CmaCh07G005070.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G005070.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	UDP-glycosyltransferase 1
Location	Cma_Chr07 : 2195235 .. 2195489 (-)
Sequence length	255

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCACCTCATTCCCTTCCTTGAGCTAGCCCACCGCCTCGTCCACCACCACAACCTCCACGCCACCCTCTTCGTCGTTTGCTCTGGCACCTCCGCCGCCGAGTCCCTCCTCCTCCAGAAATCCTCGGCCGTCAACATCGTGCCTCTTCGCCCCTCCGTCAGTCTCGACCCAACTGCCAATTTCATCGACAAAATCAAGGCCATAATGTCCGCCTCTCCCCCTCCGCTGCCCAGCCCCGCCCGGCGGCGCTGA

mRNA sequence

ATGGGCCACCTCATTCCCTTCCTTGAGCTAGCCCACCGCCTCGTCCACCACCACAACCTCCACGCCACCCTCTTCGTCGTTTGCTCTGGCACCTCCGCCGCCGAGTCCCTCCTCCTCCAGAAATCCTCGGCCGTCAACATCGTGCCTCTTCGCCCCTCCGTCAGTCTCGACCCAACTGCCAATTTCATCGACAAAATCAAGGCCATAATGTCCGCCTCTCCCCCTCCGCTGCCCAGCCCCGCCCGGCGGCGCTGA

Coding sequence (CDS)

ATGGGCCACCTCATTCCCTTCCTTGAGCTAGCCCACCGCCTCGTCCACCACCACAACCTCCACGCCACCCTCTTCGTCGTTTGCTCTGGCACCTCCGCCGCCGAGTCCCTCCTCCTCCAGAAATCCTCGGCCGTCAACATCGTGCCTCTTCGCCCCTCCGTCAGTCTCGACCCAACTGCCAATTTCATCGACAAAATCAAGGCCATAATGTCCGCCTCTCCCCCTCCGCTGCCCAGCCCCGCCCGGCGGCGCTGA

Protein sequence

MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPLRPSVSLDPTANFIDKIKAIMSASPPPLPSPARRR

Homology

[Close]

BLAST of CmaCh07G005070.1 vs. TrEMBL
Match: A0A0A0KGE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501940 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-14
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPLRPSV-SLDPT 60
          MGHLIPFLELA+RLV HHNL ATLFVV +G+S+AES LLQK S VNIV L  S+ SLDP 
Sbjct: 18 MGHLIPFLELANRLVLHHNLQATLFVVGTGSSSAESTLLQKPSLVNIVSLPHSLSSLDPN 77

Query: 61 ANFIDKIKAIMSASPPPLPS 80
          A   D I ++M+AS P L S
Sbjct: 78 APICDIIISMMTASFPFLRS 97

[Close]

BLAST of CmaCh07G005070.1 vs. TrEMBL
Match: A0A061DGH3_THECC (Glycosyltransferase OS=Theobroma cacao GN=TCM_000444 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-06
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSS--AVNIVPL---RPSVS 60
          +GHLIP LEL  RLV HHN   T+FV+ S  S A++ LL+ S+   +NIV L     S  
Sbjct: 16 LGHLIPVLELGKRLVTHHNFRITIFVLASEASTAQNQLLESSNMDVLNIVSLPSAEISTK 75

Query: 61 LDPTANFIDKIKAIMSASPPPLPS 80
          +DP A+ + KI  IM  S P L S
Sbjct: 76 VDPGAHIVTKIVVIMRESLPGLRS 99

[Close]

BLAST of CmaCh07G005070.1 vs. TrEMBL
Match: M5W740_PRUPE (Glycosyltransferase OS=Prunus persica GN=PRUPE_ppa005112mg PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.8e-06
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 1   MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSA---VNIVPL-RPSVS- 60
           MGHLIP +ELA RLV+HHN+  T+F V S TS AES LL+ +++    +I+ L  P +S 
Sbjct: 18  MGHLIPVIELAKRLVNHHNVMVTIFAVQSNTSEAESELLKAATSPKFCDIIELPLPDISG 77

Query: 61  -LDPTANFIDKIKAIMSASPPPLPS 80
            LDP A  + K++ +M    P   S
Sbjct: 78  LLDPDAGIVTKLRVMMREIRPAFRS 102

[Close]

BLAST of CmaCh07G005070.1 vs. TrEMBL
Match: F6GWZ0_VITVI (Glycosyltransferase OS=Vitis vinifera GN=VIT_04s0023g01290 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.5e-06
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 1   MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSA------VNIVPLRPSV 60
           MGHLIP LEL  RL+ HH    T+FVV +  S A+SLLLQ+++       V++  +  S+
Sbjct: 16  MGHLIPVLELGKRLITHHGFQVTVFVVATEVSPAQSLLLQQATTPHLPNLVSLPVVNDSI 75

Query: 61  SLDPTANFIDKIKAIMSASPPPLPS 80
            +DP A+ ++++ +++  S P L S
Sbjct: 76  LVDPEASVLEQLLSMVRGSLPRLRS 100

[Close]

BLAST of CmaCh07G005070.1 vs. TrEMBL
Match: A5BR04_VITVI (Glycosyltransferase OS=Vitis vinifera GN=VITISV_035786 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.5e-06
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 1   MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSA------VNIVPLRPSV 60
           MGHLIP LEL  RL+ HH    T+FVV +  S A+SLLLQ+++       V++  +  S+
Sbjct: 16  MGHLIPVLELGKRLITHHGFQVTVFVVATEVSPAQSLLLQQATTPHLPNLVSLPVVNDSI 75

Query: 61  SLDPTANFIDKIKAIMSASPPPLPS 80
            +DP A+ ++++ +++  S P L S
Sbjct: 76  LVDPEASVLEQLLSMVRGSLPRLRS 100

[Close]

BLAST of CmaCh07G005070.1 vs. TAIR10
Match: AT5G26310.1 (AT5G26310.1 UDP-Glycosyltransferase superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 6.1e-07
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPL-RPSVS--LD 60
          MGH++P +ELA RL  +H  H T+FV+ +  ++ +S LL  S+ V+IV L  P +S  +D
Sbjct: 16 MGHVLPVIELAKRLSANHGFHVTVFVLETDAASVQSKLL-NSTGVDIVNLPSPDISGLVD 75

Query: 61 PTANFIDKIKAIMSASPPPLPS 80
          P A+ + KI  IM  + P L S
Sbjct: 76 PNAHVVTKIGVIMREAVPTLRS 96

[Close]

BLAST of CmaCh07G005070.1 vs. NCBI nr
Match: gi|778722457|ref|XP_004143577.2| (PREDICTED: UDP-glycosyltransferase 72E1, partial [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 8.2e-14
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPLRPSV-SLDPT 60
          MGHLIPFLELA+RLV HHNL ATLFVV +G+S+AES LLQK S VNIV L  S+ SLDP 
Sbjct: 18 MGHLIPFLELANRLVLHHNLQATLFVVGTGSSSAESTLLQKPSLVNIVSLPHSLSSLDPN 77

Query: 61 ANFIDKIKAIMSASPPPLPS 80
          A   D I ++M+AS P L S
Sbjct: 78 APICDIIISMMTASFPFLRS 97

[Close]

BLAST of CmaCh07G005070.1 vs. NCBI nr
Match: gi|700193601|gb|KGN48805.1| (hypothetical protein Csa_6G501940 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 8.2e-14
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPLRPSV-SLDPT 60
          MGHLIPFLELA+RLV HHNL ATLFVV +G+S+AES LLQK S VNIV L  S+ SLDP 
Sbjct: 18 MGHLIPFLELANRLVLHHNLQATLFVVGTGSSSAESTLLQKPSLVNIVSLPHSLSSLDPN 77

Query: 61 ANFIDKIKAIMSASPPPLPS 80
          A   D I ++M+AS P L S
Sbjct: 78 APICDIIISMMTASFPFLRS 97

[Close]

BLAST of CmaCh07G005070.1 vs. NCBI nr
Match: gi|659081042|ref|XP_008441118.1| (PREDICTED: UDP-glycosyltransferase 72E1 [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 7.0e-13
Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSAVNIVPL-RPSVSLDPT 60
          MGHLIPFLELA+RLV HHNL ATLFVV +G+S+AE  LLQK S VNI+PL   S SLD  
Sbjct: 1  MGHLIPFLELANRLVLHHNLQATLFVVGTGSSSAEFALLQKPSPVNIIPLPHASSSLDSN 60

Query: 61 ANFIDKIKAIMSASPPPLPS 80
          A   + I ++M+AS P L S
Sbjct: 61 APIFNIISSMMTASFPFLRS 80

[Close]

BLAST of CmaCh07G005070.1 vs. NCBI nr
Match: gi|590703918|ref|XP_007047010.1| (UDP-glucosyl transferase 72E1, putative [Theobroma cacao])

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-06
Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1


Query: 1  MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSS--AVNIVPL---RPSVS 60
          +GHLIP LEL  RLV HHN   T+FV+ S  S A++ LL+ S+   +NIV L     S  
Sbjct: 16 LGHLIPVLELGKRLVTHHNFRITIFVLASEASTAQNQLLESSNMDVLNIVSLPSAEISTK 75

Query: 61 LDPTANFIDKIKAIMSASPPPLPS 80
          +DP A+ + KI  IM  S P L S
Sbjct: 76 VDPGAHIVTKIVVIMRESLPGLRS 99

[Close]

BLAST of CmaCh07G005070.1 vs. NCBI nr
Match: gi|595815243|ref|XP_007203879.1| (hypothetical protein PRUPE_ppa005112mg [Prunus persica])

HSP 1 Score: 58.2 bits (139), Expect = 8.3e-06
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 1   MGHLIPFLELAHRLVHHHNLHATLFVVCSGTSAAESLLLQKSSA---VNIVPL-RPSVS- 60
           MGHLIP +ELA RLV+HHN+  T+F V S TS AES LL+ +++    +I+ L  P +S 
Sbjct: 18  MGHLIPVIELAKRLVNHHNVMVTIFAVQSNTSEAESELLKAATSPKFCDIIELPLPDISG 77

Query: 61  -LDPTANFIDKIKAIMSASPPPLPS 80
            LDP A  + K++ +M    P   S
Sbjct: 78  LLDPDAGIVTKLRVMMREIRPAFRS 102

The following BLAST results are available for this feature:

BLAST of CmaCh07G005070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh07G005070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGE4_CUCSA	5.7e-14	66.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501940 PE=4 SV=1	[more]
A0A061DGH3_THECC	2.0e-06	46.43	Glycosyltransferase OS=Theobroma cacao GN=TCM_000444 PE=3 SV=1	[more]
M5W740_PRUPE	5.8e-06	44.71	Glycosyltransferase OS=Prunus persica GN=PRUPE_ppa005112mg PE=3 SV=1	[more]
F6GWZ0_VITVI	7.5e-06	38.82	Glycosyltransferase OS=Vitis vinifera GN=VIT_04s0023g01290 PE=3 SV=1	[more]
A5BR04_VITVI	7.5e-06	38.82	Glycosyltransferase OS=Vitis vinifera GN=VITISV_035786 PE=3 SV=1	[more]

BLAST of CmaCh07G005070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26310.1	6.1e-07	41.46	UDP-Glycosyltransferase superfamily protein	[more]

BLAST of CmaCh07G005070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722457\|ref\|XP_004143577.2\|	8.2e-14	66.25	PREDICTED: UDP-glycosyltransferase 72E1, partial [Cucumis sativus]	[more]
gi\|700193601\|gb\|KGN48805.1\|	8.2e-14	66.25	hypothetical protein Csa_6G501940 [Cucumis sativus]	[more]
gi\|659081042\|ref\|XP_008441118.1\|	7.0e-13	62.50	PREDICTED: UDP-glycosyltransferase 72E1 [Cucumis melo]	[more]
gi\|590703918\|ref\|XP_007047010.1\|	2.8e-06	46.43	UDP-glucosyl transferase 72E1, putative [Theobroma cacao]	[more]
gi\|595815243\|ref\|XP_007203879.1\|	8.3e-06	44.71	hypothetical protein PRUPE_ppa005112mg [Prunus persica]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh07G005070	CmaCh07G005070	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005070.1	CmaCh07G005070.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005070.1.CDS.1	CmaCh07G005070.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G005070.1.exon.1	CmaCh07G005070.1.exon.1	exon