CmaCh05G000970.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh05G000970.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr05 : 419155 .. 421943 (+)
Sequence length321
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACATCATTTTCTGCTGGAGGAGTCAAATTCTGGGCTGCTTATCATCCCCCATGTGCAAGTGAAGTCGATTGAACCAATCTGTATATTTCATGTTTTTCTAGCATCATATAAAAGCGTGTCCAGAATCATTTTTTGTTACACTCAACTGACCTTTAGATATGGAAAAATCAGATAGAGGAACTGTGGGGCCAGTACTGTAGAGGAACTACTATTGTATTTGTCTTCACTATGAGCTGATTCTTTGTAAAATGTATTATAGTTTGGATATTTATAATGAAATTGGTACCCTCCAAAATGATCACTTTGCTGTTTCTTTTTTGCAGTGCCAATATTGATTTTTACCAAGTTGTCACCTTCAAGACTCTTCATCAGATGGTCATCAGCGAAAAAAAGGTCCAAGCTGTAAGTCCATCGATTCCCACCCCCCACCCCCACTAAACACAAATTTTAAATCATGGAGTTTGAAAATTCAGATATCAAAACAGGTAGCTGAATAAATAAATGATCCTGAAGCACGTGAACTCTCATAAACTAGTTGAGTTACACACATAACCTATGATAATACTTCAATTCATGCATTTTGGGCCGGGCTGTGAGAGCCCTCGGCCGATTTCACAAGTGATAAATGGGCCACTTTTAAACTAATGGGCTTGGATAAGTAGTATGGCGCAACTGGGCTACATTATACAATATGGGCCAGACAGTAGTTTTGCGATAATGGCACTCTTGTAATTTATGCAGAGAACAGGGGTGAATTCGTATACATCATAAAATCGGGACGCCAATATATATACAAATATTTTTTTCGTTTAAAGGACACAATCATTATTTTTTTTTTAATCTTAATACAACTCAACTAGTTAACACTTATCATGGATGAATATTCAAATTCAGAAACTAAAAAAATAAATCTTCAAAAGTACTTAGAATGTGTGATTTCAAAAGTAATTTTATGTTTTTTAAATAAAATATCTTAGATTAAATTTTTTGTTAAATTATACTGTGAATGAATTTTTATGTTAGTATAAATTAGTGATGTTTAAAAAATACTTAATAGATTCTTAATTTTTTAAACTTATATCTAGTATGCTTAAATTAAAAATGGCATACTCCTAATTTCTGATTTCTTTTTTGGCAATTTAAGTTAATAAATCTAGGTCAACGTTCATTATTTGTGATATTATTTAGTAAATTGGGTTTGATATTAAAATGCACAATTAATATTGAATTTAAAAGAAAAATACCGCGTTTTGGTTGATGGGTGTTTGTGTCTTTTCAACTGAGCACGCACTGTGTCTGAGTCATGAGAAGGTCCGGATATTGGTCACCCACCTTGGGACCTCTCTCTGAATCCGATTGCGAAGCTGTCACGAGGTTTCTCAACTTGTCCAATTTTGGGCGAATTGAGTTGCTTTAATCATGCGGTCGAAATTCATCCATGTTCAAAGAAAAACGTCCCCAAAACCCTTTTCTGCGTCAAAATTGTTTGCTTCTACGACTGAAGCCCAGTTTGTGGGTTCTGAATTACACAAAAAACCGAACATTAGTAGAGAAGAAAAGGTAGCACTCAGTATTCCCTTTTAGTAGTACGAAGGGCTACGAGACATTGAATTTGAACTCTTCTTTTTCTTTTTCTTTTTCTCTGCAGTGTCCATTGGCAGCATTTCTCTGTTTGGGTTTGCAGGCAACCAAGCAAGTAGCAGCAGACCCCACACCCCCCGATTTTTCACACTCAACCATGTGGTAATGGTAAGAAAATTTCATATATTTTACTGTCAATTTCTCTGAGTTTTTCCTTTTTCTTTTTTGTCATTGTGCTGTCAAACACCTTTGCTCTTTGAAATCAATCTCGAGCTTTGAGTTACTTCACCATCCTACGTGGAAGCTGAATGATAATTACACTTGAGTTTAATGAATGTACTGTCTTTTCTCTTTAATCCTTTCAAGAACCGTACTCTTTGAAGCATATTTTGTCCATTAACTCTCGCGTTAGGGACACCCTTCTCTTCCTTTCTTACTTGGGTAATCATTAAAACCCCACTTTGTAAGAGAGAGGGGTCTGACTTCAGAGCGACAATTGGGATGCTTACAAATTAAGCCCATTAAATGGTTTCACTTACCAAGCCTGCAGTGCAGAGAAAAGGCAGAACCCACAAGGCATTCTCTCGAGTAACAGCCCGATGGAGGAGTTGCTCGAGCATTGAGGTTGTAGGTCCACATTATTTCCTTTGGTTATTTCTGGTTATTACCCAAATCCCATTATAGCTTCTTGGTCAGAGCTCAAAAGAAGATCAGAGAAAAGATTTAGACAATGGTGGAAAAAGTGGGGTTGTATCACCTCAGATCCAATGGCAGAGCTCTAGATTTAAGAATTGATTGCATTGTTTCATCACCATGTTGTTACTTAATGGATAACCATTATGGTTCGAACATGAGCATTAGGGTCACTCTCATAATCCAAGAAGTACATATAGCCAAAACAAGCAGATGGGTATTGGTTTATTGCGACTTGCAGCCATTAAATTCGTCAAAGATATCCCACAGGATTTTCTCGTCAGTTTGGGTTTGCTTGCATCATCATTTTCAGGCTCTTTTCTCTCCCTTTAAACTCTGAGACTATAACTGTTCAAAAGTACACTGGTGAAACAGTAAAGTTTCTCTCTTTTTCACATTTGATTGCCTTTAAGTTGTTTGTTGTTTGATTCTGAAGAAAAAGTGTGATGCATAGTTCCTTTATTTGCTCTTGCATCTCATCACTTTGGTTTTCTTGTTCAGTATAGCTAA

mRNA sequence

ATGAAACATCATTTTCTGCTGGAGGAGTCAAATTCTGGGCTGCTTATCATCCCCCATGTGCAAGTGAAGTCGATTGAACCAATCTGTATATTTCATGTTTTTCTAGCATCATATAAAAGCGTTGCCAATATTGATTTTTACCAAGTTGTCACCTTCAAGACTCTTCATCAGATGGTCATCAGCGAAAAAAAGGTCCAAGCTAGAAGAAAAGTGTCCATTGGCAGCATTTCTCTGTTTGGGTTTGCAGGCAACCAAGCAAGTAGCAGCAGACCCCACACCCCCCGATTTTTCACACTCAACCATGTGGTAATGTATAGCTAA

Coding sequence (CDS)

ATGAAACATCATTTTCTGCTGGAGGAGTCAAATTCTGGGCTGCTTATCATCCCCCATGTGCAAGTGAAGTCGATTGAACCAATCTGTATATTTCATGTTTTTCTAGCATCATATAAAAGCGTTGCCAATATTGATTTTTACCAAGTTGTCACCTTCAAGACTCTTCATCAGATGGTCATCAGCGAAAAAAAGGTCCAAGCTAGAAGAAAAGTGTCCATTGGCAGCATTTCTCTGTTTGGGTTTGCAGGCAACCAAGCAAGTAGCAGCAGACCCCACACCCCCCGATTTTTCACACTCAACCATGTGGTAATGTATAGCTAA

Protein sequence

MKHHFLLEESNSGLLIIPHVQVKSIEPICIFHVFLASYKSVANIDFYQVVTFKTLHQMVISEKKVQARRKVSIGSISLFGFAGNQASSSRPHTPRFFTLNHVVMYS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh05G000970CmaCh05G000970gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh05G000970.1CmaCh05G000970.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G000970.1.exon.5CmaCh05G000970.1.exon.5exon
CmaCh05G000970.1.exon.4CmaCh05G000970.1.exon.4exon
CmaCh05G000970.1.exon.3CmaCh05G000970.1.exon.3exon
CmaCh05G000970.1.exon.2CmaCh05G000970.1.exon.2exon
CmaCh05G000970.1.exon.1CmaCh05G000970.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G000970.1.CDS.1CmaCh05G000970.1.CDS.1CDS
CmaCh05G000970.1.CDS.2CmaCh05G000970.1.CDS.2CDS
CmaCh05G000970.1.CDS.3CmaCh05G000970.1.CDS.3CDS
CmaCh05G000970.1.CDS.4CmaCh05G000970.1.CDS.4CDS
CmaCh05G000970.1.CDS.5CmaCh05G000970.1.CDS.5CDS