CmaCh07G005360.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G005360.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Lipase/lipooxygenase, PLAT/LH2 family protein
Location	Cma_Chr07 : 2316031 .. 2317332 (+)
Sequence length	1218

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCATTAACCATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTTCCCTCTCCGTCGTCGCTCTCTCCGATGTATTTTCTCTCTCCAATTTCTCCTCCATTTTAGCGATTAGAACCTAAAATGATTGACCAACATTTCCGATTTGTTTGATGCAGGATCCAGATTGCGTGTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGACTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAAAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCGGGTCCGCACCATGGCTGGTACTGCAACTACTTTGAGGTGACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAACAGTGGTTAGCCCTCGATACATCGCCCTATGTGTTGACCGCCATTCGGAATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGAGATTCAATCGTATTGTGGAATAAGGAAGCGGAAGAGTGTGCCCTTCTGATGTTGGTGTGTAAAAGTTGAATCGAGAGCAGTGCCTTGCTTTTTAGCTTTACTTTATGATTCGATCCATTATTGTGGGTTTGGTATGGTGTGGGTCACGAATCATGAATGCCTTTGCAATGCCAAAAGGACAAAAAATTATAATACCCCATTTTATTTCAGAACCCAATTAAAACTTGGTGTCGGCAACATAATGGGGAAAAAATATCTTTTGATTCATAGTCTTTGCTTTATGATTTAGAACAATCACCAACACTCAATCAATCTATGGATAATAAGATCGCGTAATGCGTTAATCGATTAGACCATAGTTTAGATGATGAAGATACGAAGATAAATTAAGTCGAACATGAAAACAATCTATTATCGATGCTGTTTTCACGATCTCGAGCCTTAAAAAATCTCTCTCTAAGCTCCAAAGTTCTTCTCCAAACTCTCATCAGACTCGCATTATCCTCCATTTTCATGGGAAGATTGTGATTTGGGCTGAATGAGAGGTGGATCGTTGATGGGCTAAGGGGTTTTTATATTTTACATGGTCTGGACTTCATTTTTGTCGTGTGTACAAATTGTTTTGTAGTTATATGGGCCGGCTTTGCTATGTATACCGACCAG

mRNA sequence

CACCCATTAACCATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTTCCCTCTCCGTCGTCGCTCTCTCCGATGATCCAGATTGCGTGTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGACTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAAAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCGGGTCCGCACCATGGCTGGTACTGCAACTACTTTGAGGTGACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAACAGTGGTTAGCCCTCGATACATCGCCCTATGTGTTGACCGCCATTCGGAATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGAGATTCAATCGTATTGTGGAATAAGGAAGCGGAAGAGTGTGCCCTTCTGATGTTGGTGTGTAAAAGTTGAATCGAGAGCAGTGCCTTGCTTTTTAGCTTTACTTTATGATTCGATCCATTATTGTGGGTTTGGTATGGTGTGGGTCACGAATCATGAATGCCTTTGCAATGCCAAAAGGACAAAAAATTATAATACCCCATTTTATTTCAGAACCCAATTAAAACTTGGTGTCGGCAACATAATGGGGAAAAAATATCTTTTGATTCATAGTCTTTGCTTTATGATTTAGAACAATCACCAACACTCAATCAATCTATGGATAATAAGATCGCGTAATGCGTTAATCGATTAGACCATAGTTTAGATGATGAAGATACGAAGATAAATTAAGTCGAACATGAAAACAATCTATTATCGATGCTGTTTTCACGATCTCGAGCCTTAAAAAATCTCTCTCTAAGCTCCAAAGTTCTTCTCCAAACTCTCATCAGACTCGCATTATCCTCCATTTTCATGGGAAGATTGTGATTTGGGCTGAATGAGAGGTGGATCGTTGATGGGCTAAGGGGTTTTTATATTTTACATGGTCTGGACTTCATTTTTGTCGTGTGTACAAATTGTTTTGTAGTTATATGGGCCGGCTTTGCTATGTATACCGACCAG

Coding sequence (CDS)

ATGGCCTCCAAATCTCCCCTCTTCCTCTCCCTCTCCCTTCTCCTTTCCCTCTCCGTCGTCGCTCTCTCCGATGATCCAGATTGCGTGTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGACTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGGAATCCTCATCAAAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCGCACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCGGGTCCGCACCATGGCTGGTACTGCAACTACTTTGAGGTGACCACAACGGGTGTCCACAGGCCCTGCGATCAAGCCCAGTTCACGGTGGAACAGTGGTTAGCCCTCGATACATCGCCCTATGTGTTGACCGCCATTCGGAATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAACCCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGA

Protein sequence

MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSGPLRLKQVI

Homology

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BLAST of CmaCh07G005360.1 vs. Swiss-Prot
Match: LOXH1_HUMAN (Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens GN=LOXHD1 PE=2 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 9.4e-07
Identity = 34/108 (31.48%), Postives = 47/108 (43.52%), Query Frame = 1


Query: 30   YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIKDLEKWGGLMGPDYNYFERGNLDIF 89
            YTV V+T  IL AGTD+ +   ++  NGD   + +K    W        N FER N D F
Sbjct: 1609 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1668

Query: 90   SGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTG----VHRPCD 132
            +         +C L +  D  G   GW+ +Y +V         H  CD
Sbjct: 1669 NFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCD 1708

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BLAST of CmaCh07G005360.1 vs. Swiss-Prot
Match: LOXH1_MOUSE (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06
Identity = 31/94 (32.98%), Postives = 44/94 (46.81%), Query Frame = 1


Query: 30   YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIKDLEKWGGLMGPDYNYFERGNLDIF 89
            YTV V+T  IL AGTD+ +   ++  NGD   + +K    W        N FER N D F
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANW--------NKFERNNTDTF 1741

Query: 90   SGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEV 122
            +         +C L +  D  G   GW+ +Y +V
Sbjct: 1742 NFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDV 1767

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BLAST of CmaCh07G005360.1 vs. TrEMBL
Match: A0A0A0KGA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500520 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.6e-75
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF S+  LLS S +A SD+PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 27  MATKSALFFSI--LLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 86

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 87  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 146

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES-IGSRRDPTRSGP--LRLK 180
           VTTTGVH PCDQ  FTVEQWLALD SPY LT I+NNCP  S   S RD  RSG   L+LK
Sbjct: 147 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 206

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BLAST of CmaCh07G005360.1 vs. TrEMBL
Match: A0A0A0KLY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500530 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-70
Identity = 129/157 (82.17%), Postives = 137/157 (87.26%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA KS LFLS+  LLS S +A SDD DCVYTVY+RTGS LKAGTDSVI+ATLY+A+GD +
Sbjct: 1   MAYKSLLFLSI--LLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSVIAATLYSADGDEV 60

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            IKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNC 158
           VT TGVH PC+Q  FTVEQWLALD SPY LTAIRN C
Sbjct: 121 VTKTGVHMPCEQTLFTVEQWLALDVSPYELTAIRNEC 155

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BLAST of CmaCh07G005360.1 vs. TrEMBL
Match: W9RJ27_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003952 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.6e-64
Identity = 119/168 (70.83%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSD-DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDG 60
           M  +  L  SL   L+LSV+ +SD DPDCVYT+YVRTGS++K GTDS ISA L++++G G
Sbjct: 1   MELRRSLLFSL-FFLTLSVLVISDSDPDCVYTIYVRTGSVIKGGTDSKISAQLFSSDGYG 60

Query: 61  ILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYF 120
           ILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCL  P+C LNLTSDGSGPHHGWY NY 
Sbjct: 61  ILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLEEPICKLNLTSDGSGPHHGWYVNYV 120

Query: 121 EVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRD 168
           E+T+TGVH PC Q QF +EQWLA DTSPY LTAIR+ CPK   G   D
Sbjct: 121 EITSTGVHIPCHQQQFEIEQWLASDTSPYELTAIRDYCPKRGGGGGGD 167

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BLAST of CmaCh07G005360.1 vs. TrEMBL
Match: A0A161ZVA3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021845 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-63
Identity = 118/167 (70.66%), Postives = 136/167 (81.44%), Query Frame = 1


Query: 7   LFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIKDLE 66
           L + L ++LSL+ +  S+D DCVYT+YVRTGS+LKAGTDS+++ TL  ANG G+ IKDLE
Sbjct: 11  LSIHLFIVLSLASIVRSEDSDCVYTIYVRTGSVLKAGTDSIMTVTLSDANGWGVRIKDLE 70

Query: 67  KWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGV 126
           KWGGLMGP YNYFERGNLDIFSG+GPCLSAPVCS+NLTSDGSG HHGWYCNY EVT+TG 
Sbjct: 71  KWGGLMGPGYNYFERGNLDIFSGKGPCLSAPVCSMNLTSDGSGSHHGWYCNYVEVTSTGA 130

Query: 127 HRPCDQAQFTVEQWLALDTSPYVLTAIRNNC-PKESIGSRRDPTRSG 173
           H PC Q  FTVEQWLA DTSPY LTA+RN C  KE  G+R+    SG
Sbjct: 131 HVPCAQKTFTVEQWLATDTSPYELTAVRNYCKAKEEGGARKMLKGSG 177

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BLAST of CmaCh07G005360.1 vs. TrEMBL
Match: A0A068U1F2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036485001 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.4e-63
Identity = 115/155 (74.19%), Postives = 129/155 (83.23%), Query Frame = 1


Query: 7   LFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIKDLE 66
           L+  L +LLS+  ++ SDDPDCVY+VY+RTGSILK GTDS+IS TLY A+G GI I DLE
Sbjct: 9   LWFPLFILLSIFTISRSDDPDCVYSVYIRTGSILKGGTDSIISLTLYDADGYGIRINDLE 68

Query: 67  KWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGV 126
            WGGLMGP YNYFERGNLDIFSGRGPCL+ PVC++NLTSDGSG HHGWY NY EVTTTGV
Sbjct: 69  AWGGLMGPGYNYFERGNLDIFSGRGPCLTGPVCAMNLTSDGSGSHHGWYVNYVEVTTTGV 128

Query: 127 HRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES 162
           H+ C Q QFTVEQWLA DTSPY LTAIRN C  E+
Sbjct: 129 HKACFQQQFTVEQWLATDTSPYELTAIRNYCGGEN 163

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BLAST of CmaCh07G005360.1 vs. TAIR10
Match: AT4G39730.1 (AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 231.9 bits (590), Expect = 3.2e-61
Identity = 108/159 (67.92%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALS-DDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDG 60
           MA +  L   L LL ++S VA + DDPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  ILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYF 120
           I IK+L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NY 
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCP 159
           E+TT GVH  C    F +EQWLA DTSPY LTA+RNNCP
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP 159

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BLAST of CmaCh07G005360.1 vs. TAIR10
Match: AT2G22170.1 (AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 227.3 bits (578), Expect = 7.8e-60
Identity = 111/168 (66.07%), Postives = 130/168 (77.38%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLS-LSVVALSDDP-DCVYTVYVRTGSILKAGTDSVISATLYTANGD 60
           M  +  LFLSL L+++ +S VAL+DD  DCVYT ++RTGS  KAGTDS+ISA +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNY 120
            I I++LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 FEVTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCP---KESIG 164
            EVTT GVH  C    F VEQWLA DTSPY L+A+RNNCP   +ES+G
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVG 169

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BLAST of CmaCh07G005360.1 vs. TAIR10
Match: AT5G65158.1 (AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 147.5 bits (371), Expect = 7.8e-36
Identity = 67/104 (64.42%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 48  ISATLYTANGDGILIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDG 107
           +S  LY + G   +I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTSPYVL 151
           SG HHGWYCNY EVT +    R C Q +F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

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BLAST of CmaCh07G005360.1 vs. NCBI nr
Match: gi|659080097|ref|XP_008440609.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 1.7e-77
Identity = 148/182 (81.32%), Postives = 155/182 (85.16%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA KSPLFLS+  LLS S +A SDDPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MAYKSPLFLSI--LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 60

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIIDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSG--PLRLKQ 180
           VTTTGVHR CDQ  FTVEQWLALD  PY LTAI+NNCP  S  SRRD  RSG   L LKQ
Sbjct: 121 VTTTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGS-ESRRDLIRSGGPNLELKQ 179

[Close]

BLAST of CmaCh07G005360.1 vs. NCBI nr
Match: gi|659080095|ref|XP_008440608.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 7.3e-76
Identity = 145/182 (79.67%), Postives = 153/182 (84.07%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF +   LLS S +A SDDPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MATKSTLFFAF--LLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 60

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIIDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRDPTRSG--PLRLKQ 180
           VTTTGVHR CDQ  FTVEQWLALD  PY LTAI+NNCP  S  SRRD  RSG   L LKQ
Sbjct: 121 VTTTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGS-ESRRDLIRSGGPNLELKQ 179

[Close]

BLAST of CmaCh07G005360.1 vs. NCBI nr
Match: gi|449451447|ref|XP_004143473.1| (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 8.1e-75
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF S+  LLS S +A SD+PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 1   MATKSALFFSI--LLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 60

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES-IGSRRDPTRSGP--LRLK 180
           VTTTGVH PCDQ  FTVEQWLALD SPY LT I+NNCP  S   S RD  RSG   L+LK
Sbjct: 121 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 180

[Close]

BLAST of CmaCh07G005360.1 vs. NCBI nr
Match: gi|700193556|gb|KGN48760.1| (hypothetical protein Csa_6G500520 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 8.1e-75
Identity = 144/183 (78.69%), Postives = 153/183 (83.61%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA+KS LF S+  LLS S +A SD+PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI
Sbjct: 27  MATKSALFFSI--LLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGI 86

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 87  RIMDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLE 146

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKES-IGSRRDPTRSGP--LRLK 180
           VTTTGVH PCDQ  FTVEQWLALD SPY LT I+NNCP  S   S RD  RSG   L+LK
Sbjct: 147 VTTTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLK 206

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BLAST of CmaCh07G005360.1 vs. NCBI nr
Match: gi|659080099|ref|XP_008440610.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X3 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-73
Identity = 137/167 (82.04%), Postives = 146/167 (87.43%), Query Frame = 1


Query: 1   MASKSPLFLSLSLLLSLSVVALSDDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGI 60
           MA KSPLFLS+  LLS S +A SDD DCVYTVY+RTGS LKAGTDS I+ATLY+A+GD +
Sbjct: 1   MAYKSPLFLSI--LLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEV 60

Query: 61  LIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFE 120
            IKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY E
Sbjct: 61  RIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVE 120

Query: 121 VTTTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRNNCPKESIGSRRD 168
           VTTTGVHRPC+QA FTVEQWLALD SPY LTAIRNNC   S G +RD
Sbjct: 121 VTTTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGS-GIQRD 164

The following BLAST results are available for this feature:

BLAST of CmaCh07G005360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LOXH1_HUMAN	9.4e-07	31.48	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens GN=LOXHD1 PE=2...	[more]
LOXH1_MOUSE	1.6e-06	32.98	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus GN=Loxhd1 PE=2...	[more]

BLAST of CmaCh07G005360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGA0_CUCSA	5.6e-75	78.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500520 PE=4 SV=1	[more]
A0A0A0KLY3_CUCSA	3.2e-70	82.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500530 PE=4 SV=1	[more]
W9RJ27_9ROSA	7.6e-64	70.83	Uncharacterized protein OS=Morus notabilis GN=L484_003952 PE=4 SV=1	[more]
A0A161ZVA3_DAUCA	1.7e-63	70.66	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021845 PE=4 SV=1	[more]
A0A068U1F2_COFCA	6.4e-63	74.19	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036485001 PE=4 SV=1	[more]

BLAST of CmaCh07G005360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39730.1	3.2e-61	67.92	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	7.8e-60	66.07	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	7.8e-36	64.42	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

BLAST of CmaCh07G005360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080097\|ref\|XP_008440609.1\|	1.7e-77	81.32	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X2 [Cucumis...	[more]
gi\|659080095\|ref\|XP_008440608.1\|	7.3e-76	79.67	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X1 [Cucumis...	[more]
gi\|449451447\|ref\|XP_004143473.1\|	8.1e-75	78.69	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativ...	[more]
gi\|700193556\|gb\|KGN48760.1\|	8.1e-75	78.69	hypothetical protein Csa_6G500520 [Cucumis sativus]	[more]
gi\|659080099\|ref\|XP_008440610.1\|	1.2e-73	82.04	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X3 [Cucumis...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh07G005360	CmaCh07G005360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005360.1	CmaCh07G005360.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005360.1.exon.1	CmaCh07G005360.1.exon.1	exon
CmaCh07G005360.1.exon.2	CmaCh07G005360.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005360.1.five_prime_UTR.1	CmaCh07G005360.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005360.1.CDS.1	CmaCh07G005360.1.CDS.1	CDS
CmaCh07G005360.1.CDS.2	CmaCh07G005360.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005360.1.three_prime_UTR.1	CmaCh07G005360.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	GENE3D	G3DSA:2.60.60.20		coord: 28..145 score: 3.1
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..147 score: 3.3
IPR001024	PLAT/LH2 domain	PROFILE	PS50095	PLAT	coord: 28..155 score: 2
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 29..146 score: 9.5
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 1..180 score: 1.8E
None	No IPR available	PANTHER	PTHR31718:SF0	EXPRESSED PROTEIN-RELATED	coord: 1..180 score: 1.8E