAATAATATGTCCAATTTTTAGCATTTGAGTACTCAATCTATTGCCTC CAGGGGGTTCCTTTTTGCGTTACTCCGCAATCTACCCGCCGCCCACAGGCGGAATTCTTATTGTCGTACCAGCGCCGCTTGATCCGACGGCGGCTTCGGAACGCAGCACGTTTTCTGCAAATTCATCGCACAGAATAAGAACAATTCCGACTCTGTTTTAAGAAATTTATTGTTTCCTAAACCTAATTTGATAATTTCGATTTTTCCTGTCCTTTTACCGCCAGCAAATCGCTTCCAGAAAAAGGAATCAGAAGCAGAAATTATTGAGATTCAGTGATTATTCGAAAACATGGCGGAATTCGAACAGATCGAGAAAACGCACCTGAAAGGAACGAGAGGAATAACAACAAAAAAGGAGAGAGCGCCCGCTTTCGCCGGTAATCTTGCTCTGTTATGCTGCTATCAGGTTGTAATACCGGAGGAAAGGAAGAATACATGAATATATAAGAATCACACTCGGAATGAAAGCGATGACTAAAAAAGTTGGAAGAAAATGAAAGCTATCATCGATAAGGTACATTTTTATTTTGAGTTACTAAATCATGCACAATTCGAACAAAATATATAAGAATTTTGAGTAATTATATATTTTTTGGGATGGATGTGAATTCGGACAAAACATATTGAAAAGACTTATAACGATTATATGTTGAGTGTCATCGTAATAATTTTCCTAGAATGCATGTGAGTGATGATTGAGGATAAAGACTAATGGAAGAACATAGAAGGCTTCTATGTTGGTTAGCTCCTAGTATAATTTTTTTGGAATGTATGTGAGTGAAGACAACCCATACTGAAATGATTTAGAGCAACTTTATGTTAAGTGAATTAGTAATTTTCTTAAAAGGTAGGTGTGTGAAAACAAAACAGGCCGAGGTGATTTAAATCTTGAGCATTATATTTAGTTACCAATTCTAACGAAAAATGAAGATTTTCATACTAACAATGAGACATGAAATAAGAAAGTATCCAAATGGAATAGGTAAAAATAACAACAAAAACCTGTCGGGAATAGGACAAAAAATCCGAATCAAAAGCGTAGCTTTTGGGACAAGATGACAGGTGGGCATCCAAACTACATGAATCTCCTCTCTTATCCAATCTCACTCAGAGCTTCCAAAGAGCAGAAGAAGAAATCTCTACAATGGCTGTAAATGCTGTAAATGCTGTAAATCCCACTCCATTACGCCTCCCATCAGCCATTCCCACTGGGAAATGGATTTCCAATGCCAGAGTTTGCCTCCCCAGAAAACCCCCAACTCAATCTACTTCCTCTTTCAACAAGAACTTCAGATCTCGTTCCAATTTCTCTCTCAAACCTTCTTCTTCTTCCCTTGCTTCAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACTAATGTGAAATTTTCGACGTCCTTCACTCTTCCGGGCTGCTCGACTTCGCTGTCGTTGCTCGGAACAGGTTACAGAGAGAAGGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGATTATACATCAATTCATCCATCTCAAACGAATTAAATGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATCTTTCAGTCTCCTTTAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGATGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCACCTCAGTTGACGGCCCACCGGCAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTTGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGTAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGAATATGGTTCCACCAAACAGATTACAAATGCGAGATCACAATAAGTGTATAATACATTTTAGAGATCACAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACTACCTCTGCCATTGTTGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAGTGCAATGCTAAATACGACATTAACCTCGTCGACTGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCTCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATCACACCATGAAAATCAGACAAGATATAGCTTATTGTTCAGCTGTCTGTTCTTTTTTATGAATAATATGTCCAATTTTTAGCATTTGAGTACTCAATCTATTGCCTC ATGGCTGTAAATGCTGTAAATGCTGTAAATCCCACTCCATTACGCCTCCCATCAGCCATTCCCACTGGGAAATGGATTTCCAATGCCAGAGTTTGCCTCCCCAGAAAACCCCCAACTCAATCTACTTCCTCTTTCAACAAGAACTTCAGATCTCGTTCCAATTTCTCTCTCAAACCTTCTTCTTCTTCCCTTGCTTCAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACTAATGTGAAATTTTCGACGTCCTTCACTCTTCCGGGCTGCTCGACTTCGCTGTCGTTGCTCGGAACAGGTTACAGAGAGAAGGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGATTATACATCAATTCATCCATCTCAAACGAATTAAATGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATCTTTCAGTCTCCTTTAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGATGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCACCTCAGTTGACGGCCCACCGGCAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTTGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGTAGTTTTGAAATAG MAVNAVNAVNPTPLRLPSAIPTGKWISNARVCLPRKPPTQSTSSFNKNFRSRSNFSLKPSSSSLASVGNAGYVEEPSTNVKFSTSFTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPLEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSTSVDGPPAGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSVVLK
BLAST of CmaCh09G006840.1 vs. Swiss-Prot
Match: FAP3_ARATH (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.1e-74 Identity = 147/215 (68.37%), Postives = 170/215 (79.07%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12 Identity = 58/203 (28.57%), Postives = 94/203 (46.31%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.7e-12 Identity = 57/203 (28.08%), Postives = 90/203 (44.33%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. Swiss-Prot
Match: CFI_CALCH (Chalcone--flavonone isomerase (Fragment) OS=Callistephus chinensis GN=CHI PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.3e-11 Identity = 52/203 (25.62%), Postives = 89/203 (43.84%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.3e-11 Identity = 54/200 (27.00%), Postives = 87/200 (43.50%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TrEMBL
Match: A0A0A0L368_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 8.2e-118 Identity = 232/278 (83.45%), Postives = 244/278 (87.77%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TrEMBL
Match: E0CRY9_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g00100 PE=3 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.5e-90 Identity = 190/287 (66.20%), Postives = 218/287 (75.96%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TrEMBL
Match: M5WV36_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica GN=PRUPE_ppa011189mg PE=3 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 7.5e-87 Identity = 164/211 (77.73%), Postives = 184/211 (87.20%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TrEMBL
Match: A0A067EAL6_CITSI (Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649mg PE=3 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.3e-86 Identity = 173/242 (71.49%), Postives = 202/242 (83.47%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TrEMBL
Match: V4VR96_9ROSI (Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021578mg PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.9e-86 Identity = 180/276 (65.22%), Postives = 210/276 (76.09%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. TAIR10
Match: AT1G53520.1 (AT1G53520.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-75 Identity = 147/215 (68.37%), Postives = 170/215 (79.07%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. NCBI nr
Match: gi|659103018|ref|XP_008452432.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo]) HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118 Identity = 234/278 (84.17%), Postives = 245/278 (88.13%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. NCBI nr
Match: gi|449456545|ref|XP_004146009.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 431.4 bits (1108), Expect = 1.2e-117 Identity = 232/278 (83.45%), Postives = 244/278 (87.77%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. NCBI nr
Match: gi|659103021|ref|XP_008452433.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo]) HSP 1 Score: 420.6 bits (1080), Expect = 2.1e-114 Identity = 230/278 (82.73%), Postives = 241/278 (86.69%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. NCBI nr
Match: gi|778695591|ref|XP_011654021.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-113 Identity = 228/278 (82.01%), Postives = 240/278 (86.33%), Query Frame = 1
BLAST of CmaCh09G006840.1 vs. NCBI nr
Match: gi|359493644|ref|XP_002283758.2| (PREDICTED: fatty-acid-binding protein 3 [Vitis vinifera]) HSP 1 Score: 340.1 bits (871), Expect = 3.6e-90 Identity = 190/287 (66.20%), Postives = 218/287 (75.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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