CmaCh08G002080.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCATCTCTTCATAGAGCAAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCCATGCAACTCCCATCTAAAATGTATGAGCATTTGTCATTATGGATTTTATGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGTATTCCTTATAAGGGTGCGGAGACCTCTCCCTAGTAGACACATTTTAAACTGTGAGGCTGACAGTGATACATAACGGGCCAAAGCGGACAATATCTGCTAGTGGTGGCTTGGGCTGTTATAATTTAAACTAGGCTTGGGCCGTTACTGATGGTACATTTCAATGTGGAGTGTCCTATTGCACATTTCAATGTTCAGTGGCCTATTGTTGTATAATGCATGCATCATTTGGTGATTATGTGGATCATGTAGCTTACAAGATTTCTCAGTATTTTAGAATGATCCCGACCGCCAAGATTTATTCTTTATTATTTTCTTGCTTTTCAGGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCCCGTGCTTTGGTACGATCTACCCTTTCAAGATGTGAGTCCTTTTATTGTTATCATTTGTAATGTTTAGACTTGCACGATGAAAACTTTTTGGCACCAGACAGGTGTCAGTCTCTATACATCGTATTACCACTTAGCAGAATCCTGTGTTTTTAATAAACAGTCACTACCCCTGGTATGTGCTGCTTTCCTAATCAAAAGATTGGAGAGCACCCTTTCAGCGGGTTTGGGCGCTCTAGCCAAAACGAATCCTATTTCGGCTTGAGATTTGGAAATGAAAATGAAAGAGTATAGTGGCGATATTTACCATATATTTTAAATATGCCGTGCATGTTCTTTTTTGCAGTTATGCCTGAATTATGCTATTTTCTTTCTAGATGTTTCTCATTGTCAAATTGATCCACAAGCCTTGATGTTTAAAAAGAATATGTTTGGGAAGCCTGAGGTGATATCTTTTCCTCTTTTCATTTATTTACTGTTTACGTTCGATTTTTCTCGAGGTTTTGTGTAATTTCACGTTCTCTTCGTTTTTTGTTTTTCCATTTGTTCATATTTATATAATTGTTGAATAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCATGTGGAGTGACTATGAATTCTCCAGTAAGTGTCTACTTTACATGCTATATTTTCAACTTCTGCTATATCTTCTTTGGATTTGTAATGAGTAAATAATTTAAATTGTTAAACATAATTAACTTGTGTGATTTCTAATTCAGATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAAGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGTGAGTTGCAATAGCGTCCATGACGTATCGATTTTCTACTTACAATTGCATTTGAGATCTTAGGCACGTCTGTAAAGCTAATGTATGTCGAGATATTATCCTCTTTGGGCTTTCCCTTCTGAGCTTCTCTTCAAGGTTTTAAAATGTAAAATGTGTCTACTACTAGGGAGAGGTTTCCACATCCTTATAAGGAATGCTTCATTCCCCTCTCCAATCGATCTGGGGATCTCACAATCTACCTCCCTTCGGGGCTCAGTGTCTTCGCTGGCACTCGTTCCCTTCTCCAATCGATATGAGACCTCCCAATCCACATACCTTCGGGGCTCAGCGTCCTTGTTGGCAAACCACCCATTGTTTGGCTCTCATACCATTTGTAACTGTCAAAACCCACTGTTAGCAGACATTGTCCTCTTTGGGCTTTCGTTTTTGAGCTTTCCCTCAAAGTTTTAAAATATATCTACTAGGGAGAGGTTTTCACACCCCTTATAAGGAATGTTTCATTCCCCTCTCCAATCGATGTGGGATCTCACATCATTATTATTATTATTACCTCTAAACTATATTCTCGATTTTTATCTTGTGTGCATGGTTGATTATGGGAAATTTCTGGTAGGTATAAAGTCACTTCATCTGCATTTGAAAATTTCTTCTCTTCCTTTTTATTGGTGTAACCAGAATTCATTTACTGAAACTTTTATAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTCAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGTAAGCCATTCATCAAGACTCGAAGAGCGAGAGAAAAAACGGGAGATTCGAAATGGAATGTGAACCCTATATTGTTTGTCATATAGGCTTTACCAAATAAGCATGTAGCCAGCTTGTTGGGTTATTCTTTTACAATGCTTTAAAGAATATGAACAACCATTTTTTCTTCATGGTTCTTGTACTACGAATTTCATAAATGGCTGCTATGTTGTACCAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAATGTGACGTTTGCTTTGATGGAGTTGTTGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGTGAATATTAGAGGTGAAGTTCACTTTTACGATATCAAACAGTAACACTTGGTGATTGATATAAGCTTATACTTTGGTATAATTACAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAAGATGAATGTGTTTCTGGGACTGAGGCTGTTCTACCAATAAGTGGCTTTGCTTAAGGAAATGGAAAGTTCAAGATTCCACTCCAACTGGCCTGTGTTCAATTCTTATATCAAAACAAAACAATTCTCTTAGAAATGTTGTTTGAAGTTCTAAGCTGTAAACTTGTCCAAAATTTTGGAGTTGGGAGTCCTAAATGGCACCAAGGAGTTGTGATCTATTGATTTTGGCTTTTCTCAGGGAGTTATGAACTATTGTTAATCATAAACTGTCCATATTTTCAATGCTATGCTCTCGAGTCAAAACACTCTACAGTCATTCCCATCTCGTTGTGCACGAG ATGTTCTCATCTCTTCATAGAGCAAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCCATGCAACTCCCATCTAAAATGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCCCGTGCTTTGGTACGATCTACCCTTTCAAGATATGTTTCTCATTGTCAAATTGATCCACAAGCCTTGATGTTTAAAAAGAATATGTTTGGGAAGCCTGAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCATGTGGAGTGACTATGAATTCTCCAATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAAGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTCAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAATGTGACGTTTGCTTTGATGGAGTTGTTGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGTGAATATTAGAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAAGATGAATGTGTTTCTGGGACTGAGGCTGTTCTACCAATAAGTGGCTTTGCTTAAGGAAATGGAAAGTTCAAGATTCCACTCCAACTGGCCTGTGTTCAATTCTTATATCAAAACAAAACAATTCTCTTAGAAATGTTGTTTGAAGTTCTAAGCTGTAAACTTGTCCAAAATTTTGGAGTTGGGAGTCCTAAATGGCACCAAGGAGTTGTGATCTATTGATTTTGGCTTTTCTCAGGGAGTTATGAACTATTGTTAATCATAAACTGTCCATATTTTCAATGCTATGCTCTCGAGTCAAAACACTCTACAGTCATTCCCATCTCGTTGTGCACGAG ATGTTCTCATCTCTTCATAGAGCAAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCCATGCAACTCCCATCTAAAATGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCCCGTGCTTTGGTACGATCTACCCTTTCAAGATATGTTTCTCATTGTCAAATTGATCCACAAGCCTTGATGTTTAAAAAGAATATGTTTGGGAAGCCTGAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCATGTGGAGTGACTATGAATTCTCCAATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAAGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTCAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAATGTGACGTTTGCTTTGATGGAGTTGTTGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGTGAATATTAGAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAAGATGAATGTGTTTCTGGGACTGAGGCTGTTCTACCAATAAGTGGCTTTGCTTAA MFSSLHRARTRTNMHFFPRSFATAASPLVPMQLPSKMETHIWYILPDEVKNKDLQNHYLNLLSPNEKVNVMKIQEGELQKRALLARALVRSTLSRYVSHCQIDPQALMFKKNMFGKPELDLRISSELCLPPLQFNISHSSSLIACGVTMNSPIGIDVEEKTRKIKNNIIAFAKRFFSPNEIEVLSAISDPEIQRQEFIKLWTLKEAYVKALGRGFSATPFKTFTIRFNRTARGSCLPGCETNEKAYEVSVEPRDDPENCSRNVTFALMELLGSHYVAVCMKKDVNIRGTASLPMKLDVWRTIPYVEDECVSGTEAVLPISGFA
BLAST of CmaCh08G002080.1 vs. Swiss-Prot
Match: LP14_BACIU (4'-phosphopantetheinyl transferase OS=Bacillus subtilis GN=lpa-14 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16 Identity = 58/186 (31.18%), Postives = 91/186 (48.92%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. Swiss-Prot
Match: GSP_ANEMI (4'-phosphopantetheinyl transferase gsp OS=Aneurinibacillus migulanus GN=gsp PE=3 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 3.4e-15 Identity = 59/200 (29.50%), Postives = 104/200 (52.00%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. Swiss-Prot
Match: HETI_NOSS1 (4'-phosphopantetheinyl transferase HetI OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hetI PE=3 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 4.4e-15 Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. Swiss-Prot
Match: Y495_SYNY3 (Putative 4'-phosphopantetheinyl transferase slr0495 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0495 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. Swiss-Prot
Match: ADPPT_MOUSE (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhppt PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-06 Identity = 42/156 (26.92%), Postives = 68/156 (43.59%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TrEMBL
Match: A0A0A0KCD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042310 PE=4 SV=1) HSP 1 Score: 526.9 bits (1356), Expect = 1.7e-146 Identity = 262/310 (84.52%), Postives = 283/310 (91.29%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TrEMBL
Match: V4S7F2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011946mg PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 4.6e-104 Identity = 186/310 (60.00%), Postives = 241/310 (77.74%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TrEMBL
Match: A0A067G427_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020190mg PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 3.0e-103 Identity = 184/310 (59.35%), Postives = 240/310 (77.42%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TrEMBL
Match: A0A0D2NS54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G239100 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 9.7e-102 Identity = 188/311 (60.45%), Postives = 245/311 (78.78%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TrEMBL
Match: V4SWI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011946mg PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.1e-100 Identity = 186/334 (55.69%), Postives = 241/334 (72.16%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TAIR10
Match: AT3G11470.2 (AT3G11470.2 4'-phosphopantetheinyl transferase superfamily) HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83 Identity = 154/294 (52.38%), Postives = 212/294 (72.11%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. TAIR10
Match: AT2G02770.1 (AT2G02770.1 4'-phosphopantetheinyl transferase superfamily) HSP 1 Score: 247.7 bits (631), Expect = 1.0e-65 Identity = 124/271 (45.76%), Postives = 177/271 (65.31%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. NCBI nr
Match: gi|778710245|ref|XP_011656544.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Cucumis sativus]) HSP 1 Score: 535.8 bits (1379), Expect = 5.2e-149 Identity = 270/323 (83.59%), Postives = 292/323 (90.40%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. NCBI nr
Match: gi|659089866|ref|XP_008445723.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Cucumis melo]) HSP 1 Score: 530.4 bits (1365), Expect = 2.2e-147 Identity = 268/323 (82.97%), Postives = 287/323 (88.85%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. NCBI nr
Match: gi|700190793|gb|KGN45997.1| (hypothetical protein Csa_6G042310 [Cucumis sativus]) HSP 1 Score: 526.9 bits (1356), Expect = 2.4e-146 Identity = 262/310 (84.52%), Postives = 283/310 (91.29%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. NCBI nr
Match: gi|659089872|ref|XP_008445726.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X2 [Cucumis melo]) HSP 1 Score: 521.2 bits (1341), Expect = 1.3e-144 Identity = 261/310 (84.19%), Postives = 280/310 (90.32%), Query Frame = 1
BLAST of CmaCh08G002080.1 vs. NCBI nr
Match: gi|659089878|ref|XP_008445729.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X3 [Cucumis melo]) HSP 1 Score: 430.3 bits (1105), Expect = 3.1e-117 Identity = 215/253 (84.98%), Postives = 230/253 (90.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
|