CmaCh06G011030.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G011030.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Location	Cma_Chr06 : 7443674 .. 7447450 (-)
Sequence length	524

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAAGGAGGATTTCTTATTACAAAAAGTCTTTAAATCTGAAGCTGGGCACCCCAGCAGTGCGCAATGTGATGGATATGAATGCATTTTTTGGAGGCTTTGCTGCAGCCATAAGATCTGACCCAGTTTGGGTGATGAACGTTGTTCCTTCTCACAAGCCAGCCACTTTGGCTGCTTTATATGACCGAGGCTTAATTGGAGTCTACCACGATTGGTGAGTTTCAAATTGCTTACTTTAATTCTTCCTAGAGAATGTTTTCGAAACAGATTAGTGATCTTCCCTGGGATTTTAGCTAAAATTCTCTCTTTAAAGTTTAAACCATTATCATTCAATTTTTCTTTTTTGATAGCCACTTCTGAAGTATATATTTATTTTCTTCGTTTCGAGTTTCGAGAGGCCGGTGATGTGGGTACCCTCACAACTAGAATGTTTCGAATGCATTGTTTATTGATGAACCAATATTTGATGGTTTCAGGTGTGAGCCTTTCTCAACGTACCCACGTTCTTATGATTTTATCCACGTATCCGGAATCGAATCACTCGTTAGATATCCAGGTTTCGACAAGAGCAGGTTTGCATTGTTATTTTCACCCATTCTCAGTTATTTCTTTCTGCTGCCTTGTTATTCCCTTGTTTTCTACCGCAAATTTTCATTCATCAGTCTAAAGCTTTGACAACGAATGGCATGGCATAAAACCCAATGTAGTTTTTATGTAAAGAATAATATTGAGGTCTTTCGAGTTGATTCGAAGCGAACGAGTTTATCGACTCGAAACAAAATGATGGGTAGTTTAGTAAACTTCAAATTTAAAACTTAATAAATAGGCCAATCACTTATGACGATAAAGAAGAGTTAGTAGTTAATTCGTATTGTTCCCGAAAATAGTCATTCCCCCCTGAAAGCTTATCATCTAGTACAGTCTTTTCATTTGTATAACGTCCAGATGAAATTGTAAATTTTTGTATACCTTGTTCAAAGAAAAGAACTTCATATATAAATTTGCATATTTAACAACTTATCTTGATCTAATTTGTTGATCCCAAAAATAGGCTCTTTTTCATGTATTGTGGCTGTCCATATTATCCTAGCTTTATAATCAAACCAAGTAAAATGAACTTTTTGGCTCCCTGTAGGTGTAACCTTGTTGATCTAATGGTGGAAATGGACCGAATCTTACGTCCTGAAGGGACAGTAGTGATTCGAGATCATCCTGAAGTTATTGAAAGGGTAAACCGTATAGCTCGAGCAATAAGATGGACCACCACAATACACGAAAAAGAGGCAGGATCACAAGGAAGAGAAAAAATTCTCGTTGCAACCAAAAGCTTTTGGAAGCTACATTGAACATTGAAAGGATGATGGGGCTGTTTATCCTAGTGATCCAGGTATTATTCCTTTTTTGATCCCTATTTTAAGTCAATATAGTAGTGAAAGATTAGAAGGTGAAGAAAGCAAAAACAAATGGAAAGAAGCTGCACAGTAGGTGGCAAATATTCTTTGTTCTAGTTCTCATAATTTCAAAAGATTAGCTGATTTGTGTGTTTTTTGCGCCAATCTGATCACCATTTTCAACTTCCTGCATTAGCTAAATGTTTCCTTTTGCAGTAACTTTATTTATAGGGCATTTGGTAGCTTAAACTCATGCCTACTTTTATGGTGGAAATGGAGGTAATCCAAATCACCGATTCACGTGTATGTTTACGAAAATGCCCCGTAAAATATTTGTATTGGGAGACGTAAATTTGATTTGTGAACTTTTCTTTTATTTTGGTCTTTATATGTTCGTTTTATTTTAGTTCTGTGATCTTGTATTCAACTTGAGTATAGATCAAGTAATTAAAGCATATACCATCGCACGTAAGAAGTTAAAGATTTTGATCCCCCTCCTAGATATTCTTGAACTATATATATATATATCCGAAACAAAGTCGAGAACTATTGATCTTTAAGGTGGTAATTGGCTATGGATGATGACAAAAATTAGGATATAATTTAATCCATGGGTGTGTGGGAATGTTATGCCTTTTTTAGTAGCTAGAAAATGATGTTTTTATTGGTGGTTTGTAATTGACTTTTACTCCCTTGTTCTATTCAATTGGGAATGATCATATTATTATTGGCTTTAATTTTATTTAGAATTAAAAATTAATTGTCACTCTGTTTCATTCATTGTGATCTTGACACGTTTATGACAAGCTTTAAGAGGGACTCAAATTTCATTTATATTTTTTGCTCGACTTTGTGGCTTTACCGAACCTTTAGTGAGACTTGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATATCAATGGAGAGTGTATTCTCAGATTATAAACCCATGACCATTCCCTAAATTAACCGATGTGGGACTTTCATCATCCAACAAGACTTACCTTCGTCAACCGAGCATAACTTGTGCAAAATTTATTAATTAATTTGAATTAAACTATTTAAAATTGGGCAAATGATGTTAGAAATAGGGATTGGTATTTTACAAGCTTGACTATTGGTTCTAACGTAAGCAAGTTGACAACCATACAATTGGGTCGAGCCGAACTCAAGGGCAAAAAAGTAAATAGACTCAATATATATATATATATAAAAGAAAGATGAGTTTTAAGTGTGGTTGGGAAGCAAACATTCAATGCTTTGCTCTTAGACAGCCCCCCACCCTCTTATTTAATGTCCCTACACTTTTCTTTTAATATATATATATATATCTGCCTTAATTTGAATATATAAAAATATATTAATATTTATATATGAAAAATAGTGGGGACGAAAAATGTAATTCTCGGTCTCCGTCCTCATTTAGCTAACGAAAAAAAATATCTACTTGCTTATTTCCATTAGCAGCTCTACTCGAATTAAATAGACATTTCTACCCAAATGTTAACTAAGTTCATATATAATTTTTTAGATTTCTTTGTCTTCACTTATAAGCCGACACTTGTTTTATGTCTCCAACCAAACAAGTATTGTCCATATGTGTAGTCCATTTATTCAAACTCGATCATTAAAGCATCTATTATTATTATTATTATCATTAAATTAAAAAAAAAATTAAAATTTTTAAAAGTTGAATAATATTTTAAACAAATACTTTTGTTTTCCATCCAAAATTAACTTAATAGTATTTTTTTTAAAAAAAAAATCATTTTAAAAATATTTTTGGCACATTAAATAACGTAATAGTATTATATATATATTGTAATTTATTAATTTAACATATTTTAAACATTATGCAATATTTGAAAAAATGTATTTATTTAATGCACAGTAGGTTATAGGGTTTAAATTGATAATGTAAATAAACCACAAATAAAATTAATTTCCATATAAATCCATGAATTTAAAAATTAGATAACTACAAAAATAATAATTATAATAATGATAAATACAATTTAAAAAAAAAACATTAAAGTTAGAGCTAATTATAACATTTTTTAAAAATTAAAATGTACACTAATTTTGTGTTCTTCACCCCCGTTGACTGAAAACTGACAATTGATTTTACATTCAGCGAACAACAAATTATGTCTAAATTCTCGTGAATTTCGTGAAAAGTTGCTGTTCTTTCCATCGGATTCCCTCGCCGTTACATTTCTTCTTAAAGCTCTCCGTAAGTTCTCCAATTCCCCCAATCAATTTGATTCGATTTTCCAGCTTCACAGATTCTTCATCTTCTTTGAATTTTCCCTCAGGTCCCAGCTGA

mRNA sequence

GGGAAAGGAGGATTTCTTATTACAAAAAGTCTTTAAATCTGAAGCTGGGCACCCCAGCAGTGCGCAATGTGATGGATATGAATGCATTTTTTGGAGGCTTTGCTGCAGCCATAAGATCTGACCCAGTTTGGGTGATGAACGTTGTTCCTTCTCACAAGCCAGCCACTTTGGCTGCTTTATATGACCGAGGCTTAATTGGAGTCTACCACGATTGGTGTGAGCCTTTCTCAACGTACCCACGTTCTTATGATTTTATCCACGTATCCGGAATCGAATCACTCGTTAGATATCCAGGTTTCGACAAGAGCAGGTGTAACCTTGTTGATCTAATGGTGGAAATGGACCGAATCTTACGTCCTGAAGGGACAGTAGTGATTCGAGATCATCCTGAAGTTATTGAAAGGGATGATGGGGCTGTTTATCCTAGTGATCCAGTAACTTTATTTATAGGGCATTTGTTGCTGTTCTTTCCATCGGATTCCCTCGCCGTTACATTTCTTCTTAAAGCTCTCCGTCCCAGCTGA

Coding sequence (CDS)

ATGGATATGAATGCATTTTTTGGAGGCTTTGCTGCAGCCATAAGATCTGACCCAGTTTGGGTGATGAACGTTGTTCCTTCTCACAAGCCAGCCACTTTGGCTGCTTTATATGACCGAGGCTTAATTGGAGTCTACCACGATTGGTGTGAGCCTTTCTCAACGTACCCACGTTCTTATGATTTTATCCACGTATCCGGAATCGAATCACTCGTTAGATATCCAGGTTTCGACAAGAGCAGGTGTAACCTTGTTGATCTAATGGTGGAAATGGACCGAATCTTACGTCCTGAAGGGACAGTAGTGATTCGAGATCATCCTGAAGTTATTGAAAGGGATGATGGGGCTGTTTATCCTAGTGATCCAGTAACTTTATTTATAGGGCATTTGTTGCTGTTCTTTCCATCGGATTCCCTCGCCGTTACATTTCTTCTTAAAGCTCTCCGTCCCAGCTGA

Protein sequence

MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYDFIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIERDDGAVYPSDPVTLFIGHLLLFFPSDSLAVTFLLKALRPS

Homology

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BLAST of CmaCh06G011030.1 vs. Swiss-Prot
Match: PMTD_ARATH (Probable methyltransferase PMT13 OS=Arabidopsis thaliana GN=At4g00740 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-49
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAA + SDPVWVMNV+P+ KP TL  +YDRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 448 MDMNAFFGGFAATLASDPVWVMNVIPARKPLTLDVIYDRGLIGVYHDWCEPFSTYPRTYD 507

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHVSGIESL++     KSRC+LVDLMVEMDRILRPEG VVIRD PEV+++
Sbjct: 508 FIHVSGIESLIKRQDSSKSRCSLVDLMVEMDRILRPEGKVVIRDSPEVLDK 558

[Close]

BLAST of CmaCh06G011030.1 vs. Swiss-Prot
Match: PMTQ_ARATH (Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDM A +GGFAAA+R   VWVMNVVP   P TLA +Y+RGL G+YHDWCE FSTYPRSYD
Sbjct: 681 MDMRAVYGGFAAALRDLKVWVMNVVPIDSPDTLAIIYERGLFGIYHDWCESFSTYPRSYD 740

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIERDDGAV 117
            +H   + S +      K RCNL  ++ E+DR+LRPEG +++RD  E I++ +G V
Sbjct: 741 LLHADHLFSKL------KQRCNLTAVIAEVDRVLRPEGKLIVRDDAETIQQVEGMV 790

[Close]

BLAST of CmaCh06G011030.1 vs. Swiss-Prot
Match: PMTE_ARATH (Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNA  GGFAAA+ S   WVMNV+P+    TL+ +Y+RGLIG+YHDWCE FSTYPR+YD
Sbjct: 464 MDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWCEGFSTYPRTYD 523

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVI 110
           FIH SG+ SL ++       C L D+++E DRILRPEG V+ RD  +V+
Sbjct: 524 FIHASGVFSLYQH------SCKLEDILLETDRILRPEGIVIFRDEVDVL 566

[Close]

BLAST of CmaCh06G011030.1 vs. Swiss-Prot
Match: PMTO_ARATH (Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDM A +GGFAAA++   +WVMNVVP   P TL  +Y+RGL G+YHDWCE FSTYPR+YD
Sbjct: 622 MDMRAVYGGFAAALKDLKLWVMNVVPIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYD 681

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVI 110
            +H   + S +      K RCNLV +M E+DRILRP+GT ++RD  E I
Sbjct: 682 LLHADHLFSSL------KKRCNLVGVMAEVDRILRPQGTFIVRDDMETI 724

[Close]

BLAST of CmaCh06G011030.1 vs. Swiss-Prot
Match: PMT7_ARATH (Probable methyltransferase PMT7 OS=Arabidopsis thaliana GN=At5g04060 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-31
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MD NAF GGFAAA+ S P+WVMNVVP+    TL+ +Y RGL G YHDWCEPFSTYPR+YD
Sbjct: 455 MDTNAFIGGFAAAMNSYPLWVMNVVPATMNDTLSGIYQRGLTGAYHDWCEPFSTYPRTYD 514

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
            +H   + +  +  G     C L D+M+EMDRI+RP+G ++IRD   ++ R
Sbjct: 515 LLHADHLFTHYKIYG---EGCLLEDIMLEMDRIIRPQGFIIIRDEESIVSR 562

[Close]

BLAST of CmaCh06G011030.1 vs. TrEMBL
Match: A0A0A0L7I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G123200 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-56
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAAI+SDPVWVMNVVPSHKP+TLAA+YDRGLIGVYHDWCEPFSTYPRSYD
Sbjct: 445 MDMNAFFGGFAAAIKSDPVWVMNVVPSHKPSTLAAIYDRGLIGVYHDWCEPFSTYPRSYD 504

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHVSGIESLV YPG DKSRCNLVDLMVEMDR LRPEGTVVIRD+PE IER
Sbjct: 505 FIHVSGIESLVNYPGSDKSRCNLVDLMVEMDRFLRPEGTVVIRDNPEAIER 555

[Close]

BLAST of CmaCh06G011030.1 vs. TrEMBL
Match: A0A0D2SAB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G095900 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-50
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA+ SDPVWVMNVVP+ KP TL  +YDRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 446 MDMNAFFGGFAAALVSDPVWVMNVVPARKPLTLGVIYDRGLIGVYHDWCEPFSTYPRTYD 505

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHV+GIESL++ PG  KSRCNLVDLMVEMDR+LRPEGTVVIRD PEVI++
Sbjct: 506 FIHVAGIESLIKLPGSSKSRCNLVDLMVEMDRMLRPEGTVVIRDSPEVIDK 556

[Close]

BLAST of CmaCh06G011030.1 vs. TrEMBL
Match: A0A0D2QRL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G042500 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-50
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA++SDPVWVMNVVP+ KP TL  +YDRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 446 MDMNAFFGGFAAALKSDPVWVMNVVPARKPLTLDVIYDRGLIGVYHDWCEPFSTYPRTYD 505

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
            IHV+GIESL++ PG  KSRCNLVDLMVE+DR+LRPEGTVVIRD PEVIE+
Sbjct: 506 LIHVAGIESLIKLPGSSKSRCNLVDLMVEIDRMLRPEGTVVIRDSPEVIEK 556

[Close]

BLAST of CmaCh06G011030.1 vs. TrEMBL
Match: A0A0L9VR54_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g039000 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA++SDPVWVMNVVPSHKP TL A++DRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 447 MDMNAFFGGFAAALKSDPVWVMNVVPSHKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYD 506

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
            IHV+ IESL++ P   K+RCNLVDLMVE+DRILRPEGTVV+RD PEVIER
Sbjct: 507 LIHVTNIESLIKDPASAKNRCNLVDLMVELDRILRPEGTVVVRDTPEVIER 557

[Close]

BLAST of CmaCh06G011030.1 vs. TrEMBL
Match: A0A0S3SYP5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G145700 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA++SDPVWVMNVVPSHKP TL A++DRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 447 MDMNAFFGGFAAALKSDPVWVMNVVPSHKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYD 506

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
            IHV+ IESL++ P   K+RCNLVDLMVE+DRILRPEGTVV+RD PEVIER
Sbjct: 507 LIHVTNIESLIKDPASAKNRCNLVDLMVELDRILRPEGTVVVRDTPEVIER 557

[Close]

BLAST of CmaCh06G011030.1 vs. TAIR10
Match: AT4G00740.1 (AT4G00740.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAA + SDPVWVMNV+P+ KP TL  +YDRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 448 MDMNAFFGGFAATLASDPVWVMNVIPARKPLTLDVIYDRGLIGVYHDWCEPFSTYPRTYD 507

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHVSGIESL++     KSRC+LVDLMVEMDRILRPEG VVIRD PEV+++
Sbjct: 508 FIHVSGIESLIKRQDSSKSRCSLVDLMVEMDRILRPEGKVVIRDSPEVLDK 558

[Close]

BLAST of CmaCh06G011030.1 vs. TAIR10
Match: AT5G64030.1 (AT5G64030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 9.4e-35
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDM A +GGFAAA+R   VWVMNVVP   P TLA +Y+RGL G+YHDWCE FSTYPRSYD
Sbjct: 681 MDMRAVYGGFAAALRDLKVWVMNVVPIDSPDTLAIIYERGLFGIYHDWCESFSTYPRSYD 740

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIERDDGAV 117
            +H   + S +      K RCNL  ++ E+DR+LRPEG +++RD  E I++ +G V
Sbjct: 741 LLHADHLFSKL------KQRCNLTAVIAEVDRVLRPEGKLIVRDDAETIQQVEGMV 790

[Close]

BLAST of CmaCh06G011030.1 vs. TAIR10
Match: AT4G18030.1 (AT4G18030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-33
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNA  GGFAAA+ S   WVMNV+P+    TL+ +Y+RGLIG+YHDWCE FSTYPR+YD
Sbjct: 464 MDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWCEGFSTYPRTYD 523

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVI 110
           FIH SG+ SL ++       C L D+++E DRILRPEG V+ RD  +V+
Sbjct: 524 FIHASGVFSLYQH------SCKLEDILLETDRILRPEGIVIFRDEVDVL 566

[Close]

BLAST of CmaCh06G011030.1 vs. TAIR10
Match: AT1G29470.1 (AT1G29470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 8.8e-33
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDM A +GGFAAA++   +WVMNVVP   P TL  +Y+RGL G+YHDWCE FSTYPR+YD
Sbjct: 622 MDMRAVYGGFAAALKDLKLWVMNVVPIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYD 681

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVI 110
            +H   + S +      K RCNLV +M E+DRILRP+GT ++RD  E I
Sbjct: 682 LLHADHLFSSL------KKRCNLVGVMAEVDRILRPQGTFIVRDDMETI 724

[Close]

BLAST of CmaCh06G011030.1 vs. TAIR10
Match: AT5G04060.1 (AT5G04060.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MD NAF GGFAAA+ S P+WVMNVVP+    TL+ +Y RGL G YHDWCEPFSTYPR+YD
Sbjct: 455 MDTNAFIGGFAAAMNSYPLWVMNVVPATMNDTLSGIYQRGLTGAYHDWCEPFSTYPRTYD 514

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
            +H   + +  +  G     C L D+M+EMDRI+RP+G ++IRD   ++ R
Sbjct: 515 LLHADHLFTHYKIYG---EGCLLEDIMLEMDRIIRPQGFIIIRDEESIVSR 562

[Close]

BLAST of CmaCh06G011030.1 vs. NCBI nr
Match: gi|449432183|ref|XP_004133879.1| (PREDICTED: probable methyltransferase PMT13 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAAI+SDPVWVMNVVPSHKP+TLAA+YDRGLIGVYHDWCEPFSTYPRSYD
Sbjct: 445 MDMNAFFGGFAAAIKSDPVWVMNVVPSHKPSTLAAIYDRGLIGVYHDWCEPFSTYPRSYD 504

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHVSGIESLV YPG DKSRCNLVDLMVEMDR LRPEGTVVIRD+PE IER
Sbjct: 505 FIHVSGIESLVNYPGSDKSRCNLVDLMVEMDRFLRPEGTVVIRDNPEAIER 555

[Close]

BLAST of CmaCh06G011030.1 vs. NCBI nr
Match: gi|659075333|ref|XP_008438089.1| (PREDICTED: probable methyltransferase PMT13 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAAI+SDPVWVMNVVPSHKP+TLAA+YDRGLIGVYHDWCEPFSTYPRSYD
Sbjct: 445 MDMNAFFGGFAAAIKSDPVWVMNVVPSHKPSTLAAIYDRGLIGVYHDWCEPFSTYPRSYD 504

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHVSGIESLV YPG DK+RCNLVDLMVEMDR LRPEGTVV+RD+PEVIER
Sbjct: 505 FIHVSGIESLVNYPGSDKNRCNLVDLMVEMDRFLRPEGTVVVRDNPEVIER 555

[Close]

BLAST of CmaCh06G011030.1 vs. NCBI nr
Match: gi|1009163914|ref|XP_015900217.1| (PREDICTED: probable methyltransferase PMT13 [Ziziphus jujuba])

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA++SDPVWVMNVVP  +P TL  +YDRGLIG+YHDWCEPFSTYPRSYD
Sbjct: 448 MDMNAFFGGFAAALKSDPVWVMNVVPGRRPLTLPVIYDRGLIGLYHDWCEPFSTYPRSYD 507

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHV+GIESL+++PG  K+RCNLVDLMVEMDRILRPEGTVV+RD PEVI++
Sbjct: 508 FIHVNGIESLIKHPGSGKTRCNLVDLMVEMDRILRPEGTVVVRDSPEVIDK 558

[Close]

BLAST of CmaCh06G011030.1 vs. NCBI nr
Match: gi|823186496|ref|XP_012489879.1| (PREDICTED: probable methyltransferase PMT13 [Gossypium raimondii])

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-50
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA+ SDPVWVMNVVP+ KP TL  +YDRGLIGVYHDWCEPFSTYPR+YD
Sbjct: 446 MDMNAFFGGFAAALVSDPVWVMNVVPARKPLTLGVIYDRGLIGVYHDWCEPFSTYPRTYD 505

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHV+GIESL++ PG  KSRCNLVDLMVEMDR+LRPEGTVVIRD PEVI++
Sbjct: 506 FIHVAGIESLIKLPGSSKSRCNLVDLMVEMDRMLRPEGTVVIRDSPEVIDK 556

[Close]

BLAST of CmaCh06G011030.1 vs. NCBI nr
Match: gi|694447770|ref|XP_009349940.1| (PREDICTED: probable methyltransferase PMT13 [Pyrus x bretschneideri])

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-50
Identity = 89/111 (80.18%), Postives = 105/111 (94.59%), Query Frame = 1


Query: 1   MDMNAFFGGFAAAIRSDPVWVMNVVPSHKPATLAALYDRGLIGVYHDWCEPFSTYPRSYD 60
           MDMNAFFGGFAAA++SD VWVMNVVP+ KP+TL+ ++DRGLIGVYHDWCEPFSTYPRSYD
Sbjct: 447 MDMNAFFGGFAAALKSDAVWVMNVVPARKPSTLSVIFDRGLIGVYHDWCEPFSTYPRSYD 506

Query: 61  FIHVSGIESLVRYPGFDKSRCNLVDLMVEMDRILRPEGTVVIRDHPEVIER 112
           FIHV+GIESL+++PG  K+RCN+VDLMVEMDR+LRPEGTVV+RD PEVIE+
Sbjct: 507 FIHVTGIESLIKHPGSTKNRCNIVDLMVEMDRMLRPEGTVVVRDSPEVIEK 557

The following BLAST results are available for this feature:

BLAST of CmaCh06G011030.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PMTD_ARATH	2.8e-49	78.38	Probable methyltransferase PMT13 OS=Arabidopsis thaliana GN=At4g00740 PE=2 SV=1	[more]
PMTQ_ARATH	1.7e-33	55.17	Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=2 SV=1	[more]
PMTE_ARATH	2.4e-32	57.80	Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=2 SV=1	[more]
PMTO_ARATH	1.6e-31	55.96	Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=2 SV=1	[more]
PMT7_ARATH	2.0e-31	54.05	Probable methyltransferase PMT7 OS=Arabidopsis thaliana GN=At5g04060 PE=2 SV=1	[more]

BLAST of CmaCh06G011030.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7I8_CUCSA	2.9e-56	92.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G123200 PE=4 SV=1	[more]
A0A0D2SAB9_GOSRA	1.8e-50	82.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G095900 PE=4 SV=1	[more]
A0A0D2QRL9_GOSRA	5.2e-50	81.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G042500 PE=4 SV=1	[more]
A0A0L9VR54_PHAAN	1.2e-49	81.98	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g039000 PE=4 SV=1	[more]
A0A0S3SYP5_PHAAN	1.2e-49	81.98	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G145700 PE=...	[more]

BLAST of CmaCh06G011030.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00740.1	1.6e-50	78.38	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT5G64030.1	9.4e-35	55.17	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT4G18030.1	1.4e-33	57.80	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT1G29470.1	8.8e-33	55.96	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT5G04060.1	1.2e-32	54.05	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]

BLAST of CmaCh06G011030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432183\|ref\|XP_004133879.1\|	4.1e-56	92.79	PREDICTED: probable methyltransferase PMT13 [Cucumis sativus]	[more]
gi\|659075333\|ref\|XP_008438089.1\|	4.1e-56	91.89	PREDICTED: probable methyltransferase PMT13 [Cucumis melo]	[more]
gi\|1009163914\|ref\|XP_015900217.1\|	2.0e-50	81.08	PREDICTED: probable methyltransferase PMT13 [Ziziphus jujuba]	[more]
gi\|823186496\|ref\|XP_012489879.1\|	2.6e-50	82.88	PREDICTED: probable methyltransferase PMT13 [Gossypium raimondii]	[more]
gi\|694447770\|ref\|XP_009349940.1\|	4.4e-50	80.18	PREDICTED: probable methyltransferase PMT13 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004159	Put_SAM_MeTrfase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0052546	cell wall pectin metabolic process
biological_process	GO:0032259	methylation
cellular_component	GO:0005768	endosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005802	trans-Golgi network
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh06G011030	CmaCh06G011030	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh06G011030.1	CmaCh06G011030.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G011030.1.CDS.7	CmaCh06G011030.1.CDS.7	CDS
CmaCh06G011030.1.CDS.6	CmaCh06G011030.1.CDS.6	CDS
CmaCh06G011030.1.CDS.5	CmaCh06G011030.1.CDS.5	CDS
CmaCh06G011030.1.CDS.4	CmaCh06G011030.1.CDS.4	CDS
CmaCh06G011030.1.CDS.3	CmaCh06G011030.1.CDS.3	CDS
CmaCh06G011030.1.CDS.2	CmaCh06G011030.1.CDS.2	CDS
CmaCh06G011030.1.CDS.1	CmaCh06G011030.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G011030.1.five_prime_UTR.1	CmaCh06G011030.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh06G011030.1.exon.7	CmaCh06G011030.1.exon.7	exon
CmaCh06G011030.1.exon.6	CmaCh06G011030.1.exon.6	exon
CmaCh06G011030.1.exon.5	CmaCh06G011030.1.exon.5	exon
CmaCh06G011030.1.exon.4	CmaCh06G011030.1.exon.4	exon
CmaCh06G011030.1.exon.3	CmaCh06G011030.1.exon.3	exon
CmaCh06G011030.1.exon.2	CmaCh06G011030.1.exon.2	exon
CmaCh06G011030.1.exon.1	CmaCh06G011030.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004159	Putative S-adenosyl-L-methionine-dependent methyltransferase	PFAM	PF03141	Methyltransf_29	coord: 1..110 score: 4.6
None	No IPR available	PANTHER	PTHR10108	METHYLTRANSFERASE	coord: 29..111 score: 1.8
None	No IPR available	PANTHER	PTHR10108:SF763	METHYLTRANSFERASE PMT13-RELATED	coord: 29..111 score: 1.8