CmaCh09G005290.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G005290.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Damaged dna-binding 2, putative isoform 1
Location	Cma_Chr09 : 2354366 .. 2355452 (-)
Sequence length	927

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCTACTAATCTCTCTCTCTCTACCAGAGAAGTCAGTACCAATCAGGCAACCGCCGCCGGTTGATGACAGCGAGCCCTAGTCCTTGGGCGTAGTCGGCGAGGAGAAGCAGAGCGGAGGAAGGTCGGAAGTCCGCCTCGCCTCACTAGTTAGACGGAGTCGATCTCCCGCTGTTAACTGATGGAGGTTATGTTCGGTCCTCCGACGTTCAACGTCGAGGTGGCGGCGGCCACGGCGTTTGACGGCGTCTCTCTTACGCCGGAGAATCCAGCCGCCGTAGTCGAGACTCAGAACCGAGGCCGGACGGGTTTTCGCGGCTCCGGATCTGATAGCTCGATTGGGGAAAATTCGTCGGGGAGTTCGTCGTCGATTGGAGTTCCTGACGGCGATTCTGATGACGACGGAGGCAGCGGTGAGGTTCAGAGCAAGTCGAAGGAAGGAGGATTATGCAGATTAGATTCTCTCGAAGACGCTCTTCCGATCAAGTGAGTTTCTCTATCTCTTAAATTTTTCCTCTCTTATAAACCAGAAACCAAAAATCGAAGTCGAGTCAGCGATTGAAATTTTAAACTTCCGATTAATCAAGTAATTTCGACGCTAATTAGCGATTTACAACTCTTTAATTTGATAAAATTTCTCCCGGAGGGGAAAATGGAATTGCAGAAGAGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGGAAAAGGATTTTAATGGCGTCGAAATGGTCTAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCCCTGGACGAAGACGAAGAAGAAAAGTATCACAAAGAAGCAGCTGCAGGTTCCGATTCAGAGGACAGAGATCGAGGAAGCGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAGAACGAACGACGAAGACGAACCCTAGGGCACAGGTTCCATGATCAGAAGCTCGTTAATGGCTTCAAATCCAAGAGCTGCTTTGATCTGCAGAATATGAACAGCGATAACTCGCTATGA

mRNA sequence

TCCCCTACTAATCTCTCTCTCTCTACCAGAGAAGTCAGTACCAATCAGGCAACCGCCGCCGGTTGATGACAGCGAGCCCTAGTCCTTGGGCGTAGTCGGCGAGGAGAAGCAGAGCGGAGGAAGGTCGGAAGTCCGCCTCGCCTCACTAGTTAGACGGAGTCGATCTCCCGCTGTTAACTGATGGAGGTTATGTTCGGTCCTCCGACGTTCAACGTCGAGGTGGCGGCGGCCACGGCGTTTGACGGCGTCTCTCTTACGCCGGAGAATCCAGCCGCCGTAGTCGAGACTCAGAACCGAGGCCGGACGGGTTTTCGCGGCTCCGGATCTGATAGCTCGATTGGGGAAAATTCGTCGGGGAGTTCGTCGTCGATTGGAGTTCCTGACGGCGATTCTGATGACGACGGAGGCAGCGGTGAGGTTCAGAGCAAGTCGAAGGAAGGAGGATTATGCAGATTAGATTCTCTCGAAGACGCTCTTCCGATCAAGGGAAAATGGAATTGCAGAAGAGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGGAAAAGGATTTTAATGGCGTCGAAATGGTCTAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCCCTGGACGAAGACGAAGAAGAAAAGTATCACAAAGAAGCAGCTGCAGGTTCCGATTCAGAGGACAGAGATCGAGGAAGCGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAGAACGAACGACGAAGACGAACCCTAGGGCACAGGTTCCATGATCAGAAGCTCGTTAATGGCTTCAAATCCAAGAGCTGCTTTGATCTGCAGAATATGAACAGCGATAACTCGCTATGA

Coding sequence (CDS)

ATGGAGGTTATGTTCGGTCCTCCGACGTTCAACGTCGAGGTGGCGGCGGCCACGGCGTTTGACGGCGTCTCTCTTACGCCGGAGAATCCAGCCGCCGTAGTCGAGACTCAGAACCGAGGCCGGACGGGTTTTCGCGGCTCCGGATCTGATAGCTCGATTGGGGAAAATTCGTCGGGGAGTTCGTCGTCGATTGGAGTTCCTGACGGCGATTCTGATGACGACGGAGGCAGCGGTGAGGTTCAGAGCAAGTCGAAGGAAGGAGGATTATGCAGATTAGATTCTCTCGAAGACGCTCTTCCGATCAAGGGAAAATGGAATTGCAGAAGAGGATTATCGAGCCATTTCTCGGGGAAATCGAAGTCGTTTGCGAATCTATCAGAGGTGATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAACAAGAGGAAAAGGATTTTAATGGCGTCGAAATGGTCTAGAAAAGCTTCGTTCTACAACTGGCCAAACCCTAAATCGATGCCTCTGTTAGCCCTGGACGAAGACGAAGAAGAAAAGTATCACAAAGAAGCAGCTGCAGGTTCCGATTCAGAGGACAGAGATCGAGGAAGCGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAGAACGAACGACGAAGACGAACCCTAGGGCACAGGTTCCATGATCAGAAGCTCGTTAATGGCTTCAAATCCAAGAGCTGCTTTGATCTGCAGAATATGAACAGCGATAACTCGCTATGA

Protein sequence

MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKSKSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPNPKSMPLLALDEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGFKSKSCFDLQNMNSDNSL

Homology

[Close]

BLAST of CmaCh09G005290.1 vs. TrEMBL
Match: A0A0A0LEH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881860 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.0e-71
Identity = 167/242 (69.01%), Postives = 185/242 (76.45%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGS 60
           MEV+FGPPTF++EV  ++AF  VSL  ENP+A  +TQN  R+GF  SGS SSIGENSS S
Sbjct: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAA-DTQNLARSGFLRSGSGSSIGENSSES 60

Query: 61  SSSIGVPDGDSDDDGGSG-EVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKS 120
           SSSIGVPDGDSDDDGG G EVQSK KEGGLC L+SLE ALPIK      RGLSSHFSGKS
Sbjct: 61  SSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIK------RGLSSHFSGKS 120

Query: 121 KSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEE 180
           KSFANLSEVIQVKDLEK ENPFNKR+RILMASKWSR K SFYNWPNPKSMPLLAL+E+ E
Sbjct: 121 KSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNE 180

Query: 181 EKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGFKSKSCFD 240
           E+  +E              D ++  +E DE    RRR+LG RFHD KLVNG K KSCFD
Sbjct: 181 EEEEEE-------------EDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFD 222

[Close]

BLAST of CmaCh09G005290.1 vs. TrEMBL
Match: A0A067KMD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07026 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 111/261 (42.53%), Postives = 155/261 (59.39%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAF------DGVSLTPENPAAVVETQN------RGRTGFR-GS 60
           ME++ GP TF++EV++ T +      D    +   P   ++ +       +G    R GS
Sbjct: 1   MEILVGP-TFSIEVSSPTPYVVPPSQDKHHTSAAAPCIFLKEEEDDNDVAQGMISSRIGS 60

Query: 61  GSDSSIGENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNC 120
           G + +  ++SS +SSSIG PD   +D+     V S   +GGL  LDSLE++LPIK     
Sbjct: 61  GIEINGPDDSSDNSSSIGAPDDSEEDEEEVNSVLSS--KGGLGSLDSLEESLPIK----- 120

Query: 121 RRGLSSHFSGKSKSFANLSE---VIQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPN 180
            RGLS+HF+GKSKSFAN+S+   V  VKDLEKPENPFNKR+RILMA+KWSRK+SFY+W N
Sbjct: 121 -RGLSNHFAGKSKSFANISDMSIVSTVKDLEKPENPFNKRRRILMATKWSRKSSFYSWRN 180

Query: 181 PKSMPLLALDEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHD 240
           PKSMPLLAL+E EE+ +  E               EE+++DE    +   ++    +  D
Sbjct: 181 PKSMPLLALNEQEEDDHAPE--------------QEEEDDDEASPTSSSDQQPKLSKLQD 238

Query: 241 QKLVNGFKSKSCFDLQNMNSD 246
           +K  N FK  SCF L ++  +
Sbjct: 241 RKFKNSFKCHSCFSLADLQQE 238

[Close]

BLAST of CmaCh09G005290.1 vs. TrEMBL
Match: B9RNM6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0918990 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32
Identity = 101/205 (49.27%), Postives = 130/205 (63.41%), Query Frame = 1


Query: 51  SSIGENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRG 110
           + + +NS+ SSSSIG PD DSD++G   +  S S +G +  LD+LED+LPIK      RG
Sbjct: 56  NELDDNSTDSSSSIGAPD-DSDEEGEEVDSGSSSSKGAIVSLDALEDSLPIK------RG 115

Query: 111 LSSHFSGKSKSFANLSEVIQ----VKDLEKPENPFNKRKRILMASKW-SRKASFYNWPNP 170
           LS+HF+GKSKSF NLS+V      VKDL KPENPFNKR+R LMA+KW  RK+SFY+W NP
Sbjct: 116 LSNHFAGKSKSFTNLSDVSSSVNTVKDLVKPENPFNKRRRTLMANKWYRRKSSFYSWSNP 175

Query: 171 KSMPLLALDEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENE-----RRRRTLGH 230
           KSMPLLAL E+EEE+   +               EE E +EE+E+NE     RR+     
Sbjct: 176 KSMPLLALAEEEEEEEEAQQLDHRRHHHHHLHHQEESESEEEEEDNEESSHPRRQLPKLS 235

Query: 231 RFHDQKLVNGFKSKSCFDLQNMNSD 246
           +  D+K    FKS SCF L ++  D
Sbjct: 236 KLQDRKFRTSFKSHSCFSLTDLQED 253

[Close]

BLAST of CmaCh09G005290.1 vs. TrEMBL
Match: A0A061GI86_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036829 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 112/257 (43.58%), Postives = 155/257 (60.31%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAF------DGVSLTPENPAAV-VETQNRGRTGFRGSGSDSSI 60
           MEV+ G  TF +EVAA+  +      + +S +    A + ++  + G     G G+ S +
Sbjct: 1   MEVLVGS-TFGIEVAASATYVRDRPQEKISSSSSAAACLFIKEHDAGGADPTGEGTGSDL 60

Query: 61  G--ENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGL 120
           G  E SS SSSSIG P GDSDD+   G V S    GGL  L S+ED+LPIK      RGL
Sbjct: 61  GSPELSSESSSSIGAP-GDSDDEEEEGVVSSGGS-GGLASLVSIEDSLPIK------RGL 120

Query: 121 SSHFSGKSKSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPNPKSMPLL 180
           S+H++GKSKSFANLS++  V+DL+KPENPFNKR+R+L+A+KWSRK+SFY+W NP SMPLL
Sbjct: 121 SNHYAGKSKSFANLSDISSVEDLQKPENPFNKRRRVLLANKWSRKSSFYSWRNPNSMPLL 180

Query: 181 ALDEDEEEKYHKEAAAGSDSEDRDRG--SDEEDEEDEEDEENERRRRTLGHRFHDQKLVN 240
           AL+ED+EE          D ED++    S         D+ +   ++    +    KL  
Sbjct: 181 ALNEDDEE----------DGEDKETPSISSSSSSSSSNDKLSVAAQKP---KLQQSKLKA 235

Query: 241 GFKSKSCFDLQNMNSDN 247
            FKS+SCF L ++  ++
Sbjct: 241 TFKSQSCFSLTDLQVEH 235

[Close]

BLAST of CmaCh09G005290.1 vs. TrEMBL
Match: V7AUZ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G101800g PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-29
Identity = 99/217 (45.62%), Postives = 132/217 (60.83%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGS 60
           MEV+ GP  F ++V A+   DG S   E+   +  +    R+ FR SG         S S
Sbjct: 1   MEVLLGP-AFTIDVPASPPLDGNS---EDRIFLNGSPENDRSNFRISGPSKFFTGGESES 60

Query: 61  SSSIGVPDGDSDDDGGSGEVQSKSK-EGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKS 120
           SSSIG PD   D D    EVQSK K   GL  L+++ED+LPIK      RGLSSHF GKS
Sbjct: 61  SSSIGTPD---DSDNEEEEVQSKLKIRTGLGSLNAMEDSLPIK------RGLSSHFDGKS 120

Query: 121 KSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPNPKSMPLLALDEDEEE 180
           KSF++LS+V  +K+L+K E+PFNKR+R+L+ASKWSR++SFY+W NP+SMPLL + E    
Sbjct: 121 KSFSDLSQVSALKELQKQESPFNKRRRVLIASKWSRRSSFYSWSNPQSMPLLPVVE---- 180

Query: 181 KYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRR 217
                          DR  D++D E+EE+EE E+ R+
Sbjct: 181 ---------------DRDDDDDDYEEEEEEEEEKARK 185

[Close]

BLAST of CmaCh09G005290.1 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 93/251 (37.05%), Postives = 137/251 (54.58%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSD---SSIGENS 60
           ME+M   PTF++EV+     D +  T +  ++    +     G   SG     S    + 
Sbjct: 1   MELM-AKPTFSIEVSQYGTTD-LPATEKASSSSSSFETTNEEGVEESGLSRIWSGQTADY 60

Query: 61  SGSSSSIGVPDGDSDDDGGSGEVQS---KSKE---GGLCRLDSLEDALPIKGKWNCRRGL 120
           S  SSSIG P GDS++D    E ++    SKE    GL  + SLED+LP K      RGL
Sbjct: 61  SSDSSSIGTP-GDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSK------RGL 120

Query: 121 SSHFSGKSKSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPNPKSMPLL 180
           S+H+ GKSKSF NL E+  VK++ K ENP NKR+R+ + +K +RK SFY+W NPKSMPLL
Sbjct: 121 SNHYKGKSKSFGNLGEIGSVKEVAKQENPLNKRRRLQICNKLARK-SFYSWQNPKSMPLL 180

Query: 181 ALDEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGF 240
            ++EDE++          D ++ D  S  ++ +   DEE  ++       F ++     +
Sbjct: 181 PVNEDEDDD-------DEDDDEEDLKSGFDENKSSSDEEGVKKVVVRKGSFKNR----AY 230

Query: 241 KSKSCFDLQNM 243
           KS+SCF L ++
Sbjct: 241 KSRSCFALSDL 230

[Close]

BLAST of CmaCh09G005290.1 vs. TAIR10
Match: AT2G24550.1 (AT2G24550.1 unknown protein)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-18
Identity = 90/262 (34.35%), Postives = 138/262 (52.67%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATA-FDGVSLTP---ENPAAVVETQNRGRT----GFRGSGSDSS 60
           MEVM G  +F + +AA      GVS      +    + +   RG +    G R S +++ 
Sbjct: 1   MEVMVGS-SFGIGMAAYVRDHRGVSAQDKAVQTALFLADESGRGGSQIGIGLRMSNNNNK 60

Query: 61  IGENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDS-LEDALPIKGKWNCRRGL 120
             E SS SSSSIG    + +++     V  +   G L    S LED+LPIK      RGL
Sbjct: 61  SPEESSDSSSSIGESSENEEEEEEDDAVSCQ--RGTLDSFSSSLEDSLPIK------RGL 120

Query: 121 SSHFSGKSKSFANLSEVI-QVKDLEKPENPFNKRKRILMASKWSRK------ASFYNWPN 180
           S+H+ GKSKSF NL E   + KDLEK ENPFNKR+R+++A+K  R+      ++FY+W N
Sbjct: 121 SNHYVGKSKSFGNLMEAASKAKDLEKVENPFNKRRRLVIANKLRRRGRSMSASNFYSWQN 180

Query: 181 PKSMPLLALDEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHD 240
           P SMPLLAL E  EE +H                   D+ +++D + +  R+ +    + 
Sbjct: 181 PNSMPLLALQEPNEEDHH----------------IHNDDYEDDDGDGDDHRKIMMMMKNK 235

Query: 241 QKLVNGFKSKSCFDLQNMNSDN 247
           ++L+   +++SCF L ++  ++
Sbjct: 241 KELM--AQTRSCFCLSSLQEED 235

[Close]

BLAST of CmaCh09G005290.1 vs. TAIR10
Match: AT4G31510.1 (AT4G31510.1 unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-14
Identity = 88/251 (35.06%), Postives = 119/251 (47.41%), Query Frame = 1


Query: 12  VEVAAATAF-DGVSLTPENPAAVVETQNRGRTGFRGSG------SDSSIGENSSGSSSSI 71
           +EV   + F D  S+T  + A  V      R G R  G      S SS+GE S       
Sbjct: 1   MEVLVGSTFRDRSSVTTHDQA--VPASLSSRIGLRRCGRSPPPESSSSVGETSENEE--- 60

Query: 72  GVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKSKSFAN 131
                D DD   S + +  +         SLED+LPIK      RGLS+H+ GKSKSF N
Sbjct: 61  -----DEDDAVSSSQGRWLNSFSS-----SLEDSLPIK------RGLSNHYIGKSKSFGN 120

Query: 132 LSEVIQVKDLEKPENPFNKRKRILMASKWSRKA-----SFYNWPNPKSMPLLALDEDEEE 191
           L E     DL K E+P NKR+R+L+A+K  R++     S Y   NP SMPLLAL E    
Sbjct: 121 LMEASNTNDLVKVESPLNKRRRLLIANKLRRRSSLSSFSIYTKINPNSMPLLALQE---- 180

Query: 192 KYHKEAAAGSDSEDRDRGSDEEDEEDEEDEE----NERRRRTLGHRFHDQKLVNGFKSKS 247
                    SD+ED     D++D++   D+E     E+R +   HR     +V   ++KS
Sbjct: 181 ---------SDNEDHKLNDDDDDDDSSSDDETSKLKEKRMKMTNHR---DFMVP--QTKS 212

[Close]

BLAST of CmaCh09G005290.1 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 1


Query: 56  NSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHF 115
           +SS SS SIG  +   DD+GG  E++S S  G L  ++SLE+ALPIK      R +S  +
Sbjct: 22  SSSTSSDSIG--ENSDDDEGGENEIES-SYNGPLDMMESLEEALPIK------RAISKFY 81

Query: 116 SGKSKSFANLSEV--IQVKDLEKPENPFNKRKRILMASKWSRKASFYNWPNPKSMPLLAL 175
            GKSKSF +LSE   + VKDL KPEN +++R+R L++ +   +      P      +LA+
Sbjct: 82  KGKSKSFMSLSETSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKP---FKSVLAM 141

Query: 176 DEDEEEKYHKEAAAGSDS 192
            + E +     +++G DS
Sbjct: 142 SQREGD----SSSSGDDS 143

[Close]

BLAST of CmaCh09G005290.1 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 6.0e-10
Identity = 50/131 (38.17%), Postives = 68/131 (51.91%), Query Frame = 1


Query: 47  SGSDSSIGENSSGSSSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWN 106
           S + SSIG NS     S      D  DD G  EV+S  K G L  ++SLE  LP+     
Sbjct: 38  SSASSSIGRNSDDGEKS----SEDGGDDAGENEVESPYK-GPLEMMESLEQVLPV----- 97

Query: 107 CRRGLSSHFSGKSKSFAN--------LSEVIQVKDLEKPENPFNKRKRILMASKWSRKAS 166
            R+G+S ++SGKSKSF N        L+    +KDL KPENP+++R+R L+  +      
Sbjct: 98  -RKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQ------ 149

Query: 167 FYNWPNPKSMP 170
              W N K+ P
Sbjct: 158 --IWENNKTTP 149

[Close]

BLAST of CmaCh09G005290.1 vs. NCBI nr
Match: gi|659132632|ref|XP_008466301.1| (PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 2.6e-76
Identity = 172/241 (71.37%), Postives = 187/241 (77.59%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGS 60
           MEV+ GPPTF++EV   +AF GVSL  ENP+A  E QN  R+GF  SGS SSIGENSS S
Sbjct: 1   MEVLLGPPTFSIEVPPPSAFSGVSLPSENPSA-AEAQNLARSGFLRSGSGSSIGENSSES 60

Query: 61  SSSIGVPDGDSDDDGGSGEVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKSK 120
           SSSIGVPDGDSDDDGG  EVQSK KEGGLC L+SLE ALPIK      RGLSSHFSGKSK
Sbjct: 61  SSSIGVPDGDSDDDGGGDEVQSKRKEGGLCGLESLEKALPIK------RGLSSHFSGKSK 120

Query: 121 SFANLSEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEEE 180
           SFANLSEVIQVKDLEKPENPFNKR+RILMASKWSR KASFYNWPNPKSMPLLAL+E++E+
Sbjct: 121 SFANLSEVIQVKDLEKPENPFNKRRRILMASKWSRKKASFYNWPNPKSMPLLALNENDEQ 180

Query: 181 KYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGFKSKSCFDL 240
           K  ++            G D  +E DEEDE    RRR LG RFHD KLVNGFK KSCFDL
Sbjct: 181 KQEED------------GKDSGEESDEEDEGKGGRRRNLGQRFHDGKLVNGFKFKSCFDL 222

[Close]

BLAST of CmaCh09G005290.1 vs. NCBI nr
Match: gi|778687234|ref|XP_004136309.2| (PREDICTED: uncharacterized protein LOC101218277 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 1.5e-71
Identity = 167/242 (69.01%), Postives = 185/242 (76.45%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAFDGVSLTPENPAAVVETQNRGRTGFRGSGSDSSIGENSSGS 60
           MEV+FGPPTF++EV  ++AF  VSL  ENP+A  +TQN  R+GF  SGS SSIGENSS S
Sbjct: 1   MEVLFGPPTFSIEVPPSSAFSAVSLPSENPSAA-DTQNLARSGFLRSGSGSSIGENSSES 60

Query: 61  SSSIGVPDGDSDDDGGSG-EVQSKSKEGGLCRLDSLEDALPIKGKWNCRRGLSSHFSGKS 120
           SSSIGVPDGDSDDDGG G EVQSK KEGGLC L+SLE ALPIK      RGLSSHFSGKS
Sbjct: 61  SSSIGVPDGDSDDDGGGGDEVQSKPKEGGLCGLESLEKALPIK------RGLSSHFSGKS 120

Query: 121 KSFANLSEVIQVKDLEKPENPFNKRKRILMASKWSR-KASFYNWPNPKSMPLLALDEDEE 180
           KSFANLSEVIQVKDLEK ENPFNKR+RILMASKWSR K SFYNWPNPKSMPLLAL+E+ E
Sbjct: 121 KSFANLSEVIQVKDLEKAENPFNKRRRILMASKWSRKKGSFYNWPNPKSMPLLALNENNE 180

Query: 181 EKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERRRRTLGHRFHDQKLVNGFKSKSCFD 240
           E+  +E              D ++  +E DE    RRR+LG RFHD KLVNG K KSCFD
Sbjct: 181 EEEEEE-------------EDGKESGEESDEGKGGRRRSLGQRFHDGKLVNGLKFKSCFD 222

[Close]

BLAST of CmaCh09G005290.1 vs. NCBI nr
Match: gi|1009175260|ref|XP_015868785.1| (PREDICTED: uncharacterized protein LOC107406195 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 161.0 bits (406), Expect = 2.7e-36
Identity = 123/268 (45.90%), Postives = 168/268 (62.69%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAF----DGVSLTPENPAAVVET---QNRGRTG--FRGSGSDS 60
           MEV+ GP TF ++V+++ A+     G +   E  AAV      ++ G  G   R SG + 
Sbjct: 1   MEVLLGP-TFTIDVSSSPAYARDRGGAATAQEKHAAVASCLFLKDDGVVGSDIRISGKEK 60

Query: 61  SIGEN-SSGSSSSIGVPDGDSDD--------DGGSGEVQSKSKEGG----LCRLDSLEDA 120
              ++ SS SSS+IGVPD DSD+        DGGS EVQSK   GG    L  L SLE+ 
Sbjct: 61  PRSDDESSDSSSTIGVPD-DSDEEDDASSKGDGGSDEVQSKFSRGGGFGSLGSLSSLEET 120

Query: 121 LPIKGKWNCRRGLSSHFSGKSKSFANLSEVI---QVKDLEKPENPFNKRKRILMASKWSR 180
           LPI      RRGLS++FSGKSKSFANLS+V     VK +EK ENPFNKR+R+L+A+KWSR
Sbjct: 121 LPIN-----RRGLSNYFSGKSKSFANLSDVSAVNNVKQVEKAENPFNKRRRVLIAAKWSR 180

Query: 181 KASFYNWPNPKSMPLLAL-DEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERR 240
           K+SFYNWPNPKSMPLLAL +ED++ +     ++ +D E + +  + ED + ++DE +E  
Sbjct: 181 KSSFYNWPNPKSMPLLALNEEDDDGEQESPQSSFADKEQKRQQHEHEDHDGDDDEHHEEE 240

Query: 241 RRTLGHRFHDQKLVNGFKSKSCFDLQNM 243
              L  +  + + +N FKSKSCF L ++
Sbjct: 241 TEGLA-KLRETRKLNSFKSKSCFSLTDL 260

[Close]

BLAST of CmaCh09G005290.1 vs. NCBI nr
Match: gi|1009172423|ref|XP_015867263.1| (PREDICTED: uncharacterized protein LOC107404779 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36
Identity = 123/268 (45.90%), Postives = 168/268 (62.69%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAF----DGVSLTPENPAAVVET---QNRGRTG--FRGSGSDS 60
           MEV+ GP TF ++V+++ A+     G +   E  AAV      ++ G  G   R SG + 
Sbjct: 1   MEVLLGP-TFTIDVSSSPAYARDRGGAATAQEKHAAVASCLFLKDDGVVGSDIRISGKEK 60

Query: 61  SIGEN-SSGSSSSIGVPDGDSDD--------DGGSGEVQSKSKEGG----LCRLDSLEDA 120
              ++ SS SSS+IGVPD DSD+        DGGS EVQSK   GG    L  L SLE+ 
Sbjct: 61  PRSDDESSDSSSTIGVPD-DSDEEDDASSKGDGGSDEVQSKFSRGGGFGSLGSLSSLEET 120

Query: 121 LPIKGKWNCRRGLSSHFSGKSKSFANLSEVI---QVKDLEKPENPFNKRKRILMASKWSR 180
           LPI      RRGLS++FSGKSKSFANLS+V     VK +EK ENPFNKR+R+L+A+KWSR
Sbjct: 121 LPIN-----RRGLSNYFSGKSKSFANLSDVSAVNNVKQVEKAENPFNKRRRVLIAAKWSR 180

Query: 181 KASFYNWPNPKSMPLLAL-DEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERR 240
           K+SFYNWPNPKSMPLLAL +ED++ +     ++ +D E + +  + ED + ++DE +E  
Sbjct: 181 KSSFYNWPNPKSMPLLALNEEDDDGEQEAPQSSFADKEQKRQQHEHEDHDGDDDEHHEEE 240

Query: 241 RRTLGHRFHDQKLVNGFKSKSCFDLQNM 243
              L  +  + + +N FKSKSCF L ++
Sbjct: 241 TEGLA-KLRETRKLNSFKSKSCFSLTDL 260

[Close]

BLAST of CmaCh09G005290.1 vs. NCBI nr
Match: gi|1009175262|ref|XP_015868786.1| (PREDICTED: uncharacterized protein LOC107406195 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36
Identity = 123/268 (45.90%), Postives = 168/268 (62.69%), Query Frame = 1


Query: 1   MEVMFGPPTFNVEVAAATAF----DGVSLTPENPAAVVET---QNRGRTG--FRGSGSDS 60
           MEV+ GP TF ++V+++ A+     G +   E  AAV      ++ G  G   R SG + 
Sbjct: 1   MEVLLGP-TFTIDVSSSPAYARDRGGAATAQEKHAAVASCLFLKDDGVVGSDIRISGKEK 60

Query: 61  SIGEN-SSGSSSSIGVPDGDSDD--------DGGSGEVQSKSKEGG----LCRLDSLEDA 120
              ++ SS SSS+IGVPD DSD+        DGGS EVQSK   GG    L  L SLE+ 
Sbjct: 61  PRSDDESSDSSSTIGVPD-DSDEEDDASSKGDGGSDEVQSKFSRGGGFGSLGSLSSLEET 120

Query: 121 LPIKGKWNCRRGLSSHFSGKSKSFANLSEVI---QVKDLEKPENPFNKRKRILMASKWSR 180
           LPIK      RGLS++FSGKSKSFANLS+V     VK +EK ENPFNKR+R+L+A+KWSR
Sbjct: 121 LPIK------RGLSNYFSGKSKSFANLSDVSAVNNVKQVEKAENPFNKRRRVLIAAKWSR 180

Query: 181 KASFYNWPNPKSMPLLAL-DEDEEEKYHKEAAAGSDSEDRDRGSDEEDEEDEEDEENERR 240
           K+SFYNWPNPKSMPLLAL +ED++ +     ++ +D E + +  + ED + ++DE +E  
Sbjct: 181 KSSFYNWPNPKSMPLLALNEEDDDGEQESPQSSFADKEQKRQQHEHEDHDGDDDEHHEEE 240

Query: 241 RRTLGHRFHDQKLVNGFKSKSCFDLQNM 243
              L  +  + + +N FKSKSCF L ++
Sbjct: 241 TEGLA-KLRETRKLNSFKSKSCFSLTDL 259

The following BLAST results are available for this feature:

BLAST of CmaCh09G005290.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G005290.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEH9_CUCSA	1.0e-71	69.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881860 PE=4 SV=1	[more]
A0A067KMD7_JATCU	2.5e-33	42.53	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07026 PE=4 SV=1	[more]
B9RNM6_RICCO	2.1e-32	49.27	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0918990 PE=4 SV=1	[more]
A0A061GI86_THECC	1.4e-31	43.58	Uncharacterized protein OS=Theobroma cacao GN=TCM_036829 PE=4 SV=1	[more]
V7AUZ4_PHAVU	2.2e-29	45.62	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G101800g PE=4 SV=1	[more]

BLAST of CmaCh09G005290.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24890.1	1.2e-21	37.05	unknown protein	[more]
AT2G24550.1	5.9e-18	34.35	unknown protein	[more]
AT4G31510.1	4.0e-14	35.06	unknown protein	[more]
AT3G43850.1	2.0e-10	38.41	unknown protein	[more]
AT5G21940.1	6.0e-10	38.17	unknown protein	[more]

BLAST of CmaCh09G005290.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132632\|ref\|XP_008466301.1\|	2.6e-76	71.37	PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo]	[more]
gi\|778687234\|ref\|XP_004136309.2\|	1.5e-71	69.01	PREDICTED: uncharacterized protein LOC101218277 [Cucumis sativus]	[more]
gi\|1009175260\|ref\|XP_015868785.1\|	2.7e-36	45.90	PREDICTED: uncharacterized protein LOC107406195 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009172423\|ref\|XP_015867263.1\|	3.5e-36	45.90	PREDICTED: uncharacterized protein LOC107404779 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009175262\|ref\|XP_015868786.1\|	3.5e-36	45.90	PREDICTED: uncharacterized protein LOC107406195 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G005290	CmaCh09G005290	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G005290.1	CmaCh09G005290.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G005290.1.CDS.2	CmaCh09G005290.1.CDS.2	CDS
CmaCh09G005290.1.CDS.1	CmaCh09G005290.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G005290.1.five_prime_UTR.1	CmaCh09G005290.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G005290.1.exon.2	CmaCh09G005290.1.exon.2	exon
CmaCh09G005290.1.exon.1	CmaCh09G005290.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 47..246 score: 3.4
None	No IPR available	PANTHER	PTHR33172:SF15	SUBFAMILY NOT NAMED	coord: 47..246 score: 3.4