CmaCh05G007820.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G007820.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_12
Location	Cma_Chr05 : 4695477 .. 4697417 (+)
Sequence length	708

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAATGGATCGTCCTGGTTCTTGCGTTTTGCTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGCGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAGGAATACTTCCTTGTATTCCGTTGTATGATTTTCTTTCATGCTTTTCATTTGTTGTTCATTCAATTTGTGATTGATATTCACTCATATGTGTTCTTTCCTAGTTCGCTGTATGATTTATGAGGGAGTAATCATATAATATACCATTCCTTACATTTTTCAAACATTTTTCCAACTACTATGCTTAATTTCCAAGGGTTAATCACACAACAACGCACACACTCGATCTAAATAAACACTAAAGATAGAAGAGAGAAAACTCAAAGAAAAATATTGGCTAAAGGTTTCGGTGTATATATATATATATACCCATGTGAGCTAAAAACATTTTTCTCTAGTTTCCATAAGCTTCTGCATCTTTTGCAAAGTTTTTATTTCCTTTCTCTTTTCAAACACTTCAGGGTTCAATCAACTACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGGTAAAAAGTGATCTTGGACGGCTGAACAGGTACCTTTTTCAATACTTTTTGTTCTTCTGGGGTAATATCCTCTTAATCTGCATATATATATAAGATCGTGCATACTGTTAAGTAAGATCGAACACCAGAATCAAAATGAACAAACTGAAATAATCTTTGAAGTATTTGAAAGAACAAATCTCAAAAGAAAACTGGAAAGAACAAGAACGTAGGCAGATCCCATGCATGTTTGAAGTATTTGAAAGAACAAATCTCAAAAGAAAACTGGAAAGAACAAGAACTGACCAACTATTAAAAGCATCTATGTATTGAAATCTATGAGTCAAATTTAGAACCAATTCACCAACCTGCCATCGGTTTAAACAAAATCAGATATTTGGTATATTGGGGAACAAATTTAGATACCCTGTGAGCAGGACTGAATAGCTGATACCTGTTAAATGAGATATTGTCATTGTCAAGGATCAAATATTAACAAGTACAAGAGAAGCATGTAAACTATAAAGATTCAAGACATCGTAATGCAAAGACTTAAGAAATATGCGTTCCTCAGCAACATCACATCAATTAAGCTTTAAACTCCCACAAGGAAAACAAGTTCAATAAACTAGTTCATATGAAAGAAAACTTGCATACTTCAGAAGAAATAGAATAAGGTTGAGTATAAATATGTTAAAACACATTCATCACTGATATCAAACCAATTATATGTATTTCCAGCATCTGTAGTTTGTTCTTGCCTACCATCTGCAAGCCTCTCCTTACCCCATTTTATCATCATTAGCTGATTTTCTGGCAGGTGAAAGTTTAAGTTCCTTAAGTATTTCAGCCATTGGCTTTTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACAAATGCCGCCTGA

mRNA sequence

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAATGGATCGTCCTGGTTCTTGCGTTTTGCTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGCGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACTACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGCCATTGGCTTTTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACAAATGCCGCCTGA

Coding sequence (CDS)

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTAACCTTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACGGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAATGGATCGTCCTGGTTCTTGCGTTTTGCTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGCGGAGAGGATCTGAAGAGGAGTGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGGTTCAATCAACTACAGGATTTACAGATATAAGGAAGGGGACAGACAATGGATCATAGAACAAAAGCTGCCATTGGCTTTTGACGAATGCCCCAATGGCTTTTTCCTCTTGAACGAATTGAATGATCTATGGAGCGCCAAGAAGACAAATGCCGCCTGA

Protein sequence

MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAPPFPGSINYRIYRYKEGDRQWIIEQKLPLAFDECPNGFFLLNELNDLWSAKKTNAA

Homology

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BLAST of CmaCh05G007820.1 vs. TrEMBL
Match: A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 162/183 (88.52%), Postives = 174/183 (95.08%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           G+VILKL GGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

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BLAST of CmaCh05G007820.1 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-62
Identity = 129/187 (68.98%), Postives = 153/187 (81.82%), Query Frame = 1


Query: 1   MGLST-SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ +HY+ H +FL CNY+LLGAASSCIFLTLSLRLLPSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREE 120
            TI GA+SGCA AS  T RWY  HMV TVLTAIFQGS++VL++TRT++FLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNG---SGEDLKRSGKVQQFEDS 180
            G VILKL+GGLS LIFCLEW+V++LAF LKYY YVEG+G   SG  +K+S KVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 K-WAPPF 183
           K W  PF
Sbjct: 181 KDWPWPF 187

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BLAST of CmaCh05G007820.1 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 6.0e-61
Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           S+++S+S++HY+ H +FL CNY+LLGAASSCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 106 STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 165

Query: 66  ISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS+ T RWY  HMV TVLTAIFQGS++VL++TRT +FLG LKSYVREE G VIL
Sbjct: 166 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 225

Query: 126 KLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEG---NGSGEDLKRSGKVQQFEDSK-WAPP 183
           KL+GGL  +IFCLEW+VL LAF LKYY YVEG   NG    ++RS KVQQ ED K W  P
Sbjct: 226 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 285

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BLAST of CmaCh05G007820.1 vs. TrEMBL
Match: V4TB47_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 126/184 (68.48%), Postives = 148/184 (80.43%), Query Frame = 1


Query: 1   MGLSTS-SSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MG+S + +S S++ +H++ H +FL CNY+LLGAASSCIFLTLSLRLLPSVCGFF I LH 
Sbjct: 1   MGISLNPNSQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREE 120
            TIAGAISGCA AS+ + RWYG HMV TVLTAIFQGS++VLV+TRT++FLG+LKSYVREE
Sbjct: 61  LTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSK-W 180
            G VILKL+GGL  LIFCLEW+VL LAF LKYY YVEG      ++RS KV Q ED K W
Sbjct: 121 DGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEGGNGTPAVRRSAKVSQEEDLKDW 180

Query: 181 APPF 183
             PF
Sbjct: 181 PWPF 184

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BLAST of CmaCh05G007820.1 vs. TrEMBL
Match: B9RM10_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1076800 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 122/186 (65.59%), Postives = 148/186 (79.57%), Query Frame = 1


Query: 2   GLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFT 61
           G++  +  S+S++H++ H +FL CNY+LLGAASSCIFLTLSLRLLPS+CGFF+I LH  T
Sbjct: 3   GITLGNPQSVSQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSICGFFLILLHILT 62

Query: 62  IAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESG 121
           IAGA+SGCA AS+ T RWY  HMV TVLTAIFQGS++VL++TRT +FLG+LKSYVREE G
Sbjct: 63  IAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREEDG 122

Query: 122 TVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN----GSGEDLKRSGKVQQFEDSK 181
            VILKL+GGL  +IFCLEW+VL LAF LKYY YVEG+    G    ++RS KVQQ ED K
Sbjct: 123 EVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDVSSGGGNIGMRRSAKVQQEEDLK 182

Query: 182 -WAPPF 183
            W  PF
Sbjct: 183 DWPWPF 188

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BLAST of CmaCh05G007820.1 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-58
Identity = 115/180 (63.89%), Postives = 138/180 (76.67%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGL      SI  +HY  H LFL  NYVLLGA+SSCIFLTLSLRL+PS+CGFF+I LHA 
Sbjct: 1   MGLIPQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHAT 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIA A+SGCA AS    RWY  HM+ TVLTAIFQGS++VL++T T+NFL  L SYVRE+ 
Sbjct: 61  TIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKE 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
            ++ILKL+GGL  +IFCLEWIVLVLAF LKYY YV+G+ +G  +KR+GKVQ  E  K +P
Sbjct: 121 ASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNSP 180

[Close]

BLAST of CmaCh05G007820.1 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-58
Identity = 116/178 (65.17%), Postives = 137/178 (76.97%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           SSS+ +  +HY+ H +FL  NY+LLGAASSCIFLTLSLRL+PS+CGF +I LHA TIA A
Sbjct: 5   SSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAA 64

Query: 66  ISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS    RWY  HMV TVLTAIFQGS++VL++T T+ FLG LKSYVREE   VIL
Sbjct: 65  VSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVIL 124

Query: 126 KLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSK-WAPPF 183
           KL GGL  +IFCL+WIVLV AF LKYY YV+G G G  +KR+GKVQ  E+ K W  PF
Sbjct: 125 KLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG-GDGVAMKRTGKVQSEENPKDWPWPF 181

[Close]

BLAST of CmaCh05G007820.1 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 181.4 bits (459), Expect = 6.4e-46
Identity = 105/179 (58.66%), Postives = 134/179 (74.86%), Query Frame = 1


Query: 11  ISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASAATG-----RWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           + +++T      R YG HMV TVLTAIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKV-QQFEDSKWAPPFP 184
           KLSGGL  L+FCLEWIVLVLAF LKY  Y++ +   +D     KV +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD---DFKVRRQEEDLKDWPSYP 178

[Close]

BLAST of CmaCh05G007820.1 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 181.4 bits (459), Expect = 6.4e-46
Identity = 105/179 (58.66%), Postives = 134/179 (74.86%), Query Frame = 1


Query: 11  ISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASAATG-----RWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           + +++T      R YG HMV TVLTAIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKV-QQFEDSKWAPPFP 184
           KLSGGL  L+FCLEWIVLVLAF LKY  Y++ +   +D     KV +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD---DFKVRRQEEDLKDWPSYP 178

[Close]

BLAST of CmaCh05G007820.1 vs. NCBI nr
Match: gi|449442239|ref|XP_004138889.1| (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-85
Identity = 162/183 (88.52%), Postives = 174/183 (95.08%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180
           G+VILKL GGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFP 184
           PFP
Sbjct: 181 PFP 183

[Close]

BLAST of CmaCh05G007820.1 vs. NCBI nr
Match: gi|659082394|ref|XP_008441816.1| (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo])

HSP 1 Score: 318.5 bits (815), Expect = 9.5e-84
Identity = 160/184 (86.96%), Postives = 174/184 (94.57%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTS+SR+HYNIH LFLLCNY+LLGAASSCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRT +FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-GSGEDLKRSGKVQQFEDSKWA 180
           G+VILKL GGLSGLIFCLEW+VLVLAFCLKYY+YVEGN G+GE LKRS KVQQFEDS WA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTWA 180

Query: 181 PPFP 184
            PFP
Sbjct: 181 APFP 184

[Close]

BLAST of CmaCh05G007820.1 vs. NCBI nr
Match: gi|225467749|ref|XP_002265070.1| (PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera])

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-62
Identity = 129/187 (68.98%), Postives = 153/187 (81.82%), Query Frame = 1


Query: 1   MGLST-SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ +HY+ H +FL CNY+LLGAASSCIFLTLSLRLLPSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREE 120
            TI GA+SGCA AS  T RWY  HMV TVLTAIFQGS++VL++TRT++FLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNG---SGEDLKRSGKVQQFEDS 180
            G VILKL+GGLS LIFCLEW+V++LAF LKYY YVEG+G   SG  +K+S KVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 K-WAPPF 183
           K W  PF
Sbjct: 181 KDWPWPF 187

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BLAST of CmaCh05G007820.1 vs. NCBI nr
Match: gi|566191522|ref|XP_002315113.2| (hypothetical protein POPTR_0010s18640g [Populus trichocarpa])

HSP 1 Score: 242.3 bits (617), Expect = 8.6e-61
Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           S+++S+S++HY+ H +FL CNY+LLGAASSCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 106 STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 165

Query: 66  ISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS+ T RWY  HMV TVLTAIFQGS++VL++TRT +FLG LKSYVREE G VIL
Sbjct: 166 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 225

Query: 126 KLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEG---NGSGEDLKRSGKVQQFEDSK-WAPP 183
           KL+GGL  +IFCLEW+VL LAF LKYY YVEG   NG    ++RS KVQQ ED K W  P
Sbjct: 226 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 285

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BLAST of CmaCh05G007820.1 vs. NCBI nr
Match: gi|470132643|ref|XP_004302188.1| (PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca])

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-60
Identity = 130/191 (68.06%), Postives = 149/191 (78.01%), Query Frame = 1


Query: 1   MGLSTSSSTSISRA---HYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFL 60
           MG+  +S+ S++ A   HY+ H +FLLCNY+LLGAASSCIFLTLSLRLLPSVCGFF+I L
Sbjct: 1   MGIGLNSNPSVAGASPSHYHTHKVFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFVILL 60

Query: 61  HAFTIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVR 120
           H FTI GA+SGCA ASA TG+WYG HMV TVLTAIFQGS+ VL++TRT +FLGELKSYVR
Sbjct: 61  HFFTIVGAVSGCAAASAGTGKWYGAHMVATVLTAIFQGSVAVLIFTRTGDFLGELKSYVR 120

Query: 121 EESGTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGN-----GSGEDLKRSGKVQQ 180
           EE  +VILKL GGLS LIFCLEW+VL LAF LKYY  VEG+     G+     RS KVQQ
Sbjct: 121 EEDASVILKLGGGLSILIFCLEWVVLTLAFFLKYYASVEGDHIQLGGNSRAAMRSSKVQQ 180

Query: 181 FEDSK-WAPPF 183
            ED K W  PF
Sbjct: 181 EEDLKDWPWPF 191

The following BLAST results are available for this feature:

BLAST of CmaCh05G007820.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G007820.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHB3_CUCSA	1.6e-85	88.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1	[more]
D7ST03_VITVI	1.4e-62	68.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=...	[more]
B9HYG6_POPTR	6.0e-61	68.51	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2	[more]
V4TB47_9ROSI	1.1e-59	68.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1	[more]
B9RM10_RICCO	1.1e-59	65.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1076800 PE=4 SV=1	[more]

BLAST of CmaCh05G007820.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02640.1	3.3e-58	63.89	unknown protein	[more]
AT5G16250.1	3.3e-58	65.17	unknown protein	[more]
AT5G36800.1	6.4e-46	58.66	unknown protein	[more]
AT5G36710.1	6.4e-46	58.66	unknown protein	[more]

BLAST of CmaCh05G007820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442239\|ref\|XP_004138889.1\|	2.3e-85	88.52	PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus]	[more]
gi\|659082394\|ref\|XP_008441816.1\|	9.5e-84	86.96	PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]	[more]
gi\|225467749\|ref\|XP_002265070.1\|	2.1e-62	68.98	PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera]	[more]
gi\|566191522\|ref\|XP_002315113.2\|	8.6e-61	68.51	hypothetical protein POPTR_0010s18640g [Populus trichocarpa]	[more]
gi\|470132643\|ref\|XP_004302188.1\|	1.9e-60	68.06	PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh05G007820	CmaCh05G007820	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh05G007820.1	CmaCh05G007820.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G007820.1.exon.1	CmaCh05G007820.1.exon.1	exon
CmaCh05G007820.1.exon.2	CmaCh05G007820.1.exon.2	exon
CmaCh05G007820.1.exon.3	CmaCh05G007820.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G007820.1.CDS.1	CmaCh05G007820.1.CDS.1	CDS
CmaCh05G007820.1.CDS.2	CmaCh05G007820.1.CDS.2	CDS
CmaCh05G007820.1.CDS.3	CmaCh05G007820.1.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 1..186 score: 5.5
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 1..186 score: 5.5