CmaCh09G000080.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTTCTTTTCATTTCTTATATCTTATTTAGTCTTTTCCGTATGCAAATTAGTCAAGGGTGCCTTCCTTGGTGGCATGCATATGTGTGTGTGTGTGTGTGGGGTAACATCTTCTCCTCTCTTCATATACTCTCCCTCCCTTTACTATAAATACTCTCCAACTCTGCTTCGAGTTTTATACCCACTAATCTATTAACTGAAGGCCACGCCATTCCAAATCGAGAGACAAGGAGACAGAGAGATAGTGATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGCCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATAATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCACCTGATGAATGGGGAAGAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTCAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCTAGGTGTGTGTGCTATATACCATACATGCTGGGTTGGGCATTCATTAACTAAGTTTTTTTTTTTAATGATGCAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGTGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCGTCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGCCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCCAGCGTGCTTGGGACTGCCGCAAGATTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTTGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAACGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAATTATCTCTGACTCCAAAATCACACACAAACATATGCCTCCTTTCTACTCTTCCTCTTTCTTTCTTCCTTCCTTCCCTATTATTATTATTATTATTATTGATTTTCTGCATCCCCATCCTGCATATATATTATTTGAAAAATATCTACATATTATTTGCCAAG TCCTTTCTTTTCATTTCTTATATCTTATTTAGTCTTTTCCGTATGCAAATTAGTCAAGGGTGCCTTCCTTGGTGGCATGCATATGTGTGTGTGTGTGTGTGGGGTAACATCTTCTCCTCTCTTCATATACTCTCCCTCCCTTTACTATAAATACTCTCCAACTCTGCTTCGAGTTTTATACCCACTAATCTATTAACTGAAGGCCACGCCATTCCAAATCGAGAGACAAGGAGACAGAGAGATAGTGATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGCCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATAATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCACCTGATGAATGGGGAAGAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTCAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCTAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGTGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCGTCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGCCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCCAGCGTGCTTGGGACTGCCGCAAGATTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTTGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAACGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAATTATCTCTGACTCCAAAATCACACACAAACATATGCCTCCTTTCTACTCTTCCTCTTTCTTTCTTCCTTCCTTCCCTATTATTATTATTATTATTATTGATTTTCTGCATCCCCATCCTGCATATATATTATTTGAAAAATATCTACATATTATTTGCCAAG ATGAATAAGGGAATGATGAGCGGCAAACCCAATTTGAGGAAGACTAGAACTTTTTTCCTGCACAAGAACCAAACCTCGATGCAGCAGCCAATCATTCCGAACCAACCAGCTGAATCCGGAGAAGAGCATAATAATAATTATATTGAGAAAGAGAGCCCCCCGGGGGCGGTGAAATTCCCAGTGTCCCCTCACCTGATGAATGGGGAAGAGATGGTCCATTTCAGTCACCCTCGACACCGCCTGTCCCGGATGTGTAATCTCAACCTGTTTACGTGCGGCGGGTGCAAGGAGTACGGCGCCGGCAACGGATTCAGTTGCCAACAATGTGATTTCCAGCTCCACGACTTCTGCGCCTTCTCCCCTCCGGCCCTCAAGGCCCACCCCTTCCATTCCCACCACCAGCTTCTCTTTTACTCCAAGCTAGTGAAAGGGGGCATCATGCAGTCCAAGTGCGACATTTGTGCGAAGCCCATAAAAGGATTTGCGTTCCGATGCGGGGTGTGCAGCTTCCAGATGCACCCTTGCTGCGCGATGCTGTCCTTGGAAATGAAGATGCCGTCGGTGCACCCGCACCCGCTGAGGATGGTGGGAGCAACAACATCATCAGTAGTGGAGCAGCCGAGCAGCTTGGTGGGGTGCGGGGAGTGCAAGAGGAGGAGGTCGGGGAGGGTGTACCGTTGCACGGTGTGTGATTATCAGGTGCATGCAGTGTGCGCAAAGAGCGTGAAAAACGGCCTCCGGGAGAAGGGGTACAAGGAAACCGAGAAGGCCAGCGTGCTTGGGACTGCCGCAAGATTCGCTTCTCAGGTGGTGGTTGAGTTCTTGGGAGGCATCATCGAGGGCCTTGGAGAAGGGGTTGGCGAAGCCTTAGTCCAGAACATCAACGGCAAGGCCGCCCCCACACCTCTTCATCATCGTTAA MNKGMMSGKPNLRKTRTFFLHKNQTSMQQPIIPNQPAESGEEHNNNYIEKESPPGAVKFPVSPHLMNGEEMVHFSHPRHRLSRMCNLNLFTCGGCKEYGAGNGFSCQQCDFQLHDFCAFSPPALKAHPFHSHHQLLFYSKLVKGGIMQSKCDICAKPIKGFAFRCGVCSFQMHPCCAMLSLEMKMPSVHPHPLRMVGATTSSVVEQPSSLVGCGECKRRRSGRVYRCTVCDYQVHAVCAKSVKNGLREKGYKETEKASVLGTAARFASQVVVEFLGGIIEGLGEGVGEALVQNINGKAAPTPLHHR
BLAST of CmaCh09G000080.1 vs. TrEMBL
Match: A0A0A0L0U6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665110 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 6.5e-124 Identity = 230/313 (73.48%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TrEMBL
Match: M5WGS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017191mg PE=4 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 4.9e-95 Identity = 179/291 (61.51%), Postives = 213/291 (73.20%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TrEMBL
Match: I1KKM5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G159100 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 4.1e-94 Identity = 172/302 (56.95%), Postives = 219/302 (72.52%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TrEMBL
Match: K7N0L6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G006200 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 168/299 (56.19%), Postives = 216/299 (72.24%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TrEMBL
Match: A0A0B2QPZ2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_043761 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 163/270 (60.37%), Postives = 202/270 (74.81%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TAIR10
Match: AT1G20990.1 (AT1G20990.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 305.1 bits (780), Expect = 5.0e-83 Identity = 145/253 (57.31%), Postives = 189/253 (74.70%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22 Identity = 55/186 (29.57%), Postives = 85/186 (45.70%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19 Identity = 59/201 (29.35%), Postives = 86/201 (42.79%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TAIR10
Match: AT2G37780.1 (AT2G37780.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 85.9 bits (211), Expect = 4.8e-17 Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. TAIR10
Match: AT2G27660.1 (AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16 Identity = 56/180 (31.11%), Postives = 82/180 (45.56%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. NCBI nr
Match: gi|659105226|ref|XP_008453038.1| (PREDICTED: uncharacterized protein LOC103493863 [Cucumis melo]) HSP 1 Score: 455.3 bits (1170), Expect = 8.5e-125 Identity = 229/309 (74.11%), Postives = 250/309 (80.91%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. NCBI nr
Match: gi|778697312|ref|XP_004145611.2| (PREDICTED: uncharacterized protein LOC101220216 [Cucumis sativus]) HSP 1 Score: 451.8 bits (1161), Expect = 9.4e-124 Identity = 230/313 (73.48%), Postives = 248/313 (79.23%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. NCBI nr
Match: gi|470128299|ref|XP_004300081.1| (PREDICTED: uncharacterized protein LOC101308578 [Fragaria vesca subsp. vesca]) HSP 1 Score: 362.8 bits (930), Expect = 5.7e-97 Identity = 180/289 (62.28%), Postives = 216/289 (74.74%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. NCBI nr
Match: gi|595861084|ref|XP_007211272.1| (hypothetical protein PRUPE_ppa017191mg [Prunus persica]) HSP 1 Score: 355.9 bits (912), Expect = 7.0e-95 Identity = 179/291 (61.51%), Postives = 213/291 (73.20%), Query Frame = 1
BLAST of CmaCh09G000080.1 vs. NCBI nr
Match: gi|657943295|ref|XP_008364325.1| (PREDICTED: uncharacterized protein LOC103427985 [Malus domestica]) HSP 1 Score: 354.0 bits (907), Expect = 2.7e-94 Identity = 172/299 (57.53%), Postives = 214/299 (71.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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