CmaCh05G004940.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G004940.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	F-box protein
Location	Cma_Chr05 : 2344032 .. 2345060 (+)
Sequence length	1029

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGTACAAGAACAAGATGCTTCTTCTTCAAATCGTATCGACGACGACGGCTTCGATTCCCTTCCCGATTCTCTCGTTCTTCTGATCTTCAATTCTGTCTGCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGATTGTATCATTTCCTCCGATTCCGATTCCGATTCGGATTCCGGCCCTAACTCTCACCTCTTCAACTTCTTTAAATCTACCGTTAAATCCTTCTTCTATTTTATTTCCTCTATTCTCCTCAAATCCAAATTGCAGAAGTCTCCCGCGCAAATCCTCCGCCAGTTCTACTGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAAGATTTTGAAATTGAGAGAGTCGTTAAATGGAGAGCGGAGTTCGGTGATGCGCTTAGGAACTGTGTGATTTTGAGTTTTGAAAAGATTAGGAACTCCGATGGTCGAGAGGTGATGGAAGTGGATGGTGTTGATTTCGGTTTTGTCACAGGGATGAAAGCGAAAGTGCTCTGGATGATGGGCGCTCTGATGACGGCATCGGCGAGGCACCACGTGATGGCGGAGGTGGTGGTGGAGCATTTGGAGATGAAGAATCTGGTGTTGAGAGACAGGGGAGGGAATGGTGTGGTGGTGATGGAGGAGAATAGTTTAGAGGATTTTAGGAGATCGAGAATGTGCGGCGGCGGAGAGGCAGCGGGGAGGTGGCAGATGAGAACTAGGATACCGAGCACGACGGTGAGGATGAAGTACTGGCCGTTGCTGGAGATCCGGCAAGGGCTCTGTATGGAGGATGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCATAGATGAATCTACTGACGTGGAGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATGATGATGTGTACACAAACGCCGTGGCAGCGTTATTGACGAAGGGTAAGAGGTTTCAGTTTGAGATAAACTCTTTCTAG

mRNA sequence

ATGGCGGAAGTACAAGAACAAGATGCTTCTTCTTCAAATCGTATCGACGACGACGGCTTCGATTCCCTTCCCGATTCTCTCGTTCTTCTGATCTTCAATTCTGTCTGCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGATTGTATCATTTCCTCCGATTCCGATTCCGATTCGGATTCCGGCCCTAACTCTCACCTCTTCAACTTCTTTAAATCTACCGTTAAATCCTTCTTCTATTTTATTTCCTCTATTCTCCTCAAATCCAAATTGCAGAAGTCTCCCGCGCAAATCCTCCGCCAGTTCTACTGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAAGATTTTGAAATTGAGAGAGTCGTTAAATGGAGAGCGGAGTTCGGTGATGCGCTTAGGAACTGTGTGATTTTGAGTTTTGAAAAGATTAGGAACTCCGATGGTCGAGAGGTGATGGAAGTGGATGGTGTTGATTTCGGTTTTGTCACAGGGATGAAAGCGAAAGTGCTCTGGATGATGGGCGCTCTGATGACGGCATCGGCGAGGCACCACGTGATGGCGGAGGTGGTGGTGGAGCATTTGGAGATGAAGAATCTGGTGTTGAGAGACAGGGGAGGGAATGGTGTGGTGGTGATGGAGGAGAATAGTTTAGAGGATTTTAGGAGATCGAGAATGTGCGGCGGCGGAGAGGCAGCGGGGAGGTGGCAGATGAGAACTAGGATACCGAGCACGACGGTGAGGATGAAGTACTGGCCGTTGCTGGAGATCCGGCAAGGGCTCTGTATGGAGGATGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCATAGATGAATCTACTGACGTGGAGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATGATGATGTGTACACAAACGCCGTGGCAGCGTTATTGACGAAGGGTAAGAGGTTTCAGTTTGAGATAAACTCTTTCTAG

Coding sequence (CDS)

ATGGCGGAAGTACAAGAACAAGATGCTTCTTCTTCAAATCGTATCGACGACGACGGCTTCGATTCCCTTCCCGATTCTCTCGTTCTTCTGATCTTCAATTCTGTCTGCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGATTGTATCATTTCCTCCGATTCCGATTCCGATTCGGATTCCGGCCCTAACTCTCACCTCTTCAACTTCTTTAAATCTACCGTTAAATCCTTCTTCTATTTTATTTCCTCTATTCTCCTCAAATCCAAATTGCAGAAGTCTCCCGCGCAAATCCTCCGCCAGTTCTACTGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAAGATTTTGAAATTGAGAGAGTCGTTAAATGGAGAGCGGAGTTCGGTGATGCGCTTAGGAACTGTGTGATTTTGAGTTTTGAAAAGATTAGGAACTCCGATGGTCGAGAGGTGATGGAAGTGGATGGTGTTGATTTCGGTTTTGTCACAGGGATGAAAGCGAAAGTGCTCTGGATGATGGGCGCTCTGATGACGGCATCGGCGAGGCACCACGTGATGGCGGAGGTGGTGGTGGAGCATTTGGAGATGAAGAATCTGGTGTTGAGAGACAGGGGAGGGAATGGTGTGGTGGTGATGGAGGAGAATAGTTTAGAGGATTTTAGGAGATCGAGAATGTGCGGCGGCGGAGAGGCAGCGGGGAGGTGGCAGATGAGAACTAGGATACCGAGCACGACGGTGAGGATGAAGTACTGGCCGTTGCTGGAGATCCGGCAAGGGCTCTGTATGGAGGATGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCATAGATGAATCTACTGACGTGGAGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATGATGATGTGTACACAAACGCCGTGGCAGCGTTATTGACGAAGGGTAAGAGGTTTCAGTTTGAGATAAACTCTTTCTAG

Protein sequence

MAEVQEQDASSSNRIDDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDSDSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPAQILRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF

Homology

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BLAST of CmaCh05G004940.1 vs. Swiss-Prot
Match: FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-58
Identity = 142/341 (41.64%), Postives = 209/341 (61.29%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD++PD +V+ I N V DVKTLIRCR+VSKRFNSL   S+SL L++D I+ +   ++S
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA---TES 61

Query: 78  DSGPNSHLFNFFKSTVKSFFYFISSILLK--------SKLQKSPAQILRQFYWIQRLQIE 137
           DS  +S + +FF+S  KS    +  I  K        ++  K+PAQIL  F  I+ L++E
Sbjct: 62  DSEIDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVE 121

Query: 138 FPTKDFEIER--VVKWRAEFGDALRNCVILSFEK--IRNSDGREVMEV-DGV---DFGFV 197
               D ++E+   VKW+AEFG  L++CVI++F    +  S   E   V DGV   D  FV
Sbjct: 122 LYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFV 181

Query: 198 TGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRR 257
            G+K +V+W + ALM AS RH++M ++V +H EM+ L++RD  G G VVM+   ++++R 
Sbjct: 182 CGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRE 241

Query: 258 SRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDEST 317
           + + G  + + R   RT +PS  + M++ P L ++ G+C+E ATLVVVRPTG AS D   
Sbjct: 242 TEVRGDNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVASDDNDV 301

Query: 318 DVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           ++  E    A +   DD +Y  AV ALL K +R   E+NSF
Sbjct: 302 ELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

[Close]

BLAST of CmaCh05G004940.1 vs. Swiss-Prot
Match: FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-52
Identity = 136/328 (41.46%), Postives = 194/328 (59.15%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD LPD +++ I N V DVKTL+RC ++SKRFNSLVP S+SL L++D    S SDS  
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLD---HSVSDSPV 61

Query: 78  DSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPAQILRQFYWIQRLQIEFPTKDFEI 137
            +     LFN   S +      I+   L   L   P +IL +F  I+ L +E P  D ++
Sbjct: 62  VTSIFRSLFNGLVSLLSKPAKPITITTLSPSL---PFKILSRFDRIRNLDVELPGGDVKL 121

Query: 138 ER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMMGAL 197
           E+   VKW+AEFG  L++CVI++F           +E +  D  FVTG+K +V+W + AL
Sbjct: 122 EKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGES-DAEFVTGLKTRVVWTISAL 181

Query: 198 MTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQ 257
           M AS+RH++M EVV EH E+++LV+RD+   G VVM E  L++ R +      E      
Sbjct: 182 MAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKN 241

Query: 258 MRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVE-KEDADLALSA 317
            R+ +PS  + M++ P L+++ G+C+E ATLV+VRP+G        D E  +DA+LA  A
Sbjct: 242 KRSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG-------ADFEVGDDAELATEA 301

Query: 318 FEDDDVYTNAVAALLTKGKRFQFEINSF 343
           F  D +Y  AV ALL K K+   E+NSF
Sbjct: 302 FVGDCMYGEAVVALL-KCKKNALEMNSF 314

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BLAST of CmaCh05G004940.1 vs. Swiss-Prot
Match: FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.5e-41
Identity = 124/371 (33.42%), Postives = 185/371 (49.87%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD LPDSL+LLIF+ V DVK L RC  VS+RF+SLVP  +++ +++DC+IS D  S S
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 78  DS------------------GPNSHLFNFFKSTVKSFFYFISSILLKSKLQKS------- 137
           D                   G  S LF    + +   F  +  IL   +   S       
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143

Query: 138 -----------PAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSF 197
                      P Q+L+ F  I+ L+IE PT +  IE   ++KWRA+FG  L NC+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 198 EKIRNSDG-----REVMEVDG-VDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVVE 257
             +  S+        V E +G +   F T  G+K +V+W + +L+ ASARH+++  ++ E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 258 HLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWP 317
           H  +  LVL D  G GV+ M    LE+ R + +     +A     RT +P+  +R+ Y P
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELRVTPL-----SASSASKRTLVPALNMRLWYAP 323

Query: 318 LLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTK 343
            L++  G  ++ ATLV +RP+        +  E  DA     AFE+       VA +L K
Sbjct: 324 ELDLPDGTVLKGATLVAIRPS-------ESKKEVCDASWLSDAFEEP---FGTVAKMLIK 379

[Close]

BLAST of CmaCh05G004940.1 vs. Swiss-Prot
Match: FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.1e-27
Identity = 82/246 (33.33%), Postives = 131/246 (53.25%), Query Frame = 1


Query: 112 SPAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSFEKI---RNSD 171
           SP Q+L+ F  I+ L+IE P+ +  I+   ++KWRAEFG  L NCVIL    +    NSD
Sbjct: 150 SPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIPPTNSD 209

Query: 172 GRE--------VMEVDGVDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVVEHLEMK 231
             E        V +   +   F T  G+K +V+W + +L+ ASARH+++  ++ EH  + 
Sbjct: 210 KTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLD 269

Query: 232 NLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIR 291
           +LVL D  G GV+ M  + LE+ R   +     +A     RT +P+  +R+ Y P LE+ 
Sbjct: 270 SLVLTDVDGQGVLCMNRDQLEELRVKPL-----SASSASKRTLVPALNMRLWYAPSLELP 329

Query: 292 QGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQ 343
            G  ++ ATLV +RP         ++ +KE  D++  +   D+ Y    A +L K + + 
Sbjct: 330 DGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPY-GVAAKMLVKRRTYC 380

[Close]

BLAST of CmaCh05G004940.1 vs. Swiss-Prot
Match: FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.0e-27
Identity = 82/252 (32.54%), Postives = 133/252 (52.78%), Query Frame = 1


Query: 112 SPAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSFEKI------- 171
           SP Q+L+ F  I+ L+IE P+ +  I+   ++KWRAEFG  L NCVIL    +       
Sbjct: 159 SPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPNPMR 218

Query: 172 --RNSDGREVMEVDG--------VDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVV 231
             +  D   V+E  G        +   F T  G+K +V+W + +L+ ASARH+++  ++ 
Sbjct: 219 VSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIA 278

Query: 232 EHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYW 291
           EH  + +LVL D  G GV+ M  + LE+ R   +     AA     RT +P+  +R+ Y 
Sbjct: 279 EHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPL-----AASSASKRTLVPALNMRLWYA 338

Query: 292 PLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLT 343
           P LE+  G  ++ ATLV +RP         ++ +KE +D++  +   ++ Y  A A +L 
Sbjct: 339 PTLELPDGTVLKGATLVAIRP---------SESKKEVSDISWVSSAFEEPYETA-AKMLV 395

[Close]

BLAST of CmaCh05G004940.1 vs. TrEMBL
Match: A0A0A0LN04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.6e-105
Identity = 216/346 (62.43%), Postives = 262/346 (75.72%), Query Frame = 1


Query: 5   QEQDASSSNRI--------DDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVP 64
           Q+Q+ASSS+          D D F+SLPDSL+LLIFNSV DVKTLIRCRAVSKRFNSLVP
Sbjct: 9   QQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVP 68

Query: 65  HSDSLFLKIDCIISSDSDSDSDSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPAQI 124
           HSDSL LK+DC+ISSDSDSDS    NS L +FFKS +KSF   +S ILL+S+ Q SPAQI
Sbjct: 69  HSDSLSLKVDCVISSDSDSDSHQ--NSFLLSFFKSVLKSFLDLLSPILLQSESQNSPAQI 128

Query: 125 LRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGV 184
           LRQF  IQ LQIEFPT D ++ERVVKWRAEFGDAL++CVIL F +IR     E  +VD  
Sbjct: 129 LRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRKG-AIEEDDVDS- 188

Query: 185 DFGFVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSL 244
           D  F+ G+K+KV   +  ++TASARHHV+ EVV EHLEM++L LRDRGG GVVVME+  L
Sbjct: 189 DLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEKKGL 248

Query: 245 EDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNAS 304
           E+ RR RM  GGE A   + RTR+PSTTVRM++   +E+R+G+ MEDATLVVV+P+GN  
Sbjct: 249 EELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSGNGR 308

Query: 305 IDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
                +V+KEDA++A+ AFE DDVY  AV ALL KGKR+Q E+NSF
Sbjct: 309 KSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of CmaCh05G004940.1 vs. TrEMBL
Match: B9H746_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.9e-64
Identity = 153/330 (46.36%), Postives = 206/330 (62.42%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPDSL+LLIFNS+ D+K LIRCR+VSKRFNSLVP ++SL LK+DC+IS +SDSDS
Sbjct: 6   DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDS 65

Query: 78  DSGPNSHLFNFFKSTVKS---FFYFISSILLKSKLQKSPAQILRQFYWIQRLQIEFPTKD 137
                  LF  FKS +KS    F        +++ Q SPA+IL QF  I+ LQIE P  D
Sbjct: 66  -------LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAGD 125

Query: 138 FEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMM 197
            ++E+  V+KWRAEFG +L++CVIL F ++ N +G    E    +  F  G+K +V+W +
Sbjct: 126 LKLEKGAVIKWRAEFGKSLKSCVILGFRRVANPEGNSADE----EIDFTGGLKTRVVWAI 185

Query: 198 GALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAG 257
            AL+ ASARH+++ +VV  H EM+ LVL DR G G V ME+  L + R +   G  E  G
Sbjct: 186 SALIAASARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECREAARGGEWEEDG 245

Query: 258 RWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLAL 317
               RT +PS  +RM++   ++++ G+ ME  TLVVVRP            + EDA+LAL
Sbjct: 246 G---RTVVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSGGG-------DGEDAELAL 305

Query: 318 SAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
            AF    +Y  AV  LL K K +  E+NSF
Sbjct: 306 GAF-GGGIYGEAVQVLL-KNKSYLLEMNSF 312

[Close]

BLAST of CmaCh05G004940.1 vs. TrEMBL
Match: M1AK96_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.7e-61
Identity = 147/341 (43.11%), Postives = 208/341 (61.00%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPD L+ L+FN + D+KTLIRCR+VSKRFNSLVP +DSL L++D +IS+   +DS
Sbjct: 9   DGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISA---TDS 68

Query: 78  DSGPNSHLFNFFKSTVKSFFYFIS---SILLKSKLQKSPAQILRQFYWIQRLQIEFPTKD 137
           D   +S L  F +S +KS  + +S   ++   ++ Q SPAQILR+F  I+ LQIE P+ D
Sbjct: 69  DDDDDSFLIAFLRSIIKSLHHLVSPSKALPSPARSQNSPAQILREFERIRNLQIELPSGD 128

Query: 138 FEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMM 197
             +E+   ++W+A+FG  L++CVIL F   R+ DG       G   G   G+K +V+W +
Sbjct: 129 LRLEKGTTIRWKADFGKTLKSCVILGF---RSGDGGGGEAEFGGGAG--AGLKMRVVWTI 188

Query: 198 GALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCG------ 257
            AL+ ASARH++M EVV EH E++NLV++DR   G VVM++  L++ R S+  G      
Sbjct: 189 SALIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLKECRESQGEGEEAEVN 248

Query: 258 ---GGEAAGRW--QMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDEST 317
               G   G W    RT +P+  +RM +   +E+  G+ M  ATLVVVRPT         
Sbjct: 249 NASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPTNGGGERSEV 308

Query: 318 DVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           + +  D  LAL AF +D VY  AV  LL K + +  E+NSF
Sbjct: 309 EEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of CmaCh05G004940.1 vs. TrEMBL
Match: K4BTT0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 147/343 (42.86%), Postives = 207/343 (60.35%), Query Frame = 1


Query: 16  DDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDS 75
           + DGFD LPD L+ L+FN + D+KTLIRCR+VSKRFNSLVP +DSL L++D +IS+   +
Sbjct: 7   NSDGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISA---T 66

Query: 76  DSDSGPNSHLFNFFKSTVKSFFYFISS---ILLKSKLQKSPAQILRQFYWIQRLQIEFPT 135
           DSD   +S L  F +S +KS  + +S    +   ++ Q SPAQILR+F  I+ LQIE P+
Sbjct: 67  DSDDDDDSFLIAFLRSIIKSIHHLVSPSKVLPTPARSQNSPAQILREFERIRNLQIELPS 126

Query: 136 KDFEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLW 195
            D  +E+   ++W+A+FG  L++CVIL F   R+ DG       G   G   G+K +V+W
Sbjct: 127 GDLRLEKGTTIRWKADFGKTLKSCVILGF---RSGDGGGGEAEFGGGAG--AGLKMRVVW 186

Query: 196 MMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCG---- 255
            + AL+ ASARH++M EVV EH E++NLV++DR   G VVM++  L + R S+  G    
Sbjct: 187 TISALIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLRECRESQGEGEEAE 246

Query: 256 -----GGEAAGRW--QMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDE 315
                 G   G W    RT +P+  +RM +   +E+  G+ M  ATLVVVRPT       
Sbjct: 247 VNNASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPTNGGGERS 306

Query: 316 STDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
             + +  D  LAL AF +D VY  AV  LL K + +  E+NSF
Sbjct: 307 EVEEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of CmaCh05G004940.1 vs. TrEMBL
Match: A0A067KYY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15769 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.3e-60
Identity = 156/338 (46.15%), Postives = 209/338 (61.83%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPDSL+LLIFNSV D+KTLIRC +VSKRFNSLVP ++SLFL++D +IS D D+DS
Sbjct: 2   DGFDRLPDSLILLIFNSVSDIKTLIRCLSVSKRFNSLVPQTESLFLRVDRVISPDLDTDS 61

Query: 78  DSGPNSHLFNFFKSTVKSFFYFISS----ILLKSKLQKSPAQILRQFYWIQRLQIEFPTK 137
                  LF FFKS +KS     +         +  Q SPAQIL +F  I+ LQIE P  
Sbjct: 62  I------LFAFFKSLLKSIHDLFNCDQKPTATLTLTQNSPAQILCRFDRIRALQIELPAG 121

Query: 138 DFEIER--VVKWRAEFGDALRNCVILSFEKIR-NSDGREVMEVDGVDFGFVTGMKAKVLW 197
           D ++++  V+KWRA+FG  L++CVIL F     NSD         VDF    G+KA+V+W
Sbjct: 122 DLKLDKGVVIKWRADFGKTLKSCVILGFRTAAANSDDDSA----DVDFDVAEGLKARVVW 181

Query: 198 MMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEA 257
            + AL+ ASARH+++ EVV EH EM+ LVL+D+ G G VVM++   E  R  RM      
Sbjct: 182 TISALIAASARHYLLKEVVKEHKEMERLVLKDKEGEGKVVMDK---EGLRECRMETTAPE 241

Query: 258 AGRWQ---MRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDV---E 317
           +  W+    RT +PS  +RM++   +++  G  +E ATLVVVRP+     D  ++V   +
Sbjct: 242 SDEWEWEASRTMVPSVRMRMRHKRRVQLNNGSWVEGATLVVVRPSVGKDGDGRSEVAAAD 301

Query: 318 KEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
            EDA+LA +AF    VY  AV  LL K K +  E+NSF
Sbjct: 302 VEDAELATTAF-GGGVYGEAV-QLLLKSKGYLLEMNSF 324

[Close]

BLAST of CmaCh05G004940.1 vs. TAIR10
Match: AT1G78100.1 (AT1G78100.1 F-box family protein)

HSP 1 Score: 228.0 bits (580), Expect = 8.7e-60
Identity = 142/341 (41.64%), Postives = 209/341 (61.29%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD++PD +V+ I N V DVKTLIRCR+VSKRFNSL   S+SL L++D I+ +   ++S
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA---TES 61

Query: 78  DSGPNSHLFNFFKSTVKSFFYFISSILLK--------SKLQKSPAQILRQFYWIQRLQIE 137
           DS  +S + +FF+S  KS    +  I  K        ++  K+PAQIL  F  I+ L++E
Sbjct: 62  DSEIDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVE 121

Query: 138 FPTKDFEIER--VVKWRAEFGDALRNCVILSFEK--IRNSDGREVMEV-DGV---DFGFV 197
               D ++E+   VKW+AEFG  L++CVI++F    +  S   E   V DGV   D  FV
Sbjct: 122 LYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFV 181

Query: 198 TGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRR 257
            G+K +V+W + ALM AS RH++M ++V +H EM+ L++RD  G G VVM+   ++++R 
Sbjct: 182 CGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRE 241

Query: 258 SRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDEST 317
           + + G  + + R   RT +PS  + M++ P L ++ G+C+E ATLVVVRPTG AS D   
Sbjct: 242 TEVRGDNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVASDDNDV 301

Query: 318 DVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           ++  E    A +   DD +Y  AV ALL K +R   E+NSF
Sbjct: 302 ELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

[Close]

BLAST of CmaCh05G004940.1 vs. TAIR10
Match: AT1G22220.1 (AT1G22220.1 F-box family protein)

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-54
Identity = 136/328 (41.46%), Postives = 194/328 (59.15%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD LPD +++ I N V DVKTL+RC ++SKRFNSLVP S+SL L++D    S SDS  
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLD---HSVSDSPV 61

Query: 78  DSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPAQILRQFYWIQRLQIEFPTKDFEI 137
            +     LFN   S +      I+   L   L   P +IL +F  I+ L +E P  D ++
Sbjct: 62  VTSIFRSLFNGLVSLLSKPAKPITITTLSPSL---PFKILSRFDRIRNLDVELPGGDVKL 121

Query: 138 ER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMMGAL 197
           E+   VKW+AEFG  L++CVI++F           +E +  D  FVTG+K +V+W + AL
Sbjct: 122 EKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGES-DAEFVTGLKTRVVWTISAL 181

Query: 198 MTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQ 257
           M AS+RH++M EVV EH E+++LV+RD+   G VVM E  L++ R +      E      
Sbjct: 182 MAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKN 241

Query: 258 MRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVE-KEDADLALSA 317
            R+ +PS  + M++ P L+++ G+C+E ATLV+VRP+G        D E  +DA+LA  A
Sbjct: 242 KRSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG-------ADFEVGDDAELATEA 301

Query: 318 FEDDDVYTNAVAALLTKGKRFQFEINSF 343
           F  D +Y  AV ALL K K+   E+NSF
Sbjct: 302 FVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of CmaCh05G004940.1 vs. TAIR10
Match: AT1G30200.2 (AT1G30200.2 F-box family protein)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-42
Identity = 124/371 (33.42%), Postives = 185/371 (49.87%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           D FD LPDSL+LLIF+ V DVK L RC  VS+RF+SLVP  +++ +++DC+IS D  S S
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 78  DS------------------GPNSHLFNFFKSTVKSFFYFISSILLKSKLQKS------- 137
           D                   G  S LF    + +   F  +  IL   +   S       
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143

Query: 138 -----------PAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSF 197
                      P Q+L+ F  I+ L+IE PT +  IE   ++KWRA+FG  L NC+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 198 EKIRNSDG-----REVMEVDG-VDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVVE 257
             +  S+        V E +G +   F T  G+K +V+W + +L+ ASARH+++  ++ E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 258 HLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWP 317
           H  +  LVL D  G GV+ M    LE+ R + +     +A     RT +P+  +R+ Y P
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELRVTPL-----SASSASKRTLVPALNMRLWYAP 323

Query: 318 LLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTK 343
            L++  G  ++ ATLV +RP+        +  E  DA     AFE+       VA +L K
Sbjct: 324 ELDLPDGTVLKGATLVAIRPS-------ESKKEVCDASWLSDAFEEP---FGTVAKMLIK 379

[Close]

BLAST of CmaCh05G004940.1 vs. TAIR10
Match: AT4G18380.1 (AT4G18380.1 F-box family protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-28
Identity = 82/246 (33.33%), Postives = 131/246 (53.25%), Query Frame = 1


Query: 112 SPAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSFEKI---RNSD 171
           SP Q+L+ F  I+ L+IE P+ +  I+   ++KWRAEFG  L NCVIL    +    NSD
Sbjct: 150 SPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIPPTNSD 209

Query: 172 GRE--------VMEVDGVDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVVEHLEMK 231
             E        V +   +   F T  G+K +V+W + +L+ ASARH+++  ++ EH  + 
Sbjct: 210 KTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLD 269

Query: 232 NLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIR 291
           +LVL D  G GV+ M  + LE+ R   +     +A     RT +P+  +R+ Y P LE+ 
Sbjct: 270 SLVLTDVDGQGVLCMNRDQLEELRVKPL-----SASSASKRTLVPALNMRLWYAPSLELP 329

Query: 292 QGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQ 343
            G  ++ ATLV +RP         ++ +KE  D++  +   D+ Y    A +L K + + 
Sbjct: 330 DGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPY-GVAAKMLVKRRTYC 380

[Close]

BLAST of CmaCh05G004940.1 vs. TAIR10
Match: AT5G46170.1 (AT5G46170.1 F-box family protein)

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-28
Identity = 82/252 (32.54%), Postives = 133/252 (52.78%), Query Frame = 1


Query: 112 SPAQILRQFYWIQRLQIEFPTKDFEIER--VVKWRAEFGDALRNCVILSFEKI------- 171
           SP Q+L+ F  I+ L+IE P+ +  I+   ++KWRAEFG  L NCVIL    +       
Sbjct: 159 SPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPNPMR 218

Query: 172 --RNSDGREVMEVDG--------VDFGFVT--GMKAKVLWMMGALMTASARHHVMAEVVV 231
             +  D   V+E  G        +   F T  G+K +V+W + +L+ ASARH+++  ++ 
Sbjct: 219 VSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIA 278

Query: 232 EHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYW 291
           EH  + +LVL D  G GV+ M  + LE+ R   +     AA     RT +P+  +R+ Y 
Sbjct: 279 EHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPL-----AASSASKRTLVPALNMRLWYA 338

Query: 292 PLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLT 343
           P LE+  G  ++ ATLV +RP         ++ +KE +D++  +   ++ Y  A A +L 
Sbjct: 339 PTLELPDGTVLKGATLVAIRP---------SESKKEVSDISWVSSAFEEPYETA-AKMLV 395

[Close]

BLAST of CmaCh05G004940.1 vs. NCBI nr
Match: gi|659089131|ref|XP_008445343.1| (PREDICTED: F-box protein At1g22220 [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 2.7e-111
Identity = 226/352 (64.20%), Postives = 270/352 (76.70%), Query Frame = 1


Query: 1   MAEVQEQD-----ASSSNRI---DDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFN 60
           MA+ QEQ      +SSS+ I   D DGFDSLPDSL+LLIFNSV DVKTLIRCRAVSKRFN
Sbjct: 1   MAQQQEQQQNASSSSSSSMIHTNDHDGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFN 60

Query: 61  SLVPHSDSLFLKIDCIISSDSDSDSDSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKS 120
           SLVPHSDSL L +DC+ISSDSDSDSDS  NS L +FFKS VKSF   +S IL++S+ Q S
Sbjct: 61  SLVPHSDSLSLTVDCVISSDSDSDSDSDQNSFLLSFFKSVVKSFLDLLSPILVQSETQNS 120

Query: 121 PAQILRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVME 180
           PAQILRQF  IQ LQIEFPT D ++ERVVKWRAEFGDAL++CVIL F +IR    +  +E
Sbjct: 121 PAQILRQFLQIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIR----KGAIE 180

Query: 181 VDGVDFG--FVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVV 240
            D VD+   F+ G+K+KV   +  L+TASARHHV+ EVV EHLEM++LVLRDRGG GVVV
Sbjct: 181 EDDVDYNLDFIGGLKSKVFMTISTLITASARHHVLGEVVEEHLEMESLVLRDRGGEGVVV 240

Query: 241 MEENSLEDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVR 300
           ME+  LE+ RR RM  GGE A   + RTR+PSTTVRM++   +E+R+G+ MEDATLVVVR
Sbjct: 241 MEKKGLEELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHRGRVEVRRGMWMEDATLVVVR 300

Query: 301 PTGNASIDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           P+GN       DV+KEDA++A+ AFE DDVY  AV ALL KGKR+Q E+NSF
Sbjct: 301 PSGNCRKSGDGDVDKEDAEVAVKAFEGDDVYREAVEALLKKGKRYQLEMNSF 348

[Close]

BLAST of CmaCh05G004940.1 vs. NCBI nr
Match: gi|778670222|ref|XP_004150662.2| (PREDICTED: F-box protein At1g22220 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 3.7e-105
Identity = 216/346 (62.43%), Postives = 262/346 (75.72%), Query Frame = 1


Query: 5   QEQDASSSNRI--------DDDGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVP 64
           Q+Q+ASSS+          D D F+SLPDSL+LLIFNSV DVKTLIRCRAVSKRFNSLVP
Sbjct: 9   QQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVP 68

Query: 65  HSDSLFLKIDCIISSDSDSDSDSGPNSHLFNFFKSTVKSFFYFISSILLKSKLQKSPAQI 124
           HSDSL LK+DC+ISSDSDSDS    NS L +FFKS +KSF   +S ILL+S+ Q SPAQI
Sbjct: 69  HSDSLSLKVDCVISSDSDSDSHQ--NSFLLSFFKSVLKSFLDLLSPILLQSESQNSPAQI 128

Query: 125 LRQFYWIQRLQIEFPTKDFEIERVVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGV 184
           LRQF  IQ LQIEFPT D ++ERVVKWRAEFGDAL++CVIL F +IR     E  +VD  
Sbjct: 129 LRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRKG-AIEEDDVDS- 188

Query: 185 DFGFVTGMKAKVLWMMGALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSL 244
           D  F+ G+K+KV   +  ++TASARHHV+ EVV EHLEM++L LRDRGG GVVVME+  L
Sbjct: 189 DLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEKKGL 248

Query: 245 EDFRRSRMCGGGEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNAS 304
           E+ RR RM  GGE A   + RTR+PSTTVRM++   +E+R+G+ MEDATLVVV+P+GN  
Sbjct: 249 EELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSGNGR 308

Query: 305 IDESTDVEKEDADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
                +V+KEDA++A+ AFE DDVY  AV ALL KGKR+Q E+NSF
Sbjct: 309 KSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of CmaCh05G004940.1 vs. NCBI nr
Match: gi|657942413|ref|XP_008374968.1| (PREDICTED: F-box protein At1g22220-like [Malus domestica])

HSP 1 Score: 263.1 bits (671), Expect = 6.9e-67
Identity = 158/331 (47.73%), Postives = 211/331 (63.75%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPDSL+L IF+SV D+KTLIRCRAVSKRFNSLVPH+DSL L +D +ISSDSDSDS
Sbjct: 2   DGFDRLPDSLILQIFDSVSDIKTLIRCRAVSKRFNSLVPHTDSLILTVDRVISSDSDSDS 61

Query: 78  DSGPNSHLF-NFFKSTVKSFFYFISS--ILLKSKLQKSPAQILRQFYWIQRLQIEFPTKD 137
           ++   SHL   F KS +KS    +S+     +++ Q SPAQILR F+ ++ L IE P+ D
Sbjct: 62  ETDDVSHLLVAFLKSILKSLQDLVSAKPDPTQTRSQNSPAQILRSFHRVRSLSIELPSGD 121

Query: 138 FEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMM 197
             +E+  V+KWRAEFG  L+ CVIL F  +  S    V    G +  F  G+K +V+  +
Sbjct: 122 LRLEKGTVLKWRAEFGKTLKTCVILGFRSVVASGDNPVA---GEEADFAGGLKVRVVXTI 181

Query: 198 GALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAAG 257
            AL+ ASARH+++ EVV E   +++LVLRDR G G VVM +  L + RR   CG  E   
Sbjct: 182 SALIAASARHYLLKEVVREQRGLESLVLRDREGEGTVVMRKEGLRECRREDACGEAEEEE 241

Query: 258 RWQM-RTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDADLA 317
            W   R+++PS  +RM++   +E+R G+ +E ATLVVVRP        S   + ED DLA
Sbjct: 242 GWDRGRSKVPSVRMRMRHVARVELRGGVWVEGATLVVVRP--------SLGDDVEDGDLA 301

Query: 318 LSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           + AF +D +Y   V  LL K K +  E+NSF
Sbjct: 302 MEAFGNDGMYGEVVVELL-KAKSYLLEMNSF 320

[Close]

BLAST of CmaCh05G004940.1 vs. NCBI nr
Match: gi|645225641|ref|XP_008219667.1| (PREDICTED: F-box protein At1g22220 [Prunus mume])

HSP 1 Score: 262.7 bits (670), Expect = 9.0e-67
Identity = 162/335 (48.36%), Postives = 213/335 (63.58%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPDSL+L IF+SV DVKTLIRCRAVSKRFNSLVP +DSL L +D +ISSDSDSDS
Sbjct: 2   DGFDRLPDSLILQIFDSVSDVKTLIRCRAVSKRFNSLVPQTDSLLLTVDRVISSDSDSDS 61

Query: 78  DSGPNSHLF-NFFKSTVKSFFYFIS--SILLKSKLQKSPAQILRQFYWIQRLQIEFPTKD 137
            +   SHL   F KS +KS    +S      +++ Q SPAQILR F+ ++ L IE P+ D
Sbjct: 62  ANDDVSHLLVTFLKSILKSIHDLVSPRPDPTRARSQNSPAQILRSFHNVRNLSIELPSGD 121

Query: 138 FEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMM 197
             +E+  V+KWRA+FG  LR+CVIL F  +    G E   V G D  F  G+K +V+W +
Sbjct: 122 LRLEKGTVLKWRADFGKTLRSCVILGFRSV--VAGGET-PVPGDDADFAGGLKVRVVWTI 181

Query: 198 GALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGG----- 257
            AL+ ASARH+++ EVV E   ++ LVLRDR G GVVVME+  L +  R   C       
Sbjct: 182 SALIAASARHYLLKEVVREQRGLETLVLRDREGEGVVVMEKEGLRECGREDTCDAEEEEE 241

Query: 258 GEAAGRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKED 317
            E  G  + R+R+PS  +RM++ P +E++ G+ +E ATLVVVRP+ +  +        ED
Sbjct: 242 EEEEGWDRGRSRVPSVRMRMRHVPRMELKGGVWVEGATLVVVRPSLSGDV--------ED 301

Query: 318 ADLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
            DLA+ AF  D +Y   V ALL K K +  E+NSF
Sbjct: 302 GDLAMGAFGGDVLYGEVVEALL-KAKSYLLEMNSF 324

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BLAST of CmaCh05G004940.1 vs. NCBI nr
Match: gi|694387863|ref|XP_009369664.1| (PREDICTED: F-box protein At1g22220 [Pyrus x bretschneideri])

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 157/334 (47.01%), Postives = 211/334 (63.17%), Query Frame = 1


Query: 18  DGFDSLPDSLVLLIFNSVCDVKTLIRCRAVSKRFNSLVPHSDSLFLKIDCIISSDSDSDS 77
           DGFD LPDSL+L IF+SV D+KTLIRCRAVSKRFNSLVPH+DSL L +D +ISSDSD DS
Sbjct: 2   DGFDRLPDSLILQIFDSVSDIKTLIRCRAVSKRFNSLVPHTDSLILTVDRVISSDSDCDS 61

Query: 78  DSGPNSHLF-NFFKSTVKSFFYFISS--ILLKSKLQKSPAQILRQFYWIQRLQIEFPTKD 137
           +S   SHL   F KS +KS    +S+     +++ Q SPAQILR F+ ++ L IE P+ D
Sbjct: 62  ESDDVSHLLVAFLKSILKSLQDLVSAKPDPAQTRSQNSPAQILRSFHRVRSLSIELPSGD 121

Query: 138 FEIER--VVKWRAEFGDALRNCVILSFEKIRNSDGREVMEVDGVDFGFVTGMKAKVLWMM 197
             +E+  V+KWRAEFG  L+ CVIL F  +  S    V    G +  F  G+K +V+W +
Sbjct: 122 LRLEKGTVLKWRAEFGKTLKTCVILGFRSVVASGDNPVA---GEEADFAGGLKVRVVWTI 181

Query: 198 GALMTASARHHVMAEVVVEHLEMKNLVLRDRGGNGVVVMEENSLEDFRRSRMCGGGEAA- 257
            AL+ ASARH+++ EVV E   +++LVLRDR G G VVM +  L + RR   CG  E   
Sbjct: 182 SALIAASARHYLLKEVVREQRGLESLVLRDREGEGTVVMRKEGLRECRREDACGEAEEVE 241

Query: 258 ---GRWQMRTRIPSTTVRMKYWPLLEIRQGLCMEDATLVVVRPTGNASIDESTDVEKEDA 317
              G  + R+++PS  +RM++   +E++  + +E ATLVVVRP        S   + ED 
Sbjct: 242 EEEGWDRGRSKVPSVRMRMRHVARVELKGRVWVEGATLVVVRP--------SLGDDVEDG 301

Query: 318 DLALSAFEDDDVYTNAVAALLTKGKRFQFEINSF 343
           DLA+ AF +D +Y   V  LL K K +  E+NSF
Sbjct: 302 DLAMEAFGNDGMYGEVVVELL-KAKSYLLEMNSF 323

The following BLAST results are available for this feature:

BLAST of CmaCh05G004940.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB91_ARATH	1.5e-58	41.64	F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1	[more]
FB303_ARATH	1.3e-52	41.46	F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1	[more]
FB19_ARATH	6.5e-41	33.42	F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1	[more]
FB237_ARATH	4.1e-27	33.33	F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1	[more]
FB285_ARATH	7.0e-27	32.54	F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1	[more]

BLAST of CmaCh05G004940.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN04_CUCSA	2.6e-105	62.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1	[more]
B9H746_POPTR	2.9e-64	46.36	F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1	[more]
M1AK96_SOLTU	6.7e-61	43.11	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1	[more]
K4BTT0_SOLLC	1.1e-60	42.86	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A067KYY1_JATCU	3.3e-60	46.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15769 PE=4 SV=1	[more]

BLAST of CmaCh05G004940.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78100.1	8.7e-60	41.64	F-box family protein	[more]
AT1G22220.1	7.1e-54	41.46	F-box family protein	[more]
AT1G30200.2	3.7e-42	33.42	F-box family protein	[more]
AT4G18380.1	2.3e-28	33.33	F-box family protein	[more]
AT5G46170.1	3.9e-28	32.54	F-box family protein	[more]

BLAST of CmaCh05G004940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089131\|ref\|XP_008445343.1\|	2.7e-111	64.20	PREDICTED: F-box protein At1g22220 [Cucumis melo]	[more]
gi\|778670222\|ref\|XP_004150662.2\|	3.7e-105	62.43	PREDICTED: F-box protein At1g22220 [Cucumis sativus]	[more]
gi\|657942413\|ref\|XP_008374968.1\|	6.9e-67	47.73	PREDICTED: F-box protein At1g22220-like [Malus domestica]	[more]
gi\|645225641\|ref\|XP_008219667.1\|	9.0e-67	48.36	PREDICTED: F-box protein At1g22220 [Prunus mume]	[more]
gi\|694387863\|ref\|XP_009369664.1\|	1.7e-65	47.01	PREDICTED: F-box protein At1g22220 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh05G004940	CmaCh05G004940	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004940.1	CmaCh05G004940.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004940.1.exon.1	CmaCh05G004940.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh05G004940.1.CDS.1	CmaCh05G004940.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 21..61 score: 7.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 23..64 score: 0.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 9..69 score: 1.
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 14..66 score: 6.
None	No IPR available	PANTHER	PTHR31215	FAMILY NOT NAMED	coord: 1..342 score: 2.2E
None	No IPR available	PANTHER	PTHR31215:SF6	SUBFAMILY NOT NAMED	coord: 1..342 score: 2.2E