CmaCh09G000330.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G000330.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RING-H2 finger protein 2B
Location	Cma_Chr09 : 151504 .. 156567 (-)
Sequence length	1752

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCTGCCATCTCCGACTCGGCTGAGCCCCAGACTTATGACTCTGACTTCGTCATAATCCTAGCTGCCCTCCTCTGTGCCTTGATATGCGTTCTCGGTCTAGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCACCTTGCCGGCAATGTCAGCGGCGGCGCTTCCACTCGTCCTCCTCCTCCTCCTCCTCCTGCGTCCAATAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACAACTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCAATCGGTGATGAAATCCGGGTGCTGCCACAGTGCGGCCATGGGTTTCACGTGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCATGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAGAAGTGCGGTGGTTTTCCGGCAAGCTCGAGTTCTAACGGTGGGACGGAATCCAGAGTGAAAGAGGGAGGAGATGGTAAGATGAGTAGATTCTTACCTTAGCCCTAGGGTGTTTCCTTTAACTACTGCGATTCTTGTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCGTGTTGTAAATAGCTTTCTTAGTCAAATTCATGTAATTACTAGAAATTGTTTATGAAATCAAGTTGAAGCAAAGGTGATTCCAATGAATTTGAAATCGGCCGCTCTGGTAGATCTGTTGTGATTATTGACTTCAAATCTGTCGTCGATTTTCAGCCTCGGATTGAAATGGAGATGGCATGAATTTACAATACAGGCGAGGAGTTGAAATCAAAAAGGGGAAAGGGGAAACTCCAAACAAATGGATATTTTGTTCCCATTTTCGCCAGCTTTTTACCTGTCAAATTAAATATTTTAAACTAACTTTCAATCTACGCATCGTTTTTCAAATAAATCTTTTTATTGGCCCACAAAAATTAGCACTTTCTCTTTAATCCTTCCACGAAGGTGGTATGTACATACAGCCTATATCTGTTTGATTGTCTTAAGTTTTTACATAAAAACTCTTTTATTGACTTTACGAAAGAGAAGCGAATAAGTAATTCATATTTCTCAATTGGTTTTCATAATTTTGAGTTAAATTGGTCGATTTTGCTAATCTCGTGATTTTTTGTGGAGTGTAGTTAGATCATAGTCAAGGTATTGATAGTGAGTGAAGATAGATTTTGTTGGGTTTTTAAAAATGCATTTGTTGGGAGTGTGTTAGCCAGAACTGGTAAAGAATTGGCTGGAATTGCATTATGGGGGCTAACTTTGCTCTTAATCTTCCTTCAAAGACAAACTGTCAATGAATGGATTGATTGGATTATGTATATATAAATGTAATGCAAACAAACTGCAGTTACACCCACTAACTAATTCCTACTTTTAAAACCTAAACTGCAACATACTTTTACTTATTTATTTTTTGGTCCTCCAACGCCACACTATCAAATATTGCGGCCCTTTCCGTCCTTTAAGAAAATGGTCCCTTTAATTTGACCAAAAAAAAAGACGGCATTCATCGTAATATGAATGGATAAATTAGTATTTTTAAAGAGGTGAGTTAGCACAACTTTATAATTTTTCTCAGACCATTATAACCTAAACTTGGTTTGTTAGGTCAAAACTTAAAATATTTGTTTTTGTAAACAAAAGTCCAAAAGTCAATTTTATTATTCCATCGCGTTTCCAGCAGTCCAATAAAATAAAATAATATAATGAAAACCCCCACCCACATGGGTACCATGTCATTCAATTATGGCCCACGTGGCAAAGACTCAACCAAGAAATAAATCTCATTCATTTTCTTTTCAAATCAGGATGCTATTGCACAGTGTCGACTTTCCAAATAACATTAAGCTTTGAAAAAAACTAATTAAAAGACTCTTCTTTTGGAGTTAATGAAAATATACAGAGAGTTTTGCCCAATGACATGTGAACTATGTCATATTTGACACAACGGGCCTGATTATTTCTTAGGGATTGGACTAAAAATGATTTTTTCTGTAAAAGAGAAAAAAGAGAAGGAAAAAATATATTCATAAAAAAGTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCGTCTTGTTGTATTCTTTAATGTAATTATATATACTTTTTTTTTTCCATTTGCATTTCTCATCCAGTCATTTGGATACGAAACGAAGATACTCTTGCAAAACCCTATCCTCCCCGGATCCTTGATTTGCTATGGCACCTCTGTGCATTTTCCTGCCTCCAACATTCTGATTCCCCATCTTACTTTCTTTCAGTATGTTTTCCTGCTCATGTAATGGCATCCAATTGGACTCTGCGGTTACATTCTTATTCTTTCCAGGTAATCGCTCCGCTTGTCTTCTTTTGATTTTATCATGAAATATTCTCTGCTATGTTTATGAACTTTCTAGATCATGTGTGCAGCCATACGTATGGGTTGGAAAGCCTCTTGTTCTGTCCGTCTTATCCGAACTCGGAATTGGTTATAAATGCGCTGGCATTAGATATGGTCATTTCAACATTAACCGGAATCGGCATCGAATTGGTCGCAGATTTCTAATAAATTCGGCTGAGGGGTCCGGGAGCACTGATTCCGGGCGAAATGTCGAAGATGATGAAATTATGGTCAAGAGTGGGACTGGTGGTGTAGCTTCCAGAGATTACAAGGGGAAATTGCAGGAGATGATTTATTCGTCGCCTCCAGGCGTTTTCCTTGTAAGTTTCTGGTTGATTAGGAGTTTGTGGCTCTTCCTTCTTTATAGTTTTTTGTACTTTCGAGAATGGCGTTTGCAAGGATTATCTTCTTTCTGTTATGTTCGCAATTTAAACCTCTTACCGCAATTCATTGAGTTCTGTCTCCTGAATGGGCATGGATCATTACCCTGATACTTCTTGGGCTACGTGTGCAACCTGTGTTTCGTCATGAATGATTTTGGGCAAATGTTTTATGATATCAACGGAATTGATATAATCAAATGCAGGTTCTGAACGCAATGAATTATATACAATTTGCGAAAATGTATAGTGTCTTTTGTTTTAAGCCCTACACTATAGTGAATGAACTCTTAAGCACAAATCATGCCTTTTATTTTCGAGTTACGGGTGTCTTACTCTCTTGTTCTATTCCGCCTTAGATGAACAGATGTACTGGAAATGGTCTTGCAATTGGGTTTTGCATTGCGACGGCTTGTTTAGCAATAGTTGCAAGAGTGTATTTGATGGGAAAATCCAGGAGCAGTCATTCCGGATCAGTGGCTGATCTAGTCAGGCGTGGTCAGCTAAGATCTGACAGAAGAGGCATGTATGATTTAAGTCTTTGGAACCTTTGTCCTTGGAACATGCTAATATGTTTGTTATATCCTATTTCCATTATTTTCTTATAATTTCCTCTGTTATCGCCATTTTTTTGCAGTTCCAAACCTTTAAAATACAATGATCCCTTTAACAATCCATTGGTGAAGGTTGACCAAAGCAATTCTTCCGTAGAAATGTGTGGAAAGGTTTATCGGTTGGCCCCGGTTACTCTTACGAAGGAAGAACAAAGTATTCATCAGAAACGGAGGTCTCGGGCATATCAGTGGAAGAGACCAACCATGTTTCTTAAGGAAGGAGATTCAATTCCTCCTGATGTTAACCCTGATACAATCAGTTGGATCCCTGCAAACCATCCGTTTGCAACAACATCTAGTGATATTGATGAAGACTTGGCCCAGAACAATGTGCACCAAAAGCATGGTGTTCCCTTCCGTATTCAGGCCGAGCATGACGCTTTGCAGAGAAAGCTTGAAGCGCTCCAGGGTGTGAGTAACTCTGATACTCTGTACTCGATTCTGTCTTGTCTTCATGCTCTTCCTTCAGTTGATAGATTCATATATAACATTTGCTGCGTGGTAATGGTGAGTGAATATGTTCGTTCCATGATGGAATTGATGACCCACAAAAAGTTCATATAGACAACCTAACACGGTTCTCTCCCTGGTAGATGCTGTTTTGTGTAGCAAAACGAATGCCCTGTCCATCTCTTCATCTTTTGTCATTTTGTGCGAGTTTACCATATTATCCTCTCTTTTAACCAGCCAATTCCCTTCCTAAAGATGTTAAAAGCATTTCATCTATTTCTTCCAAGTCTGATCCGTTTCACATTCAATGGACACCCCTTCGACTTCAAGAAGGGGAAGATTCCTTGGATTCAATTATTTGAGCCCTTTCTGGGACCACATGGTTAGAAAAAAAAATAGAAGAGATTTTTAGGATTAAGATTCTTTTGCCTTTTTTGAGATTCTTTCACTTTTGTTACTCATTATTTGGTGTTGAAAATTATGCGCGACTCCATTGAAATTATTTTTTAAATTCTTTTTCTCCAGGCTGAAGTGTTCTTTAAATATATCTTCCTTTGCTAGTTGGGCTCCTCTCTCCTTTTGCGATTTCATTACTTCAATGAAATCCATCACCATTTGGTATTTGGTTTTTAGTTTTCACACTGTGACCTACAATGAAATCCTCTCTTCTTGTGATGCGTAGTGAGTATTTTAATCTCAATTAAAGTTGTCATTTTGATTTCTTATCATTAGTTTGTTCGATAAATGATGATTTTTTGTTCTCATTTCCTTTCTTTTACCCGGTTCTTGTGTTCCCCGATCATGGAAAATTTCCAGTGATGATGCCATTTAGATATGGTTACCAAGTGATAGTGTAGATGGCTGTCCATTACATTGTCTTATGAGTCGCCCTTACACATTCATATTTACATTTTCTGCAGGAACAGAAACTGAATAATTTATTTATAGATCCTAGAGATGGGAAGGATTTTGAGAGACCTGTTGAGTCCAAACCCAACTCTGATGAACAAGTAGAACAAAGCTTTACAGACCACCAAGCTGGAGAGTCGAAGCCTCCAAACTCGGGACATCTCCCAAGCTCTTTCGGGGTTCAATCCTCATCTGATGAAGCACAGAAATCCTGA

mRNA sequence

ATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCTGCCATCTCCGACTCGGCTGAGCCCCAGACTTATGACTCTGACTTCGTCATAATCCTAGCTGCCCTCCTCTGTGCCTTGATATGCGTTCTCGGTCTAGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCACCTTGCCGGCAATGTCAGCGGCGGCGCTTCCACTCGTCCTCCTCCTCCTCCTCCTCCTGCGTCCAATAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACAACTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCAATCGGTGATGAAATCCGGGTGCTGCCACAGTGCGGCCATGGGTTTCACGTGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCATGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAGAAGTGCGGTGGTTTTCCGGCAAGCTCGAGTTCTAACGGTGGGACGGAATCCAGAGTGAAAGAGGGAGGAGATGTATGTTTTCCTGCTCATGTAATGGCATCCAATTGGACTCTGCGGTTACATTCTTATTCTTTCCAGCCATACGTATGGGTTGGAAAGCCTCTTGTTCTGTCCGTCTTATCCGAACTCGGAATTGGTTATAAATGCGCTGGCATTAGATATGGTCATTTCAACATTAACCGGAATCGGCATCGAATTGGTCGCAGATTTCTAATAAATTCGGCTGAGGGGTCCGGGAGCACTGATTCCGGGCGAAATGTCGAAGATGATGAAATTATGGTCAAGAGTGGGACTGGTGGTGTAGCTTCCAGAGATTACAAGGGGAAATTGCAGGAGATGATTTATTCGTCGCCTCCAGGCGTTTTCCTTATGAACAGATGTACTGGAAATGGTCTTGCAATTGGGTTTTGCATTGCGACGGCTTGTTTAGCAATAGTTGCAAGAGTGTATTTGATGGGAAAATCCAGGAGCAGTCATTCCGGATCAGTGGCTGATCTAGTCAGGCGTGGTCAGCTAAGATCTGACAGAAGAGGCATTTCCAAACCTTTAAAATACAATGATCCCTTTAACAATCCATTGGTGAAGGTTGACCAAAGCAATTCTTCCGTAGAAATGTGTGGAAAGGTTTATCGGTTGGCCCCGGTTACTCTTACGAAGGAAGAACAAAGTATTCATCAGAAACGGAGGTCTCGGGCATATCAGTGGAAGAGACCAACCATGTTTCTTAAGGAAGGAGATTCAATTCCTCCTGATGTTAACCCTGATACAATCAGTTGGATCCCTGCAAACCATCCGTTTGCAACAACATCTAGTGATATTGATGAAGACTTGGCCCAGAACAATGTGCACCAAAAGCATGGTGTTCCCTTCCGTATTCAGGCCGAGCATGACGCTTTGCAGAGAAAGCTTGAAGCGCTCCAGGGTGTGAGTAACTCTGATACTCTGTACTCGATTCTGTCTTGTCTTCATGCTCTTCCTTCAGTTGATAGATTCATATATAACATTTGCTGCGTGGTAATGGAACAGAAACTGAATAATTTATTTATAGATCCTAGAGATGGGAAGGATTTTGAGAGACCTGTTGAGTCCAAACCCAACTCTGATGAACAAGTAGAACAAAGCTTTACAGACCACCAAGCTGGAGAGTCGAAGCCTCCAAACTCGGGACATCTCCCAAGCTCTTTCGGGGTTCAATCCTCATCTGATGAAGCACAGAAATCCTGA

Coding sequence (CDS)

ATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCTGCCATCTCCGACTCGGCTGAGCCCCAGACTTATGACTCTGACTTCGTCATAATCCTAGCTGCCCTCCTCTGTGCCTTGATATGCGTTCTCGGTCTAGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCACCTTGCCGGCAATGTCAGCGGCGGCGCTTCCACTCGTCCTCCTCCTCCTCCTCCTCCTGCGTCCAATAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACAACTTCACCGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCAATCGGTGATGAAATCCGGGTGCTGCCACAGTGCGGCCATGGGTTTCACGTGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCATGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAGAAGTGCGGTGGTTTTCCGGCAAGCTCGAGTTCTAACGGTGGGACGGAATCCAGAGTGAAAGAGGGAGGAGATGTATGTTTTCCTGCTCATGTAATGGCATCCAATTGGACTCTGCGGTTACATTCTTATTCTTTCCAGCCATACGTATGGGTTGGAAAGCCTCTTGTTCTGTCCGTCTTATCCGAACTCGGAATTGGTTATAAATGCGCTGGCATTAGATATGGTCATTTCAACATTAACCGGAATCGGCATCGAATTGGTCGCAGATTTCTAATAAATTCGGCTGAGGGGTCCGGGAGCACTGATTCCGGGCGAAATGTCGAAGATGATGAAATTATGGTCAAGAGTGGGACTGGTGGTGTAGCTTCCAGAGATTACAAGGGGAAATTGCAGGAGATGATTTATTCGTCGCCTCCAGGCGTTTTCCTTATGAACAGATGTACTGGAAATGGTCTTGCAATTGGGTTTTGCATTGCGACGGCTTGTTTAGCAATAGTTGCAAGAGTGTATTTGATGGGAAAATCCAGGAGCAGTCATTCCGGATCAGTGGCTGATCTAGTCAGGCGTGGTCAGCTAAGATCTGACAGAAGAGGCATTTCCAAACCTTTAAAATACAATGATCCCTTTAACAATCCATTGGTGAAGGTTGACCAAAGCAATTCTTCCGTAGAAATGTGTGGAAAGGTTTATCGGTTGGCCCCGGTTACTCTTACGAAGGAAGAACAAAGTATTCATCAGAAACGGAGGTCTCGGGCATATCAGTGGAAGAGACCAACCATGTTTCTTAAGGAAGGAGATTCAATTCCTCCTGATGTTAACCCTGATACAATCAGTTGGATCCCTGCAAACCATCCGTTTGCAACAACATCTAGTGATATTGATGAAGACTTGGCCCAGAACAATGTGCACCAAAAGCATGGTGTTCCCTTCCGTATTCAGGCCGAGCATGACGCTTTGCAGAGAAAGCTTGAAGCGCTCCAGGGTGTGAGTAACTCTGATACTCTGTACTCGATTCTGTCTTGTCTTCATGCTCTTCCTTCAGTTGATAGATTCATATATAACATTTGCTGCGTGGTAATGGAACAGAAACTGAATAATTTATTTATAGATCCTAGAGATGGGAAGGATTTTGAGAGACCTGTTGAGTCCAAACCCAACTCTGATGAACAAGTAGAACAAAGCTTTACAGACCACCAAGCTGGAGAGTCGAAGCCTCCAAACTCGGGACATCTCCCAAGCTCTTTCGGGGTTCAATCCTCATCTGATGAAGCACAGAAATCCTGA

Protein sequence

MRPFRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSGGASTRPPPPPPPASNKGLKKKILRSLPKYNFTAEFSAQFSDCAICLAEFAIGDEIRVLPQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEGGDVCFPAHVMASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFLINSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNGLAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNNPLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPDVNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSNSDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQVEQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQKS

Homology

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BLAST of CmaCh09G000330.1 vs. Swiss-Prot
Match: MCD1_ARATH (Protein MULTIPLE CHLOROPLAST DIVISION SITE 1 OS=Arabidopsis thaliana GN=MCD1 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.4e-81
Identity = 162/302 (53.64%), Postives = 207/302 (68.54%), Query Frame = 1


Query: 264 EDDEIMVKSGTGGVASRDYK---GKLQEMIYSSPPGVFLMNRCTGNGLAIGFCIATACLA 323
           +D+ ++V + T      D +    + + M+ + PP VFLM +C+ N + IG CI    L 
Sbjct: 72  DDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVNSIWIGVCITATVLV 131

Query: 324 IVARVYLMGKSRSSH-SGSVADLVRRGQLRS-DRRGISKPLKYNDPFNNPLVKVDQSNSS 383
              R Y++ KSR +  +GSVADLVRRGQLRS DRRGISK L Y DPFNNP VK+D+ +S+
Sbjct: 132 AAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDPFNNPFVKLDKGSST 191

Query: 384 VEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPDVNPDTISWIPA 443
           VEMCGKVYRLAPVTLT++EQ+IHQKRRSRAYQWKRPT+FLKEGDSIPPDV+PDT+ WIPA
Sbjct: 192 VEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIPPDVDPDTVRWIPA 251

Query: 444 NHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSNSDTLYSILSCL 503
           NHPFATT SDID+DLAQNNV+QK GVPFRI+AEH+A+Q+KLEALQ               
Sbjct: 252 NHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN-------------- 311

Query: 504 HALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVE-SKPNSDEQVEQSFTDHQAG 560
                             E+KLNNL ID ++ +DF+RP + S     E ++++  ++  G
Sbjct: 312 ------------------EEKLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTG 341

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BLAST of CmaCh09G000330.1 vs. Swiss-Prot
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.4e-53
Identity = 111/185 (60.00%), Postives = 136/185 (73.51%), Query Frame = 1


Query: 4   FRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLA-GNVS 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA GN +
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GGASTRPPPPPPPASNKGLKKKILRSLPKYNFTAEF--SAQFSDCAICLAEFAIGDEIR 123
             G+ T+ P PP  A+NKGLKKK+L+SLPK  F+ E   S +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTES----RV 181
           VLPQCGHGFHV+CID W  SHSSCPSCRQILVV++C KCGG P SSSS   +E     R+
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

[Close]

BLAST of CmaCh09G000330.1 vs. Swiss-Prot
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 2.4e-51
Identity = 103/179 (57.54%), Postives = 133/179 (74.30%), Query Frame = 1


Query: 4   FRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSG 63
           FR L   NS++ ++++ P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A   S 
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIA---SR 65

Query: 64  GASTRPPPPPPPASNKGLKKKILRSLPKYNFTAEF--SAQFSDCAICLAEFAIGDEIRVL 123
             S +  PPP  A+NKGLKKK+LRSLPK  ++ +   + +  +CAICL EFA GDE+RVL
Sbjct: 66  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 125

Query: 124 PQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEGGD 181
           PQCGHGFHVSCID W  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D
Sbjct: 126 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQRED 179

[Close]

BLAST of CmaCh09G000330.1 vs. Swiss-Prot
Match: ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-35
Identity = 77/151 (50.99%), Postives = 95/151 (62.91%), Query Frame = 1


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSGGASTRPPPPPPPASNKGLKKK 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G         PPP      NKGLKKK
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP------NKGLKKK 82

Query: 85  ILRSLPKYNFTAEFSA----------------QFSDCAICLAEFAIGDEIRVLPQCGHGF 144
            L++LPK  +TA  S                   ++CAIC+ EF+ G+EIR+LP C H F
Sbjct: 83  ALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAF 142

Query: 145 HVSCIDMWFRSHSSCPSCRQILVVSQCQKCG 160
           HV+CID W  S SSCPSCR+ILV  +C +CG
Sbjct: 143 HVACIDKWLTSRSSCPSCRRILVPVKCDRCG 167

[Close]

BLAST of CmaCh09G000330.1 vs. Swiss-Prot
Match: ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.3e-35
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 18  SAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSGGASTRPPPPPPPAS 77
           S E    +SD V+IL+ALLCALICV GL AV RCAWLR      +GG S        P+ 
Sbjct: 18  SEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFT---AGGDS--------PSP 77

Query: 78  NKGLKKKILRSLPKYNFTAEFSAQ--------FSDCAICLAEFAIGDEIRVLPQCGHGFH 137
           NKGLKKK L+SLP+  FTA  S           ++CAICL +FA G+EIRVLP CGH FH
Sbjct: 78  NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFH 137

Query: 138 VSCIDMWFRSHSSCPSCRQILVVSQCQKCG 160
           V CID W  S SSCPSCR+IL   +C +CG
Sbjct: 138 VECIDKWLVSRSSCPSCRRILTPVRCDRCG 156

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BLAST of CmaCh09G000330.1 vs. TrEMBL
Match: A0A0A0L1E5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664360 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 9.7e-161
Identity = 298/396 (75.25%), Postives = 320/396 (80.81%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MA NWTL+LHS SFQPYVWV KP  LS +S+LGIG K  GIRYGH N N +R RIG  F+
Sbjct: 1   MAPNWTLQLHSLSFQPYVWVRKPPALSAISQLGIGSKWDGIRYGHLNCNSDRSRIGGNFV 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + S EGS STDSG NVE DEI++KSGTG VAS DY GK+QEMI SSPPGVFLMN+CT NG
Sbjct: 61  VKSGEGSASTDSGGNVEGDEIVLKSGTGSVASEDYIGKMQEMIISSPPGVFLMNKCTRNG 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
           LAIGFC+ TACLAIVARVYLM KSR+SHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMRKSRNSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKVD+SNSSVEMCGKVYRLAPVTLTKEEQ+IHQKRRSRAYQWKRPTMFLKEGDSIPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDTI WIPANHPFATT+SDIDEDLAQNNV+QKHGVPFRIQAEH+ALQRKLEALQ    
Sbjct: 241 VDPDTIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQS--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        +QKLNNLFIDP   K+FERP +SK  SDEQV
Sbjct: 301 -----------------------------DQKLNNLFIDPGSVKEFERPFKSKSKSDEQV 358

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQKS 584
           EQS +DHQ GESKPPN      SFG QSSSDEAQKS
Sbjct: 361 EQSSSDHQTGESKPPN------SFGGQSSSDEAQKS 358

[Close]

BLAST of CmaCh09G000330.1 vs. TrEMBL
Match: A0A061FEL2_THECC (Multiple chloroplast division site 1, putative OS=Theobroma cacao GN=TCM_034435 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-101
Identity = 209/395 (52.91%), Postives = 252/395 (63.80%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MAS W+L  HS  FQP +   K  V S  +   + ++    +     +  NR     RFL
Sbjct: 1   MASVWSLHFHSLPFQPSIRGWKDRVSSDGTPFLL-HRSLSQQLSWIQLTTNR-----RFL 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + +   S S+D  +  +++       T  V S+D     QE I S PP VFLM +C GN 
Sbjct: 61  LRAINDSVSSDEDQRAQNEVADTAKQTLVVDSKDPLSTFQESIASFPPVVFLMKKCPGNN 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
            AIG C A A L +  R Y+  KSR SH GSVADLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 FAIGLCTAIAILVVAVRAYMARKSRQSHPGSVADLVRRGQLRSDRRGISRPLKYEDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           P VKV +SNS+VEMCGK+YRLAPVTLT E+Q+IHQKRRSRAY WKRPT+FLKEGDSIPPD
Sbjct: 181 PFVKVGKSNSTVEMCGKLYRLAPVTLTNEQQAIHQKRRSRAYPWKRPTIFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDT+ WIPANHPFATT++DIDEDLAQNNV+QKHGVPFRIQAEH+ALQRKLEALQ    
Sbjct: 241 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQN--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        E+KLNNLFID R+ KDF+RP +     DE  
Sbjct: 301 -----------------------------EEKLNNLFIDSRNAKDFQRPFKLNARPDELA 357

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQK 583
           E+  T++ A ++KPP      +S     SS+E QK
Sbjct: 361 EEGPTNNHAVDNKPPEPERASNSIESNLSSEETQK 357

[Close]

BLAST of CmaCh09G000330.1 vs. TrEMBL
Match: V4TAX1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001686mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.3e-96
Identity = 200/395 (50.63%), Postives = 260/395 (65.82%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MAS WTL+ HS  F P+       V S +++L   +  +  R     ++ NR    R+F 
Sbjct: 1   MASIWTLQFHSLYF-PH------RVSSTVAKLRTEFTLSQGR-----LSLNRWSTNRKFQ 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + +   S S++  +N+E  ++ V + T    ++D   K QE + S PP  F+M R T + 
Sbjct: 61  LKAVRDSASSNEDQNLESGKVAVAADT---KTKDPVAKFQETLISLPPVAFVMKRHTRSS 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
            AIG  ++TA L IV R +++ +SR +  GSV DLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 FAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKV +SNS++EMCGKVYRLAP+TLTKE+Q+IHQKRRSRAYQWKRPT+FLKEGD IPPD
Sbjct: 181 PLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDT+ WIPANHPFATT++DIDEDLAQNNV+QKHGVPFRI+AEH+ALQ+KLEALQ    
Sbjct: 241 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKHGVPFRIRAEHEALQKKLEALQN--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        EQKLN L ID  + KDFER  +  P S+E +
Sbjct: 301 -----------------------------EQKLNKLVIDSSNAKDFERAFKLNPKSEEPL 348

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQK 583
           +Q+   +Q+G+ +PP     P+ +   SSS+E QK
Sbjct: 361 DQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQK 348

[Close]

BLAST of CmaCh09G000330.1 vs. TrEMBL
Match: A0A067GZS9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018859mg PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-95
Identity = 199/395 (50.38%), Postives = 259/395 (65.57%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MAS WTL+ HS  F P+       V S +++L   +  +  R     ++ NR    R+F 
Sbjct: 1   MASIWTLQFHSLYF-PH------RVSSTVAKLRTEFTLSQGR-----LSLNRWSTNRKFQ 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + +   S S++  +N+E  ++ V + T    ++D   K QE + S PP  F+M R T + 
Sbjct: 61  LKAVRDSASSNEDQNLESGKVAVAADT---KTKDPVAKFQETLISLPPVAFVMKRHTRSS 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
            AIG  ++TA L IV R +++ +SR +  GSV DLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 FAIGLSLSTAFLVIVVRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKV +SNS++EMCGKVYRLAP+TLTKE+Q+IHQKRRSRAYQWKRPT+FLKEGD IPPD
Sbjct: 181 PLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDT+ WIPANHPFATT++DIDEDLAQNNV+QK GVPFRI+AEH+ALQ+KLEALQ    
Sbjct: 241 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQN--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        EQKLN L ID  + KDFER  +  P S+E +
Sbjct: 301 -----------------------------EQKLNKLVIDSSNAKDFERAFKLNPKSEEPL 348

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQK 583
           +Q+   +Q+G+ +PP     P+ +   SSS+E QK
Sbjct: 361 DQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQK 348

[Close]

BLAST of CmaCh09G000330.1 vs. TrEMBL
Match: A0A067KKY3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08048 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.0e-94
Identity = 205/394 (52.03%), Postives = 251/394 (63.71%), Query Frame = 1


Query: 193 TLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFLINSAE 252
           TL+ HS+S QP +WV K  +     E+   +  +     H  +  N       F + +  
Sbjct: 7   TLQFHSFSIQPSIWVSKHQISPNFVEIRREFVLS-----HGQLRWNPPVTNPLFQLRAIN 66

Query: 253 GSGSTDSGRNVEDDEIMVKSGTGGVASRDYK---GKLQEMIYSSPPGVFLMN-RCTGNGL 312
            S S +  +  +D   ++K+G   +A  D+K    KLQ  I + PP VF+   +  G+  
Sbjct: 67  DSVSAEDEQRPQDG--VIKAGPKDIAL-DFKHHISKLQGTISTFPPIVFVTRTQARGSNF 126

Query: 313 AIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNNP 372
            I  C+ TA L I  RVY + KSR +  GSVADLVRRGQLRSDRRGIS+PLKY DPFNNP
Sbjct: 127 IIWLCLVTAFLVIAVRVYAVRKSRYNRPGSVADLVRRGQLRSDRRGISRPLKYEDPFNNP 186

Query: 373 LVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPDV 432
           LVKV +SNS+VEMCGKVYRLAPVTLTKEEQ+IHQKRRSRAYQWKRPT+FLKEGDS+PPDV
Sbjct: 187 LVKVGKSNSTVEMCGKVYRLAPVTLTKEEQAIHQKRRSRAYQWKRPTIFLKEGDSVPPDV 246

Query: 433 NPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSNS 492
           +PDTI WIPANHPFATT+SDIDEDLAQNNV+ K GVPFRIQAEH+ALQRKLEALQ     
Sbjct: 247 DPDTIRWIPANHPFATTASDIDEDLAQNNVYLKRGVPFRIQAEHEALQRKLEALQN---- 306

Query: 493 DTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQVE 552
                                       EQKLN L ID  + KDFERP +    S+E +E
Sbjct: 307 ----------------------------EQKLNKLVIDTSNAKDFERPFKLNQKSNELIE 360

Query: 553 QSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQK 583
           QS  ++QAG++KP  S   P+      S++E QK
Sbjct: 367 QSPVNNQAGDTKPLKSDVAPNPLNSTLSAEEMQK 360

[Close]

BLAST of CmaCh09G000330.1 vs. TAIR10
Match: AT1G20830.1 (AT1G20830.1 multiple chloroplast division site 1)

HSP 1 Score: 302.8 bits (774), Expect = 4.7e-82
Identity = 162/302 (53.64%), Postives = 207/302 (68.54%), Query Frame = 1


Query: 264 EDDEIMVKSGTGGVASRDYK---GKLQEMIYSSPPGVFLMNRCTGNGLAIGFCIATACLA 323
           +D+ ++V + T      D +    + + M+ + PP VFLM +C+ N + IG CI    L 
Sbjct: 72  DDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVNSIWIGVCITATVLV 131

Query: 324 IVARVYLMGKSRSSH-SGSVADLVRRGQLRS-DRRGISKPLKYNDPFNNPLVKVDQSNSS 383
              R Y++ KSR +  +GSVADLVRRGQLRS DRRGISK L Y DPFNNP VK+D+ +S+
Sbjct: 132 AAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDPFNNPFVKLDKGSST 191

Query: 384 VEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPDVNPDTISWIPA 443
           VEMCGKVYRLAPVTLT++EQ+IHQKRRSRAYQWKRPT+FLKEGDSIPPDV+PDT+ WIPA
Sbjct: 192 VEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIPPDVDPDTVRWIPA 251

Query: 444 NHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSNSDTLYSILSCL 503
           NHPFATT SDID+DLAQNNV+QK GVPFRI+AEH+A+Q+KLEALQ               
Sbjct: 252 NHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQN-------------- 311

Query: 504 HALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVE-SKPNSDEQVEQSFTDHQAG 560
                             E+KLNNL ID ++ +DF+RP + S     E ++++  ++  G
Sbjct: 312 ------------------EEKLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTG 341

[Close]

BLAST of CmaCh09G000330.1 vs. TAIR10
Match: AT1G20823.1 (AT1G20823.1 RING/U-box superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-54
Identity = 111/185 (60.00%), Postives = 136/185 (73.51%), Query Frame = 1


Query: 4   FRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLA-GNVS 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA GN +
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GGASTRPPPPPPPASNKGLKKKILRSLPKYNFTAEF--SAQFSDCAICLAEFAIGDEIR 123
             G+ T+ P PP  A+NKGLKKK+L+SLPK  F+ E   S +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTES----RV 181
           VLPQCGHGFHV+CID W  SHSSCPSCRQILVV++C KCGG P SSSS   +E     R+
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

[Close]

BLAST of CmaCh09G000330.1 vs. TAIR10
Match: AT1G76410.1 (AT1G76410.1 RING/U-box superfamily protein)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-52
Identity = 103/179 (57.54%), Postives = 133/179 (74.30%), Query Frame = 1


Query: 4   FRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSG 63
           FR L   NS++ ++++ P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A   S 
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIA---SR 65

Query: 64  GASTRPPPPPPPASNKGLKKKILRSLPKYNFTAEF--SAQFSDCAICLAEFAIGDEIRVL 123
             S +  PPP  A+NKGLKKK+LRSLPK  ++ +   + +  +CAICL EFA GDE+RVL
Sbjct: 66  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 125

Query: 124 PQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEGGD 181
           PQCGHGFHVSCID W  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D
Sbjct: 126 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQRED 179

[Close]

BLAST of CmaCh09G000330.1 vs. TAIR10
Match: AT4G35480.1 (AT4G35480.1 RING-H2 finger A3B)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-36
Identity = 77/151 (50.99%), Postives = 95/151 (62.91%), Query Frame = 1


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSGGASTRPPPPPPPASNKGLKKK 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G         PPP      NKGLKKK
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP------NKGLKKK 82

Query: 85  ILRSLPKYNFTAEFSA----------------QFSDCAICLAEFAIGDEIRVLPQCGHGF 144
            L++LPK  +TA  S                   ++CAIC+ EF+ G+EIR+LP C H F
Sbjct: 83  ALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAF 142

Query: 145 HVSCIDMWFRSHSSCPSCRQILVVSQCQKCG 160
           HV+CID W  S SSCPSCR+ILV  +C +CG
Sbjct: 143 HVACIDKWLTSRSSCPSCRRILVPVKCDRCG 167

[Close]

BLAST of CmaCh09G000330.1 vs. TAIR10
Match: AT2G17450.1 (AT2G17450.1 RING-H2 finger A3A)

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-36
Identity = 82/150 (54.67%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 18  SAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVSGGASTRPPPPPPPAS 77
           S E    +SD V+IL+ALLCALICV GL AV RCAWLR      +GG S        P+ 
Sbjct: 18  SEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFT---AGGDS--------PSP 77

Query: 78  NKGLKKKILRSLPKYNFTAEFSAQ--------FSDCAICLAEFAIGDEIRVLPQCGHGFH 137
           NKGLKKK L+SLP+  FTA  S           ++CAICL +FA G+EIRVLP CGH FH
Sbjct: 78  NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFH 137

Query: 138 VSCIDMWFRSHSSCPSCRQILVVSQCQKCG 160
           V CID W  S SSCPSCR+IL   +C +CG
Sbjct: 138 VECIDKWLVSRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of CmaCh09G000330.1 vs. NCBI nr
Match: gi|659105080|ref|XP_008453007.1| (PREDICTED: uncharacterized protein LOC103493840 isoform X1 [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 7.4e-162
Identity = 300/394 (76.14%), Postives = 324/394 (82.23%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MA NWTL+LHS SFQPYVWV KP  LSV+S+LG+G K  GIRYGH N N NR RIG +F+
Sbjct: 1   MAFNWTLQLHSLSFQPYVWVRKPPALSVISQLGLGSKWDGIRYGHLNCNSNRSRIGGKFV 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           I SAEGSGSTDSGRNVE +EI+VKSGTGGVAS+DY GK+QE+I  SPPGVFLMN+CT NG
Sbjct: 61  IKSAEGSGSTDSGRNVEGEEIVVKSGTGGVASKDYIGKMQELIALSPPGVFLMNKCTRNG 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
           LAIGFC+ TACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKVD+SNSSVEMCGKVYRLAPVTLTKEEQ+IHQKRRSRAYQWKRPTMFLKEGDSIPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+P+TI WIPANHPFATT+SDIDEDLAQNNV+QKHGVPFRIQAEH+ALQ+KLEALQ    
Sbjct: 241 VDPETIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQKKLEALQS--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        EQKLNNLFIDP   K+FERP +SK  SDEQV
Sbjct: 301 -----------------------------EQKLNNLFIDPGSVKEFERPFKSKSKSDEQV 356

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQ 582
           EQS +D Q GESKPPN      SFG QSSSDEAQ
Sbjct: 361 EQSSSDLQTGESKPPN------SFGGQSSSDEAQ 356

[Close]

BLAST of CmaCh09G000330.1 vs. NCBI nr
Match: gi|659105082|ref|XP_008453008.1| (PREDICTED: uncharacterized protein LOC103493840 isoform X2 [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 7.4e-162
Identity = 300/394 (76.14%), Postives = 324/394 (82.23%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MA NWTL+LHS SFQPYVWV KP  LSV+S+LG+G K  GIRYGH N N NR RIG +F+
Sbjct: 1   MAFNWTLQLHSLSFQPYVWVRKPPALSVISQLGLGSKWDGIRYGHLNCNSNRSRIGGKFV 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           I SAEGSGSTDSGRNVE +EI+VKSGTGGVAS+DY GK+QE+I  SPPGVFLMN+CT NG
Sbjct: 61  IKSAEGSGSTDSGRNVEGEEIVVKSGTGGVASKDYIGKMQELIALSPPGVFLMNKCTRNG 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
           LAIGFC+ TACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKVD+SNSSVEMCGKVYRLAPVTLTKEEQ+IHQKRRSRAYQWKRPTMFLKEGDSIPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+P+TI WIPANHPFATT+SDIDEDLAQNNV+QKHGVPFRIQAEH+ALQ+KLEALQ    
Sbjct: 241 VDPETIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQKKLEALQS--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        EQKLNNLFIDP   K+FERP +SK  SDEQV
Sbjct: 301 -----------------------------EQKLNNLFIDPGSVKEFERPFKSKSKSDEQV 356

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQ 582
           EQS +D Q GESKPPN      SFG QSSSDEAQ
Sbjct: 361 EQSSSDLQTGESKPPN------SFGGQSSSDEAQ 356

[Close]

BLAST of CmaCh09G000330.1 vs. NCBI nr
Match: gi|449455623|ref|XP_004145552.1| (PREDICTED: uncharacterized protein LOC101205591 [Cucumis sativus])

HSP 1 Score: 575.1 bits (1481), Expect = 1.4e-160
Identity = 298/396 (75.25%), Postives = 320/396 (80.81%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MA NWTL+LHS SFQPYVWV KP  LS +S+LGIG K  GIRYGH N N +R RIG  F+
Sbjct: 1   MAPNWTLQLHSLSFQPYVWVRKPPALSAISQLGIGSKWDGIRYGHLNCNSDRSRIGGNFV 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + S EGS STDSG NVE DEI++KSGTG VAS DY GK+QEMI SSPPGVFLMN+CT NG
Sbjct: 61  VKSGEGSASTDSGGNVEGDEIVLKSGTGSVASEDYIGKMQEMIISSPPGVFLMNKCTRNG 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
           LAIGFC+ TACLAIVARVYLM KSR+SHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN
Sbjct: 121 LAIGFCVVTACLAIVARVYLMRKSRNSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           PLVKVD+SNSSVEMCGKVYRLAPVTLTKEEQ+IHQKRRSRAYQWKRPTMFLKEGDSIPPD
Sbjct: 181 PLVKVDKSNSSVEMCGKVYRLAPVTLTKEEQNIHQKRRSRAYQWKRPTMFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDTI WIPANHPFATT+SDIDEDLAQNNV+QKHGVPFRIQAEH+ALQRKLEALQ    
Sbjct: 241 VDPDTIRWIPANHPFATTASDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQS--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        +QKLNNLFIDP   K+FERP +SK  SDEQV
Sbjct: 301 -----------------------------DQKLNNLFIDPGSVKEFERPFKSKSKSDEQV 358

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQKS 584
           EQS +DHQ GESKPPN      SFG QSSSDEAQKS
Sbjct: 361 EQSSSDHQTGESKPPN------SFGGQSSSDEAQKS 358

[Close]

BLAST of CmaCh09G000330.1 vs. NCBI nr
Match: gi|590595658|ref|XP_007018118.1| (Multiple chloroplast division site 1, putative [Theobroma cacao])

HSP 1 Score: 377.5 bits (968), Expect = 4.3e-101
Identity = 209/395 (52.91%), Postives = 252/395 (63.80%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           MAS W+L  HS  FQP +   K  V S  +   + ++    +     +  NR     RFL
Sbjct: 1   MASVWSLHFHSLPFQPSIRGWKDRVSSDGTPFLL-HRSLSQQLSWIQLTTNR-----RFL 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + +   S S+D  +  +++       T  V S+D     QE I S PP VFLM +C GN 
Sbjct: 61  LRAINDSVSSDEDQRAQNEVADTAKQTLVVDSKDPLSTFQESIASFPPVVFLMKKCPGNN 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHSGSVADLVRRGQLRSDRRGISKPLKYNDPFNN 367
            AIG C A A L +  R Y+  KSR SH GSVADLVRRGQLRSDRRGIS+PLKY DPFNN
Sbjct: 121 FAIGLCTAIAILVVAVRAYMARKSRQSHPGSVADLVRRGQLRSDRRGISRPLKYEDPFNN 180

Query: 368 PLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPPD 427
           P VKV +SNS+VEMCGK+YRLAPVTLT E+Q+IHQKRRSRAY WKRPT+FLKEGDSIPPD
Sbjct: 181 PFVKVGKSNSTVEMCGKLYRLAPVTLTNEQQAIHQKRRSRAYPWKRPTIFLKEGDSIPPD 240

Query: 428 VNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVSN 487
           V+PDT+ WIPANHPFATT++DIDEDLAQNNV+QKHGVPFRIQAEH+ALQRKLEALQ    
Sbjct: 241 VDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKHGVPFRIQAEHEALQRKLEALQN--- 300

Query: 488 SDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQV 547
                                        E+KLNNLFID R+ KDF+RP +     DE  
Sbjct: 301 -----------------------------EEKLNNLFIDSRNAKDFQRPFKLNARPDELA 357

Query: 548 EQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQK 583
           E+  T++ A ++KPP      +S     SS+E QK
Sbjct: 361 EEGPTNNHAVDNKPPEPERASNSIESNLSSEETQK 357

[Close]

BLAST of CmaCh09G000330.1 vs. NCBI nr
Match: gi|1000985833|ref|XP_015572618.1| (PREDICTED: uncharacterized protein LOC8273651 [Ricinus communis])

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 214/395 (54.18%), Postives = 259/395 (65.57%), Query Frame = 1


Query: 188 MASNWTLRLHSYSFQPYVWVGKPLVLSVLSELGIGYKCAGIRYGHFNINRNRHRIGRRFL 247
           M S WTL+ HS S QP +W+ KP +     E+   +  +     H+ I  NR        
Sbjct: 1   MTSIWTLQFHSLSTQPLMWISKPRLSPKFMEIRREFVLS-----HYQIKLNRSFTNP--- 60

Query: 248 INSAEGSGSTDSGRNVEDDEIMVKSGTGGVASRDYKGKLQEMIYSSPPGVFLMNRCTGNG 307
           + +++GS +       ED++      T  V+S D   K Q +I + PP VF+  R +G+ 
Sbjct: 61  LRASKGSVNP-----TEDEQ------TPTVSSLD---KFQAIISTLPPVVFVRRRQSGSN 120

Query: 308 LAIGFCIATACLAIVARVYLMGKSRSSHS-GSVADLVRRGQLRSDRRGISKPLKYNDPFN 367
           + I  C+ATA L I  RVY++ K+R     GSVADLVRRGQLRSDRRGIS PLKY+DPFN
Sbjct: 121 IIIWLCVATAFLVIALRVYVVRKTRYRRPPGSVADLVRRGQLRSDRRGISMPLKYDDPFN 180

Query: 368 NPLVKVDQSNSSVEMCGKVYRLAPVTLTKEEQSIHQKRRSRAYQWKRPTMFLKEGDSIPP 427
           NPLVKV +SNS+VEMCGKVYRLAPVTLTKE+Q+IHQKRRSRAYQWKRPT+FLKEGDSIPP
Sbjct: 181 NPLVKVGKSNSTVEMCGKVYRLAPVTLTKEQQAIHQKRRSRAYQWKRPTIFLKEGDSIPP 240

Query: 428 DVNPDTISWIPANHPFATTSSDIDEDLAQNNVHQKHGVPFRIQAEHDALQRKLEALQGVS 487
           DV+PDT+ WIPANHPFATT+SDIDEDLAQ NV+QKHGVPFRIQAEH+ALQRKLEALQ   
Sbjct: 241 DVDPDTVRWIPANHPFATTASDIDEDLAQTNVYQKHGVPFRIQAEHEALQRKLEALQ--- 300

Query: 488 NSDTLYSILSCLHALPSVDRFIYNICCVVMEQKLNNLFIDPRDGKDFERPVESKPNSDEQ 547
                                         +QKLN L ID  + KDFERP +S P S+E 
Sbjct: 301 -----------------------------QDQKLNKLVIDTSNAKDFERPFKSNPKSNEL 341

Query: 548 VEQSFTDHQAGESKPPNSGHLPSSFGVQSSSDEAQ 582
           VEQS  + QAGE KP  S  +P+SF    SS+E Q
Sbjct: 361 VEQSPFNDQAGEPKPSKSNSIPNSFNSSLSSEELQ 341

The following BLAST results are available for this feature:

BLAST of CmaCh09G000330.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MCD1_ARATH	8.4e-81	53.64	Protein MULTIPLE CHLOROPLAST DIVISION SITE 1 OS=Arabidopsis thaliana GN=MCD1 PE=...	[more]
ATL80_ARATH	7.4e-53	60.00	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1	[more]
ATL8_ARATH	2.4e-51	57.54	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2	[more]
ATL45_ARATH	3.1e-35	50.99	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2...	[more]
ATL44_ARATH	5.3e-35	54.67	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2...	[more]

BLAST of CmaCh09G000330.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1E5_CUCSA	9.7e-161	75.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664360 PE=4 SV=1	[more]
A0A061FEL2_THECC	3.0e-101	52.91	Multiple chloroplast division site 1, putative OS=Theobroma cacao GN=TCM_034435 ...	[more]
V4TAX1_9ROSI	1.3e-96	50.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001686mg PE=4 SV=1	[more]
A0A067GZS9_CITSI	1.1e-95	50.38	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018859mg PE=4 SV=1	[more]
A0A067KKY3_JATCU	6.0e-94	52.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08048 PE=4 SV=1	[more]

BLAST of CmaCh09G000330.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20830.1	4.7e-82	53.64	multiple chloroplast division site 1	[more]
AT1G20823.1	4.2e-54	60.00	RING/U-box superfamily protein	[more]
AT1G76410.1	1.3e-52	57.54	RING/U-box superfamily protein	[more]
AT4G35480.1	1.8e-36	50.99	RING-H2 finger A3B	[more]
AT2G17450.1	3.0e-36	54.67	RING-H2 finger A3A	[more]

BLAST of CmaCh09G000330.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105080\|ref\|XP_008453007.1\|	7.4e-162	76.14	PREDICTED: uncharacterized protein LOC103493840 isoform X1 [Cucumis melo]	[more]
gi\|659105082\|ref\|XP_008453008.1\|	7.4e-162	76.14	PREDICTED: uncharacterized protein LOC103493840 isoform X2 [Cucumis melo]	[more]
gi\|449455623\|ref\|XP_004145552.1\|	1.4e-160	75.25	PREDICTED: uncharacterized protein LOC101205591 [Cucumis sativus]	[more]
gi\|590595658\|ref\|XP_007018118.1\|	4.3e-101	52.91	Multiple chloroplast division site 1, putative [Theobroma cacao]	[more]
gi\|1000985833\|ref\|XP_015572618.1\|	2.3e-99	54.18	PREDICTED: uncharacterized protein LOC8273651 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh09G000330	CmaCh09G000330	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000330.1	CmaCh09G000330.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000330.1.CDS.6	CmaCh09G000330.1.CDS.6	CDS
CmaCh09G000330.1.CDS.5	CmaCh09G000330.1.CDS.5	CDS
CmaCh09G000330.1.CDS.4	CmaCh09G000330.1.CDS.4	CDS
CmaCh09G000330.1.CDS.3	CmaCh09G000330.1.CDS.3	CDS
CmaCh09G000330.1.CDS.2	CmaCh09G000330.1.CDS.2	CDS
CmaCh09G000330.1.CDS.1	CmaCh09G000330.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh09G000330.1.exon.6	CmaCh09G000330.1.exon.6	exon
CmaCh09G000330.1.exon.5	CmaCh09G000330.1.exon.5	exon
CmaCh09G000330.1.exon.4	CmaCh09G000330.1.exon.4	exon
CmaCh09G000330.1.exon.3	CmaCh09G000330.1.exon.3	exon
CmaCh09G000330.1.exon.2	CmaCh09G000330.1.exon.2	exon
CmaCh09G000330.1.exon.1	CmaCh09G000330.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 score: 1.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 105..147 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 103..148 score: 9.7
None	No IPR available	PANTHER	PTHR36317	FAMILY NOT NAMED	coord: 517..583 score: 7.2E-149coord: 184..484 score: 7.2E
None	No IPR available	PANTHER	PTHR36317:SF1	MULTIPLE CHLOROPLAST DIVISION SITE 1	coord: 517..583 score: 7.2E-149coord: 184..484 score: 7.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 89..152 score: 4.01