CmaCh07G013800.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G013800.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Golgi SNAP receptor complex member 1
Location	Cma_Chr07 : 7917286 .. 7921249 (-)
Sequence length	461

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTATGGAAAGGGCATTGAGCCCAATTAAGCATTGTATACTGATATCTAAACCAAAATGAGTTTCGGGTGTGAATTTTGTAGATGGCAATGACAGATCAGAGCCTTGAATTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCCTATGCGAAGCTCGGTACCAGGTTCACTCAAGGAGGTTTGCTTTCTTCCTTTTTGCTTCACTTCACGGATCTCTGATTCTTTAGCCCTTTACGCATTTTAATCGCTGTATGTAAATTGTATTTGGTAGAGCTGTAATTTTCAGTCGATACTAGTTTCATCCTGCAGAGATGGATGGAAGTGACCCTTTCTCTGTGGTGGAACAATGGTAGTGTTTATGTGAGATGGTCGAGGATAACTCCAGCTACATTTCTTAGATTACTGAGATATGAATAATCAAATCAAAGATTTAACTACTGAAATTTCTTAAGATGATGATATTTATCTGTTATTTGATCATGGATCCTTACGCTGTAAATGATTTCCCGAAATCAACTGCTAATTCCATCGGGGCTTTAGATTATTATCAATGTGCTTCGGGAACTTTTGCATTACAGTTTACATTTTTTTCCTTTTCTTTTCGTAAGAATAATTTATGTAGAATTCCCTCAATGGAACCTCCGAATAGACATTGACTTTTTTGGATATTCGAAGTTGATGTTTTAAAAAAATTCAGATCTAACTTATGCCTTCTATGCTTCGCAAGCATATTCGTTGATCTGTGTTCTTTATACCATACTGATAAATTAAGTTTAATCCATTGACTTATGTTCTTAAATTGTTTGATGATCCCAAAACATCAAACCGGCCTTGTAGCATATAAATTGGTCTGGAACATATTTTAGTTCGGAAGTTAATAAAAGAATATCCAGAACCCTAAATTTTTCTATGCACCTCTCAACCACCACTAAAGGGCAAAGCATCTTTTGCCTCAATCTAAGCCAATGATTTGAATGTTTGTACTTCCAGTCCCAATTTCAGCATTACTTTGATTAAGCTTGCTAAGTGTAAACCTTGAATATATATTTTTTTTTCAGTCACATGATTCTTTTACACGTTCTGTATTTAGATTGCTTCAAGATCTTTCCCCTTTTCATAGCCCAAATTAAGTGCCGCTTGATTAAGTATACTGGTTTTATATTGTGGTCTTTGTTCTTAGATGAGATTGTGTGGATGATGGTTTATGTGTTTGTGATCAGGTTATGTGGATTCTAGTTCACCGTCTGTTGGTCCCAACAGATCATGGAAGTCTATGGAAATGGAAATCCAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATTTGCAGCACCAGCTACCTCTATAAATCAAAAACTAGCAAGACACAGGGATATTCTCCATGAATTTACACAGGTTTTGACTTAATTTTAATAATTCTTGTTATTATGACCAAGATCCTAATGAGTATTGATGATCTAAAGTTCCAAATTCTTTGATTCAGCTTAATGGTTGTGATCTTAATGCAATTATTTTGGGTCTTTGGTATGAAATTTATCAAATGCTATCTGAAGAAATGCATAGTGAATAGGAGGAAAGGGTTGACTGAGCAAGAAAACATGTGACTTCTTGGGGTACATTTTATTCGGTTTTACTTGGAAGCTTTATGAACAATGTGCTGTAATCCTCTTTGACAGAACCCCAATGTCCTGAATGAGGTGCCTTCTTTTATCCGAACTAAAAAAACCCACCTATCTAACCTTTTTAAGGCTTCACCACGTCTTATCATGTTTCCACCAGGGCCTTCCTCTTTCATCATTTATATCTCCTTTTGTTTTTTATAAGTGGACCAATTACTATACAATCAAGATACCATTTTTTTTGAACTAGAGCTTTTTATATCCTTCATTATTTCTTTTGTTGCTGTCTGGTTATGTATTTTGTTCTTTCATTTGGTATTTTATGTATTTATTTCTTAGTTTGGTCTTGATGTTGTTGTTTTCTTTACTCTCTTTCACTCATTTTGGAGTTTATATAATCGAGATGCCATCTTAGATCATTTAAATTCTAAGCTTGTTAGAGTTCAGCAACATATAAAGCACGCTGCTGATTCCCATTGCTGGGATGTTTAGTTTTAGGTTGGTGACCACGTTTTCCTTTAGCTCCAGCCTTACATGTTGTGTTTTTTAGTGAAACAATCAGAATGAGAAATTTGGCTCTTCAATTTTATGGTTCACTTCCCATTGTGTGTATCCCTTTTTCCCATTGTGTTCAAGGTTGATTAGGAAGATTGTGAGTGCTACACAAGGAAAAAGAAATCTTGATTTTTAACCTTGTGACAAGTGATATCAAAGCGTGACTTATCTTGGCTGGTAACTCTCTCTTGTTCCCAGGAAAATGTCAGAAACTTTTGGCAATTGTGAGAGCCAGTTGGAGGGTTGTTTGGATAATCCACAGGATAATAGGATTTTTCTTCTCATTATTTAGGTGACTAAACATAATGACAGTATTAGAGAATTGAACTATCTTTTAAGAACTTTATGGTGAAGATGAAGGATCAGTTTAATGCAATGATAGGTGGTTTCATTACTTATACTTCTACTAAAAAAGGTTAAAGAATAACCTTGATTCTCTTAAGTAAGGTTTAGATATGGTTGGAGTTTAGAAAAAAGATCTTTTTGGTAAAGAGAGCTCTTGTAAGGACTCCCAACAAAGATACCGTTGAGTCTATAGAAGTGAAAATCCTAAAACCTAAGGTGCTTAATGGTTCTAGGCAAGCAAAGGAACCAAATAATTTTCTATGGGGTATTGAAGAATACTTCAAGGCATTGAAAAACCTAGAAGAAGGTAGAGTGGGTATTATAGGCATATACCGCTTCTGGGATGTCAAGCTATGGCAGCATACACATTTTTACGACGATGAAAATGTAGGAAGACTAAGGTTATACAAGATAACATCTGATTCTTCTCAAATAACTCAACCAATATCGGTTGTTTTTATTTTGTTTTTATTTTTATTTTTTTATTTTATATATATATATATATATTTTTTTTTTTTTATAAGAGACAATTTCATTGATGAGTGAAATTTACAAGAGGGGTGTATAAACCATGATGTTTGCAATGAGGGAGGTATAACTATAGGAAGTAAAAATATTAGACAGTTTACACCAAGATATAGCTTGGTAAACAACATTGTCAAAAAGTTTTGTGTAGGTCTGTGTCGTTTCTGCAAATATTCTCTGATTTCTTTCTTTCCACAGATTCCAAAAGAAAGCCATGATGAGGACCACATAGAGCATGGAGCTATCTAATGAAAGATAAGTTGAATGAATTTGAACTTAAGAAGGGAGTAAATGGGTTATGTCGGAAACTTCCCATTGTGTCAATCCCCTATTACTACAGTTGTTAGAATACAATAGTATCAACTCATGAACTTTGTTGAAGGATTAGGATAAGTGGGCAAAAAAAATGAAGAAATTACATCCAGGGTGCTTTAAAAAGGAAGAAATTACAACAGTGTAGGCAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAAGGATGCCGGGGGAGAATGTGAGGTGATGGTTTGCAGACGTTGAGGTCTGGCCTAGCTGGAGGCAGCAGCCAATCAAGGTAGAGGAGGGTCACGAAAGAAAGAAGGAAAAAAATGAAATGTCATGGAGAATATTTTGGAAGACACTGGGGCAAAGAGCTTGAAAAGAGTGAAACATTTGGGTTGAATGAGTTGAATTGGATGACTATGCATAAATTTATTGAGATCAAGTTGCCTTATATTTTAAACTGAAAGCCCGACACAATGTGGCAACACCTTACCCATGTGAAGAGAGTAAGTACCTAGTGGCTGCTGCAAGACACCTATGCTACTGCTATCCTCTGCCATGTCTGTGTGCGCAGA

mRNA sequence

AAGTATGGAAAGGGCATTGAGCCCAATTAAGCATTGTATACTGATATCTAAACCAAAATGAGTTTCGGGTGTGAATTTTGTAGATGGCAATGACAGATCAGAGCCTTGAATTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCCTATGCGAAGCTCGGTACCAGGTTCACTCAAGGAGGTTATGTGGATTCTAGTTCACCGTCTGTTGGTCCCAACAGATCATGGAAGTCTATGGAAATGGAAATCCAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATTTGCAGCACCAGCTACCTCTATAAATCAAAAACTAGCAAGACACAGGGATATTCTCCATGAATTTACACAGCTTAATGGTTGTGATCTTAATGCAATTATTTTGGGTCTTTGA

Coding sequence (CDS)

ATGGCAATGACAGATCAGAGCCTTGAATTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCCTATGCGAAGCTCGGTACCAGGTTCACTCAAGGAGGTTATGTGGATTCTAGTTCACCGTCTGTTGGTCCCAACAGATCATGGAAGTCTATGGAAATGGAAATCCAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATTTGCAGCACCAGCTACCTCTATAAATCAAAAACTAGCAAGACACAGGGATATTCTCCATGAATTTACACAGCTTAATGGTTGTGATCTTAATGCAATTATTTTGGGTCTTTGA

Protein sequence

MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQLNGCDLNAIILGL

Homology

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BLAST of CmaCh07G013800.1 vs. Swiss-Prot
Match: GOS12_ARATH (Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 2.1e-45
Identity = 95/128 (74.22%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQG---------------- 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQG                
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 63  --GYVDSSSPSVGPNRSWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHR 113
             GYVD+ SP+VG  RSWKSMEMEIQSLLEKLLD+NDSMSRCAA AAP TS+ QKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

[Close]

BLAST of CmaCh07G013800.1 vs. Swiss-Prot
Match: GOSR1_MOUSE (Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 1


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRFTQGG--------YVDSSSPSV---GPNRSWK 74
           WE+LR++AR++E +LD+KL S++KL T ++  G        Y   ++P +     +R ++
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFE 68

Query: 75  SMEMEIQSLLEKLLDVNDSM---SRCAAFAAPATSINQKLARHRDILHEFT 112
           +M +EI+ LL +L  VND M   +  A   +   ++   L RHRDIL ++T
Sbjct: 69  TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYT 119

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BLAST of CmaCh07G013800.1 vs. Swiss-Prot
Match: GOSR1_PONAB (Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRF----TQGGYVDSSSPS-----VGPNRSWKSM 74
           WE+LR++AR++E +LD+KL S++KL T +    T+ G  DSS  +        +R +++M
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETM 68

Query: 75  EMEIQSLLEKLLDVNDSM---SRCAAFAAPATSINQKLARHRDILHEFT 112
            +EI+ LL +L  VND M   +  A   +   ++   L RHRDIL ++T
Sbjct: 69  AIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYT 117

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BLAST of CmaCh07G013800.1 vs. Swiss-Prot
Match: GOSR1_HUMAN (Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-10
Identity = 41/113 (36.28%), Postives = 65/113 (57.52%), Query Frame = 1


Query: 13  SGWEELRREARKIEGDLDVKLSSYAKLGTRF----TQGGYVDSSSPSVGP-------NRS 72
           S WE+LR++AR++E +LD+KL S++KL T +    T+ G  D  S    P       +R 
Sbjct: 7   SYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRM 66

Query: 73  WKSMEMEIQSLLEKLLDVNDSM---SRCAAFAAPATSINQKLARHRDILHEFT 112
           +++M +EI+ LL +L  VND M   +  A   +   ++   L RHRDIL ++T
Sbjct: 67  FETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYT 119

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BLAST of CmaCh07G013800.1 vs. Swiss-Prot
Match: GOSR1_BOVIN (Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 36/111 (32.43%), Postives = 65/111 (58.56%), Query Frame = 1


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRFTQGG--------YVDSSSPSV---GPNRSWK 74
           WE+LR++AR++E +LD+KL S++KL T ++           Y   ++P +     +R ++
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFE 68

Query: 75  SMEMEIQSLLEKLLDVNDSMSRCAAFAAPAT---SINQKLARHRDILHEFT 112
           +M +EI+ LL +L  +ND M+   + A   +   ++   L RHRDIL ++T
Sbjct: 69  TMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYT 119

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BLAST of CmaCh07G013800.1 vs. TrEMBL
Match: A0A0A0L102_CUCSA (Golgi SNAP receptor complex member 1 OS=Cucumis sativus GN=Csa_4G438030 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.1e-52
Identity = 108/112 (96.43%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS SPSVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60

Query: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SWKSMEMEIQSLLEKLLDVNDSMSRCAA A PATSINQKLARHRDILHEFTQ
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQ 112

[Close]

BLAST of CmaCh07G013800.1 vs. TrEMBL
Match: W9QP30_9ROSA (Golgi SNAP receptor complex member 1 OS=Morus notabilis GN=L484_020869 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.9e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSW 62
           MTD SLELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYVD+ SP+VG +RSW
Sbjct: 1   MTDTSLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSSRSW 60

Query: 63  KSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           KSMEMEIQSLLEKLLD+NDSMSRCAA A PATS+ QKLARHRDILHEFTQ
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQ 110

[Close]

BLAST of CmaCh07G013800.1 vs. TrEMBL
Match: M5XL05_PRUPE (Golgi SNAP receptor complex member 1 OS=Prunus persica GN=PRUPE_ppa010682mg PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.6e-47
Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 4   TDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSWK 63
           TD +LELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYV+S SPSVG +RSWK
Sbjct: 3   TDSNLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVESGSPSVGSSRSWK 62

Query: 64  SMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SMEMEIQSLLEKLLD+NDSMSRCAA A PATS+ QKLARHRDILHEFTQ
Sbjct: 63  SMEMEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQ 111

[Close]

BLAST of CmaCh07G013800.1 vs. TrEMBL
Match: D7LCG6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903960 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-46
Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSW 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYVD+ SP+VG  RSW
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSW 60

Query: 63  KSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           KSMEMEIQSLLEKLLD+NDSMSRCAA AAP TS+ QKLARHRDILHE+TQ
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQ 110

[Close]

BLAST of CmaCh07G013800.1 vs. TrEMBL
Match: V4LHA8_EUTSA (Golgi SNAP receptor complex member 1 OS=Eutrema salsugineum GN=EUTSA_v10001610mg PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-46
Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSW 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYVD+ SP+VG  RSW
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSW 60

Query: 63  KSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           KSMEMEIQSLLEKLLD+NDSMSRCAA AAP TS+ QKLARHRDILHE+TQ
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQ 110

[Close]

BLAST of CmaCh07G013800.1 vs. TAIR10
Match: AT2G45200.2 (AT2G45200.2 golgi snare 12)

HSP 1 Score: 183.0 bits (463), Expect = 1.2e-46
Identity = 95/128 (74.22%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQG---------------- 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQG                
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 63  --GYVDSSSPSVGPNRSWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHR 113
             GYVD+ SP+VG  RSWKSMEMEIQSLLEKLLD+NDSMSRCAA AAP TS+ QKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

[Close]

BLAST of CmaCh07G013800.1 vs. NCBI nr
Match: gi|778694768|ref|XP_011653862.1| (PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-52
Identity = 108/112 (96.43%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS SPSVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60

Query: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SWKSMEMEIQSLLEKLLDVNDSMSRCAA A PATSINQKLARHRDILHEFTQ
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQ 112

[Close]

BLAST of CmaCh07G013800.1 vs. NCBI nr
Match: gi|659069374|ref|XP_008449502.1| (PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-51
Identity = 107/112 (95.54%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS S SVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSSSVGSNR 60

Query: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SWKSMEMEIQSLLEKLLDVNDSMSRCAA A PATSINQKLARHRDILHEFTQ
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQ 112

[Close]

BLAST of CmaCh07G013800.1 vs. NCBI nr
Match: gi|703070830|ref|XP_010088881.1| (Golgi SNAP receptor complex member 1-2 [Morus notabilis])

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-48
Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 1


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSW 62
           MTD SLELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYVD+ SP+VG +RSW
Sbjct: 1   MTDTSLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSSRSW 60

Query: 63  KSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           KSMEMEIQSLLEKLLD+NDSMSRCAA A PATS+ QKLARHRDILHEFTQ
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQ 110

[Close]

BLAST of CmaCh07G013800.1 vs. NCBI nr
Match: gi|596058525|ref|XP_007221009.1| (hypothetical protein PRUPE_ppa010682mg [Prunus persica])

HSP 1 Score: 196.1 bits (497), Expect = 3.8e-47
Identity = 97/109 (88.99%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 4   TDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSWK 63
           TD +LELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYV+S SPSVG +RSWK
Sbjct: 3   TDSNLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVESGSPSVGSSRSWK 62

Query: 64  SMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SMEMEIQSLLEKLLD+NDSMSRCAA A PATS+ QKLARHRDILHEFTQ
Sbjct: 63  SMEMEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQ 111

[Close]

BLAST of CmaCh07G013800.1 vs. NCBI nr
Match: gi|645253486|ref|XP_008232596.1| (PREDICTED: Golgi SNAP receptor complex member 1-2 [Prunus mume])

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-46
Identity = 96/109 (88.07%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 4   TDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNRSWK 63
           TD +LELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYV+S SPSVG +RSWK
Sbjct: 3   TDSNLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVESGSPSVGTSRSWK 62

Query: 64  SMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQ 113
           SME+EIQSLLEKLLD+NDSMSRCAA A PATS+ QKLARHRDILHEFTQ
Sbjct: 63  SMEIEIQSLLEKLLDINDSMSRCAASATPATSVTQKLARHRDILHEFTQ 111

The following BLAST results are available for this feature:

BLAST of CmaCh07G013800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GOS12_ARATH	2.1e-45	74.22	Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=...	[more]
GOSR1_MOUSE	4.8e-10	34.23	Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=2	[more]
GOSR1_PONAB	4.8e-10	36.70	Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1	[more]
GOSR1_HUMAN	4.8e-10	36.28	Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1	[more]
GOSR1_BOVIN	1.8e-09	32.43	Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1	[more]

BLAST of CmaCh07G013800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L102_CUCSA	2.1e-52	96.43	Golgi SNAP receptor complex member 1 OS=Cucumis sativus GN=Csa_4G438030 PE=3 SV=...	[more]
W9QP30_9ROSA	6.9e-48	89.09	Golgi SNAP receptor complex member 1 OS=Morus notabilis GN=L484_020869 PE=3 SV=1	[more]
M5XL05_PRUPE	2.6e-47	88.99	Golgi SNAP receptor complex member 1 OS=Prunus persica GN=PRUPE_ppa010682mg PE=3...	[more]
D7LCG6_ARALL	1.0e-46	86.36	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
V4LHA8_EUTSA	1.0e-46	86.36	Golgi SNAP receptor complex member 1 OS=Eutrema salsugineum GN=EUTSA_v10001610mg...	[more]

BLAST of CmaCh07G013800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45200.2	1.2e-46	74.22	golgi snare 12	[more]

BLAST of CmaCh07G013800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694768\|ref\|XP_011653862.1\|	3.0e-52	96.43	PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis sativus]	[more]
gi\|659069374\|ref\|XP_008449502.1\|	2.5e-51	95.54	PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis melo]	[more]
gi\|703070830\|ref\|XP_010088881.1\|	9.9e-48	89.09	Golgi SNAP receptor complex member 1-2 [Morus notabilis]	[more]
gi\|596058525\|ref\|XP_007221009.1\|	3.8e-47	88.99	hypothetical protein PRUPE_ppa010682mg [Prunus persica]	[more]
gi\|645253486\|ref\|XP_008232596.1\|	1.1e-46	88.07	PREDICTED: Golgi SNAP receptor complex member 1-2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR023601	Golgi_SNAP_su1

Vocabulary: **Cellular Component**
Term	Definition
GO:0000139	Golgi membrane
GO:0005801	cis-Golgi network
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006888	ER to Golgi vesicle-mediated transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh07G013800	CmaCh07G013800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013800.1	CmaCh07G013800.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013800.1.CDS.4	CmaCh07G013800.1.CDS.4	CDS
CmaCh07G013800.1.CDS.3	CmaCh07G013800.1.CDS.3	CDS
CmaCh07G013800.1.CDS.2	CmaCh07G013800.1.CDS.2	CDS
CmaCh07G013800.1.CDS.1	CmaCh07G013800.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013800.1.five_prime_UTR.1	CmaCh07G013800.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G013800.1.exon.4	CmaCh07G013800.1.exon.4	exon
CmaCh07G013800.1.exon.3	CmaCh07G013800.1.exon.3	exon
CmaCh07G013800.1.exon.2	CmaCh07G013800.1.exon.2	exon
CmaCh07G013800.1.exon.1	CmaCh07G013800.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023601	Golgi SNAP receptor complex, subunit 1	PANTHER	PTHR21094	GOS-28 SNARE- RELATED	coord: 1..112 score: 1.1